Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= R03H10_1
(1149 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|17535417|ref|NP_494728.1| putative endoplasmic reticulum prot... 624 e-177
gi|39582812|emb|CAE74275.1| Hypothetical protein CBG21967 [Caeno... 584 e-165
gi|7506226|pir||T16669 hypothetical protein R03H10.2 - Caenorhab... 273 4e-72
gi|7506227|pir||T16668 hypothetical protein R03H10.3 - Caenorhab... 196 7e-49
gi|32564929|ref|NP_872017.1| putative endoplasmic reticulum prot... 39 0.30
gi|17532019|ref|NP_493651.1| putative endoplasmic reticulum prot... 39 0.30
gi|39586883|emb|CAE62818.1| Hypothetical protein CBG06997 [Caeno... 37 0.66
gi|21699068|ref|NP_660113.1| pitrilysin metalloprotease 1; nucle... 37 1.1
gi|34876301|ref|XP_225517.2| similar to nuclear transplantation ... 37 1.1
gi|13905240|gb|AAH06917.1| Pitrm1 protein [Mus musculus] 37 1.1
gi|37360248|dbj|BAC98102.1| mKIAA1104 protein [Mus musculus] 37 1.1
gi|39587513|emb|CAE58451.1| Hypothetical protein CBG01588 [Caeno... 36 1.5
gi|49077126|ref|XP_402463.1| hypothetical protein UM04848.1 [Ust... 36 1.5
gi|39653657|gb|AAR29367.1| acetylcholine receptor delta subunit ... 35 2.5
gi|38683742|gb|AAR26918.1| FirrV-1-B43 precursor [Feldmannia irr... 32 3.2
gi|27469020|ref|NP_765657.1| PTS enzyme II glucose-specific fact... 35 4.3
gi|113090|sp|P02718|ACHD_TORCA Acetylcholine receptor protein, d... 34 5.6
gi|33357673|pdb|1OED|C Chain C, Structure Of Acetylcholine Recep... 34 5.6
gi|46110244|ref|XP_382180.1| hypothetical protein FG02004.1 [Gib... 34 7.3
>gi|17535417|ref|NP_494728.1| putative endoplasmic reticulum protein,
with at least 3 transmembrane domains (42.6 kD) (2E457)
[Caenorhabditis elegans]
gi|9802998|gb|AAG00006.1| Hypothetical protein R03H10.2
[Caenorhabditis elegans]
Length = 382
Score = 624 bits (1609), Expect = e-177
Identities = 319/382 (83%), Positives = 319/382 (83%)
Frame = +1
Query: 1 MDFDFDSEXXXXXXXXXXXXIRTVSNNPKVTFKGAQTWRESVGMFXXXXXXXXXXXXXXX 180
MDFDFDSE IRTVSNNPKVTFKGAQTWRESVGMF
Sbjct: 1 MDFDFDSEPKTPPQLPPAPPIRTVSNNPKVTFKGAQTWRESVGMFLVMALALAVAISSLV 60
Query: 181 XXCYVWKDKQVYDHIVDFLDKTIQISKIAERPFLGVYQLSEKELEVLGNERTYKWFLRGY 360
CYVWKDKQVYDHIVDFLDKTIQISKIAERPFLGVYQLSEKELEVLGNERTYKWFLRGY
Sbjct: 61 LLCYVWKDKQVYDHIVDFLDKTIQISKIAERPFLGVYQLSEKELEVLGNERTYKWFLRGY 120
Query: 361 LLSEXXXXXXXXXXXXXXXXXDISGGKARVVFWLVLATGILYAVVPIHVFTFVLMPYSNM 540
LLSE DISGGKARVVFWLVLATGILYAVVPIHVFTFVLMPYSNM
Sbjct: 121 LLSELGVFFFIFLASFLYFCFDISGGKARVVFWLVLATGILYAVVPIHVFTFVLMPYSNM 180
Query: 541 LPNATEKILNHAIPHNVGGIQQMEIGLGCTFDLNLYAANRRKLNPNNTCDPQIDSSFIPI 720
LPNATEKILNHAIPHNVGGIQQMEIGLGCTFDLNLYAANRRKLNPNNTCDPQIDSSFIPI
Sbjct: 181 LPNATEKILNHAIPHNVGGIQQMEIGLGCTFDLNLYAANRRKLNPNNTCDPQIDSSFIPI 240
Query: 721 YMLIGLLVIRLLPIVLGVLLAVKKTPLSEGVAQLVEKLRKGEKRRLYVKKQQRTTTTFDG 900
YMLIGLLVIRLLPIVLGVLLAVKKTPLSEGVAQLVEKLRKGEKRRLYVKKQQRTTTTFDG
Sbjct: 241 YMLIGLLVIRLLPIVLGVLLAVKKTPLSEGVAQLVEKLRKGEKRRLYVKKQQRTTTTFDG 300
Query: 901 EHVSKSTTFGVDGTPPRITSTPLPPVPSPAQIDHSISYNNAAYFATXXXXXXXXXXXXXX 1080
EHVSKSTTFGVDGTPPRITSTPLPPVPSPAQIDHSISYNNAAYFAT
Sbjct: 301 EHVSKSTTFGVDGTPPRITSTPLPPVPSPAQIDHSISYNNAAYFATSGAFSSRSSDISRI 360
Query: 1081 XXXELFKNPINRAPSGSLQSEV 1146
ELFKNPINRAPSGSLQSEV
Sbjct: 361 DASELFKNPINRAPSGSLQSEV 382