Homology by BLASTX


BLASTX 2.2.4 [Aug-26-2002]
Query= H28O16_2
         (1617 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|17507955|ref|NP_493202.1| defective (57.8 kD) (1N245) [Caenor...   997   0.0
gi|39580722|emb|CAE64108.1| Hypothetical protein CBG08717 [Caeno...   973   0.0
gi|42733088|emb|CAF31480.1| Hypothetical protein H28O16.1d [Caen...   949   0.0
gi|31441843|emb|CAD92384.1| Hypothetical protein H28O16.1c [Caen...   932   0.0
gi|48100966|ref|XP_392639.1| similar to ENSANGP00000009989 [Apis...   822   0.0
gi|31210101|ref|XP_314017.1| ENSANGP00000009989 [Anopheles gambi...   813   0.0
gi|32766606|gb|AAH54959.1| Atp5a1-prov protein [Xenopus laevis]       812   0.0
gi|15030240|gb|AAH11384.1| ATP synthase, H+ transporting, mitoch...   811   0.0
gi|40538742|ref|NP_075581.1| mitochondrial H+-ATP synthase alpha...   810   0.0
gi|114523|sp|P15999|ATPA_RAT ATP synthase alpha chain, mitochond...   810   0.0
gi|6729934|pdb|1MAB|A Chain A, Rat Liver F1-Atpase                    809   0.0
gi|30585339|gb|AAP36942.1| Homo sapiens ATP synthase, H+ transpo...   809   0.0
gi|4757810|ref|NP_004037.1| ATP synthase, H+ transporting, mitoc...   809   0.0
gi|45383566|ref|NP_989617.1| ATP synthase, H+ transporting, mito...   809   0.0
gi|6680748|ref|NP_031531.1| ATP synthase, H+ transporting, mitoc...   809   0.0
gi|27807237|ref|NP_777109.1| ATP synthase, H+ transporting, mito...   806   0.0
gi|50345982|ref|NP_001001935.1| ATP synthase, H+ transporting, m...   806   0.0
gi|24660110|gb|AAH39135.1| ATP5A1 protein [Homo sapiens]              806   0.0
gi|1827809|pdb|1COW|A Chain A, Bovine Mitochondrial F1-Atpase Co...   806   0.0
gi|1943080|pdb|1BMF|A Chain A, Bovine Mitochondrial F1-Atpase >g...   806   0.0
gi|24658560|ref|NP_726243.1| CG3612-PA [Drosophila melanogaster]...   801   0.0
gi|47207317|emb|CAF96443.1| unnamed protein product [Tetraodon n...   800   0.0
gi|14009437|dbj|BAB47389.1| mitochondrial ATP synthase alpha-sub...   794   0.0
gi|114535|sp|P08428|ATPA_XENLA ATP synthase alpha chain, mitocho...   793   0.0
gi|47551121|ref|NP_999743.1| mitochondrial ATP synthase alpha su...   790   0.0
gi|18143645|dbj|BAB79706.1| ATP synthase alpha-subunit [Ciona in...   733   0.0
gi|34782901|gb|AAH08028.2| ATP5A1 protein [Homo sapiens]              726   0.0
gi|23015477|ref|ZP_00055252.1| COG0056: F0F1-type ATP synthase, ...   715   0.0
gi|2447011|dbj|BAA22508.1| F1F0-ATPase alpha subunit precursor [...   709   0.0
gi|45200825|ref|NP_986395.1| AGL272Cp [Eremothecium gossypii] >g...   708   0.0
gi|6319370|ref|NP_009453.1| Alpha subunit of the F1 sector of mi...   707   0.0
gi|47227593|emb|CAG09590.1| unnamed protein product [Tetraodon n...   706   0.0
gi|1660995|dbj|BAA13613.1| defective F1F0-ATPase alpha subunit p...   706   0.0
gi|2447013|dbj|BAA22509.1| defective F1F0-ATPase alpha subunit p...   706   0.0
gi|50294700|ref|XP_449761.1| unnamed protein product [Candida gl...   706   0.0
gi|19115831|ref|NP_594919.1| atp synthase alpha chain, mitochond...   704   0.0
gi|50308493|ref|XP_454248.1| ATPA_KLULA [Kluyveromyces lactis] >...   703   0.0
gi|32422539|ref|XP_331713.1| ATP SYNTHASE ALPHA CHAIN, MITOCHOND...   702   0.0
gi|11497478|ref|NP_042268.1| H(+)-transporting ATPase, subunit 1...   701   0.0
gi|38107282|gb|EAA53475.1| hypothetical protein MG07752.4 [Magna...   700   0.0
gi|15889879|ref|NP_355560.1| AGR_C_4757p [Agrobacterium tumefaci...   699   0.0
gi|38422323|emb|CAE45325.1| unnamed protein product [Magnetospir...   699   0.0
gi|50257459|gb|EAL20166.1| hypothetical protein CNBF2430 [Crypto...   698   0.0
gi|38638271|ref|NP_943682.1| ATP synthase F1 subunit alpha [Char...   697   0.0
gi|50555055|ref|XP_504936.1| hypothetical protein [Yarrowia lipo...   697   0.0
gi|49087454|ref|XP_405660.1| ATPA_NEUCR ATP synthase alpha chain...   695   0.0
gi|11467148|ref|NP_054447.1| atpA [Marchantia polymorpha] >gnl|B...   694   0.0
gi|6066186|gb|AAF03204.1| ATP synthase F1 subunit alpha [Nephros...   693   0.0
gi|48848346|ref|ZP_00302592.1| COG0056: F0F1-type ATP synthase, ...   690   0.0
gi|13938339|gb|AAH07299.1| Similar to ATP synthase, H+ transport...   687   0.0
gi|13473458|ref|NP_105025.1| ATP synthetase alpha [Mesorhizobium...   687   0.0
gi|15966789|ref|NP_387142.1| PROBABLE ATP SYNTHASE ALPHA CHAIN P...   686   0.0
gi|171116|gb|AAA66888.1| ATPase 1 alpha subunit                       686   0.0
gi|22550331|ref|NP_689366.1| ATP synthase F1 subunit alpha [Chae...   684   0.0
gi|2147140|pir||S62702 H+-transporting two-sector ATPase (EC 3.6...   683   0.0
gi|45916916|ref|ZP_00197680.1| COG0056: F0F1-type ATP synthase, ...   682   0.0
gi|23502654|ref|NP_698781.1| ATP synthase F1, alpha subunit [Bru...   681   0.0
gi|17986533|ref|NP_539167.1| ATP SYNTHASE ALPHA CHAIN [Brucella ...   679   0.0
gi|48764967|ref|ZP_00269518.1| COG0056: F0F1-type ATP synthase, ...   678   0.0
gi|11466576|ref|NP_066466.1| ATP synthase F1 subunit alpha [Rhod...   674   0.0
gi|11466531|ref|NP_044780.1| ATP synthase F1 subunit alpha [Recl...   672   0.0
gi|2493020|sp|P72245|ATPA_RHOCA ATP synthase alpha chain >gnl|BL...   668   0.0
gi|49474712|ref|YP_032754.1| ATP synthase alpha chain [Bartonell...   666   0.0
gi|114524|sp|P05439|ATPA_RHOBL ATP synthase alpha chain >gnl|BL_...   666   0.0
gi|49095520|ref|XP_409221.1| hypothetical protein AN5084.2 [Aspe...   665   0.0
gi|49476189|ref|YP_034230.1| ATP synthase alpha chain [Bartonell...   664   0.0
gi|39933255|ref|NP_945531.1| putative H+-transporting ATP syntha...   663   0.0
gi|28630328|gb|AAM93476.1| H+-transporting ATP synthase alpha su...   663   0.0
gi|27375553|ref|NP_767082.1| ATP synthase alpha chain [Bradyrhiz...   663   0.0
gi|22958763|ref|ZP_00006427.1| COG0056: F0F1-type ATP synthase, ...   662   0.0
gi|114405|sp|P05494|ATP0_MAIZE ATP synthase alpha chain, mitocho...   660   0.0
gi|16127679|ref|NP_422243.1| ATP synthase F1, alpha subunit [Cau...   658   0.0
gi|543866|sp|P05493|ATP0_PEA ATP synthase alpha chain, mitochond...   657   0.0
gi|100086|pir||A26760 H+-transporting two-sector ATPase (EC 3.6....   657   0.0
gi|114409|sp|P15998|ATP0_ORYSA ATP synthase alpha chain, mitocho...   657   0.0
gi|5305369|gb|AAD41619.1| ATP synthase alpha chain [Vigna radiata]    656   0.0
gi|3410894|dbj|BAA32243.1| F1 ATPase subunit alpha [Beta vulgaris]    656   0.0
gi|114408|sp|P05492|ATP0_OENBI ATP synthase alpha chain, mitocho...   655   0.0
gi|13725|emb|CAA34060.1| unnamed protein product [Triticum aesti...   654   0.0
gi|231585|sp|Q01915|ATP0_SOYBN ATP synthase alpha chain, mitocho...   654   0.0
gi|50261318|ref|YP_052891.1| ATP synthase F1 subunit alpha [Sapr...   654   0.0
gi|50428171|ref|XP_459057.1| unnamed protein product [Debaryomyc...   652   0.0
gi|114411|sp|P24459|ATP0_PHAVU ATP synthase alpha chain, mitocho...   651   0.0
gi|114419|sp|P12862|ATP0_WHEAT ATP synthase alpha chain, mitocho...   650   0.0
gi|7436068|pir||T08113 H+-transporting two-sector ATPase (EC 3.6...   650   0.0
gi|9838493|ref|NP_064105.1| ATPase subunit 1 [Beta vulgaris subs...   649   0.0
gi|44964389|gb|AAS49522.1| mitochondrial ATP synthase H+ transpo...   648   0.0
gi|34581170|ref|ZP_00142650.1| ATP synthase alpha chain [Rickett...   647   0.0
gi|9695382|ref|NP_037604.1| ATP synthase F1 subunit alpha [Phyto...   647   0.0
gi|2118184|pir||S46508 H+-transporting two-sector ATPase (EC 3.6...   646   0.0
gi|20137393|sp|Q92G86|ATPA_RICCN ATP synthase alpha chain             646   0.0
gi|15893160|ref|NP_360874.1| ATP synthase alpha chain [EC:3.6.1....   646   0.0
gi|114404|sp|P18260|ATP0_HELAN ATP synthase alpha chain, mitocho...   645   0.0
gi|1421799|gb|AAB03873.1| F1-ATPase alpha subunit [Petunia axill...   645   0.0
gi|100529|pir||S19261 H+-transporting two-sector ATPase (EC 3.6....   644   0.0
gi|114407|sp|P05495|ATP0_NICPL ATP synthase alpha chain, mitocho...   644   0.0
gi|2645893|gb|AAB87529.1| F1 ATPase a-subunit [Panax ginseng]         643   0.0
gi|48833095|ref|ZP_00290119.1| COG0056: F0F1-type ATP synthase, ...   642   0.0
gi|11263|emb|CAA48649.1| ATPase subunit [Beta vulgaris subsp. vu...   641   0.0
gi|15429015|gb|AAK98045.1| ATP1 [Daucus carota] >gnl|BL_ORD_ID|1...   641   0.0
gi|37591102|dbj|BAC98904.1| ATPase subunit 1 [Brassica napus]         639   0.0
gi|9408184|emb|CAB99314.1| F0-F1 ATPase alpha subunit [Sorghum b...   639   0.0
gi|903732|gb|AAA75456.1| F1 ATPase alpha subunit                      638   0.0
gi|14916970|sp|P92549|ATP0_ARATH ATP synthase alpha chain, mitoc...   637   0.0
gi|15226092|ref|NP_178788.1| ATP synthase alpha chain, mitochond...   636   0.0
gi|114403|sp|P22201|ATP0_BRANA ATP synthase alpha chain, mitocho...   635   e-180
gi|114417|sp|P23413|ATP0_RAPSA ATP synthase alpha chain, mitocho...   635   e-180
gi|50058599|gb|AAT69052.1| F1-ATPase alpha subunit [Bonamia media]    635   e-180
gi|50058623|gb|AAT69064.1| F1-ATPase alpha subunit [Cuscuta euro...   634   e-180
gi|50058565|gb|AAT69035.1| F1-ATPase alpha subunit [Ipomoea bata...   634   e-180
gi|50058633|gb|AAT69069.1| F1-ATPase alpha subunit [Montinia car...   634   e-180
gi|50058595|gb|AAT69050.1| F1-ATPase alpha subunit [Falkia repens]    634   e-180
gi|26557005|ref|NP_085571.2| ATPase subunit 1 [Arabidopsis thali...   633   e-180
gi|2665936|gb|AAB88551.1| putative F1-ATP synthase alpha subunit...   633   e-180
gi|50058603|gb|AAT69054.1| F1-ATPase alpha subunit [Rapona tilii...   632   e-180
gi|50058581|gb|AAT69043.1| F1-ATPase alpha subunit [Odonellia hi...   632   e-180
gi|15604635|ref|NP_221153.1| ATP SYNTHASE ALPHA CHAIN  (atpA) [R...   632   e-179
gi|6561666|gb|AAF17010.1| ATPase alpha subunit [Calycanthus flor...   632   e-179
gi|6561621|gb|AAF16965.1| ATPase alpha subunit [Saururus cernuus]     632   e-179
gi|50058589|gb|AAT69047.1| F1-ATPase alpha subunit [Evolvulus gl...   631   e-179
gi|50058569|gb|AAT69037.1| F1-ATPase alpha subunit [Lepistemon o...   631   e-179
gi|50058611|gb|AAT69058.1| F1-ATPase alpha subunit [Maripa repens]    631   e-179
gi|50058567|gb|AAT69036.1| F1-ATPase alpha subunit [Astripomoea ...   629   e-179
gi|13111901|gb|AAH03119.1| Similar to ATP synthase, H+ transport...   629   e-179
gi|50058579|gb|AAT69042.1| F1-ATPase alpha subunit [Iseia luxuri...   628   e-178
gi|50058625|gb|AAT69065.1| F1-ATPase alpha subunit [Cuscuta japo...   627   e-178
gi|6561610|gb|AAF16954.1| ATPase alpha subunit [Acorus gramineus]     627   e-178
gi|50058577|gb|AAT69041.1| F1-ATPase alpha subunit [Convolvulus ...   627   e-178
gi|50058605|gb|AAT69055.1| F1-ATPase alpha subunit [Jacquemontia...   627   e-178
gi|3273600|gb|AAC24782.1| F1-ATPase alpha subunit [Acorus calamus]    626   e-178
gi|27461611|gb|AAM95222.1| ATPase F1 alpha subunit [Thurnia poly...   625   e-178
gi|6561620|gb|AAF16964.1| ATPase alpha subunit [Houttuynia cordata]   625   e-178
gi|6561624|gb|AAF16968.1| ATPase alpha subunit [Buxus sempervirens]   624   e-177
gi|6561622|gb|AAF16966.1| ATPase alpha subunit [Pachysandra proc...   624   e-177
gi|50058629|gb|AAT69067.1| F1-ATPase alpha subunit [Nicotiana ta...   624   e-177
gi|6561623|gb|AAF16967.1| ATPase alpha subunit [Sarcococca confusa]   624   e-177
gi|6561646|gb|AAF16990.1| ATPase alpha subunit [Xanthorhiza simp...   623   e-177
gi|6561668|gb|AAF17012.1| ATPase alpha subunit [Idiospermum aust...   623   e-177
gi|50058607|gb|AAT69056.1| F1-ATPase alpha subunit [Jacquemontia...   622   e-177
gi|7620569|gb|AAF64671.1| F1 ATPase alpha subunit [Lycopodium di...   622   e-177
gi|50058631|gb|AAT69068.1| F1-ATPase alpha subunit [Schizanthus ...   622   e-176
gi|3273578|gb|AAC24771.1| F1-ATPase alpha subunit [Symplocarpus ...   622   e-176
gi|27461605|gb|AAM95219.1| ATPase F1 alpha subunit [Baloskion te...   621   e-176
gi|46433615|gb|EAK93049.1| hypothetical protein CaO19.6854 [Cand...   620   e-176
gi|27461573|gb|AAM95203.1| ATPase F1 alpha subunit [Anarthria pr...   620   e-176
gi|3273584|gb|AAC24774.1| F1-ATPase alpha subunit [Flagellaria i...   620   e-176
gi|27461591|gb|AAM95212.1| ATPase F1 alpha subunit [Mayaca sello...   619   e-176
gi|6561692|gb|AAF17036.1| ATPase alpha subunit [Tofieldia calycu...   619   e-176
gi|6561694|gb|AAF17038.1| ATPase alpha subunit [Spathiphyllum cl...   619   e-176
gi|6561609|gb|AAF16953.1| ATPase alpha subunit [Acorus calamus]       619   e-176
gi|27461567|gb|AAM95200.1| ATPase F1 alpha subunit [Typha latifo...   618   e-175
gi|3273604|gb|AAC24784.1| F1-ATPase alpha subunit [Eriocaulon aq...   618   e-175
gi|6561625|gb|AAF16969.1| ATPase alpha subunit [Didymeles perrieri]   618   e-175
gi|6561704|gb|AAF17048.1| ATPase alpha subunit [Triglochin marit...   618   e-175
gi|27461589|gb|AAM95211.1| ATPase F1 alpha subunit [Luzula acumi...   618   e-175
gi|6561635|gb|AAF16979.1| ATPase alpha subunit [Tetracentron sin...   617   e-175
gi|3273576|gb|AAC24770.1| F1-ATPase alpha subunit [Gymnostachys ...   617   e-175
gi|27461585|gb|AAM95209.1| ATPase F1 alpha subunit [Joinvillea a...   617   e-175
gi|6561705|gb|AAF17049.1| ATPase alpha subunit [Alisma plantago-...   617   e-175
gi|3273602|gb|AAC24783.1| F1-ATPase alpha subunit [Catopsis nutans]   617   e-175
gi|12659355|gb|AAG60212.1| ATPase alpha subunit [Calycanthus flo...   617   e-175
gi|27461597|gb|AAM95215.1| ATPase F1 alpha subunit [Bambusa mult...   616   e-175
gi|27461599|gb|AAM95216.1| ATPase F1 alpha subunit [Anomochloa m...   616   e-175
gi|12659381|gb|AAG60225.1| ATPase alpha subunit [Saururus chinen...   616   e-175
gi|6561648|gb|AAF16992.1| ATPase alpha subunit [Podophyllum pelt...   616   e-175
gi|3273580|gb|AAC24772.1| F1-ATPase alpha subunit [Anigozanthos ...   616   e-175
gi|6561691|gb|AAF17035.1| ATPase alpha subunit [Pleea tenuifolia]     615   e-175
gi|6561629|gb|AAF16973.1| ATPase alpha subunit [Cabomba sp. Qiu ...   615   e-175
gi|1381685|gb|AAB02741.1| F1-ATPase alpha subunit [Calamus usita...   615   e-175
gi|27461581|gb|AAM95207.1| ATPase F1 alpha subunit [Eriocaulon h...   615   e-175
gi|27461587|gb|AAM95210.1| ATPase F1 alpha subunit [Juncus sp. J...   615   e-175
gi|6561659|gb|AAF17003.1| ATPase alpha subunit [Asarum canadense]     615   e-174
gi|1381689|gb|AAB02743.1| F1-ATPase alpha subunit [Phoenix recli...   615   e-174
gi|6561699|gb|AAF17043.1| ATPase alpha subunit [Amborella tricho...   614   e-174
gi|3273588|gb|AAC24776.1| F1-ATPase alpha subunit [Xanthorrhoea ...   613   e-174
gi|82013|pir||S17916 H+-transporting two-sector ATPase (EC 3.6.3...   613   e-174
gi|27461563|gb|AAM95198.1| ATPase F1 alpha subunit [Puya bertero...   613   e-174
gi|6561693|gb|AAF17037.1| ATPase alpha subunit [Orontium aquaticum]   613   e-174
gi|6561639|gb|AAF16983.1| ATPase alpha subunit [Sanguinaria cana...   613   e-174
gi|27461561|gb|AAM95197.1| ATPase F1 alpha subunit [Tillandsia u...   613   e-174
gi|27461601|gb|AAM95217.1| ATPase F1 alpha subunit [Prionium ser...   613   e-174
gi|3273586|gb|AAC24775.1| F1-ATPase alpha subunit [Curculigo cap...   613   e-174
gi|6561697|gb|AAF17041.1| ATPase alpha subunit [Dioscorea sp. Qi...   613   e-174
gi|6561630|gb|AAF16974.1| ATPase alpha subunit [Akebia quinata]       613   e-174
gi|6561638|gb|AAF16982.1| ATPase alpha subunit [Euptelea polyandra]   612   e-174
gi|27461615|gb|AAM95224.1| ATPase F1 alpha subunit [Orectanthe s...   612   e-174
gi|6561689|gb|AAF17033.1| ATPase alpha subunit [Gyrocarpus sp. C...   612   e-174
gi|27461609|gb|AAM95221.1| ATPase F1 alpha subunit [Thamnochortu...   612   e-174
gi|6561618|gb|AAF16962.1| ATPase alpha subunit [Piper betle]          612   e-174
gi|20799694|gb|AAM28610.1| ATPase alpha subunit [Prosopanche ame...   612   e-174
gi|27461565|gb|AAM95199.1| ATPase F1 alpha subunit [Sparganium e...   612   e-173
gi|6561631|gb|AAF16975.1| ATPase alpha subunit [Lardizabala bite...   611   e-173
gi|6561696|gb|AAF17040.1| ATPase alpha subunit [Croomia pauciflora]   611   e-173
gi|27461571|gb|AAM95202.1| ATPase F1 alpha subunit [Schoenocepha...   611   e-173
gi|27461583|gb|AAM95208.1| ATPase F1 alpha subunit [Tonina fluvi...   610   e-173
gi|6561695|gb|AAF17039.1| ATPase alpha subunit [Carludovica palm...   610   e-173
gi|6561660|gb|AAF17004.1| ATPase alpha subunit [Saruma henryi]        610   e-173
gi|1381687|gb|AAB02742.1| F1-ATPase alpha subunit [Nypa fruticans]    610   e-173
gi|44969408|gb|AAS49605.1| mitochondrial ATP synthase alpha subu...   609   e-173
gi|6561657|gb|AAF17001.1| ATPase alpha subunit [Aristolochia mac...   609   e-173
gi|6561688|gb|AAF17032.1| ATPase alpha subunit [Cananga odorata]      608   e-173
gi|27461557|gb|AAM95195.1| ATPase F1 alpha subunit [Calectasia c...   608   e-173
gi|6561679|gb|AAF17023.1| ATPase alpha subunit [Magnolia tripetala]   608   e-173
gi|6561640|gb|AAF16984.1| ATPase alpha subunit [Persoonia katerae]    608   e-172
gi|6561637|gb|AAF16981.1| ATPase alpha subunit [Dicentra sp. Qiu...   608   e-172
gi|6561633|gb|AAF16977.1| ATPase alpha subunit [Cissampelos pare...   608   e-172
gi|3273582|gb|AAC24773.1| F1-ATPase alpha subunit [Vellozia eleg...   608   e-172
gi|28630332|gb|AAM93478.1| H+-transporting ATP synthase alpha su...   608   e-172
gi|7620559|gb|AAF64666.1| F1 ATPase alpha subunit [Pinus strobus]     608   e-172
gi|12659387|gb|AAG60228.1| ATPase alpha subunit [Tetracentron si...   608   e-172
gi|27461619|gb|AAM95226.1| ATPase F1 alpha subunit [Xyris biceph...   607   e-172
gi|6561672|gb|AAF17016.1| ATPase alpha subunit [Daphnandra micra...   607   e-172
gi|6561634|gb|AAF16978.1| ATPase alpha subunit [Cocculus trilobus]    607   e-172
gi|6561664|gb|AAF17008.1| ATPase alpha subunit [Canella winterana]    607   e-172
gi|27461559|gb|AAM95196.1| ATPase F1 alpha subunit [Kingia austr...   607   e-172
gi|6561652|gb|AAF16996.1| ATPase alpha subunit [Austrobaileya sc...   607   e-172
gi|6561654|gb|AAF16998.1| ATPase alpha subunit [Sarcandra chlora...   607   e-172
gi|12659385|gb|AAG60227.1| ATPase alpha subunit [Arisaema triphy...   607   e-172
gi|6561661|gb|AAF17005.1| ATPase alpha subunit [Drimys winteri]       607   e-172
gi|3273590|gb|AAC24777.1| F1-ATPase alpha subunit [Smilax rotund...   607   e-172
gi|584805|sp|Q07405|ATPA_MYXXA ATP synthase alpha chain (59 kDa ...   606   e-172
gi|6561674|gb|AAF17018.1| ATPase alpha subunit [Peumus boldus]        606   e-172
gi|6561642|gb|AAF16986.1| ATPase alpha subunit [Nelumbo nucifera]     606   e-172
gi|6561671|gb|AAF17015.1| ATPase alpha subunit [Atherosperma mos...   606   e-172
gi|6561669|gb|AAF17013.1| ATPase alpha subunit [Cinnamomum camph...   606   e-172
gi|27461569|gb|AAM95201.1| ATPase F1 alpha subunit [Rapatea xiph...   605   e-172
gi|3273606|gb|AAC24785.1| F1-ATPase alpha subunit [Canna indica]      605   e-172
gi|6561673|gb|AAF17017.1| ATPase alpha subunit [Palmeria scanden...   605   e-171
gi|6561682|gb|AAF17026.1| ATPase alpha subunit [Polyalthia suber...   605   e-171
gi|6561663|gb|AAF17007.1| ATPase alpha subunit [Zygogynum paucif...   605   e-171
gi|15419579|gb|AAK97074.1| ATPase F1 alpha subunit [Degeneria vi...   605   e-171
gi|3273596|gb|AAC24780.1| F1-ATPase alpha subunit [Alstroemeria ...   605   e-171
gi|6561632|gb|AAF16976.1| ATPase alpha subunit [Sargentodoxa cun...   605   e-171
gi|17222551|gb|AAL36724.1| ATP synthase F1 subunit alpha [Mesost...   605   e-171
gi|6561615|gb|AAF16959.1| ATPase alpha subunit [Ceratophyllum de...   604   e-171
gi|12659367|gb|AAG60218.1| ATPase alpha subunit [Dioscorea macro...   604   e-171
gi|6561645|gb|AAF16989.1| ATPase alpha subunit [Sabia sp. Qiu 91...   604   e-171
gi|6561687|gb|AAF17031.1| ATPase alpha subunit [Mauloutchia chap...   603   e-171
gi|6561658|gb|AAF17002.1| ATPase alpha subunit [Thottea tomentosa]    603   e-171
gi|12659345|gb|AAG60207.1| ATPase alpha subunit [Akebia quinata]      603   e-171
gi|6561614|gb|AAF16958.1| ATPase alpha subunit [Pinus sp. Qiu94013]   603   e-171
gi|6561617|gb|AAF16961.1| ATPase alpha subunit [Peperomia obtusi...   603   e-171
gi|6561676|gb|AAF17020.1| ATPase alpha subunit [Doryphora sassaf...   603   e-171
gi|6561656|gb|AAF17000.1| ATPase alpha subunit [Hedyosmum arbore...   603   e-171
gi|6561703|gb|AAF17047.1| ATPase alpha subunit [Potamogeton berc...   603   e-171
gi|6561678|gb|AAF17022.1| ATPase alpha subunit [Liriodendron chi...   602   e-171
gi|6561684|gb|AAF17028.1| ATPase alpha subunit [Asimina triloba]      602   e-171
gi|6561636|gb|AAF16980.1| ATPase alpha subunit [Trochodendron ar...   602   e-171
gi|6561649|gb|AAF16993.1| ATPase alpha subunit [Kadsura japonica]     602   e-171
gi|6561685|gb|AAF17029.1| ATPase alpha subunit [Knema latericia]      602   e-171
