Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= R09E10_8
(909 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|17541852|ref|NP_501895.1| putative nuclear protein, with a co... 554 e-156
gi|34555941|emb|CAA94302.3| Hypothetical protein R09E10.1 [Caeno... 539 e-152
gi|25375107|pir||H88808 protein R09E10.1 [imported] - Caenorhabd... 522 e-151
gi|17531935|ref|NP_495082.1| predicted CDS, putative protein, wi... 461 e-139
gi|39596916|emb|CAE59143.1| Hypothetical protein CBG02447 [Caeno... 275 5e-79
gi|46445421|gb|EAL04690.1| hypothetical protein CaO19.12361 [Can... 41 0.042
gi|49900531|gb|AAH76555.1| Unknown (protein for IMAGE:7044154) [... 39 0.16
gi|205680|gb|AAA41692.1| high molecular weight neurofilament 38 0.27
gi|23613038|ref|NP_703360.1| interspersed repeat antigen, putati... 38 0.36
gi|7495728|pir||T15468 hypothetical protein C09B9.3 - Caenorhabd... 37 0.47
gi|17538596|ref|NP_500706.1| putative membrane protein, family 8... 37 0.47
gi|27673519|ref|XP_236851.1| similar to futsch CG3064-PB [Rattus... 37 0.61
gi|50510845|dbj|BAD32408.1| mKIAA1205 protein [Mus musculus] 37 0.61
gi|35193071|gb|AAH58674.1| BC058674 protein [Mus musculus] 37 0.61
gi|46445394|gb|EAL04663.1| hypothetical protein CaO19.12334 [Can... 37 0.61
gi|46445590|gb|EAL04858.1| hypothetical protein CaO19.4870 [Cand... 37 0.61
gi|12654247|gb|AAH00943.1| Unknown (protein for IMAGE:3448011) [... 36 1.0
gi|3336978|emb|CAA18536.1| dJ511B24.1 (Topoisomerase (DNA) I) [H... 36 1.0
gi|28948850|pdb|1NH3|A Chain A, Human Topoisomerase I Ara-C Complex 36 1.0
gi|68486|pir||ISHUT1 DNA topoisomerase (EC 5.99.1.2) - human >gn... 36 1.0
gi|11225260|ref|NP_003277.1| DNA topoisomerase I; type I DNA top... 36 1.0
gi|27065157|pdb|1K4S|A Chain A, Human Dna Topoisomerase I In Cov... 36 1.0
gi|3659924|pdb|1A36|A Chain A, Human Dna Topoisomerase I (70 Kda... 36 1.0
gi|40889577|pdb|1R49|A Chain A, Human Topoisomerase I (Topo70) D... 36 1.0
gi|41056366|emb|CAA34500.2| topoisomerase I [Homo sapiens] 36 1.0
gi|48096483|ref|XP_392467.1| similar to ENSANGP00000012259 [Apis... 36 1.0
gi|50513401|pdb|1RRJ|A Chain A, Structural Mechanisms Of Camptot... 36 1.0
gi|323062|pir||A45112 major paraflagellar rod component PAR 2 - ... 36 1.0
gi|38503303|sp|Q7YR26|TOP1_CERAE DNA topoisomerase I >gnl|BL_ORD... 36 1.0
gi|23200355|pdb|1LPQ|A Chain A, Human Dna Topoisomerase I (70 Kd... 36 1.0
gi|473581|gb|AAB60379.1| DNA topoisomerase I 36 1.0
gi|473583|gb|AAB60380.1| DNA topoisomerase I 36 1.0
gi|31203701|ref|XP_310799.1| ENSANGP00000014877 [Anopheles gambi... 36 1.4
gi|31746683|gb|AAP68958.1| Uncoordinated protein 89, isoform b [... 36 1.4
