Homology by BLASTX


BLASTX 2.2.4 [Aug-26-2002]
Query= K10D3_4
         (984 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|17509351|ref|NP_492019.1| TBP-Associated transcription Factor...   537   e-151
gi|17570127|ref|NP_508727.1| TBP-Associated transcription Factor...   158   2e-37
gi|39597854|emb|CAE68546.1| Hypothetical protein CBG14378 [Caeno...   153   5e-36
gi|39588054|emb|CAE57286.1| Hypothetical protein CBG00192 [Caeno...   114   4e-24
gi|12835252|dbj|BAB23203.1| unnamed protein product [Mus musculus]     92   2e-17
gi|6650834|gb|AAF22038.1| PRO2134 [Homo sapiens]                       92   2e-17
gi|27674899|ref|XP_220843.1| similar to TAF11 RNA polymerase II,...    92   2e-17
gi|30794436|ref|NP_081112.1| TAF11 RNA polymerase II, TATA box b...    92   2e-17
gi|27704824|ref|XP_228026.1| similar to TAF11 RNA polymerase II,...    92   2e-17
gi|5032151|ref|NP_005634.1| TBP-associated factor 11; TAF11 RNA ...    92   2e-17
gi|48096147|ref|XP_394618.1| similar to ENSANGP00000021707 [Apis...    92   2e-17
gi|50760443|ref|XP_418024.1| PREDICTED: similar to Transcription...    92   2e-17
gi|50540162|ref|NP_001002548.1| zgc:92784 [Danio rerio] >gnl|BL_...    89   1e-16
gi|47229288|emb|CAG04040.1| unnamed protein product [Tetraodon n...    89   2e-16
gi|24583119|ref|NP_723484.1| CG4079-PA [Drosophila melanogaster]...    88   3e-16
gi|31213157|ref|XP_315522.1| ENSANGP00000021707 [Anopheles gambi...    87   6e-16
gi|5542110|pdb|1BH8|B Chain B, Htafii18HTAFII28 HETERODIMER CRYS...    85   2e-15
gi|32565697|ref|NP_499315.2| TBP-Associated transcription Factor...    83   8e-15
gi|25316525|pir||D86333 T20H2.22 protein - Arabidopsis thaliana ...    82   2e-14
gi|15223727|ref|NP_173429.1| transcription initiation factor IID...    82   2e-14
gi|27479023|ref|XP_210642.1| similar to Transcription initiation...    79   2e-13
gi|41195542|ref|XP_373056.1| similar to Transcription initiation...    77   8e-13
gi|41147164|ref|XP_373076.1| similar to TAF11 RNA polymerase II,...    75   2e-12
gi|41195548|ref|XP_373058.1| similar to Transcription initiation...    74   5e-12
gi|39591877|emb|CAE71455.1| Hypothetical protein CBG18373 [Caeno...    74   5e-12
gi|41147166|ref|XP_373077.1| similar to Transcription initiation...    74   7e-12
gi|41147134|ref|XP_373061.1| similar to Transcription initiation...    73   9e-12
gi|41195545|ref|XP_373057.1| similar to Transcription initiation...    73   1e-11
gi|20543128|ref|XP_116384.1| similar to Transcription initiation...    73   1e-11
gi|42657350|ref|XP_377875.1| similar to Transcription initiation...    73   1e-11
gi|41147162|ref|XP_373075.1| similar to Transcription initiation...    73   1e-11
gi|15235369|ref|NP_193761.1| transcription initiation factor IID...    72   3e-11
gi|41147168|ref|XP_373078.1| similar to Transcription initiation...    69   2e-10
gi|19114403|ref|NP_593491.1| putative transcription initiation f...    67   6e-10
gi|7447999|pir||T05336 hypothetical protein F1C12.195 - Arabidop...    66   1e-09
gi|19074044|ref|NP_584650.1| TRANSCRIPTION INITIATION FACTOR TFI...    64   5e-09
gi|50553334|ref|XP_504078.1| hypothetical protein [Yarrowia lipo...    62   3e-08
gi|50422059|ref|XP_459591.1| unnamed protein product [Debaryomyc...    55   2e-06
gi|46434097|gb|EAK93516.1| hypothetical protein CaO19.14185 [Can...    53   9e-06
gi|50303273|ref|XP_451578.1| unnamed protein product [Kluyveromy...    52   2e-05
gi|34911174|ref|NP_916934.1| B1144G04.34 [Oryza sativa (japonica...    52   3e-05
gi|46122951|ref|XP_386029.1| hypothetical protein FG05853.1 [Gib...    49   2e-04
gi|45188052|ref|NP_984275.1| ADR179Cp [Eremothecium gossypii] >g...    49   2e-04
gi|50259518|gb|EAL22191.1| hypothetical protein CNBC3290 [Crypto...    49   2e-04
gi|13812337|ref|NP_113455.1| transcription initiation factor IID...    43   0.010
gi|32416006|ref|XP_328481.1| hypothetical protein [Neurospora cr...    42   0.016
gi|7503309|pir||T22125 hypothetical protein F43D9.5 - Caenorhabd...    42   0.016
gi|44920588|gb|AAK27848.2| putative sugar transferase [Aneurinib...    37   0.90
gi|23510018|ref|NP_702684.1| hypothetical protein [Plasmodium fa...    35   2.6
gi|15839152|ref|NP_299840.1| asparaginyl-tRNA synthetase [Xylell...    35   3.4
gi|48104806|ref|XP_395849.1| similar to ENSANGP00000005757 [Apis...    35   3.4
gi|32417458|ref|XP_329207.1| hypothetical protein [Neurospora cr...    34   4.5
gi|7499062|pir||T20879 hypothetical protein F14B6.6 - Caenorhabd...    33   9.9
gi|25346265|pir||F87937 protein F14B6.6 [imported] - Caenorhabdi...    33   9.9
gi|482634|pir||A60944 ubiquinol-cytochrome-c reductase (EC 1.10....    33   9.9