gi|28630330|gb|AAM93477.1| H+-transporting ATP synthase alpha su...   602   e-171
gi|27461553|gb|AAM95193.1| ATPase F1 alpha subunit [Dasypogon ho...   602   e-171
gi|6561670|gb|AAF17014.1| ATPase alpha subunit [Laurus nobilis]       602   e-170
gi|6561686|gb|AAF17030.1| ATPase alpha subunit [Myristica fragrans]   601   e-170
gi|6561702|gb|AAF17046.1| ATPase alpha subunit [Ranunculus sp. Q...   601   e-170
gi|6561677|gb|AAF17021.1| ATPase alpha subunit [Hedycarya arborea]    601   e-170
gi|12659357|gb|AAG60213.1| ATPase alpha subunit [Canella winterana]   601   e-170
gi|39995222|ref|NP_951173.1| ATP synthase F1, alpha subunit [Geo...   601   e-170
gi|12659349|gb|AAG60209.1| ATPase alpha subunit [Aristolochia el...   601   e-170
gi|20799692|gb|AAM28609.1| ATPase alpha subunit [Hydnora africana]    600   e-170
gi|20146554|gb|AAM12431.1| ATP synthase alpha subunit [Clethra a...   600   e-170
gi|12659375|gb|AAG60222.1| ATPase alpha subunit [Piper bicolor]       600   e-170
gi|34556936|ref|NP_906751.1| ATP SYNTHASE F1 ALPHA SUBUNIT [Woli...   600   e-170
gi|12659363|gb|AAG60216.1| ATPase alpha subunit [Cinnamomum zeyl...   600   e-170
gi|12659373|gb|AAG60221.1| ATPase alpha subunit [Nelumbo lutea] ...   600   e-170
gi|48844976|ref|ZP_00299268.1| COG0056: F0F1-type ATP synthase, ...   599   e-170
gi|3273572|gb|AAC24768.1| F1-ATPase alpha subunit [Saruma henryi]     599   e-170
gi|6561667|gb|AAF17011.1| ATPase alpha subunit [Chimonanthus pra...   599   e-170
gi|6561650|gb|AAF16994.1| ATPase alpha subunit [Schisandra sphen...   599   e-170
gi|12659369|gb|AAG60219.1| ATPase alpha subunit [Drimys winteri]      599   e-170
gi|49078494|ref|XP_402994.1| hypothetical protein UM05379.1 [Ust...   598   e-170
gi|12659365|gb|AAG60217.1| ATPase alpha subunit [Corydalis lutea]     598   e-170
gi|3273574|gb|AAC24769.1| F1-ATPase alpha subunit [Piper nigrum]      598   e-170
gi|6561683|gb|AAF17027.1| ATPase alpha subunit [Annona muricata]      598   e-169
gi|24298788|dbj|BAC22103.1| F-ATPase alpha-subunit [Thermotoga n...   598   e-169
gi|6561680|gb|AAF17024.1| ATPase alpha subunit [Eupomatia bennet...   598   e-169
gi|28630334|gb|AAM93479.1| H+-transporting ATP synthase alpha su...   598   e-169
gi|27461593|gb|AAM95213.1| ATPase F1 alpha subunit [Streptochaet...   597   e-169
gi|20146556|gb|AAM12432.1| ATP synthase alpha subunit [Clethra b...   597   e-169
gi|12659377|gb|AAG60223.1| ATPase alpha subunit [Grevillea robusta]   597   e-169
gi|3273592|gb|AAC24778.1| F1-ATPase alpha subunit [Tacca pinnati...   597   e-169
gi|3273598|gb|AAC24781.1| F1-ATPase alpha subunit [Veratrum viride]   597   e-169
gi|23114960|ref|ZP_00100237.1| COG0056: F0F1-type ATP synthase, ...   597   e-169
gi|20146574|gb|AAM12441.1| ATP synthase alpha subunit [Galax urc...   597   e-169
gi|12659347|gb|AAG60208.1| ATPase alpha subunit [Amborella trich...   597   e-169
gi|12659359|gb|AAG60214.1| ATPase alpha subunit [Ceratophyllum d...   597   e-169
gi|3273594|gb|AAC24779.1| F1-ATPase alpha subunit [Trillium gran...   596   e-169
gi|12659351|gb|AAG60210.1| ATPase alpha subunit [Asimina triloba]     596   e-169
gi|6561647|gb|AAF16991.1| ATPase alpha subunit [Mahonia bealei]       596   e-169
gi|7620543|gb|AAF64658.1| F1 ATPase alpha subunit [Magnolia gran...   596   e-169
gi|12659389|gb|AAG60229.1| ATPase alpha subunit [Trimenia sp. CC...   596   e-169
gi|7620563|gb|AAF64668.1| F1 ATPase alpha subunit [Ginkgo biloba]     596   e-169
gi|6561605|gb|AAF16949.1| ATPase alpha subunit [Gnetum gnemon]        595   e-169
gi|6561698|gb|AAF17042.1| ATPase alpha subunit [Lactoris fernand...   595   e-168
gi|12659353|gb|AAG60211.1| ATPase alpha subunit [Austrobaileya s...   595   e-168
gi|15606090|ref|NP_213467.1| ATP synthase F1 alpha subunit [Aqui...   595   e-168
gi|20146560|gb|AAM12434.1| ATP synthase alpha subunit [Cyrilla r...   595   e-168
gi|27461575|gb|AAM95204.1| ATPase F1 alpha subunit [Carex interior]   593   e-168
gi|12659371|gb|AAG60220.1| ATPase alpha subunit [Knema kinabalue...   593   e-168
gi|6561626|gb|AAF16970.1| ATPase alpha subunit [Nuphar sp. Qiu-M...   593   e-168
gi|20146606|gb|AAM12457.1| ATP synthase alpha subunit [Pouteria ...   593   e-168
gi|6561643|gb|AAF16987.1| ATPase alpha subunit [Platanus occiden...   593   e-168
gi|20146558|gb|AAM12433.1| ATP synthase alpha subunit [Cobaea sc...   593   e-168
gi|6561690|gb|AAF17034.1| ATPase alpha subunit [Cryptocarya meis...   593   e-168
gi|6561644|gb|AAF16988.1| ATPase alpha subunit [Meliosma squamul...   592   e-168
gi|12659361|gb|AAG60215.1| ATPase alpha subunit [Hedyosmum sp. C...   592   e-168
gi|20146610|gb|AAM12459.1| ATP synthase alpha subunit [Sarraceni...   592   e-168
gi|7620547|gb|AAF64660.1| F1 ATPase alpha subunit [Nymphaea odor...   592   e-167
gi|46579190|ref|YP_009998.1| ATP synthase, F1 alpha subunit [Des...   592   e-167
gi|18311171|ref|NP_563105.1| ATP synthase alpha subunit [Clostri...   591   e-167
gi|20146620|gb|AAM12464.1| ATP synthase alpha subunit [Camellia ...   591   e-167
gi|49235184|ref|ZP_00329257.1| COG0056: F0F1-type ATP synthase, ...   591   e-167
gi|6561613|gb|AAF16957.1| ATPase alpha subunit [Ginkgo biloba]        591   e-167
gi|6561641|gb|AAF16985.1| ATPase alpha subunit [Petrophile canes...   591   e-167
gi|27461555|gb|AAM95194.1| ATPase F1 alpha subunit [Baxteria aus...   591   e-167
gi|6561619|gb|AAF16963.1| ATPase alpha subunit [Anemopsis califo...   591   e-167
gi|6561701|gb|AAF17045.1| ATPase alpha subunit [Asparagus offici...   591   e-167
gi|20146608|gb|AAM12458.1| ATP synthase alpha subunit [Samolus r...   591   e-167
gi|20146570|gb|AAM12439.1| ATP synthase alpha subunit [Eurya sp....   590   e-167
gi|20146616|gb|AAM12462.1| ATP synthase alpha subunit [Styrax of...   590   e-167
gi|5811566|dbj|BAA83611.1| F1F0-ATPase alpha subunit [Desulfovib...   590   e-167
gi|21674843|ref|NP_662908.1| ATP synthase F1, alpha subunit [Chl...   590   e-167
gi|6561700|gb|AAF17044.1| ATPase alpha subunit [Grevillea robusta]    590   e-167
gi|20146604|gb|AAM12456.1| ATP synthase alpha subunit [Polemoniu...   590   e-167
gi|33329385|gb|AAQ10088.1| ATP synthase subunit alpha [Bacillus ...   590   e-167
gi|42525220|ref|NP_970600.1| ATP synthase F1, alpha subunit [Bde...   590   e-167
gi|20146632|gb|AAM12470.1| ATP synthase alpha subunit [Tetrameri...   590   e-167
gi|20146596|gb|AAM12452.1| ATP synthase alpha subunit [Myrsine a...   590   e-167
gi|7620549|gb|AAF64661.1| F1 ATPase alpha subunit [Agathis austr...   590   e-167
gi|15644360|ref|NP_229412.1| ATP synthase F1, subunit alpha [The...   589   e-167
gi|6561653|gb|AAF16997.1| ATPase alpha subunit [Chloranthus mult...   589   e-167
gi|20146578|gb|AAM12443.1| ATP synthase alpha subunit [Halesia c...   589   e-167
gi|23481982|gb|EAA18103.1| ATP synthase F1, alpha subunit [Plasm...   588   e-166
gi|20146600|gb|AAM12454.1| ATP synthase alpha subunit [Palaquium...   588   e-166
gi|12659383|gb|AAG60226.1| ATPase alpha subunit [Schisandra henryi]   587   e-166
gi|20146598|gb|AAM12453.1| ATP synthase alpha subunit [Norantea ...   587   e-166
gi|20146586|gb|AAM12447.1| ATP synthase alpha subunit [Lysimachi...   586   e-166
gi|32265926|ref|NP_859958.1| FoF1-type ATP synthase [Helicobacte...   586   e-166
gi|20146594|gb|AAM12451.1| ATP synthase alpha subunit [Marcgravi...   585   e-166
gi|20146622|gb|AAM12465.1| ATP synthase alpha subunit [Vaccinium...   585   e-165
gi|27461579|gb|AAM95206.1| ATPase F1 alpha subunit [Ecdeiocolea ...   585   e-165
gi|34763444|ref|ZP_00144391.1| ATP synthase alpha chain, sodium ...   585   e-165
gi|20146552|gb|AAM12430.1| ATP synthase alpha subunit [Clavija d...   585   e-165
gi|20146592|gb|AAM12450.1| ATP synthase alpha subunit [Manilkara...   585   e-165
gi|50875721|emb|CAG35561.1| probable ATP synthase, alpha chain (...   584   e-165
gi|19703702|ref|NP_603264.1| ATP synthase alpha chain, sodium io...   584   e-165
gi|20146546|gb|AAM12427.1| ATP synthase alpha subunit [Cornus su...   584   e-165
gi|6561627|gb|AAF16971.1| ATPase alpha subunit [Nymphaea sp. Qiu...   583   e-165
gi|6561665|gb|AAF17009.1| ATPase alpha subunit [Cinnamodendron e...   583   e-165
gi|6561628|gb|AAF16972.1| ATPase alpha subunit [Brasenia schreberi]   583   e-165
gi|15791493|ref|NP_281316.1| ATP synthase F1 sector alpha subuni...   583   e-165
gi|20146584|gb|AAM12446.1| ATP synthase alpha subunit [Lissocarp...   583   e-165
gi|20146588|gb|AAM12448.1| ATP synthase alpha subunit [Madhuca m...   583   e-165
gi|20146568|gb|AAM12438.1| ATP synthase alpha subunit [Enkianthu...   583   e-165
gi|20146580|gb|AAM12444.1| ATP synthase alpha subunit [Heliampho...   582   e-165
gi|20146624|gb|AAM12466.1| ATP synthase alpha subunit [Symplocos...   582   e-165
gi|6561651|gb|AAF16995.1| ATPase alpha subunit [Illicium florida...   582   e-164
gi|20146614|gb|AAM12461.1| ATP synthase alpha subunit [Schizocod...   582   e-164
gi|7620551|gb|AAF64662.1| F1 ATPase alpha subunit [Araucaria het...   581   e-164
gi|22023565|gb|AAM89128.1| ATP synthase beta subunit [Pentaphyla...   580   e-164
gi|46308986|ref|ZP_00211178.1| COG0056: F0F1-type ATP synthase, ...   580   e-164
gi|27461607|gb|AAM95220.1| ATPase F1 alpha subunit [Elegia fenes...   580   e-164
gi|114510|sp|P17674|ATPA_BACME ATP synthase alpha chain >gnl|BL_...   579   e-164
gi|20146628|gb|AAM12468.1| ATP synthase alpha subunit [Sarcosper...   578   e-163
gi|7620541|gb|AAF64657.1| F1 ATPase alpha subunit [Trochodendron...   578   e-163
gi|20146612|gb|AAM12460.1| ATP synthase alpha subunit [Schima su...   578   e-163
gi|18075732|emb|CAD11286.1| ATP synthase F1, subunit alpha [Heli...   578   e-163
gi|18075720|emb|CAD11277.1| ATP synthase F1, subunit alpha [Heli...   577   e-163
gi|33440412|gb|AAQ19114.1| ATPase alpha subunit [Caldesia oligoc...   576   e-163
gi|15645748|ref|NP_207925.1| ATP synthase F1, subunit alpha (atp...   576   e-163
gi|7620561|gb|AAF64667.1| F1 ATPase alpha subunit [Gnetum ula]        576   e-163
gi|15616318|ref|NP_244623.1| ATP synthase alpha subunit [Bacillu...   575   e-163
gi|18075724|emb|CAD11280.1| ATP synthase F1, subunit alpha [Heli...   575   e-162
gi|14916960|sp|P22477|ATPA_BACPF ATP synthase alpha chain >gnl|B...   575   e-162
gi|16805058|ref|NP_473087.1| ATP synthase F1, alpha subunit, put...   574   e-162
gi|20146572|gb|AAM12440.1| ATP synthase alpha subunit [Fouquieri...   574   e-162
gi|20146576|gb|AAM12442.1| ATP synthase alpha subunit [Gordonia ...   573   e-162
gi|20146636|gb|AAM12472.1| ATP synthase alpha subunit [Napoleona...   573   e-162
gi|42520504|ref|NP_966419.1| ATP synthase F1, alpha subunit [Wol...   573   e-162
gi|33241053|ref|NP_875995.1| ATP synthase alpha chain [Prochloro...   573   e-162
gi|1929511|gb|AAB51464.1| ATP synthase subunit alpha                  572   e-162
gi|22297978|ref|NP_681225.1| H+-transporting ATP synthase alpha ...   572   e-162
gi|18075728|emb|CAD11283.1| ATP synthase F1, subunit alpha [Heli...   572   e-161
gi|15612127|ref|NP_223779.1| ATP synthase F1, subunit alpha [Hel...   572   e-161
gi|114529|sp|P08449|ATPA_SYNP6 ATP synthase alpha chain >gnl|BL_...   572   e-161
gi|33865030|ref|NP_896589.1| ATP synthase subunit alpha [Synecho...   571   e-161
gi|6561662|gb|AAF17006.1| ATPase alpha subunit [Tasmannia insipida]   571   e-161
gi|543872|sp|Q05372|ATPA_SYNP1 ATP synthase alpha chain >gnl|BL_...   570   e-161
gi|33440416|gb|AAQ19116.1| ATPase alpha subunit [Ottelia ovalifo...   570   e-161
gi|20146626|gb|AAM12467.1| ATP synthase alpha subunit [Ficalhoa ...   570   e-161
gi|46105929|ref|ZP_00199746.1| COG0056: F0F1-type ATP synthase, ...   570   e-161
gi|33862007|ref|NP_893568.1| ATP synthase alpha subunit, central...   570   e-161
gi|15896121|ref|NP_349470.1| FoF1-type ATP synthase alpha subuni...   569   e-161
gi|23100432|ref|NP_693899.1| H(+)-transporting ATP synthase alph...   569   e-161
gi|20146566|gb|AAM12437.1| ATP synthase alpha subunit [Empetrum ...   566   e-160
gi|11467065|ref|NP_042541.1| H(+)-transporting ATPase, subunit 1...   566   e-160
gi|20807128|ref|NP_622299.1| F0F1-type ATP synthase alpha subuni...   566   e-160
gi|16080736|ref|NP_391564.1| ATP synthase (subunit alpha) [Bacil...   565   e-160
gi|48855633|ref|ZP_00309791.1| COG0056: F0F1-type ATP synthase, ...   565   e-159
gi|6561681|gb|AAF17025.1| ATPase alpha subunit [Galbulimima belg...   564   e-159
gi|16329327|ref|NP_440055.1| ATP synthase a subunit [Synechocyst...   564   e-159
gi|7620545|gb|AAF64659.1| F1 ATPase alpha subunit [Illicium lanc...   563   e-159
gi|114531|sp|P09219|ATPA_BACP3 ATP synthase alpha chain >gnl|BL_...   563   e-159
gi|6561606|gb|AAF16950.1| ATPase alpha subunit [Welwitschia mira...   563   e-159
gi|114515|sp|P26679|ATPA_ENTHR ATP synthase alpha chain >gnl|BL_...   563   e-159
gi|33440418|gb|AAQ19117.1| ATPase alpha subunit [Scheuchzeria pa...   563   e-159
gi|23129579|ref|ZP_00111405.1| COG0056: F0F1-type ATP synthase, ...   562   e-159
gi|33440422|gb|AAQ19119.1| ATPase alpha subunit [Trichopus zeyla...   562   e-159
gi|33863734|ref|NP_895294.1| ATP synthase alpha subunit, central...   562   e-159
gi|41408551|ref|NP_961387.1| AtpA [Mycobacterium avium subsp. pa...   562   e-159
gi|48824470|ref|ZP_00285844.1| COG0056: F0F1-type ATP synthase, ...   562   e-159
gi|6561655|gb|AAF16999.1| ATPase alpha subunit [Ascarina sp. Qiu...   562   e-159
gi|15925095|ref|NP_372629.1| ATP synthase alpha chain [Staphyloc...   561   e-158
gi|7620553|gb|AAF64663.1| F1 ATPase alpha subunit [Podocarpus ma...   560   e-158
gi|27468620|ref|NP_765257.1| ATP synthase alpha chain [Staphyloc...   560   e-158
gi|21397779|ref|NP_653764.1| ATP-synt_ab, ATP synthase alpha/bet...   560   e-158
gi|33440420|gb|AAQ19118.1| ATPase alpha subunit [Dioscorea commu...   560   e-158
gi|30023339|ref|NP_834970.1| ATP synthase alpha chain [Bacillus ...   560   e-158
gi|29377095|ref|NP_816249.1| ATP synthase F1, alpha subunit [Ent...   559   e-158
gi|20146634|gb|AAM12471.1| ATP synthase alpha subunit [Sladenia ...   559   e-158
gi|45528414|ref|ZP_00179613.1| COG0056: F0F1-type ATP synthase, ...   559   e-158
gi|15608448|ref|NP_215824.1| atpA [Mycobacterium tuberculosis H3...   558   e-157
gi|1168565|sp|P42005|ATPA_BACST ATP synthase alpha chain >gnl|BL...   558   e-157
gi|22266797|gb|AAM94911.1| subunit alpha [Ilyobacter tartaricus]      558   e-157
gi|48891820|ref|ZP_00325269.1| COG0056: F0F1-type ATP synthase, ...   557   e-157
gi|231594|sp|P29706|ATPA_PROMO ATP synthase alpha chain, sodium ...   557   e-157
gi|46433584|gb|EAK93019.1| hypothetical protein CaO19.14144 [Can...   557   e-157
gi|13518443|ref|NP_084803.1| ATP synthase CF1 alpha chain [Lotus...   555   e-157
gi|20146550|gb|AAM12429.1| ATP synthase alpha subunit [Chimaphil...   554   e-156
gi|17227501|ref|NP_484049.1| ATP synthase subunit alpha [Nostoc ...   554   e-156
gi|28378940|ref|NP_785832.1| H(+)-transporting two-sector ATPase...   553   e-156
gi|11467516|ref|NP_043662.1| ATP synthase CF1 alpha chain [Odont...   553   e-156
gi|15827574|ref|NP_301837.1| ATP synthase [alpha] chain [Mycobac...   553   e-156
gi|46908703|ref|YP_015092.1| ATP synthase F1, alpha subunit [Lis...   553   e-156
gi|48836976|ref|ZP_00293971.1| COG0056: F0F1-type ATP synthase, ...   553   e-156
gi|16804569|ref|NP_466054.1| highly similar to H+-transporting A...   552   e-156
gi|11466686|ref|NP_039282.1| ATP synthase CF1 alpha chain [March...   552   e-155
gi|16801736|ref|NP_472004.1| highly similar to H+-transporting A...   551   e-155
gi|79749|pir||G31090 H+-transporting two-sector ATPase (EC 3.6.3...   551   e-155
gi|46447304|ref|YP_008669.1| probable H+-transporting ATP syntha...   551   e-155
gi|48781404|ref|ZP_00278026.1| COG0056: F0F1-type ATP synthase, ...   551   e-155
gi|11467021|ref|NP_041928.1| ATP synthase CF1 alpha chain [Eugle...   551   e-155
gi|7620567|gb|AAF64670.1| F1 ATPase alpha subunit [Cycas revoluta]    550   e-155
gi|27461613|gb|AAM95223.1| ATPase F1 alpha subunit [Abolboda mac...   550   e-155
gi|46312631|ref|ZP_00213226.1| COG0056: F0F1-type ATP synthase, ...   549   e-155
gi|6561611|gb|AAF16955.1| ATPase alpha subunit [Cycas revoluta]       549   e-155
gi|11466375|ref|NP_038378.1| ATP synthase CF1 alpha chain [Mesos...   549   e-155
gi|7524779|ref|NP_045781.1| ATP synthase CF1 alpha chain [Chlore...   548   e-154
gi|46320833|ref|ZP_00221216.1| COG0056: F0F1-type ATP synthase, ...   548   e-154
gi|50657742|gb|AAT79727.1| ATP synthase CF1 alpha subunit [Graci...   548   e-154
gi|24215479|ref|NP_712960.1| ATP synthase F1, alpha subunit [Lep...   547   e-154
gi|41725901|ref|ZP_00152659.1| COG0056: F0F1-type ATP synthase, ...   547   e-154
gi|48475986|gb|AAP29377.2| ATP synthase CF1 alpha chain [Adiantu...   546   e-154
gi|48871162|ref|ZP_00323878.1| COG0056: F0F1-type ATP synthase, ...   546   e-154
gi|23023847|ref|ZP_00063076.1| COG0056: F0F1-type ATP synthase, ...   546   e-154
gi|28261702|ref|NP_783217.1| ATP synthase CF1 alpha chain [Atrop...   546   e-154
gi|11465567|ref|NP_045041.1| ATP synthase CF1 alpha chain [Cyani...   546   e-154
gi|7620565|gb|AAF64669.1| F1 ATPase alpha subunit [Zamia furfura...   546   e-154
gi|48771437|ref|ZP_00275779.1| COG0056: F0F1-type ATP synthase, ...   546   e-154
gi|114522|sp|P08215|ATPA_PEA ATP synthase alpha chain >gnl|BL_OR...   546   e-154
gi|33440414|gb|AAQ19115.1| ATPase alpha subunit [Cymodocea serru...   545   e-154
gi|11467778|ref|NP_050829.1| ATP synthase CF1 alpha chain [Nephr...   545   e-154
gi|34501429|ref|NP_904216.1| ATP synthase CF1 alpha chain [Physc...   545   e-153
gi|7525018|ref|NP_051044.1| ATPase alpha subunit [Arabidopsis th...   545   e-153
gi|15673748|ref|NP_267922.1| ATP synthase alpha subunit [Lactoco...   545   e-153
gi|23002568|ref|ZP_00046243.1| COG0056: F0F1-type ATP synthase, ...   545   e-153
gi|22653667|sp|Q9RAU2|ATPA_LACLC ATP synthase alpha chain >gnl|B...   544   e-153
gi|42518863|ref|NP_964793.1| ATP synthase alpha chain [Lactobaci...   544   e-153
gi|114527|sp|P06450|ATPA_SPIOL ATP synthase alpha chain >gnl|BL_...   543   e-153
gi|28202156|ref|NP_777397.1| ATP synthase CF1 alpha chain [Antho...   543   e-153
gi|20146548|gb|AAM12428.1| ATP synthase alpha subunit [Actinidia...   543   e-153
gi|48860212|ref|ZP_00314138.1| COG0056: F0F1-type ATP synthase, ...   543   e-153
gi|11467365|ref|NP_043222.1| ATP synthase CF1 alpha chain [Cyano...   543   e-153
gi|50346767|ref|YP_053140.1| ATPase alpha subunit [Nymphaea alba...   543   e-153
gi|22711895|ref|NP_683781.1| ATP synthase CF1 alpha chain [Chaet...   543   e-153
gi|33598628|ref|NP_886271.1| ATP synthase alpha chain [Bordetell...   543   e-153
gi|6652831|gb|AAF22496.1| F1F0-ATPase subunit alpha [Lactobacill...   543   e-153
gi|3132304|dbj|BAA28167.1| Cl--pumping ATPase a subunit [Acetabu...   543   e-153
gi|80090|pir||S17724 H+-transporting two-sector ATPase (EC 3.6.3...   543   e-153
gi|11465708|ref|NP_053852.1| ATP synthase CF1 alpha chain [Porph...   543   e-153
gi|11467680|ref|NP_050732.1| ATP synthase CF1 alpha chain [Guill...   543   e-153
gi|37522474|ref|NP_925851.1| ATP synthase alpha chain [Gloeobact...   542   e-153
gi|33594184|ref|NP_881828.1| ATP synthase alpha chain [Bordetell...   542   e-153
gi|461562|sp|P35009|ATPA_GALSU ATP synthase alpha chain >gnl|BL_...   542   e-153
gi|20146582|gb|AAM12445.1| ATP synthase alpha subunit [Impatiens...   542   e-152
gi|46366075|ref|ZP_00228479.1| COG0056: F0F1-type ATP synthase, ...   542   e-152
gi|50812525|ref|YP_054628.1| ATP synthase alpha subunit [Sacchar...   541   e-152
gi|7620555|gb|AAF64664.1| F1 ATPase alpha subunit [Juniperus vir...   541   e-152
gi|14715604|gb|AAK72441.1| ATP synthase alpha subunit [Clostridi...   541   e-152
gi|24379919|ref|NP_721874.1| FoF1 membrane-bound proton-transloc...   541   e-152
gi|17548036|ref|NP_521438.1| PROBABLE ATP SYNTHASE ALPHA CHAIN P...   541   e-152
gi|26992090|ref|NP_747515.1| ATP synthase F1, alpha subunit [Pse...   541   e-152
gi|22970020|ref|ZP_00017191.1| hypothetical protein [Chloroflexu...   541   e-152
gi|15082071|gb|AAK84017.1| H+-ATPase cytoplasmic F1-part alpha-s...   541   e-152
gi|15901357|ref|NP_345961.1| ATP synthase F1, alpha subunit [Str...   541   e-152
gi|20146562|gb|AAM12435.1| ATP synthase alpha subunit [Diapensia...   541   e-152
gi|48478769|ref|YP_024377.1| ATP synthase CF1 alpha chain [Sacch...   540   e-152
gi|4100655|gb|AAD00916.1| proton-translocating ATPase alpha subu...   540   e-152
gi|11465939|ref|NP_054481.1| ATP synthase CF1 alpha chain [Nicot...   540   e-152
gi|48864613|ref|ZP_00318506.1| COG0056: F0F1-type ATP synthase, ...   540   e-152