gi|1160355|gb|AAB00542.1| UNC-89 36 1.4
gi|25141314|ref|NP_491290.2| UNCoordinated locomotion UNC-89, PH... 36 1.4
gi|172574|gb|AAB63976.1| SEN1 [Saccharomyces cerevisiae] 36 1.4
gi|31203703|ref|XP_310800.1| ENSANGP00000022688 [Anopheles gambi... 36 1.4
gi|6323462|ref|NP_013534.1| Nuclear protein, putative helicase r... 36 1.4
gi|2340994|gb|AAB67523.1| Sen1p [Saccharomyces cerevisiae] 36 1.4
gi|50513398|pdb|1RR8|C Chain C, Structural Mechanisms Of Camptot... 36 1.4
gi|23613635|ref|NP_704656.1| hypothetical protein [Plasmodium fa... 36 1.4
gi|7511618|pir||T29757 protein UNC-89 - Caenorhabditis elegans 36 1.4
gi|2118971|pir||I51227 histone H1A - African clawed frog >gnl|BL... 35 1.8
gi|21429606|gb|AAM49796.1| heavy neurofilament NF-H [Rattus norv... 35 1.8
gi|6678399|ref|NP_033434.1| topoisomerase (DNA) I [Mus musculus]... 35 1.8
gi|205686|gb|AAA41695.1| heavy neurofilament subunit 35 1.8
gi|15895475|ref|NP_348824.1| Hypothetical protein CAC2207 [Clost... 35 1.8
gi|1083177|pir||A49546 DNA topoisomerase (EC 5.99.1.2) - Chinese... 35 1.8
gi|418112|sp|Q04750|TOP1_MOUSE DNA topoisomerase I >gnl|BL_ORD_I... 35 1.8
gi|586107|sp|Q07050|TOP1_CRIGR DNA topoisomerase I >gnl|BL_ORD_I... 35 1.8
gi|45382587|ref|NP_990577.1| claustrin [Gallus gallus] >gnl|BL_O... 35 2.3
gi|27374349|gb|AAO01090.1| RhoGAP92B-PA [Drosophila willistoni] 35 2.3
gi|47567195|ref|ZP_00237909.1| phage infection protein, putative... 35 2.3
gi|38104173|gb|EAA50784.1| hypothetical protein MG04543.4 [Magna... 35 2.3
gi|462702|sp|P16884|NFH_RAT Neurofilament triplet H protein (200... 35 2.3
gi|39597669|emb|CAE68360.1| Hypothetical protein CBG14099 [Caeno... 35 2.3
gi|29789026|ref|NP_036739.1| neurofilament, heavy polypeptide [R... 35 2.3
gi|50756763|ref|XP_415310.1| PREDICTED: similar to heavy neurofi... 35 2.3
gi|20806787|ref|NP_621958.1| ATPase involved in DNA repair [Ther... 35 2.3
gi|129883|sp|P22225|PFR1_TRYBB 69 kDa paraflagellar rod protein ... 35 2.3
gi|463287|gb|AAA30220.1| paraflagellar rod protein [Trypanosoma ... 35 2.3
gi|38078060|ref|XP_149413.3| RIKEN cDNA A730019I05 gene [Mus mus... 35 2.3
gi|30468235|ref|NP_849122.1| ATP synthase CF0 B' chain [Cyanidio... 35 3.0
gi|1495186|emb|CAA45848.1| HA receptor for hyaluronic acid [Mus ... 35 3.0
gi|34856059|ref|XP_341853.1| similar to KIAA1205 protein [Rattus... 35 3.0
gi|47209921|emb|CAF94661.1| unnamed protein product [Tetraodon n... 35 3.0
gi|39590658|emb|CAE65028.1| Hypothetical protein CBG09866 [Caeno... 35 3.0
gi|13591886|ref|NP_112257.1| microtubule-associated protein 1 A;... 35 3.0
gi|7305145|ref|NP_038580.1| hyaluronan mediated motility recepto... 35 3.0
