Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= M88_3
(687 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|17554282|ref|NP_497919.1| mitochondrial ribosomal protein S34... 470 e-131
gi|39591612|emb|CAE71189.1| Hypothetical protein CBG18046 [Caeno... 438 e-122
gi|25342761|pir||B88431 protein M88.2 [imported] - Caenorhabditi... 396 e-109
gi|48098273|ref|XP_392037.1| similar to ENSANGP00000021844 [Apis... 66 7e-10
gi|13385670|ref|NP_075749.1| mitochondrial ribosomal protein S34... 65 2e-09
gi|12840821|dbj|BAB24970.1| unnamed protein product [Mus musculus] 65 2e-09
gi|13027604|ref|NP_076425.1| mitochondrial ribosomal protein S34... 63 6e-09
gi|34870537|ref|XP_213234.2| similar to TCE2 [Rattus norvegicus] 62 1e-08
gi|24665233|ref|NP_524104.2| CG13037-PA [Drosophila melanogaster... 59 7e-08
gi|31199711|ref|XP_308803.1| ENSANGP00000021844 [Anopheles gambi... 59 9e-08
gi|49522347|gb|AAH75342.1| Unknown (protein for MGC:89027) [Xeno... 58 2e-07
gi|28302183|gb|AAH46672.1| Mrps34-prov protein [Xenopus laevis] 55 2e-06
gi|47219605|emb|CAG02650.1| unnamed protein product [Tetraodon n... 47 5e-04
gi|50808495|ref|XP_424592.1| PREDICTED: similar to Mrps34-prov p... 45 0.001
gi|48866277|ref|ZP_00320133.1| COG3444: Phosphotransferase syste... 36 0.82
gi|38092069|ref|XP_109770.2| similar to eukaryotic translation e... 33 5.3
gi|42661985|ref|XP_058967.9| similar to Elongation factor 1-delt... 33 5.3
gi|42520312|ref|NP_966227.1| ankyrin repeat domain protein [Wolb... 32 9.1
>gi|17554282|ref|NP_497919.1| mitochondrial ribosomal protein S34
(26.3 kD) (3F630) [Caenorhabditis elegans]
gi|7506135|pir||T23838 hypothetical protein M88.2 - Caenorhabditis
elegans
gi|5824553|emb|CAA84334.2| Hypothetical protein M88.2
[Caenorhabditis elegans]
Length = 228
Score = 470 bits (1209), Expect = e-131
Identities = 228/228 (100%), Positives = 228/228 (100%)
Frame = -1
Query: 687 MSSNLIRFVGNHDIASEGKFLFEILSQLRNFGVGRLVTKNEWTRKWPNNPSYMKILRAEP 508
MSSNLIRFVGNHDIASEGKFLFEILSQLRNFGVGRLVTKNEWTRKWPNNPSYMKILRAEP
Sbjct: 1 MSSNLIRFVGNHDIASEGKFLFEILSQLRNFGVGRLVTKNEWTRKWPNNPSYMKILRAEP 60
Query: 507 GMDRWLFEGKVYAEWVFRGKNLGVYEFSKDLNRSDWQLVHKHQEKSYTSSTTPMQDLVLP 328
GMDRWLFEGKVYAEWVFRGKNLGVYEFSKDLNRSDWQLVHKHQEKSYTSSTTPMQDLVLP
Sbjct: 61 GMDRWLFEGKVYAEWVFRGKNLGVYEFSKDLNRSDWQLVHKHQEKSYTSSTTPMQDLVLP 120
Query: 327 DSFPLPPLQVHLSQKSARKNGLDEKTVSRRAPLTLSVDPEFQHLKPFIKQEAPSTKSVSI 148
DSFPLPPLQVHLSQKSARKNGLDEKTVSRRAPLTLSVDPEFQHLKPFIKQEAPSTKSVSI
Sbjct: 121 DSFPLPPLQVHLSQKSARKNGLDEKTVSRRAPLTLSVDPEFQHLKPFIKQEAPSTKSVSI 180
Query: 147 YEEVDKNALLDLYGNELPVKVEAWNAGPAMFQPRFNATTMRVEEQPPK 4
YEEVDKNALLDLYGNELPVKVEAWNAGPAMFQPRFNATTMRVEEQPPK
Sbjct: 181 YEEVDKNALLDLYGNELPVKVEAWNAGPAMFQPRFNATTMRVEEQPPK 228