>gi|17507955|ref|NP_493202.1| defective (57.8 kD) (1N245)
            [Caenorhabditis elegans]
 gi|7504983|pir||T23128 hypothetical protein H28O16.1 - Caenorhabditis
            elegans
 gi|3878073|emb|CAA19429.1| Hypothetical protein H28O16.1a
            [Caenorhabditis elegans]
          Length = 538

 Score =  997 bits (2578), Expect = 0.0
 Identities = 523/538 (97%), Positives = 523/538 (97%)
 Frame = +1

Query: 1    MLSKRIVTALNTAVKVQNAGIATTARGMAGASGSEVSKILEERILGTETGINLEETGKVL 180
            MLSKRIVTALNTAVKVQNAGIATTARGMAGASGSEVSKILEERILGTETGINLEETGKVL
Sbjct: 1    MLSKRIVTALNTAVKVQNAGIATTARGMAGASGSEVSKILEERILGTETGINLEETGKVL 60

Query: 181  SIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMNLXXXXXXXXXXXXXXXIREGDIVKRTG 360
            SIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMNL               IREGDIVKRTG
Sbjct: 61   SIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMNLDVDNVGVVVFGNDKVIREGDIVKRTG 120

Query: 361  AIVDVPVGDGLLGRVVDALGNPIDGKGPIANARRSRVEVKAPGIIPRLSVREPMVTGVKA 540
            AIVDVPVGDGLLGRVVDALGNPIDGKGPIANARRSRVEVKAPGIIPRLSVREPMVTGVKA
Sbjct: 121  AIVDVPVGDGLLGRVVDALGNPIDGKGPIANARRSRVEVKAPGIIPRLSVREPMVTGVKA 180

Query: 541  VDSLVPIGRGQRELIIGDRQTGKTAIAIDTIINQKRFNDAGDDKKKLFCIYVAVGQKRST 720
            VDSLVPIGRGQRELIIGDRQTGKTAIAIDTIINQKRFNDAGDDKKKLFCIYVAVGQKRST
Sbjct: 181  VDSLVPIGRGQRELIIGDRQTGKTAIAIDTIINQKRFNDAGDDKKKLFCIYVAVGQKRST 240

Query: 721  VAQIVKRLTDAGAMDYTIVVSATASDAAPLQFLAPYSGCAMGEHFRDNGKHALIIFDDLS 900
            VAQIVKRLTDAGAMDYTIVVSATASDAAPLQFLAPYSGCAMGEHFRDNGKHALIIFDDLS
Sbjct: 241  VAQIVKRLTDAGAMDYTIVVSATASDAAPLQFLAPYSGCAMGEHFRDNGKHALIIFDDLS 300

Query: 901  KQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNNSLGGGSLTALPVIETQAG 1080
            KQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNNSLGGGSLTALPVIETQAG
Sbjct: 301  KQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNNSLGGGSLTALPVIETQAG 360

Query: 1081 DVSAYIPTNVISITDGQIFLETELFYKGVRPAINVGLSVSRVGSAAQTKAMKQVAGSMKL 1260
            DVSAYIPTNVISITDGQIFLETELFYKGVRPAINVGLSVSRVGSAAQTKAMKQVAGSMKL
Sbjct: 361  DVSAYIPTNVISITDGQIFLETELFYKGVRPAINVGLSVSRVGSAAQTKAMKQVAGSMKL 420

Query: 1261 ELAQYREVAAFAQFGSDLDASTQQLLNRGVRLTELLKQGQYVPMGIEEQVGVIYAGVKGY 1440
            ELAQYREVAAFAQFGSDLDASTQQLLNRGVRLTELLKQGQYVPMGIEEQVGVIYAGVKGY
Sbjct: 421  ELAQYREVAAFAQFGSDLDASTQQLLNRGVRLTELLKQGQYVPMGIEEQVGVIYAGVKGY 480