gi|47522752|ref|NP_999126.1| optineurin [Sus scrofa] >gnl|BL_ORD... 35 3.0
gi|31193908|gb|AAP44743.1| putative heavy-metal-associated prote... 35 3.0
gi|38086449|ref|XP_203293.2| similar to hypothetical protein BC0... 35 3.0
gi|39591745|emb|CAE71323.1| Hypothetical protein CBG18220 [Caeno... 35 3.0
gi|28210490|ref|NP_781434.1| putative surface/cell-adhesion prot... 35 3.0
gi|37528650|ref|NP_931995.1| hypothetical protein [Photorhabdus ... 35 3.0
gi|1495187|emb|CAA45849.1| HA receptor for hyaluronic acid [Mus ... 35 3.0
gi|1203830|gb|AAB17719.1| paraflagellar rod protein 2C 34 4.0
gi|9954905|pdb|1EJ9|A Chain A, Crystal Structure Of Human Topois... 34 4.0
gi|902464|gb|AAB60141.1| membrane protein 34 4.0
gi|46444636|gb|EAL03909.1| hypothetical protein CaO19.4574 [Cand... 34 4.0
gi|38344553|emb|CAD40958.2| OSJNBa0027P08.21 [Oryza sativa (japo... 34 4.0
gi|15899683|ref|NP_344288.1| Quinol oxidase-2, subunit I/III, cy... 34 4.0
gi|92538|pir||S02003 neurofilament triplet H protein - rat (frag... 34 4.0
gi|24653978|ref|NP_725510.1| CG18255-PD [Drosophila melanogaster... 34 5.2
gi|24020878|gb|AAN40837.1| heavy neurofilament protein [Canis fa... 34 5.2
gi|26247582|ref|NP_753622.1| TonB protein [Escherichia coli CFT0... 34 5.2
gi|11277479|pir||T45505 membrane protein [imported] - Escherichi... 34 5.2
gi|24653966|ref|NP_725506.1| CG18255-PA [Drosophila melanogaster... 34 5.2
gi|23490091|gb|EAA21948.1| homeobox-containing protein [Plasmodi... 34 5.2
gi|30681829|ref|NP_850032.1| expressed protein [Arabidopsis thal... 34 5.2
gi|14250426|gb|AAH08648.1| Unknown (protein for IMAGE:3866238) [... 33 6.7
gi|32418170|ref|XP_329563.1| hypothetical protein [Neurospora cr... 33 6.7
gi|38100350|gb|EAA47487.1| hypothetical protein MG02730.4 [Magna... 33 6.7
gi|39579837|emb|CAE56846.1| Hypothetical protein CBG24673 [Caeno... 33 6.7
gi|12711598|gb|AAK01919.1| monoclonal antibody 3H11 antigen [Hom... 33 6.7
gi|33302611|sp|P12036|NFH_HUMAN Neurofilament triplet H protein ... 33 6.7
gi|23577825|ref|NP_703056.1| unknown [Rachiplusia ou multiple nu... 33 6.7
gi|8571370|gb|AAF76851.1| Kruppel family member GLI3 [Coturnix c... 33 6.7
gi|27529742|dbj|BAA74868.2| KIAA0845 protein [Homo sapiens] 33 6.7
gi|42761448|ref|NP_976293.1| hypothetical protein [Bacillus thur... 33 6.7
gi|50428640|gb|AAT76991.1| putative centromere protein [Oryza sa... 33 6.7
gi|50426497|ref|XP_461845.1| unnamed protein product [Debaryomyc... 33 6.7
gi|71549|pir||QFHUH neurofilament triplet H protein - human >gnl... 33 6.7
gi|32483416|ref|NP_066554.2| neurofilament, heavy polypeptide 20... 33 6.7
gi|38106086|gb|EAA52437.1| hypothetical protein MG05129.4 [Magna... 33 6.7