>gi|17509351|ref|NP_492019.1| TBP-Associated transcription Factor
           family member (taf-11.2) [Caenorhabditis elegans]
 gi|7505724|pir||T23572 hypothetical protein K10D3.3 -
           Caenorhabditis elegans
 gi|3878489|emb|CAA99885.1| C. elegans TAF-11.2 protein
           (corresponding sequence K10D3.3) [Caenorhabditis
           elegans]
          Length = 327

 Score =  537 bits (1384), Expect = e-151
 Identities = 278/327 (85%), Positives = 278/327 (85%)
 Frame = +1

Query: 1   MQNTSPSETHKMSTHYEHSLQXXXXXXXXXXXXXXXXXXLFYLKYRMNTNDLFGGVSSDE 180
           MQNTSPSETHKMSTHYEHSLQ                  LFYLKYRMNTNDLFGGVSSDE
Sbjct: 1   MQNTSPSETHKMSTHYEHSLQRFSFIRPISFFSFSHISPLFYLKYRMNTNDLFGGVSSDE 60

Query: 181 EEQCVMPQQMPSEKDVLADLKMSDKEDILVETAPSVEKKEEPIVKMEETISITQQSFLPQ 360
           EEQCVMPQQMPSEKDVLADLKMSDKEDILVETAPSVEKKEEPIVKMEETISITQQSFLPQ
Sbjct: 61  EEQCVMPQQMPSEKDVLADLKMSDKEDILVETAPSVEKKEEPIVKMEETISITQQSFLPQ 120

Query: 361 IKPQVVFYLPNDNTSTIVFKSFWMHNGKPIREIVDGQGTSQFTACFKESVXXXXXXXXXX 540
           IKPQVVFYLPNDNTSTIVFKSFWMHNGKPIREIVDGQGTSQFTACFKESV
Sbjct: 121 IKPQVVFYLPNDNTSTIVFKSFWMHNGKPIREIVDGQGTSQFTACFKESVREEEQRRKRL 180

Query: 541 XXXXXXXNAMRAASPEIPAGPPPTKRXXXXXXXXXXXXXXNQVLVANFSQEQIERYEVYR 720
                  NAMRAASPEIPAGPPPTKR              NQVLVANFSQEQIERYEVYR
Sbjct: 181 REEKEKENAMRAASPEIPAGPPPTKRQILEQEEKEIILLKNQVLVANFSQEQIERYEVYR 240

Query: 721 KSSFKKSTIKRLINEFTGGIDLGKKVDIAVAGLAKVLVGEIVEEALDIRDLDEKEAKEPL 900
           KSSFKKSTIKRLINEFTGGIDLGKKVDIAVAGLAKVLVGEIVEEALDIRDLDEKEAKEPL
Sbjct: 241 KSSFKKSTIKRLINEFTGGIDLGKKVDIAVAGLAKVLVGEIVEEALDIRDLDEKEAKEPL 300

Query: 901 QPHHIRQAYLRLGEQGKLLPSFGQGNN 981
           QPHHIRQAYLRLGEQGKLLPSFGQGNN
Sbjct: 301 QPHHIRQAYLRLGEQGKLLPSFGQGNN 327




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