Query: 1441 LDKVDPSAITKFEKEFLAHLRSSQQALLKTIREEGQISPQTDAQLKDVVVNFLATFKP 1614
            LDKVDPSAITKFEKEFLAHLRSSQQALLKTIREEGQISPQTDAQLKDVVVNFLATFKP
Sbjct: 481  LDKVDPSAITKFEKEFLAHLRSSQQALLKTIREEGQISPQTDAQLKDVVVNFLATFKP 538


>gi|39580722|emb|CAE64108.1| Hypothetical protein CBG08717
            [Caenorhabditis briggsae]
          Length = 537

 Score =  973 bits (2516), Expect = 0.0
 Identities = 512/538 (95%), Positives = 519/538 (96%)
 Frame = +1

Query: 1    MLSKRIVTALNTAVKVQNAGIATTARGMAGASGSEVSKILEERILGTETGINLEETGKVL 180
            MLSKRIVTALNTAVKVQNAGIATTARGMA ASGSEVSKILEERILGTETGINLEETGKVL
Sbjct: 1    MLSKRIVTALNTAVKVQNAGIATTARGMA-ASGSEVSKILEERILGTETGINLEETGKVL 59

Query: 181  SIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMNLXXXXXXXXXXXXXXXIREGDIVKRTG 360
            SIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMNL               IREGDIVKRTG
Sbjct: 60   SIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMNLDVDNVGVVVFGNDKVIREGDIVKRTG 119

Query: 361  AIVDVPVGDGLLGRVVDALGNPIDGKGPIANARRSRVEVKAPGIIPRLSVREPMVTGVKA 540
            AIVDVPVGDGLLGRVVDALGNPIDGKGPI +A+RSRVEVKAPGIIPRLSVREPM+TGVKA
Sbjct: 120  AIVDVPVGDGLLGRVVDALGNPIDGKGPINSAKRSRVEVKAPGIIPRLSVREPMLTGVKA 179

Query: 541  VDSLVPIGRGQRELIIGDRQTGKTAIAIDTIINQKRFNDAGDDKKKLFCIYVAVGQKRST 720
            VDSLVPIGRGQRELIIGDRQTGKTAIAIDTIINQKRFNDAGDDKKKLFCIYVAVGQKRST
Sbjct: 180  VDSLVPIGRGQRELIIGDRQTGKTAIAIDTIINQKRFNDAGDDKKKLFCIYVAVGQKRST 239

Query: 721  VAQIVKRLTDAGAMDYTIVVSATASDAAPLQFLAPYSGCAMGEHFRDNGKHALIIFDDLS 900
            VAQIVKRLTDAGAMDYTIVVSATASDAAPLQFLAPYSGCAMGE FRDNGKHALIIFDDLS
Sbjct: 240  VAQIVKRLTDAGAMDYTIVVSATASDAAPLQFLAPYSGCAMGEFFRDNGKHALIIFDDLS 299

Query: 901  KQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNNSLGGGSLTALPVIETQAG 1080
            KQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNN+LGGGSLTALPVIETQAG
Sbjct: 300  KQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNNTLGGGSLTALPVIETQAG 359

Query: 1081 DVSAYIPTNVISITDGQIFLETELFYKGVRPAINVGLSVSRVGSAAQTKAMKQVAGSMKL 1260
            DVSAYIPTNVISITDGQIFLETELFYKGVRPAINVGLSVSRVGSAAQTKAMKQVAGSMKL
Sbjct: 360  DVSAYIPTNVISITDGQIFLETELFYKGVRPAINVGLSVSRVGSAAQTKAMKQVAGSMKL 419

Query: 1261 ELAQYREVAAFAQFGSDLDASTQQLLNRGVRLTELLKQGQYVPMGIEEQVGVIYAGVKGY 1440
            ELAQYREVAAFAQFGSDLDA+TQQLLNRGVRLTELLKQGQYVPMGIEEQVGVIYAGVKG+
Sbjct: 420  ELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMGIEEQVGVIYAGVKGH 479

Query: 1441 LDKVDPSAITKFEKEFLAHLRSSQQALLKTIREEGQISPQTDAQLKDVVVNFLATFKP 1614
            LDKVDPSAITKFEKEFLAHLRSSQQALLKTIR+EGQISPQTDAQLKDVV NFLATFKP
Sbjct: 480  LDKVDPSAITKFEKEFLAHLRSSQQALLKTIRDEGQISPQTDAQLKDVVTNFLATFKP 537


>gi|42733088|emb|CAF31480.1| Hypothetical protein H28O16.1d
            [Caenorhabditis elegans]
          Length = 511

 Score =  949 bits (2452), Expect = 0.0
 Identities = 496/511 (97%), Positives = 496/511 (97%)
 Frame = +1

Query: 82   MAGASGSEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGI 261
            MAGASGSEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGI
Sbjct: 1    MAGASGSEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGI 60

Query: 262  KGMAMNLXXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKG 441
            KGMAMNL               IREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKG
Sbjct: 61   KGMAMNLDVDNVGVVVFGNDKVIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKG 120

Query: 442  PIANARRSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIA 621
            PIANARRSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIA
Sbjct: 121  PIANARRSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIA 180

Query: 622  IDTIINQKRFNDAGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDA 801
            IDTIINQKRFNDAGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDA
Sbjct: 181  IDTIINQKRFNDAGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDA 240

Query: 802  APLQFLAPYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVF 981
            APLQFLAPYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVF
Sbjct: 241  APLQFLAPYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVF 300

Query: 982  YLHSRLLERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYK 1161
            YLHSRLLERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYK
Sbjct: 301  YLHSRLLERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYK 360

Query: 1162 GVRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLN 1341
            GVRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLN
Sbjct: 361  GVRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLN 420

Query: 1342 RGVRLTELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQAL 1521
            RGVRLTELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQAL
Sbjct: 421  RGVRLTELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQAL 480

Query: 1522 LKTIREEGQISPQTDAQLKDVVVNFLATFKP 1614
            LKTIREEGQISPQTDAQLKDVVVNFLATFKP
Sbjct: 481  LKTIREEGQISPQTDAQLKDVVVNFLATFKP 511


>gi|31441843|emb|CAD92384.1| Hypothetical protein H28O16.1c
            [Caenorhabditis elegans]
          Length = 503

 Score =  932 bits (2408), Expect = 0.0
 Identities = 497/538 (92%), Positives = 498/538 (92%)
 Frame = +1

Query: 1    MLSKRIVTALNTAVKVQNAGIATTARGMAGASGSEVSKILEERILGTETGINLEETGKVL 180
            MLSKRIVTALNTAVKVQNAGIATTARGMAGASGSEVSKILEERILGTETGINLEETGKVL
Sbjct: 1    MLSKRIVTALNTAVKVQNAGIATTARGMAGASGSEVSKILEERILGTETGINLEETGKVL 60

Query: 181  SIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMNLXXXXXXXXXXXXXXXIREGDIVKRTG 360
            SIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMNL                     V   G
Sbjct: 61   SIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMNLD--------------------VDNVG 100

Query: 361  AIVDVPVGDGLLGRVVDALGNPIDGKGPIANARRSRVEVKAPGIIPRLSVREPMVTGVKA 540
             +V               LGNPIDGKGPIANARRSRVEVKAPGIIPRLSVREPMVTGVKA
Sbjct: 101  VVV---------------LGNPIDGKGPIANARRSRVEVKAPGIIPRLSVREPMVTGVKA 145

Query: 541  VDSLVPIGRGQRELIIGDRQTGKTAIAIDTIINQKRFNDAGDDKKKLFCIYVAVGQKRST 720
            VDSLVPIGRGQRELIIGDRQTGKTAIAIDTIINQKRFNDAGDDKKKLFCIYVAVGQKRST
Sbjct: 146  VDSLVPIGRGQRELIIGDRQTGKTAIAIDTIINQKRFNDAGDDKKKLFCIYVAVGQKRST 205

Query: 721  VAQIVKRLTDAGAMDYTIVVSATASDAAPLQFLAPYSGCAMGEHFRDNGKHALIIFDDLS 900
            VAQIVKRLTDAGAMDYTIVVSATASDAAPLQFLAPYSGCAMGEHFRDNGKHALIIFDDLS
Sbjct: 206  VAQIVKRLTDAGAMDYTIVVSATASDAAPLQFLAPYSGCAMGEHFRDNGKHALIIFDDLS 265

Query: 901  KQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNNSLGGGSLTALPVIETQAG 1080
            KQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNNSLGGGSLTALPVIETQAG
Sbjct: 266  KQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNNSLGGGSLTALPVIETQAG 325

Query: 1081 DVSAYIPTNVISITDGQIFLETELFYKGVRPAINVGLSVSRVGSAAQTKAMKQVAGSMKL 1260
            DVSAYIPTNVISITDGQIFLETELFYKGVRPAINVGLSVSRVGSAAQTKAMKQVAGSMKL
Sbjct: 326  DVSAYIPTNVISITDGQIFLETELFYKGVRPAINVGLSVSRVGSAAQTKAMKQVAGSMKL 385

Query: 1261 ELAQYREVAAFAQFGSDLDASTQQLLNRGVRLTELLKQGQYVPMGIEEQVGVIYAGVKGY 1440
            ELAQYREVAAFAQFGSDLDASTQQLLNRGVRLTELLKQGQYVPMGIEEQVGVIYAGVKGY
Sbjct: 386  ELAQYREVAAFAQFGSDLDASTQQLLNRGVRLTELLKQGQYVPMGIEEQVGVIYAGVKGY 445

Query: 1441 LDKVDPSAITKFEKEFLAHLRSSQQALLKTIREEGQISPQTDAQLKDVVVNFLATFKP 1614
            LDKVDPSAITKFEKEFLAHLRSSQQALLKTIREEGQISPQTDAQLKDVVVNFLATFKP
Sbjct: 446  LDKVDPSAITKFEKEFLAHLRSSQQALLKTIREEGQISPQTDAQLKDVVVNFLATFKP 503


>gi|48100966|ref|XP_392639.1| similar to ENSANGP00000009989 [Apis
            mellifera]
          Length = 547

 Score =  822 bits (2123), Expect = 0.0
 Identities = 428/543 (78%), Positives = 476/543 (86%), Gaps = 7/543 (1%)
 Frame = +1

Query: 1    MLSKRIVTAL-----NTAVKVQNAGIATTARGMAGAS--GSEVSKILEERILGTETGINL 159
            +LS R+V+++     NT ++V+     ++ +     S   +E+S ILEERILG     NL
Sbjct: 3    LLSLRLVSSIARQLPNTTIQVKWPLSISSCKYHVSCSRRSAEISSILEERILGASPKANL 62

Query: 160  EETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMNLXXXXXXXXXXXXXXXIREG 339
            EETG+VLSIGDGIARVYGLKNIQA+EMVEF SG+KGMA+NL               I+EG
Sbjct: 63   EETGRVLSIGDGIARVYGLKNIQADEMVEFSSGLKGMALNLEPDNVGVVVFGNDRHIKEG 122

Query: 340  DIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANARRSRVEVKAPGIIPRLSVREP 519
            DIVKRTGAIVDVPVG+ LLGRVVDALGNPIDGKGP+ +  R R+  KAPGIIPR+SVREP
Sbjct: 123  DIVKRTGAIVDVPVGEELLGRVVDALGNPIDGKGPLNSKLRFRIGTKAPGIIPRVSVREP 182

Query: 520  MVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIINQKRFNDAGDDKKKLFCIYVA 699
            M TG+KAVDSLVPIGRGQRELIIGDRQTGKTA+AIDTIINQKRFNDAG++KKKL+CIYVA
Sbjct: 183  MQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQKRFNDAGEEKKKLYCIYVA 242

Query: 700  VGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQFLAPYSGCAMGEHFRDNGKHAL 879
            +GQKRSTVAQIVKRLTD+GAMDYTI+VSATASDAAPLQ+LAPYSGCAMGE FRDNGKHAL
Sbjct: 243  IGQKRSTVAQIVKRLTDSGAMDYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHAL 302

Query: 880  IIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNNSLGGGSLTALP 1059
            II+DDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMN SLGGGSLTALP
Sbjct: 303  IIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNESLGGGSLTALP 362

Query: 1060 VIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPAINVGLSVSRVGSAAQTKAMKQ 1239
            VIETQAGDVSAYIPTNVISITDGQIFLETELFYKG+RPAINVGLSVSRVGSAAQTKAMKQ
Sbjct: 363  VIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTKAMKQ 422

Query: 1240 VAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRLTELLKQGQYVPMGIEEQVGVI 1419
            VAGSMKLELAQYREVAAFAQFGSDLDA+TQQLLNRGVRLTELLKQGQYVPM IEEQV VI
Sbjct: 423  VAGSMKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVI 482

Query: 1420 YAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQALLKTIREEGQISPQTDAQLKDVVVNFL 1599
            Y GV+GYLDK++P+ IT FEKEFLAH+R+SQ+ LL TI ++  IS  +DA+LK VV +FL
Sbjct: 483  YCGVRGYLDKMEPTKITAFEKEFLAHIRTSQRDLLNTIAKDNTISEASDAKLKQVVTDFL 542

Query: 1600 ATF 1608
            A+F
Sbjct: 543  ASF 545


>gi|31210101|ref|XP_314017.1| ENSANGP00000009989 [Anopheles gambiae]
 gi|30176660|gb|EAA09463.2| ENSANGP00000009989 [Anopheles gambiae str.
            PEST]
          Length = 549

 Score =  813 bits (2099), Expect = 0.0
 Identities = 419/524 (79%), Positives = 465/524 (87%)
 Frame = +1

Query: 37   AVKVQNAGIATTARGMAGASGSEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGL 216
            +V  +N  ++T  RG      +E+S ILEERILG     +LEETG+VLSIGDGIARVYGL
Sbjct: 32   SVAARNFHVSTAHRG------AEISAILEERILGAAPKADLEETGRVLSIGDGIARVYGL 85

Query: 217  KNIQAEEMVEFDSGIKGMAMNLXXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLL 396
            KNIQA+EMVEF SG+KGMA+NL               I+EGDIVKRTGAIVDVPVGD +L
Sbjct: 86   KNIQADEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGDEIL 145

Query: 397  GRVVDALGNPIDGKGPIANARRSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQR 576
            GRVVDALGN IDGKG I   +R RV +KAPGIIPR+SVREPM TG+KAVDSLVPIGRGQR
Sbjct: 146  GRVVDALGNAIDGKGEIKTKQRFRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQR 205

Query: 577  ELIIGDRQTGKTAIAIDTIINQKRFNDAGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAG 756
            ELIIGDRQTGKTA+AIDTIINQKRFND  D+ KKL+CIYVA+GQKRSTVAQIVKRLTD+G
Sbjct: 206  ELIIGDRQTGKTALAIDTIINQKRFNDGQDESKKLYCIYVAIGQKRSTVAQIVKRLTDSG 265

Query: 757  AMDYTIVVSATASDAAPLQFLAPYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLL 936
            AM+YTI+VSATASDAAPLQ+LAPYSGCAMGE+FRDNGKHALII+DDLSKQAVAYRQMSLL
Sbjct: 266  AMNYTIIVSATASDAAPLQYLAPYSGCAMGEYFRDNGKHALIIYDDLSKQAVAYRQMSLL 325

Query: 937  LRRPPGREAYPGDVFYLHSRLLERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVIS 1116
            LRRPPGREAYPGDVFYLHSRLLERAAKM+ +LGGGSLTALPVIETQAGDVSAYIPTNVIS
Sbjct: 326  LRRPPGREAYPGDVFYLHSRLLERAAKMSPTLGGGSLTALPVIETQAGDVSAYIPTNVIS 385

Query: 1117 ITDGQIFLETELFYKGVRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFA 1296
            ITDGQIFLETELFYKG+RPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFA
Sbjct: 386  ITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFA 445

Query: 1297 QFGSDLDASTQQLLNRGVRLTELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKF 1476
            QFGSDLDA+TQQLLNRGVRLTELLKQGQYVPM IEEQV VIY GV+GYLDK+DPS ITKF
Sbjct: 446  QFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGVRGYLDKMDPSKITKF 505

Query: 1477 EKEFLAHLRSSQQALLKTIREEGQISPQTDAQLKDVVVNFLATF 1608
            E+EFLAH++++++ALL+ I  EG+IS   DA+LK VV +F++TF
Sbjct: 506  EREFLAHVKTNEKALLQQIASEGKISDDADAKLKSVVTSFMSTF 549


>gi|32766606|gb|AAH54959.1| Atp5a1-prov protein [Xenopus laevis]
          Length = 553

 Score =  812 bits (2098), Expect = 0.0
 Identities = 426/552 (77%), Positives = 475/552 (85%), Gaps = 15/552 (2%)
 Frame = +1

Query: 1    MLSKRIVTALNTAVKVQNAGIATTARGMA-------GASGS--------EVSKILEERIL 135
            MLS R+  AL  A+  Q+  ++  A G A        ASG+        EVS ILEERIL
Sbjct: 1    MLSVRVAAALARALPRQSGLVSKKALGAAFVATRNIHASGAWLQKSGTAEVSSILEERIL 60

Query: 136  GTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMNLXXXXXXXXXXX 315
            G +   +LEETG+VLSIGDGIARVYGL+N+QAEEMVEF SG+KGM++NL
Sbjct: 61   GADISTDLEETGRVLSIGDGIARVYGLRNVQAEEMVEFSSGLKGMSLNLEPDNVGVVVFG 120

Query: 316  XXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANARRSRVEVKAPGII 495
                I+EGDIVKRTGAIVDVPVGD LLGRVVDALGN IDGKGP+ +  R RV +KAPGII
Sbjct: 121  NDKLIKEGDIVKRTGAIVDVPVGDELLGRVVDALGNAIDGKGPLTSKIRRRVGLKAPGII 180

Query: 496  PRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIINQKRFNDAGDDKK 675
            PR+SVREPM TG+KAVDSLV IGRGQRELIIGDRQTGKT+IAIDTIINQKRFN+  D+KK
Sbjct: 181  PRISVREPMQTGIKAVDSLVSIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNEGTDEKK 240

Query: 676  KLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQFLAPYSGCAMGEHF 855
            KL+CIYVA+GQKRSTVAQ+VKRLTDA AM YTIVVSATASDAAPLQ+LAPYSGC+MGE+F
Sbjct: 241  KLYCIYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYF 300

Query: 856  RDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNNSLG 1035
            RDNGKHALII+DDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMN+  G
Sbjct: 301  RDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDHFG 360

Query: 1036 GGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPAINVGLSVSRVGSA 1215
            GGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKG+RPAINVGLSVSRVGSA
Sbjct: 361  GGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSA 420

Query: 1216 AQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRLTELLKQGQYVPMG 1395
            AQT+AMKQVAG+MKLELAQYREVAAFAQFGSDLDA+TQQLLNRGVRLTELLKQGQYVPM
Sbjct: 421  AQTRAMKQVAGTMKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMA 480

Query: 1396 IEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQALLKTIREEGQISPQTDAQL 1575
            IEEQV VIYAGV+G+LDK++PS ITKFE  FLAH++S  Q LL TIR +G+IS Q DA+L
Sbjct: 481  IEEQVTVIYAGVRGHLDKMEPSKITKFESAFLAHVKSQHQELLATIRTDGKISEQADAKL 540

Query: 1576 KDVVVNFLATFK 1611
            K++V+NFL+TF+
Sbjct: 541  KEIVLNFLSTFE 552


>gi|15030240|gb|AAH11384.1| ATP synthase, H+ transporting,
            mitochondrial F1 complex, alpha subunit, isoform 1,
            cardiac muscle [Homo sapiens]
          Length = 553