gi|13376689|ref|NP_079390.1| hypothetical protein FLJ13615 [Homo... 33 6.7
gi|45384402|ref|NP_990272.1| chromo-helicase-DNA-binding on the ... 33 6.7
gi|32404160|ref|XP_322693.1| hypothetical protein [Neurospora cr... 33 6.7
gi|46431856|gb|EAK91379.1| hypothetical protein CaO19.7818 [Cand... 33 8.8
gi|49903364|gb|AAH76719.1| LOC398539 protein [Xenopus laevis] 33 8.8
gi|121922|sp|P06893|H1B_XENLA HISTONE H1B >gnl|BL_ORD_ID|544050 ... 33 8.8
gi|50548667|ref|XP_501803.1| hypothetical protein [Yarrowia lipo... 33 8.8
gi|30315076|gb|AAP30767.1| putative gland protein G21E12 [Hetero... 33 8.8
gi|30315074|gb|AAP30766.1| putative gland protein G30D08 [Hetero... 33 8.8
gi|2133786|pir||I51116 NF-180 - sea lamprey >gnl|BL_ORD_ID|32563... 33 8.8
gi|27803074|emb|CAD60777.1| unnamed protein product [Podospora a... 33 8.8
gi|39592294|emb|CAE75515.1| Hypothetical protein CBG23530 [Caeno... 33 8.8
gi|27503180|gb|AAH42300.1| LOC398539 protein [Xenopus laevis] 33 8.8
gi|46128147|ref|XP_388627.1| hypothetical protein FG08451.1 [Gib... 33 8.8
gi|15425681|dbj|BAB64297.1| I-connectin [Procambarus clarkii] 33 8.8
gi|70670|pir||HSXL1B histone H1B - African clawed frog 33 8.8
gi|45184817|ref|NP_982535.1| AAL007Cp [Eremothecium gossypii] >g... 33 8.8
>gi|17541852|ref|NP_501895.1| putative nuclear protein, with a
coiled coil-4 domain (4L84) [Caenorhabditis elegans]
gi|7506518|pir||T24091 hypothetical protein R09E10.1 -
Caenorhabditis elegans
Length = 302
Score = 554 bits (1427), Expect = e-156
Identities = 285/302 (94%), Positives = 285/302 (94%)
Frame = -1
Query: 909 MVMFSRTQMTSPDEHSPEKKDSENEVVPAGPKQKAKCLEKETKSPPKPSDLSKAERKEKN 730
MVMFSRTQMTSPDEHSPEKKDSENEVVPAGPKQKAKCLEKETKSPPKPSDLSKAERKEKN
Sbjct: 1 MVMFSRTQMTSPDEHSPEKKDSENEVVPAGPKQKAKCLEKETKSPPKPSDLSKAERKEKN 60
Query: 729 NKTARRDVKSSRGNVKTMKPXXXXXXXXXXXXXXXXXEGKLKNFSLPKDEPEITALQLDA 550
NKTARRDVKSSRGNVKTMKP EGKLKNFSLPKDEPEITALQLDA
Sbjct: 61 NKTARRDVKSSRGNVKTMKPSVVKVEERSSRSKKSIREGKLKNFSLPKDEPEITALQLDA 120
Query: 549 ELTKSARLMEEYKIALEQIITTLVSMMRRGNGTVDMENIVSDKGQTAAEKLNKEVQLTQN 370
ELTKSARLMEEYKIALEQIITTLVSMMRRGNGTVDMENIVSDKGQTAAEKLNKEVQLTQN
Sbjct: 121 ELTKSARLMEEYKIALEQIITTLVSMMRRGNGTVDMENIVSDKGQTAAEKLNKEVQLTQN 180
Query: 369 YWKTDTKLQPAMNDAIAKNTVVLAAAERNLQTQGPQHLKRVKKFLYGQYPKYVDMKRDLL 190
YWKTDTKLQPAMNDAIAKNTVVLAAAERNLQTQGPQHLKRVKKFLYGQYPKYVDMKRDLL
Sbjct: 181 YWKTDTKLQPAMNDAIAKNTVVLAAAERNLQTQGPQHLKRVKKFLYGQYPKYVDMKRDLL 240
Query: 189 KIVKQQKPEAQSVRDESAQAISKFIKEKYVNAKIYASRRNSKCFRRVELFPSYIRFYLAS 10
KIVKQQKPEAQSVRDESAQAISKFIKEKYVNAKIYASRRNSKCFRRVELFPSYIRFYLAS
Sbjct: 241 KIVKQQKPEAQSVRDESAQAISKFIKEKYVNAKIYASRRNSKCFRRVELFPSYIRFYLAS 300
Query: 9 NR 4
NR
Sbjct: 301 NR 302