 Score =  811 bits (2095), Expect = 0.0
 Identities = 413/504 (81%), Positives = 459/504 (90%)
 Frame = +1

Query: 100  SEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMN 279
            +E+S ILEERILG +T ++LEETG+VLSIGDGIARV+GL+N+QAEEMVEF SG+KGM++N
Sbjct: 49   AEMSSILEERILGADTSVDLEETGRVLSIGDGIARVHGLRNVQAEEMVEFSSGLKGMSLN 108

Query: 280  LXXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANAR 459
            L               I+EGDIVKRTGAIVDVPVG+ LLGRVVDALGN IDGKGPI +
Sbjct: 109  LEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIGSKT 168

Query: 460  RSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIIN 639
            R RV +KAPGIIPR+SVREPM TG+KAVDSLVPIGRGQRELIIGDRQTGKT+IAIDTIIN
Sbjct: 169  RRRVGLKAPGIIPRISVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIIN 228

Query: 640  QKRFNDAGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQFL 819
            QKRFND  D+KKKL+CIYVA+GQKRSTVAQ+VKRLTDA AM YTIVVSATASDAAPLQ+L
Sbjct: 229  QKRFNDGSDEKKKLYCIYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYL 288

Query: 820  APYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL 999
            APYSGC+MGE+FRDNGKHALII+DDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL
Sbjct: 289  APYSGCSMGEYFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL 348

Query: 1000 LERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPAI 1179
            LERAAKMN++ GGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKG+RPAI
Sbjct: 349  LERAAKMNDAFGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAI 408

Query: 1180 NVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRLT 1359
            NVGLSVSRVGSAAQT+AMKQVAG+MKLELAQYREVAAFAQFGSDLDA+TQQLL+RGVRLT
Sbjct: 409  NVGLSVSRVGSAAQTRAMKQVAGTMKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLT 468

Query: 1360 ELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQALLKTIRE 1539
            ELLKQGQY PM IEEQV VIYAGV+GYLDK++PS ITKFE +FL+H+ S  QALL TIR
Sbjct: 469  ELLKQGQYSPMAIEEQVAVIYAGVRGYLDKLEPSKITKFENDFLSHVVSQHQALLGTIRA 528

Query: 1540 EGQISPQTDAQLKDVVVNFLATFK 1611
            EG+IS Q+DA+LK++V NFLA F+
Sbjct: 529  EGKISEQSDAKLKEIVTNFLAGFE 552


>gi|40538742|ref|NP_075581.1| mitochondrial H+-ATP synthase alpha
            subunit [Rattus norvegicus]
 gi|38512279|gb|AAH61830.1| Mitochondrial H+-ATP synthase alpha
            subunit [Rattus norvegicus]
          Length = 553

 Score =  810 bits (2091), Expect = 0.0
 Identities = 412/505 (81%), Positives = 458/505 (90%)
 Frame = +1

Query: 100  SEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMN 279
            +E+S ILEERILG +T ++LEETG+VLSIGDGIARV+GL+N+QAEEMVEF SG+KGM++N
Sbjct: 49   AEMSSILEERILGADTSVDLEETGRVLSIGDGIARVHGLRNVQAEEMVEFSSGLKGMSLN 108

Query: 280  LXXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANAR 459
            L               I+EGDIVKRTGAIVDVPVGD LLGRVVDALGN IDGKGP+ +
Sbjct: 109  LEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGDELLGRVVDALGNAIDGKGPVGSKI 168

Query: 460  RSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIIN 639
            R RV +KAPGIIPR+SVREPM TG+KAVDSLVPIGRGQRELIIGDRQTGKT+IAIDTIIN
Sbjct: 169  RRRVGLKAPGIIPRISVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIIN 228

Query: 640  QKRFNDAGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQFL 819
            QKRFND  D+KKKL+CIYVA+GQKRSTVAQ+VKRLTDA AM YTIVVSATASDAAPLQ+L
Sbjct: 229  QKRFNDGTDEKKKLYCIYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYL 288

Query: 820  APYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL 999
            APYSGC+MGE+FRDNGKHALII+DDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL
Sbjct: 289  APYSGCSMGEYFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL 348

Query: 1000 LERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPAI 1179
            LERAAKMN+S GGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKG+RPAI
Sbjct: 349  LERAAKMNDSFGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAI 408

Query: 1180 NVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRLT 1359
            NVGLSVSRVGSAAQT+AMKQVAG+MKLELAQYREVAAFAQFGSDLDA+TQQLL+RGVRLT
Sbjct: 409  NVGLSVSRVGSAAQTRAMKQVAGTMKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLT 468

Query: 1360 ELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQALLKTIRE 1539
            ELLKQGQY PM IEEQV VIYAGV+GYLDK++PS ITKFE  FL+H+ S  Q+LL  IR
Sbjct: 469  ELLKQGQYSPMAIEEQVAVIYAGVRGYLDKLEPSKITKFESAFLSHVVSQHQSLLGNIRS 528

Query: 1540 EGQISPQTDAQLKDVVVNFLATFKP 1614
            +G+IS Q+DA+LK++V NFLA F+P
Sbjct: 529  DGKISEQSDAKLKEIVTNFLAGFEP 553


>gi|114523|sp|P15999|ATPA_RAT ATP synthase alpha chain, mitochondrial
            precursor
 gi|111745|pir||A35730 H+-transporting two-sector ATPase (EC 3.6.3.14)
            alpha chain precursor - rat (fragment)
 gi|203055|gb|AAA40784.1| ATP synthase alpha subunit precursor (EC
            3.6.1.3)
          Length = 543

 Score =  810 bits (2091), Expect = 0.0
 Identities = 412/505 (81%), Positives = 458/505 (90%)
 Frame = +1

Query: 100  SEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMN 279
            +E+S ILEERILG +T ++LEETG+VLSIGDGIARV+GL+N+QAEEMVEF SG+KGM++N
Sbjct: 39   AEMSSILEERILGADTSVDLEETGRVLSIGDGIARVHGLRNVQAEEMVEFSSGLKGMSLN 98

Query: 280  LXXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANAR 459
            L               I+EGDIVKRTGAIVDVPVGD LLGRVVDALGN IDGKGP+ +
Sbjct: 99   LEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGDELLGRVVDALGNAIDGKGPVGSKI 158

Query: 460  RSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIIN 639
            R RV +KAPGIIPR+SVREPM TG+KAVDSLVPIGRGQRELIIGDRQTGKT+IAIDTIIN
Sbjct: 159  RRRVGLKAPGIIPRISVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIIN 218

Query: 640  QKRFNDAGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQFL 819
            QKRFND  D+KKKL+CIYVA+GQKRSTVAQ+VKRLTDA AM YTIVVSATASDAAPLQ+L
Sbjct: 219  QKRFNDGTDEKKKLYCIYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYL 278

Query: 820  APYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL 999
            APYSGC+MGE+FRDNGKHALII+DDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL
Sbjct: 279  APYSGCSMGEYFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL 338

Query: 1000 LERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPAI 1179
            LERAAKMN+S GGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKG+RPAI
Sbjct: 339  LERAAKMNDSFGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAI 398

Query: 1180 NVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRLT 1359
            NVGLSVSRVGSAAQT+AMKQVAG+MKLELAQYREVAAFAQFGSDLDA+TQQLL+RGVRLT
Sbjct: 399  NVGLSVSRVGSAAQTRAMKQVAGTMKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLT 458

Query: 1360 ELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQALLKTIRE 1539
            ELLKQGQY PM IEEQV VIYAGV+GYLDK++PS ITKFE  FL+H+ S  Q+LL  IR
Sbjct: 459  ELLKQGQYSPMAIEEQVAVIYAGVRGYLDKLEPSKITKFESAFLSHVVSQHQSLLGNIRS 518

Query: 1540 EGQISPQTDAQLKDVVVNFLATFKP 1614
            +G+IS Q+DA+LK++V NFLA F+P
Sbjct: 519  DGKISEQSDAKLKEIVTNFLAGFEP 543


>gi|6729934|pdb|1MAB|A Chain A, Rat Liver F1-Atpase
          Length = 510

 Score =  809 bits (2090), Expect = 0.0
 Identities = 412/505 (81%), Positives = 458/505 (90%)
 Frame = +1

Query: 100  SEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMN 279
            +E+S ILEERILG +T ++LEETG+VLSIGDGIARV+GL+N+QAEEMVEF SG+KGM++N
Sbjct: 6    AEMSSILEERILGADTSVDLEETGRVLSIGDGIARVHGLRNVQAEEMVEFSSGLKGMSLN 65

Query: 280  LXXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANAR 459
            L               I+EGDIVKRTGAIVDVPVGD LLGRVVDALGN IDGKGP+ +
Sbjct: 66   LEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGDELLGRVVDALGNAIDGKGPVGSKI 125

Query: 460  RSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIIN 639
            R RV +KAPGIIPR+SVREPM TG+KAVDSLVPIGRGQRELIIGDRQTGKT+IAIDTIIN
Sbjct: 126  RRRVGLKAPGIIPRISVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIIN 185

Query: 640  QKRFNDAGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQFL 819
            QKRFND  D+KKKL+CIYVA+GQKRSTVAQ+VKRLTDA AM YTIVVSATASDAAPLQ+L
Sbjct: 186  QKRFNDGTDEKKKLYCIYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYL 245

Query: 820  APYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL 999
            APYSGC+MGE+FRDNGKHALII+DDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL
Sbjct: 246  APYSGCSMGEYFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL 305

Query: 1000 LERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPAI 1179
            LERAAKMN+S GGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKG+RPAI
Sbjct: 306  LERAAKMNDSFGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAI 365

Query: 1180 NVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRLT 1359
            NVGLSVSRVGSAAQT+AMKQVAG+MKLELAQYREVAAFAQFGSDLDA+TQQLL+RGVRLT
Sbjct: 366  NVGLSVSRVGSAAQTRAMKQVAGTMKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLT 425

Query: 1360 ELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQALLKTIRE 1539
            ELLKQGQY PM IEEQV VIYAGV+GYLDK++PS ITKFE  FL+H+ S  Q+LL  IR
Sbjct: 426  ELLKQGQYSPMAIEEQVAVIYAGVRGYLDKLEPSKITKFESAFLSHVVSQHQSLLGNIRT 485

Query: 1540 EGQISPQTDAQLKDVVVNFLATFKP 1614
            +G+IS Q+DA+LK++V NFLA F+P
Sbjct: 486  DGKISEQSDAKLKEIVTNFLAGFEP 510


>gi|30585339|gb|AAP36942.1| Homo sapiens ATP synthase, H+
            transporting, mitochondrial F1 complex, alpha subunit,
            isoform 1, cardiac muscle [synthetic construct]
          Length = 554

 Score =  809 bits (2089), Expect = 0.0
 Identities = 412/504 (81%), Positives = 458/504 (90%)
 Frame = +1

Query: 100  SEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMN 279
            +E+S ILEERILG +T ++LEETG+VLSIGDGIARV+GL+N+QAEEMVEF SG+KGM++N
Sbjct: 49   AEMSSILEERILGADTSVDLEETGRVLSIGDGIARVHGLRNVQAEEMVEFSSGLKGMSLN 108

Query: 280  LXXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANAR 459
            L               I+EGDIVKRTGAIVDVPVG+ LLGRVVDALGN IDGKGPI +
Sbjct: 109  LEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIGSKT 168

Query: 460  RSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIIN 639
            R RV +KAPGIIPR+SVREPM TG+KAVDSLVPIGRGQRELIIGDRQTGKT+IAIDTIIN
Sbjct: 169  RRRVGLKAPGIIPRISVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIIN 228

Query: 640  QKRFNDAGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQFL 819
            QKRFND  D+KKKL+CIYVA+GQKRSTVAQ+VKRLTDA AM YTIVVSATASDAAPLQ+L
Sbjct: 229  QKRFNDGSDEKKKLYCIYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYL 288

Query: 820  APYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL 999
            APYSGC+MGE+FRDNGKHALII+DDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL
Sbjct: 289  APYSGCSMGEYFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL 348

Query: 1000 LERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPAI 1179
            LERAAKMN++ GGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKG+RPAI
Sbjct: 349  LERAAKMNDAFGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAI 408

Query: 1180 NVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRLT 1359
            NVGLSVSRVGSAAQT+AMKQVAG+MKLELAQYREVAAFAQFGSDLDA+TQQLL+RGVRLT
Sbjct: 409  NVGLSVSRVGSAAQTRAMKQVAGTMKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLT 468

Query: 1360 ELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQALLKTIRE 1539
            ELLKQGQY PM IEEQV VIYAGV+GYLDK++PS ITKFE  FL+H+ S  QALL TIR
Sbjct: 469  ELLKQGQYSPMAIEEQVAVIYAGVRGYLDKLEPSKITKFENAFLSHVVSQHQALLGTIRA 528

Query: 1540 EGQISPQTDAQLKDVVVNFLATFK 1611
            +G+IS Q+DA+LK++V NFLA F+
Sbjct: 529  DGKISEQSDAKLKEIVTNFLAGFE 552


>gi|4757810|ref|NP_004037.1| ATP synthase, H+ transporting,
            mitochondrial F1 complex, alpha subunit isoform a
            precursor; ATP synthase, H+ transporting, mitochondrial
            F1 complex, alpha subunit, isoform 2, non-cardiac
            muscle-like 2; mitochondrial ATP synthetase,
            oligomycin-resistant; ATP synthase alpha chain,
            mitochondrial [Homo sapiens]
 gi|50345984|ref|NP_001001937.1| ATP synthase, H+ transporting,
            mitochondrial F1 complex, alpha subunit isoform a
            precursor; ATP synthase, H+ transporting, mitochondrial
            F1 complex, alpha subunit, isoform 2, non-cardiac
            muscle-like 2; mitochondrial ATP synthetase,
            oligomycin-resistant; ATP synthase alpha chain,
            mitochondrial [Homo sapiens]
 gi|114517|sp|P25705|ATPA_HUMAN ATP synthase alpha chain,
            mitochondrial precursor
 gi|67811|pir||PWHUA H+-transporting two-sector ATPase (EC 3.6.3.14)
            alpha chain precursor - human
 gi|28938|emb|CAA41789.1| H(+)-transporting ATP synthase [Homo
            sapiens]
 gi|34468|emb|CAA46452.1| ATP synthase alpha subunit [Homo sapiens]
 gi|559317|dbj|BAA05672.1| ATP synthase alpha subunit [Homo sapiens]
 gi|559325|dbj|BAA03531.1| ATP synthase alpha subunit [Homo sapiens]
 gi|16359160|gb|AAH16046.1| ATP synthase, H+ transporting,
            mitochondrial F1 complex, alpha subunit, isoform 1,
            cardiac muscle [Homo sapiens]
 gi|17939539|gb|AAH19310.1| ATP synthase, H+ transporting,
            mitochondrial F1 complex, alpha subunit, isoform 1,
            cardiac muscle [Homo sapiens]
 gi|30583257|gb|AAP35873.1| ATP synthase, H+ transporting,
            mitochondrial F1 complex, alpha subunit, isoform 1,
            cardiac muscle [Homo sapiens]
 gi|40352910|gb|AAH64562.1| ATP synthase, H+ transporting,
            mitochondrial F1 complex, alpha subunit, isoform 1,
            cardiac muscle [Homo sapiens]
 gi|45709753|gb|AAH67385.1| ATP synthase, H+ transporting,
            mitochondrial F1 complex, alpha subunit, isoform 1,
            cardiac muscle [Homo sapiens]
 gi|1090507|prf||2019238A ATP synthase:SUBUNIT=alpha
          Length = 553

 Score =  809 bits (2089), Expect = 0.0
 Identities = 412/504 (81%), Positives = 458/504 (90%)
 Frame = +1

Query: 100  SEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMN 279
            +E+S ILEERILG +T ++LEETG+VLSIGDGIARV+GL+N+QAEEMVEF SG+KGM++N
Sbjct: 49   AEMSSILEERILGADTSVDLEETGRVLSIGDGIARVHGLRNVQAEEMVEFSSGLKGMSLN 108

Query: 280  LXXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANAR 459
            L               I+EGDIVKRTGAIVDVPVG+ LLGRVVDALGN IDGKGPI +
Sbjct: 109  LEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIGSKT 168

Query: 460  RSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIIN 639
            R RV +KAPGIIPR+SVREPM TG+KAVDSLVPIGRGQRELIIGDRQTGKT+IAIDTIIN
Sbjct: 169  RRRVGLKAPGIIPRISVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIIN 228

Query: 640  QKRFNDAGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQFL 819
            QKRFND  D+KKKL+CIYVA+GQKRSTVAQ+VKRLTDA AM YTIVVSATASDAAPLQ+L
Sbjct: 229  QKRFNDGSDEKKKLYCIYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYL 288

Query: 820  APYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL 999
            APYSGC+MGE+FRDNGKHALII+DDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL
Sbjct: 289  APYSGCSMGEYFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL 348

Query: 1000 LERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPAI 1179
            LERAAKMN++ GGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKG+RPAI
Sbjct: 349  LERAAKMNDAFGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAI 408

Query: 1180 NVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRLT 1359
            NVGLSVSRVGSAAQT+AMKQVAG+MKLELAQYREVAAFAQFGSDLDA+TQQLL+RGVRLT
Sbjct: 409  NVGLSVSRVGSAAQTRAMKQVAGTMKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLT 468

Query: 1360 ELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQALLKTIRE 1539
            ELLKQGQY PM IEEQV VIYAGV+GYLDK++PS ITKFE  FL+H+ S  QALL TIR
Sbjct: 469  ELLKQGQYSPMAIEEQVAVIYAGVRGYLDKLEPSKITKFENAFLSHVVSQHQALLGTIRA 528

Query: 1540 EGQISPQTDAQLKDVVVNFLATFK 1611
            +G+IS Q+DA+LK++V NFLA F+
Sbjct: 529  DGKISEQSDAKLKEIVTNFLAGFE 552


>gi|45383566|ref|NP_989617.1| ATP synthase, H+ transporting,
            mitochondrial F1 complex, alpha subunit [Gallus gallus]
 gi|17225596|gb|AAL37491.1| ATP synthase alpha subunit [Gallus gallus]
          Length = 553

 Score =  809 bits (2089), Expect = 0.0
 Identities = 414/504 (82%), Positives = 454/504 (89%)
 Frame = +1

Query: 100  SEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMN 279
            +EVS ILEERILG +T   LEETG+VLSIGDGIARVYGL+N+QAEEMVEF  G+KGM++N
Sbjct: 49   AEVSSILEERILGADTSAELEETGRVLSIGDGIARVYGLRNVQAEEMVEFFFGLKGMSLN 108

Query: 280  LXXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANAR 459
            L               I+EGD+VKRTGAIVDVPVG+ LLGRVV ALGNPIDGKGPI +
Sbjct: 109  LEPDNVGVVVFGNDRLIKEGDVVKRTGAIVDVPVGEELLGRVVVALGNPIDGKGPITSKT 168

Query: 460  RSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIIN 639
            R RV +KAPGIIPR+SVREPM TG+KAVDSLVPIGRGQRELIIGDRQTGKT+IAIDTIIN
Sbjct: 169  RRRVGLKAPGIIPRISVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIIN 228

Query: 640  QKRFNDAGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQFL 819
            QKRFND  D+KKKL+CIYVA+GQKRSTVAQ+VKRLTDA AM YTIVVSATASDAAPLQ+L
Sbjct: 229  QKRFNDGTDEKKKLYCIYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYL 288

Query: 820  APYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL 999
            APYSGC+MGE+FRDNGKHALII+DDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL
Sbjct: 289  APYSGCSMGEYFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL 348

Query: 1000 LERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPAI 1179
            LERAAKMN+S GGGSLTALP IETQAGDVSAYIPTNVISITDGQIFLETELFYKG+RPAI
Sbjct: 349  LERAAKMNDSFGGGSLTALPAIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAI 408

Query: 1180 NVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRLT 1359
            NVGLSVSRVGSAAQT+AMKQVAG+MKLELAQYREVAAFAQFGSDLDA+TQQLLNRGVRLT
Sbjct: 409  NVGLSVSRVGSAAQTRAMKQVAGTMKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLT 468

Query: 1360 ELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQALLKTIRE 1539
            ELLKQGQYVPM IEEQV VIYAGVK +LDK++PS ITKFE  FLAH+ S  QALL TIR
Sbjct: 469  ELLKQGQYVPMAIEEQVAVIYAGVKSHLDKLEPSKITKFESAFLAHVLSQHQALLSTIRT 528

Query: 1540 EGQISPQTDAQLKDVVVNFLATFK 1611
            EG+IS QT+A+LK++  NFL+TF+
Sbjct: 529  EGKISDQTEAKLKEIFTNFLSTFE 552


>gi|6680748|ref|NP_031531.1| ATP synthase, H+ transporting,
            mitochondrial F1 complex, alpha subunit, isoform 1 [Mus
            musculus]
 gi|416677|sp|Q03265|ATPA_MOUSE ATP synthase alpha chain,
            mitochondrial precursor
 gi|346726|pir||JC1473 H+-transporting two-sector ATPase (EC 3.6.3.14)
            alpha chain - mouse
 gi|192090|gb|AAA37271.1| ATP synthase alpha subunit
 gi|15928789|gb|AAH14854.1| ATP synthase, H+ transporting,
            mitochondrial F1 complex, alpha subunit, isoform 1 [Mus
            musculus]
 gi|26336074|dbj|BAC31722.1| unnamed protein product [Mus musculus]
 gi|26345496|dbj|BAC36399.1| unnamed protein product [Mus musculus]
          Length = 553

 Score =  809 bits (2089), Expect = 0.0
 Identities = 411/505 (81%), Positives = 458/505 (90%)
 Frame = +1

Query: 100  SEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMN 279
            +E+S ILEERILG +T ++LEETG+VLSIGDGIARV+GL+N+QAEEMVEF SG+KGM++N
Sbjct: 49   AEMSSILEERILGADTSVDLEETGRVLSIGDGIARVHGLRNVQAEEMVEFSSGLKGMSLN 108

Query: 280  LXXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANAR 459
            L               I+EGD+VKRTGAIVDVPVG+ LLGRVVDALGN IDGKGPI +
Sbjct: 109  LEPDNVGVVVFGNDKLIKEGDVVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIGSKT 168

Query: 460  RSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIIN 639
            R RV +KAPGIIPR+SVREPM TG+KAVDSLVPIGRGQRELIIGDRQTGKT+IAIDTIIN
Sbjct: 169  RRRVGLKAPGIIPRISVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIIN 228

Query: 640  QKRFNDAGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQFL 819
            QKRFND  D+KKKL+CIYVA+GQKRSTVAQ+VKRLTDA AM YTIVVSATASDAAPLQ+L
Sbjct: 229  QKRFNDGTDEKKKLYCIYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYL 288

Query: 820  APYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL 999
            APYSGC+MGE+FRDNGKHALII+DDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL
Sbjct: 289  APYSGCSMGEYFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL 348

Query: 1000 LERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPAI 1179
            LERAAKMN+S GGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKG+RPAI
Sbjct: 349  LERAAKMNDSFGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAI 408

Query: 1180 NVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRLT 1359
            NVGLSVSRVGSAAQT+AMKQVAG+MKLELAQYREVAAFAQFGSDLDA+TQQLL+RGVRLT
Sbjct: 409  NVGLSVSRVGSAAQTRAMKQVAGTMKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLT 468

Query: 1360 ELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQALLKTIRE 1539
            ELLKQGQY PM IEEQV VIYAGV+GYLDK++PS ITKFE  FL+H+ S  Q+LL  IR
Sbjct: 469  ELLKQGQYSPMAIEEQVAVIYAGVRGYLDKLEPSKITKFENAFLSHVISQHQSLLGNIRS 528

Query: 1540 EGQISPQTDAQLKDVVVNFLATFKP 1614
            +G+IS Q+DA+LK++V NFLA F+P
Sbjct: 529  DGKISEQSDAKLKEIVTNFLAGFEP 553


>gi|27807237|ref|NP_777109.1| ATP synthase, H+ transporting,
            mitochondrial F1 complex, alpha subunit [Bos taurus]
 gi|114402|sp|P19483|ATP0_BOVIN ATP synthase alpha chain heart
            isoform, mitochondrial precursor
 gi|1070503|pir||PWBOA H+-transporting two-sector ATPase (EC 3.6.3.14)
            alpha chain precursor, cardiac [validated] - bovine
 gi|102|emb|CAA45865.1| H(+)-transporting ATP synthase [Bos taurus]
 gi|162721|gb|AAB59266.1| alpha subunit ATP synthase isoform precursor
            (EC 3.6.1.34)
          Length = 553

 Score =  806 bits (2083), Expect = 0.0
 Identities = 411/504 (81%), Positives = 457/504 (90%)
 Frame = +1

Query: 100  SEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMN 279
            +EVS ILEERILG +T ++LEETG+VLSIGDGIARV+GL+N+QAEEMVEF SG+KGM++N
Sbjct: 49   AEVSSILEERILGADTSVDLEETGRVLSIGDGIARVHGLRNVQAEEMVEFSSGLKGMSLN 108

Query: 280  LXXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANAR 459
            L               I+EGDIVKRTGAIVDVPVG+ LLGRVVDALGN IDGKGPI +
Sbjct: 109  LEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIGSKA 168

Query: 460  RSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIIN 639
            R RV +KAPGIIPR+SVREPM TG+KAVDSLVPIGRGQRELIIGDRQTGKT+IAIDTIIN
Sbjct: 169  RRRVGLKAPGIIPRISVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIIN 228

Query: 640  QKRFNDAGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQFL 819
            QKRFND  D+KKKL+CIYVA+GQKRSTVAQ+VKRLTDA AM YTIVVSATASDAAPLQ+L
Sbjct: 229  QKRFNDGTDEKKKLYCIYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYL 288

Query: 820  APYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL 999
            APYSGC+MGE+FRDNGKHALII+DDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL
Sbjct: 289  APYSGCSMGEYFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL 348

Query: 1000 LERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPAI 1179
            LERAAKMN++ GGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKG+RPAI
Sbjct: 349  LERAAKMNDAFGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAI 408

Query: 1180 NVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRLT 1359
            NVGLSVSRVGSAAQT+AMKQVAG+MKLELAQYREVAAFAQFGSDLDA+TQQLL+RGVRLT
Sbjct: 409  NVGLSVSRVGSAAQTRAMKQVAGTMKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLT 468

Query: 1360 ELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQALLKTIRE 1539
            ELLKQGQY PM IEEQV VIYAGV+GYLDK++PS ITKFE  FL+H+ S  QALL  IR
Sbjct: 469  ELLKQGQYSPMAIEEQVAVIYAGVRGYLDKLEPSKITKFENAFLSHVISQHQALLSKIRT 528

Query: 1540 EGQISPQTDAQLKDVVVNFLATFK 1611
            +G+IS ++DA+LK++V NFLA F+
Sbjct: 529  DGKISEESDAKLKEIVTNFLAGFE 552


>gi|50345982|ref|NP_001001935.1| ATP synthase, H+ transporting,
            mitochondrial F1 complex, alpha subunit isoform b; ATP
            synthase, H+ transporting, mitochondrial F1 complex,
            alpha subunit, isoform 2, non-cardiac muscle-like 2;
            mitochondrial ATP synthetase, oligomycin-resistant; ATP
            synthase alpha chain, mitochondrial [Homo sapiens]
          Length = 503

 Score =  806 bits (2083), Expect = 0.0
 Identities = 411/502 (81%), Positives = 456/502 (89%)
 Frame = +1

Query: 106  VSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMNLX 285
            +S ILEERILG +T ++LEETG+VLSIGDGIARV+GL+N+QAEEMVEF SG+KGM++NL
Sbjct: 1    MSSILEERILGADTSVDLEETGRVLSIGDGIARVHGLRNVQAEEMVEFSSGLKGMSLNLE 60

Query: 286  XXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANARRS 465
                          I+EGDIVKRTGAIVDVPVG+ LLGRVVDALGN IDGKGPI +  R
Sbjct: 61   PDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIGSKTRR 120

Query: 466  RVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIINQK 645
            RV +KAPGIIPR+SVREPM TG+KAVDSLVPIGRGQRELIIGDRQTGKT+IAIDTIINQK
Sbjct: 121  RVGLKAPGIIPRISVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQK 180

Query: 646  RFNDAGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQFLAP 825
            RFND  D+KKKL+CIYVA+GQKRSTVAQ+VKRLTDA AM YTIVVSATASDAAPLQ+LAP
Sbjct: 181  RFNDGSDEKKKLYCIYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAP 240

Query: 826  YSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLE 1005
            YSGC+MGE+FRDNGKHALII+DDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLE
Sbjct: 241  YSGCSMGEYFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLE 300

Query: 1006 RAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPAINV 1185
            RAAKMN++ GGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKG+RPAINV
Sbjct: 301  RAAKMNDAFGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINV 360

Query: 1186 GLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRLTEL 1365
            GLSVSRVGSAAQT+AMKQVAG+MKLELAQYREVAAFAQFGSDLDA+TQQLL+RGVRLTEL
Sbjct: 361  GLSVSRVGSAAQTRAMKQVAGTMKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTEL 420

Query: 1366 LKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQALLKTIREEG 1545
            LKQGQY PM IEEQV VIYAGV+GYLDK++PS ITKFE  FL+H+ S  QALL TIR +G
Sbjct: 421  LKQGQYSPMAIEEQVAVIYAGVRGYLDKLEPSKITKFENAFLSHVVSQHQALLGTIRADG 480

Query: 1546 QISPQTDAQLKDVVVNFLATFK 1611
            +IS Q+DA+LK++V NFLA F+
Sbjct: 481  KISEQSDAKLKEIVTNFLAGFE 502


>gi|24660110|gb|AAH39135.1| ATP5A1 protein [Homo sapiens]
          Length = 564

 Score =  806 bits (2082), Expect = 0.0
 Identities = 411/504 (81%), Positives = 457/504 (90%)
 Frame = +1

Query: 100  SEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMN 279
            +E+S ILEERILG +T ++LEETG+VLSIGDGIARV+GL+N+QAEEMVEF SG+KGM++N
Sbjct: 60   AEMSSILEERILGADTSVDLEETGRVLSIGDGIARVHGLRNVQAEEMVEFSSGLKGMSLN 119

Query: 280  LXXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANAR 459
            L               I+EGDIVKRTGAIVDVPVG+ LLGRVVDALGN IDGKGPI +
Sbjct: 120  LEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIGSKT 179

Query: 460  RSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIIN 639
            R RV +KAPGIIPR+SVREPM TG+KAVDSLVPIGRGQRELIIGDRQTGKT+IAIDTIIN
Sbjct: 180  RRRVGLKAPGIIPRISVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIIN 239

Query: 640  QKRFNDAGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQFL 819
            QKRFND  D+KKKL+CIYVA+GQKRSTVAQ+VKRLTDA AM YTIVVSATASDAAPLQ+L
Sbjct: 240  QKRFNDGSDEKKKLYCIYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYL 299

Query: 820  APYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL 999
            APYSGC+MGE+FRDNGKHALII+DDLSKQAVAYRQMSLLL RPPGREAYPGDVFYLHSRL
Sbjct: 300  APYSGCSMGEYFRDNGKHALIIYDDLSKQAVAYRQMSLLLLRPPGREAYPGDVFYLHSRL 359

Query: 1000 LERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPAI 1179
            LERAAKMN++ GGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKG+RPAI
Sbjct: 360  LERAAKMNDAFGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAI 419

Query: 1180 NVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRLT 1359
            NVGLSVSRVGSAAQT+AMKQVAG+MKLELAQYREVAAFAQFGSDLDA+TQQLL+RGVRLT
Sbjct: 420  NVGLSVSRVGSAAQTRAMKQVAGTMKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLT 479

Query: 1360 ELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQALLKTIRE 1539
            ELLKQGQY PM IEEQV VIYAGV+GYLDK++PS ITKFE  FL+H+ S  QALL TIR
Sbjct: 480  ELLKQGQYSPMAIEEQVAVIYAGVRGYLDKLEPSKITKFENAFLSHVVSQHQALLGTIRA 539

Query: 1540 EGQISPQTDAQLKDVVVNFLATFK 1611
            +G+IS Q+DA+LK++V NFLA F+
Sbjct: 540  DGKISEQSDAKLKEIVTNFLAGFE 563


>gi|1827809|pdb|1COW|A Chain A, Bovine Mitochondrial F1-Atpase
            Complexed With Aurovertin B
 gi|1827810|pdb|1COW|B Chain B, Bovine Mitochondrial F1-Atpase
            Complexed With Aurovertin B
 gi|1827811|pdb|1COW|C Chain C, Bovine Mitochondrial F1-Atpase
            Complexed With Aurovertin B
 gi|1942368|pdb|1EFR|A Chain A, Bovine Mitochondrial F1-Atpase
            Complexed With The Peptide Antibiotic Efrapeptin
 gi|1942369|pdb|1EFR|B Chain B, Bovine Mitochondrial F1-Atpase
            Complexed With The Peptide Antibiotic Efrapeptin
 gi|1942370|pdb|1EFR|C Chain C, Bovine Mitochondrial F1-Atpase
            Complexed With The Peptide Antibiotic Efrapeptin
          Length = 510

 Score =  806 bits (2081), Expect = 0.0
 Identities = 411/504 (81%), Positives = 457/504 (90%)
 Frame = +1

Query: 100  SEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMN 279
            +EVS ILEERILG +T ++LEETG+VLSIGDGIARV+GL+N+QAEEMVEF SG+KGM++N
Sbjct: 6    AEVSSILEERILGADTSVDLEETGRVLSIGDGIARVHGLRNVQAEEMVEFSSGLKGMSLN 65

Query: 280  LXXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANAR 459
            L               I+EGDIVKRTGAIVDVPVG+ LLGRVVDALGN IDGKGPI +
Sbjct: 66   LEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIGSKA 125

Query: 460  RSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIIN 639
            R RV +KAPGIIPR+SVREPM TG+KAVDSLVPIGRGQRELIIGDRQTGKT+IAIDTIIN
Sbjct: 126  RRRVGLKAPGIIPRISVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIIN 185

Query: 640  QKRFNDAGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQFL 819
            QKRFND  D+KKKL+CIYVA+GQKRSTVAQ+VKRLTDA AM YTIVVSATASDAAPLQ+L
Sbjct: 186  QKRFNDGTDEKKKLYCIYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYL 245

Query: 820  APYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL 999
            APYSGC+MGE+FRDNGKHALII+DDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL
Sbjct: 246  APYSGCSMGEYFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL 305

Query: 1000 LERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPAI 1179
            LERAAKMN++ GGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKG+RPAI
Sbjct: 306  LERAAKMNDAFGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAI 365

Query: 1180 NVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRLT 1359
            NVGLSVSRVGSAAQT+AMKQVAG+MKLELAQYREVAAFAQFGSDLDA+TQQLL+RGVRLT
Sbjct: 366  NVGLSVSRVGSAAQTRAMKQVAGTMKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLT 425

Query: 1360 ELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQALLKTIRE 1539
            ELLKQGQY PM IEEQV VIYAGV+GYLDK++PS ITKFE  FL+H+ S  QALL  IR
Sbjct: 426  ELLKQGQYSPMAIEEQVAVIYAGVRGYLDKLEPSKITKFENAFLSHVISQHQALLGKIRT 485

Query: 1540 EGQISPQTDAQLKDVVVNFLATFK 1611
            +G+IS ++DA+LK++V NFLA F+
Sbjct: 486  DGKISEESDAKLKEIVTNFLAGFE 509


>gi|1943080|pdb|1BMF|A Chain A, Bovine Mitochondrial F1-Atpase
 gi|1943081|pdb|1BMF|B Chain B, Bovine Mitochondrial F1-Atpase
 gi|1943082|pdb|1BMF|C Chain C, Bovine Mitochondrial F1-Atpase
 gi|3660248|pdb|1NBM|A Chain A, The Structure Of Bovine F1-Atpase
            Covalently Inhibited With 4-Chloro-7-Nitrobenzofurazan
 gi|3660249|pdb|1NBM|B Chain B, The Structure Of Bovine F1-Atpase
            Covalently Inhibited With 4-Chloro-7-Nitrobenzofurazan
 gi|3660250|pdb|1NBM|C Chain C, The Structure Of Bovine F1-Atpase
            Covalently Inhibited With 4-Chloro-7-Nitrobenzofurazan
 gi|6573680|pdb|1QO1|A Chain A, Molecular Architecture Of The Rotary
            Motor In Atp Synthase From Yeast Mitochondria
 gi|6573681|pdb|1QO1|B Chain B, Molecular Architecture Of The Rotary
            Motor In Atp Synthase From Yeast Mitochondria
 gi|6573682|pdb|1QO1|C Chain C, Molecular Architecture Of The Rotary
            Motor In Atp Synthase From Yeast Mitochondria
 gi|9256938|pdb|1E1Q|A Chain A, Bovine Mitochondrial F1-Atpase At 100k
 gi|9256939|pdb|1E1Q|B Chain B, Bovine Mitochondrial F1-Atpase At 100k
 gi|9256940|pdb|1E1Q|C Chain C, Bovine Mitochondrial F1-Atpase At 100k
 gi|9256945|pdb|1E1R|A Chain A, Bovine Mitochondrial F1-Atpase
            Inhibited By Mg2+adp And Aluminium Fluoride
 gi|9256946|pdb|1E1R|B Chain B, Bovine Mitochondrial F1-Atpase
            Inhibited By Mg2+adp And Aluminium Fluoride
 gi|9256947|pdb|1E1R|C Chain C, Bovine Mitochondrial F1-Atpase
            Inhibited By Mg2+adp And Aluminium Fluoride
 gi|11514056|pdb|1E79|A Chain A, Bovine F1-Atpase Inhibited By Dccd
            (Dicyclohexylcarbodiimide)
 gi|11514057|pdb|1E79|B Chain B, Bovine F1-Atpase Inhibited By Dccd
            (Dicyclohexylcarbodiimide)
 gi|11514058|pdb|1E79|C Chain C, Bovine F1-Atpase Inhibited By Dccd
            (Dicyclohexylcarbodiimide)
 gi|14278504|pdb|1H8H|A Chain A, Bovine Mitochondrial F1-Atpase
            Crystallised In The Presence Of 5mm Amppnp
 gi|14278505|pdb|1H8H|B Chain B, Bovine Mitochondrial F1-Atpase
            Crystallised In The Presence Of 5mm Amppnp
 gi|14278506|pdb|1H8H|C Chain C, Bovine Mitochondrial F1-Atpase
            Crystallised In The Presence Of 5mm Amppnp
 gi|15825702|pdb|1H8E|A Chain A, (Adp.Alf4)2(Adp.So4) Bovine F1-Atpase
            (All Three Catalytic Sites Occupied)
 gi|15825703|pdb|1H8E|B Chain B, (Adp.Alf4)2(Adp.So4) Bovine F1-Atpase
            (All Three Catalytic Sites Occupied)
 gi|15825704|pdb|1H8E|C Chain C, (Adp.Alf4)2(Adp.So4) Bovine F1-Atpase
            (All Three Catalytic Sites Occupied)
 gi|33357741|pdb|1OHH|A Chain A, Bovine Mitochondrial F1-Atpase
            Complexed With The Inhibitor Protein If1
 gi|33357742|pdb|1OHH|B Chain B, Bovine Mitochondrial F1-Atpase
            Complexed With The Inhibitor Protein If1
 gi|33357743|pdb|1OHH|C Chain C, Bovine Mitochondrial F1-Atpase
            Complexed With The Inhibitor Protein If1
          Length = 510

 Score =  806 bits (2081), Expect = 0.0
 Identities = 411/504 (81%), Positives = 457/504 (90%)
 Frame = +1

Query: 100  SEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMN 279
            +EVS ILEERILG +T ++LEETG+VLSIGDGIARV+GL+N+QAEEMVEF SG+KGM++N
Sbjct: 6    AEVSSILEERILGADTSVDLEETGRVLSIGDGIARVHGLRNVQAEEMVEFSSGLKGMSLN 65

Query: 280  LXXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANAR 459
            L               I+EGDIVKRTGAIVDVPVG+ LLGRVVDALGN IDGKGPI +
Sbjct: 66   LEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIGSKA 125

Query: 460  RSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIIN 639
            R RV +KAPGIIPR+SVREPM TG+KAVDSLVPIGRGQRELIIGDRQTGKT+IAIDTIIN
Sbjct: 126  RRRVGLKAPGIIPRISVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIIN 185

Query: 640  QKRFNDAGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQFL 819
            QKRFND  D+KKKL+CIYVA+GQKRSTVAQ+VKRLTDA AM YTIVVSATASDAAPLQ+L
Sbjct: 186  QKRFNDGTDEKKKLYCIYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYL 245

Query: 820  APYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL 999
            APYSGC+MGE+FRDNGKHALII+DDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL
Sbjct: 246  APYSGCSMGEYFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL 305

Query: 1000 LERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPAI 1179
            LERAAKMN++ GGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKG+RPAI
Sbjct: 306  LERAAKMNDAFGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAI 365

Query: 1180 NVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRLT 1359
            NVGLSVSRVGSAAQT+AMKQVAG+MKLELAQYREVAAFAQFGSDLDA+TQQLL+RGVRLT
Sbjct: 366  NVGLSVSRVGSAAQTRAMKQVAGTMKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLT 425

Query: 1360 ELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQALLKTIRE 1539
            ELLKQGQY PM IEEQV VIYAGV+GYLDK++PS ITKFE  FL+H+ S  QALL  IR
Sbjct: 426  ELLKQGQYSPMAIEEQVAVIYAGVRGYLDKLEPSKITKFENAFLSHVISQHQALLGKIRT 485

Query: 1540 EGQISPQTDAQLKDVVVNFLATFK 1611
            +G+IS ++DA+LK++V NFLA F+
Sbjct: 486  DGKISEESDAKLKEIVTNFLAGFE 509


>gi|24658560|ref|NP_726243.1| CG3612-PA [Drosophila melanogaster]
 gi|5921205|sp|P35381|ATPA_DROME ATP synthase alpha chain,
            mitochondrial precursor (Protein bellwether)
 gi|1556392|emb|CAA69202.1| mitochondrial ATP synthase alpha subunit
            precursor [Drosophila melanogaster]
 gi|7291477|gb|AAF46903.1| CG3612-PA [Drosophila melanogaster]
 gi|28317168|gb|AAO39595.1| HL08087p [Drosophila melanogaster]
          Length = 552

 Score =  801 bits (2069), Expect = 0.0
 Identities = 415/532 (78%), Positives = 463/532 (87%), Gaps = 3/532 (0%)
 Frame = +1

Query: 25   ALNTAVKVQNAGIATTARGMAGAS---GSEVSKILEERILGTETGINLEETGKVLSIGDG 195
            A   A K      +  AR +  AS    +E+S ILEERILG     +LEETG+VLSIGDG
Sbjct: 20   ANQVACKAAYPAASLAARKLHVASTQRSAEISNILEERILGVAPKADLEETGRVLSIGDG 79

Query: 196  IARVYGLKNIQAEEMVEFDSGIKGMAMNLXXXXXXXXXXXXXXXIREGDIVKRTGAIVDV 375
            IARVYGL NIQA+EMVEF SG+KGMA+NL               I++GDIVKRTGAIVDV
Sbjct: 80   IARVYGLNNIQADEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKQGDIVKRTGAIVDV 139

Query: 376  PVGDGLLGRVVDALGNPIDGKGPIANARRSRVEVKAPGIIPRLSVREPMVTGVKAVDSLV 555
            PVGD LLGRVVDALGN IDGKG I    R RV +KAPGIIPR+SVREPM TG+KAVDSLV
Sbjct: 140  PVGDELLGRVVDALGNAIDGKGAINTKDRFRVGIKAPGIIPRVSVREPMQTGIKAVDSLV 199

Query: 556  PIGRGQRELIIGDRQTGKTAIAIDTIINQKRFNDAGDDKKKLFCIYVAVGQKRSTVAQIV 735
            PIGRGQRELIIGDRQTGKTA+AIDTIINQKRFN+A D+ KKL+CIYVA+GQKRSTVAQIV
Sbjct: 200  PIGRGQRELIIGDRQTGKTALAIDTIINQKRFNEAQDESKKLYCIYVAIGQKRSTVAQIV 259

Query: 736  KRLTDAGAMDYTIVVSATASDAAPLQFLAPYSGCAMGEHFRDNGKHALIIFDDLSKQAVA 915
            KRLTD+GAM Y+++VSATASDAAPLQ+LAPYSGCAMGE+FRD GKHALII+DDLSKQAVA
Sbjct: 260  KRLTDSGAMGYSVIVSATASDAAPLQYLAPYSGCAMGEYFRDKGKHALIIYDDLSKQAVA 319

Query: 916  YRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNNSLGGGSLTALPVIETQAGDVSAY 1095
            YRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKM+ ++GGGSLTALPVIETQAGDVSAY
Sbjct: 320  YRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSPAMGGGSLTALPVIETQAGDVSAY 379

Query: 1096 IPTNVISITDGQIFLETELFYKGVRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQY 1275
            IPTNVISITDGQIFLETELFYKG+RPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQY
Sbjct: 380  IPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQY 439

Query: 1276 REVAAFAQFGSDLDASTQQLLNRGVRLTELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVD 1455
            REVAAFAQFGSDLDA+TQQLLNRGVRLTELLKQGQYVPM IE+QV VIY GV+G+LDK+D
Sbjct: 440  REVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEDQVAVIYCGVRGHLDKMD 499

Query: 1456 PSAITKFEKEFLAHLRSSQQALLKTIREEGQISPQTDAQLKDVVVNFLATFK 1611
            P+ ITKFEKEFL H+++S+QALL TI ++G IS  +DA+LKD+V  F++TF+
Sbjct: 500  PAKITKFEKEFLQHIKTSEQALLDTIAKDGAISEASDAKLKDIVAKFMSTFQ 551


>gi|47207317|emb|CAF96443.1| unnamed protein product [Tetraodon
            nigroviridis]
          Length = 551

 Score =  800 bits (2065), Expect = 0.0
 Identities = 406/504 (80%), Positives = 455/504 (89%)
 Frame = +1

Query: 100  SEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMN 279
            +EVS ILEE+I+G +T  +LEETG+VLSIGDGIARVYGL+N+QAEEMVEF SG+KGM++N
Sbjct: 48   AEVSSILEEKIMGADTSADLEETGRVLSIGDGIARVYGLRNVQAEEMVEFSSGLKGMSLN 107

Query: 280  LXXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANAR 459
            L               I+EGDIVKRTGAIVDVPVG+ LLGRVVDALGN IDGKGP+ +
Sbjct: 108  LEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPLGSKT 167

Query: 460  RSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIIN 639
            R RV +KAPGIIPR+SVREPM TG+KAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIIN
Sbjct: 168  RRRVGLKAPGIIPRISVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIIN 227

Query: 640  QKRFNDAGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQFL 819
            QKRFN+  D+KKKL+CIYVA+GQKRSTVAQ+VKRLTDA AM YTIVVSATASDAAPLQ+L
Sbjct: 228  QKRFNEGTDEKKKLYCIYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYL 287

Query: 820  APYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL 999
            APYSGC+MGE+FRDNGKHALII+DDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL
Sbjct: 288  APYSGCSMGEYFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL 347

Query: 1000 LERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPAI 1179
            LERAAKMN++ GGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKG+RPAI
Sbjct: 348  LERAAKMNDNFGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAI 407

Query: 1180 NVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRLT 1359
            NVGLSVSRVGSAAQT+AMKQVAG+MKLELAQYREVAAFAQFGSDLDA+TQQLLNRGVRLT
Sbjct: 408  NVGLSVSRVGSAAQTRAMKQVAGTMKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLT 467

Query: 1360 ELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQALLKTIRE 1539
            ELLKQGQY PM IEEQV VIYAGV+G+LDK++PS IT+FEK FL H+ S  Q LL  I+
Sbjct: 468  ELLKQGQYSPMAIEEQVAVIYAGVRGHLDKMEPSKITRFEKAFLQHILSQHQDLLAAIKA 527

Query: 1540 EGQISPQTDAQLKDVVVNFLATFK 1611
            +G+IS  +DA+LK +V+NFL++F+
Sbjct: 528  DGKISEASDAKLKQIVLNFLSSFE 551


>gi|14009437|dbj|BAB47389.1| mitochondrial ATP synthase alpha-subunit
            [Cyprinus carpio]
          Length = 552

 Score =  794 bits (2051), Expect = 0.0
 Identities = 411/515 (79%), Positives = 456/515 (87%), Gaps = 1/515 (0%)
 Frame = +1

Query: 70   TARGMAGASGS-EVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVE 246
            TAR     +G+ EVS ILEE+ILG +T   LEETG+VLSIGDGIARVYGL+N+QAEEMVE
Sbjct: 38   TARPWLQKTGTAEVSSILEEKILGADTSAALEETGRVLSIGDGIARVYGLRNVQAEEMVE 97

Query: 247  FDSGIKGMAMNLXXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNP 426
            F SG+KGM++ L               I+EGDIVKRTGAIVDVPVG+ LLGRVVDALGN
Sbjct: 98   FSSGLKGMSLKLEPENVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNA 157

Query: 427  IDGKGPIANARRSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTG 606
            IDGKGP+ + +R RV +KAPGIIPR+SVREPM TG+KAVDSLVPIGRGQRELIIGDRQTG
Sbjct: 158  IDGKGPLGSKQRRRVGLKAPGIIPRISVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTG 217

Query: 607  KTAIAIDTIINQKRFNDAGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSA 786
            KTAIAIDTIINQKRFND  ++KKKL+CIYVA+GQKRSTVAQ+VKRLTDA AM YTIVVSA
Sbjct: 218  KTAIAIDTIINQKRFNDGTEEKKKLYCIYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSA 277

Query: 787  TASDAAPLQFLAPYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAY 966
            TASDAAPLQ+LAPYSGC+MG +FRDNGKHALII+DDLSKQAVAYRQMSLLLRRPPGREAY
Sbjct: 278  TASDAAPLQYLAPYSGCSMGGYFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAY 337

Query: 967  PGDVFYLHSRLLERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLET 1146
            PGDVFYLHSRLLERAAKMN++ GGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLET
Sbjct: 338  PGDVFYLHSRLLERAAKMNDNFGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLET 397

Query: 1147 ELFYKGVRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDAST 1326
            ELFYKG+RPAINVGLSVSRVGSAAQT+ MKQVAG+MKLELAQYREVAAFAQFGSDLDA+T
Sbjct: 398  ELFYKGIRPAINVGLSVSRVGSAAQTRGMKQVAGTMKLELAQYREVAAFAQFGSDLDAAT 457

Query: 1327 QQLLNRGVRLTELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRS 1506
            QQLLNRGVRLTELLKQGQY PM IEEQV VI AGV+G+LDK+DPS ITKFEK FL H+ S
Sbjct: 458  QQLLNRGVRLTELLKQGQYSPMAIEEQVAVINAGVRGHLDKMDPSKITKFEKAFLQHVIS 517

Query: 1507 SQQALLKTIREEGQISPQTDAQLKDVVVNFLATFK 1611
             Q  L   IR +G+IS  +DA+LK+VV+NFLA+F+
Sbjct: 518  QQTDLFAAIRTDGKISEASDAKLKEVVLNFLASFE 552


>gi|114535|sp|P08428|ATPA_XENLA ATP synthase alpha chain,
            mitochondrial precursor
 gi|85776|pir||A29865 H+-transporting two-sector ATPase (EC 3.6.3.14)
            alpha chain - African clawed frog
 gi|213948|gb|AAA49646.1| mitochondrial ATPase, alpha subunit
          Length = 545

 Score =  793 bits (2049), Expect = 0.0
 Identities = 420/553 (75%), Positives = 466/553 (83%), Gaps = 16/553 (2%)
 Frame = +1

Query: 1    MLSKRIVTALNTAVKVQNAGIATTARGMA-------GASG---------SEVSKILEERI 132
            MLS R+  AL  A+  Q+  ++  A G A        ASG         +EVS ILEERI
Sbjct: 1    MLSVRVAAALARALPRQSGLVSKKALGAAFVATRNIHASGVWPPEKSGTAEVSSILEERI 60

Query: 133  LGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMNLXXXXXXXXXX 312
            LG +T  +LEETG+VLSIGDGIARVYGL+N+QAEEMVEF SG+KGM++NL
Sbjct: 61   LGADTTADLEETGRVLSIGDGIARVYGLRNVQAEEMVEFSSGLKGMSLNLEPDNVGVVGL 120

Query: 313  XXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANARRSRVEVKAPGI 492
                 I+EGDIVKRTGAIVDVPVGD LLGRVVDALGN IDGKGPI +  R RV +KAPGI
Sbjct: 121  ANDKLIKEGDIVKRTGAIVDVPVGDELLGRVVDALGNTIDGKGPIGSKTRRRVGLKAPGI 180

Query: 493  IPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIINQKRFNDAGDDK 672
            IPR+SVREPM TG+KAVDSLVPIGRGQRELIIGDRQTGKT+IAIDTIINQKRFND  D+K
Sbjct: 181  IPRISVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGTDEK 240

Query: 673  KKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQFLAPYSGCAMGEH 852
            KKL+CIYVA+GQKR         LTDA AM YTIVVS TASDAAPLQ+LAPYSGC+MGE+
Sbjct: 241  KKLYCIYVAIGQKR---------LTDADAMKYTIVVSRTASDAAPLQYLAPYSGCSMGEY 291

Query: 853  FRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNNSL 1032
            FRDNG HALII+DDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMN+
Sbjct: 292  FRDNGTHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDHF 351

Query: 1033 GGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPAINVGLSVSRVGS 1212
            GGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKG+RPAINVGLSVSRVGS
Sbjct: 352  GGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGS 411

Query: 1213 AAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRLTELLKQGQYVPM 1392
            AAQT+AMKQVAG+MKLELAQYREVAAFAQFGSDLDA+TQQLLNRGVRLTELLKQGQYVPM
Sbjct: 412  AAQTRAMKQVAGTMKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPM 471

Query: 1393 GIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQALLKTIREEGQISPQTDAQ 1572
             IEEQV VIYAGV+G+LDK++PS ITKFE  FLAH++S  Q LL TIR +G+IS Q DA+
Sbjct: 472  AIEEQVTVIYAGVRGHLDKMEPSKITKFESAFLAHVKSQHQELLATIRADGKISEQADAK 531

Query: 1573 LKDVVVNFLATFK 1611
            LK++V+NFL+TF+
Sbjct: 532  LKEIVLNFLSTFE 544


>gi|47551121|ref|NP_999743.1| mitochondrial ATP synthase alpha subunit
            precursor [Strongylocentrotus purpuratus]
 gi|1556441|emb|CAA69203.1| mitochondrial ATP synthase alpha subunit
            precursor [Strongylocentrotus purpuratus]
          Length = 551

 Score =  790 bits (2039), Expect = 0.0
 Identities = 409/525 (77%), Positives = 454/525 (85%)
 Frame = +1

Query: 37   AVKVQNAGIATTARGMAGASGSEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGL 216
            A  V +  + T+A      S +EVS ILEERILG     NLEETG+VLSIGDGIARVYGL
Sbjct: 30   AAYVSHRNVTTSA---PRPSTAEVSSILEERILGHTPKENLEETGRVLSIGDGIARVYGL 86

Query: 217  KNIQAEEMVEFDSGIKGMAMNLXXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLL 396
            KNIQAEEMVEF SG+KGMA+NL               I+EGD+VKR+GAIVDVPVG+ +L
Sbjct: 87   KNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDVVKRSGAIVDVPVGESIL 146

Query: 397  GRVVDALGNPIDGKGPIANARRSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQR 576
            GRVVDALG PIDGKGP+    R+RV  KAPGI PR+SVREPM TG+KAVDSLV I RGQR
Sbjct: 147  GRVVDALGTPIDGKGPLGTEHRARVGTKAPGI-PRISVREPMQTGIKAVDSLVLICRGQR 205

Query: 577  ELIIGDRQTGKTAIAIDTIINQKRFNDAGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAG 756
            ELIIGDRQTGKTA+AIDTIINQKRFND  ++K KL+CIYVA+GQKRSTVAQIVKRL D+
Sbjct: 206  ELIIGDRQTGKTAVAIDTIINQKRFNDEAEEKNKLYCIYVAIGQKRSTVAQIVKRLHDSD 265

Query: 757  AMDYTIVVSATASDAAPLQFLAPYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLL 936
            A+ YTI+VSATASDAAPLQ+LAPYSGCAMGE FRDNGKHALII+DDLSKQAVAYRQMSLL
Sbjct: 266  ALKYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLL 325

Query: 937  LRRPPGREAYPGDVFYLHSRLLERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVIS 1116
            LRRPPGREAYPGDVFYLHSRLLERAAKMN   GGGSLTALPVIETQAGDVSAYIPTNVIS
Sbjct: 326  LRRPPGREAYPGDVFYLHSRLLERAAKMNPDFGGGSLTALPVIETQAGDVSAYIPTNVIS 385

Query: 1117 ITDGQIFLETELFYKGVRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFA 1296
            ITDGQIFLETELFYKG+ PAINVGLSVSRVGSAAQ KAMKQVAGSMKL+L +YREVAAFA
Sbjct: 386  ITDGQIFLETELFYKGIPPAINVGLSVSRVGSAAQVKAMKQVAGSMKLDLGEYREVAAFA 445

Query: 1297 QFGSDLDASTQQLLNRGVRLTELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKF 1476
            QFGSDLDASTQ LLNRGVRLTELLKQGQY PM +E+QV V++AGV+G+LDK+DP+ +TKF
Sbjct: 446  QFGSDLDASTQNLLNRGVRLTELLKQGQYTPMAVEDQVAVLFAGVRGHLDKIDPAKVTKF 505

Query: 1477 EKEFLAHLRSSQQALLKTIREEGQISPQTDAQLKDVVVNFLATFK 1611
            E++FLAH+RSS QALL TIR EGQ+SPQT+A LKDVV+ FL TF+
Sbjct: 506  EEQFLAHIRSSHQALLDTIRTEGQLSPQTEATLKDVVLKFLDTFE 550


>gi|18143645|dbj|BAB79706.1| ATP synthase alpha-subunit [Ciona
            intestinalis]
          Length = 554

 Score =  733 bits (1893), Expect = 0.0
 Identities = 378/552 (68%), Positives = 450/552 (81%), Gaps = 16/552 (2%)
 Frame = +1

Query: 1    MLSKRIVTALN--------TAVKVQNAGIATTARGMAGA--------SGSEVSKILEERI 132
            M+S +++ AL          A     A     AR ++ +          +E+S ILE+RI
Sbjct: 1    MISSKVIAALGRTLPQAAKNATNTLKAASFVAARNLSSSRPNHAEKQGAAELSSILEQRI 60

Query: 133  LGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMNLXXXXXXXXXX 312
            LGT    +L ETG+VL+IGDGIARV+GL+NIQAEEMVEF+SG+KGMA+NL
Sbjct: 61   LGTAPSEDLTETGRVLTIGDGIARVHGLRNIQAEEMVEFESGLKGMALNLEKDNVGIVVF 120

Query: 313  XXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANARRSRVEVKAPGI 492
                 I+EGD VKRTGAIVDVPVG+ +LGRVVDALGNP+DGKGP+    R RV++KAPGI
Sbjct: 121  GNDRNIKEGDTVKRTGAIVDVPVGEEILGRVVDALGNPLDGKGPLNTKLRRRVDIKAPGI 180

Query: 493  IPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIINQKRFNDAGDDK 672
            I R+SV EPM TG+KA+DSLVPIGRGQRELIIGDRQTGKTA+AIDTIINQKRFN   D+K
Sbjct: 181  IARVSVSEPMQTGLKAIDSLVPIGRGQRELIIGDRQTGKTAVAIDTIINQKRFNVGTDEK 240

Query: 673  KKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQFLAPYSGCAMGEH 852
            KKL+CIYVAVGQK+ST+ Q+++RL    +M Y+IVV A+A+ AAPLQ+LAPYS  +MGE+
Sbjct: 241  KKLYCIYVAVGQKQSTITQLIQRLESTDSMKYSIVVVASAAYAAPLQYLAPYSATSMGEY 300

Query: 853  FRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNNSL 1032
            FRDNGKHALII+DDLSKQAVAYRQMSLLLRRPPGREA+PGDVFYLHSRLLERAAKM+++
Sbjct: 301  FRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKMSDAF 360

Query: 1033 GGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPAINVGLSVSRVGS 1212
            GGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELF+KG+RPAINVGLSVSRVGS
Sbjct: 361  GGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFHKGIRPAINVGLSVSRVGS 420

Query: 1213 AAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRLTELLKQGQYVPM 1392
            AAQ K MKQV+G+MKL+LAQYREVAAFAQFGSD+DA+TQQLLNRGVRLTELLKQ QY PM
Sbjct: 421  AAQIKGMKQVSGTMKLDLAQYREVAAFAQFGSDMDAATQQLLNRGVRLTELLKQIQYSPM 480

Query: 1393 GIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQALLKTIREEGQISPQTDAQ 1572
             I EQ+  ++ GV+GYLDKVDP+ +T FE  FLAH++SS   +L +IR EG+I+  T+A+
Sbjct: 481  DIAEQIVSVFCGVRGYLDKVDPTKVTDFETAFLAHMKSSHAKILDSIRNEGKITESTEAE 540

Query: 1573 LKDVVVNFLATF 1608
            LK+VV  F+ +F
Sbjct: 541  LKEVVAAFVKSF 552


>gi|34782901|gb|AAH08028.2| ATP5A1 protein [Homo sapiens]
          Length = 450

 Score =  726 bits (1873), Expect = 0.0
 Identities = 371/449 (82%), Positives = 407/449 (90%)
 Frame = +1

Query: 265  GMAMNLXXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGP 444
            GM++NL               I+EGDIVKRTGAIVDVPVG+ LLGRVVDALGN IDGKGP
Sbjct: 1    GMSLNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGP 60

Query: 445  IANARRSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 624
            I +  R RV +KAPGIIPR+SVREPM TG+KAVDSLVPIGRGQRELIIGDRQTGKT+IAI
Sbjct: 61   IGSKTRRRVGLKAPGIIPRISVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAI 120

Query: 625  DTIINQKRFNDAGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAA 804
            DTIINQKRFND  D+KKKL+CIYVA+GQKRSTVAQ+VKRLTDA AM YTIVVSATASDAA
Sbjct: 121  DTIINQKRFNDGSDEKKKLYCIYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAA 180

Query: 805  PLQFLAPYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFY 984
            PLQ+LAPYSGC+MGE+FRDNGKHALII+DDLSKQAVAYRQMSLLLRRPPGREAYPGDVFY
Sbjct: 181  PLQYLAPYSGCSMGEYFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFY 240

Query: 985  LHSRLLERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKG 1164
            LHSRLLERAAKMN++ GGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKG
Sbjct: 241  LHSRLLERAAKMNDAFGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKG 300

Query: 1165 VRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNR 1344
            +RPAINVGLSVSRVGSAAQT+AMKQVAG+MKLELAQYREVAAFAQFGSDLDA+TQQLL+R
Sbjct: 301  IRPAINVGLSVSRVGSAAQTRAMKQVAGTMKLELAQYREVAAFAQFGSDLDAATQQLLSR 360

Query: 1345 GVRLTELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQALL 1524
            GVRLTELLKQGQY PM IEEQV VIYAGV+GYLDK++PS ITKFE  FL+H+ S  QALL
Sbjct: 361  GVRLTELLKQGQYSPMAIEEQVAVIYAGVRGYLDKLEPSKITKFENAFLSHVVSQHQALL 420

Query: 1525 KTIREEGQISPQTDAQLKDVVVNFLATFK 1611
             TIR +G+IS Q+DA+LK++V NFLA F+
Sbjct: 421  GTIRADGKISEQSDAKLKEIVTNFLAGFE 449


>gi|23015477|ref|ZP_00055252.1| COG0056: F0F1-type ATP synthase, alpha
            subunit [Magnetospirillum magnetotacticum]
          Length = 509

 Score =  715 bits (1846), Expect = 0.0
 Identities = 369/503 (73%), Positives = 418/503 (82%)
 Frame = +1

Query: 100  SEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMN 279
            +E+S IL+++I    T   + E G+VLS+GDGIARV+GL  +QA EMVEF  GIKGMA+N
Sbjct: 6    AEISAILKQQIATFGTEAEVAEVGQVLSVGDGIARVHGLDKVQAGEMVEFPGGIKGMALN 65

Query: 280  LXXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANAR 459
            L               I+EGD+VKRTG+IVDVPVG GLLGRVVDALGNPIDGKGPI  A
Sbjct: 66   LETDNVGVVIFGDDRNIKEGDVVKRTGSIVDVPVGKGLLGRVVDALGNPIDGKGPIEAAS 125

Query: 460  RSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIIN 639
            R RV+VKAPGIIPR SV EPM TG+KAVD+L+PIGRGQREL+IGDRQTGKTAI +DTIIN
Sbjct: 126  RQRVDVKAPGIIPRKSVHEPMSTGIKAVDALIPIGRGQRELVIGDRQTGKTAILVDTIIN 185

Query: 640  QKRFNDAGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQFL 819
            QKR++DA D+K KLFCIYVAVGQKRSTVAQIVK LTD GAMDYTIVV+ATAS+ APLQF+
Sbjct: 186  QKRWHDANDEKAKLFCIYVAVGQKRSTVAQIVKTLTDYGAMDYTIVVAATASEPAPLQFI 245

Query: 820  APYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL 999
            APY+GC MGE+FRDNG HALII+DDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL
Sbjct: 246  APYAGCTMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL 305

Query: 1000 LERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPAI 1179
            LERAAKM ++ G GSLTALPVIETQA DVSAYIPTNVISITDGQIFLETELFYKG+RPA+
Sbjct: 306  LERAAKMGDAAGAGSLTALPVIETQANDVSAYIPTNVISITDGQIFLETELFYKGIRPAV 365

Query: 1180 NVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRLT 1359
            NVGLSVSRVGSAAQ KAMKQVAGS+KLELAQYRE+AAFAQF SDLD +TQ+LL RG RLT
Sbjct: 366  NVGLSVSRVGSAAQIKAMKQVAGSIKLELAQYREMAAFAQFASDLDPATQKLLARGARLT 425

Query: 1360 ELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQALLKTIRE 1539
            ELLKQ Q+ PM  EE+V  IYAGVKGYLDK+D   + +FE   L+ ++S    +L TI
Sbjct: 426  ELLKQPQFSPMATEEEVISIYAGVKGYLDKIDVRQVGRFESSLLSEIKSKAPEILSTIAT 485

Query: 1540 EGQISPQTDAQLKDVVVNFLATF 1608
            E QIS QT+ +LK  +  F  TF
Sbjct: 486  EKQISAQTEEKLKAFLDAFSKTF 508


>gi|2447011|dbj|BAA22508.1| F1F0-ATPase alpha subunit precursor
            [Saccharomyces cerevisiae]
          Length = 545

 Score =  709 bits (1829), Expect = 0.0
 Identities = 365/535 (68%), Positives = 432/535 (80%)
 Frame = +1

Query: 4    LSKRIVTALNTAVKVQNAGIATTARGMAGASGSEVSKILEERILGTETGINLEETGKVLS 183
            LS+ ++ +   A     A  +T       A  +EVS ILEERI G     NL ETG+VL+
Sbjct: 11   LSRTLINSTKAARPAAAALASTRRLASTKAQPTEVSSILEERIKGVSDEANLNETGRVLA 70

Query: 184  IGDGIARVYGLKNIQAEEMVEFDSGIKGMAMNLXXXXXXXXXXXXXXXIREGDIVKRTGA 363
            +GDGIARV+GL NIQAEE+VEF SG+KGMA+NL               ++EG++VKRTG
Sbjct: 71   VGDGIARVFGLNNIQAEELVEFSSGVKGMALNLEPGQVGIVLFGSDRLVKEGELVKRTGN 130

Query: 364  IVDVPVGDGLLGRVVDALGNPIDGKGPIANARRSRVEVKAPGIIPRLSVREPMVTGVKAV 543
            IVDVPVG GLLGRVVDALGNPIDGKGPI  A RSR +VKAPGI+PR SV EP+ TG+KAV
Sbjct: 131  IVDVPVGPGLLGRVVDALGNPIDGKGPIDAAGRSRAQVKAPGILPRRSVHEPVQTGLKAV 190

Query: 544  DSLVPIGRGQRELIIGDRQTGKTAIAIDTIINQKRFNDAGDDKKKLFCIYVAVGQKRSTV 723
            D+LVPIGRGQRELIIGDRQTGKTA+A+DTI+NQKR+N+  D+ KKL+C+YVAVGQKRSTV
Sbjct: 191  DALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNNGSDESKKLYCVYVAVGQKRSTV 250

Query: 724  AQIVKRLTDAGAMDYTIVVSATASDAAPLQFLAPYSGCAMGEHFRDNGKHALIIFDDLSK 903
            AQ+V+ L    AM Y+I+V+ATAS+AAPLQ+LAP++  ++GE FRDNGKHALI++DDLSK
Sbjct: 251  AQLVQTLEQHDAMKYSIIVAATASEAAPLQYLAPFTAASIGEWFRDNGKHALIVYDDLSK 310

Query: 904  QAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNNSLGGGSLTALPVIETQAGD 1083
            QAVAYRQ+SLLLRRPPGREAYPGDVFYLHSRLLERAAK++   G GSLTALPVIETQ GD
Sbjct: 311  QAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSEKEGSGSLTALPVIETQGGD 370

Query: 1084 VSAYIPTNVISITDGQIFLETELFYKGVRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLE 1263
            VSAYIPTNVISITDGQIFLE ELFYKG+RPAINVGLSVSRVGSAAQ KA+KQVAGS+KL
Sbjct: 371  VSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVKALKQVAGSLKLF 430

Query: 1264 LAQYREVAAFAQFGSDLDASTQQLLNRGVRLTELLKQGQYVPMGIEEQVGVIYAGVKGYL 1443
            LAQYREVAAFAQFGSDLDAST+Q L RG RLT+LLKQ QY P+  EEQV +IYAGV G+L
Sbjct: 431  LAQYREVAAFAQFGSDLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLIYAGVNGHL 490

Query: 1444 DKVDPSAITKFEKEFLAHLRSSQQALLKTIREEGQISPQTDAQLKDVVVNFLATF 1608
            D ++ S I +FE  FL++L+S+   LL  IRE+G++S +  A LK    +F+ATF
Sbjct: 491  DGIELSRIGEFESSFLSYLKSNHNELLTEIREKGELSKELLASLKSATESFVATF 545


>gi|45200825|ref|NP_986395.1| AGL272Cp [Eremothecium gossypii]
 gi|44985523|gb|AAS54219.1| AGL272Cp [Eremothecium gossypii]
          Length = 547

 Score =  708 bits (1827), Expect = 0.0
 Identities = 367/547 (67%), Positives = 439/547 (80%), Gaps = 11/547 (2%)
 Frame = +1

Query: 1    MLSKRIVTALNTAVKVQN----AGIATTARGMAG-------ASGSEVSKILEERILGTET 147
            MLS+ ++ +  +   VQ     A +A  A  +AG       A  +EVS ILEERI G
Sbjct: 1    MLSRTVIRSARSLAAVQLGRTVARVARPAVMIAGRRFASAKAQPTEVSSILEERIRGVSE 60

Query: 148  GINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMNLXXXXXXXXXXXXXXX 327
              NL ETG+VLS+GDGIARV+GL N+QAEE+VEF SG+KGMA+NL
Sbjct: 61   EANLNETGRVLSVGDGIARVFGLNNVQAEELVEFSSGVKGMALNLEPGQVGIVLFGSDRL 120

Query: 328  IREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANARRSRVEVKAPGIIPRLS 507
            ++EG++VKRTG IVDVPVG  +LGRVVDALGNPIDGKG I  +  SR +VKAPGI+PR S
Sbjct: 121  VKEGEVVKRTGKIVDVPVGPEMLGRVVDALGNPIDGKGAIKASGTSRAQVKAPGILPRRS 180

Query: 508  VREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIINQKRFNDAGDDKKKLFC 687
            V EP+ TG+KAVD+LVPIGRGQRELIIGDRQTGKTA+A+DTI+NQKR+N + D+ KKL+C
Sbjct: 181  VHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNSSNDESKKLYC 240

Query: 688  IYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQFLAPYSGCAMGEHFRDNG 867
            +YVAVGQKRSTVAQ+V+ L    AM Y+++V+ATAS+AAPLQ++AP++  A+GE FRDNG
Sbjct: 241  VYVAVGQKRSTVAQLVQTLEQHDAMKYSVIVAATASEAAPLQYIAPFTAAAIGEWFRDNG 300

Query: 868  KHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNNSLGGGSL 1047
            KHALI++DDLSKQAVAYRQ+SLLLRRPPGREAYPGDVFYLHSRLLERAAKM+   GGGSL
Sbjct: 301  KHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSEKNGGGSL 360

Query: 1048 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPAINVGLSVSRVGSAAQTK 1227
            TALPVIETQ GDVSAYIPTNVISITDGQIFLE ELFYKG+RPAINVGLSVSRVGSAAQ K
Sbjct: 361  TALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVK 420

Query: 1228 AMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRLTELLKQGQYVPMGIEEQ 1407
            A+KQVAGS+KL LAQYREVAAFAQFGSDLDAST+Q L RG RLT+LL Q QY P+  EEQ
Sbjct: 421  ALKQVAGSLKLFLAQYREVAAFAQFGSDLDASTKQTLARGERLTQLLTQSQYSPLAAEEQ 480

Query: 1408 VGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQALLKTIREEGQISPQTDAQLKDVV 1587
            V +IYAGV GYLD ++ S I +FEKEFLA+L++S + ++  IRE+G++S    A+LK
Sbjct: 481  VPLIYAGVNGYLDNIELSRIGEFEKEFLAYLKASHEEIVSAIREKGELSKDLLAKLKSAT 540

Query: 1588 VNFLATF 1608
             +F+ATF
Sbjct: 541  ESFVATF 547


>gi|6319370|ref|NP_009453.1| Alpha subunit of the F1 sector of
            mitochondrial F1F0 ATP synthase, which is a large,
            evolutionarily conserved enzyme complex required for ATP
            synthesis; Atp1p [Saccharomyces cerevisiae]
 gi|584807|sp|P07251|ATPA_YEAST ATP synthase alpha chain,
            mitochondrial precursor
 gi|625243|pir||PWBYA H+-transporting two-sector ATPase (EC 3.6.3.14)
            alpha chain precursor - yeast (Saccharomyces cerevisiae)
 gi|496674|emb|CAA56001.1| C-545 protein; ROX3 [Saccharomyces
            cerevisiae]
 gi|536167|emb|CAA84924.1| ATP1 [Saccharomyces cerevisiae]
          Length = 545

 Score =  707 bits (1824), Expect = 0.0
 Identities = 364/535 (68%), Positives = 431/535 (80%)
 Frame = +1

Query: 4    LSKRIVTALNTAVKVQNAGIATTARGMAGASGSEVSKILEERILGTETGINLEETGKVLS 183
            LS+ ++ +   A     A  +T       A  +EVS ILEERI G     NL ETG+VL+
Sbjct: 11   LSRTLINSTKAARPAAAALASTRRLASTKAQPTEVSSILEERIKGVSDEANLNETGRVLA 70

Query: 184  IGDGIARVYGLKNIQAEEMVEFDSGIKGMAMNLXXXXXXXXXXXXXXXIREGDIVKRTGA 363
            +GDGIARV+GL NIQAEE+VEF SG+KGMA+NL               ++EG++VKRTG
Sbjct: 71   VGDGIARVFGLNNIQAEELVEFSSGVKGMALNLEPGQVGIVLFGSDRLVKEGELVKRTGN 130

Query: 364  IVDVPVGDGLLGRVVDALGNPIDGKGPIANARRSRVEVKAPGIIPRLSVREPMVTGVKAV 543
            IVDVPVG GLLGRVVDALGNPIDGKGPI  A RSR +VKAPGI+PR SV EP+ TG+KAV
Sbjct: 131  IVDVPVGPGLLGRVVDALGNPIDGKGPIDAAGRSRAQVKAPGILPRRSVHEPVQTGLKAV 190

Query: 544  DSLVPIGRGQRELIIGDRQTGKTAIAIDTIINQKRFNDAGDDKKKLFCIYVAVGQKRSTV 723
            D+LVPIGRGQRELIIGDRQTGKTA+A+DTI+NQKR+N+  D+ KKL+C+YVAVGQKRSTV
Sbjct: 191  DALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNNGSDESKKLYCVYVAVGQKRSTV 250

Query: 724  AQIVKRLTDAGAMDYTIVVSATASDAAPLQFLAPYSGCAMGEHFRDNGKHALIIFDDLSK 903
            AQ+V+ L    AM Y+I+V+ATAS+AAPLQ+LAP++  ++GE FRDNGKHALI++DDLSK
Sbjct: 251  AQLVQTLEQHDAMKYSIIVAATASEAAPLQYLAPFTAASIGEWFRDNGKHALIVYDDLSK 310

Query: 904  QAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNNSLGGGSLTALPVIETQAGD 1083
            QAVAYRQ+SLLLRRPPGREAYPGDVFYLH RLLERAAK++   G GSLTALPVIETQ GD
Sbjct: 311  QAVAYRQLSLLLRRPPGREAYPGDVFYLHPRLLERAAKLSEKEGSGSLTALPVIETQGGD 370

Query: 1084 VSAYIPTNVISITDGQIFLETELFYKGVRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLE 1263
            VSAYIPTNVISITDGQIFLE ELFYKG+RPAINVGLSVSRVGSAAQ KA+KQVAGS+KL
Sbjct: 371  VSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVKALKQVAGSLKLF 430

Query: 1264 LAQYREVAAFAQFGSDLDASTQQLLNRGVRLTELLKQGQYVPMGIEEQVGVIYAGVKGYL 1443
            LAQYREVAAFAQFGSDLDAST+Q L RG RLT+LLKQ QY P+  EEQV +IYAGV G+L
Sbjct: 431  LAQYREVAAFAQFGSDLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLIYAGVNGHL 490

Query: 1444 DKVDPSAITKFEKEFLAHLRSSQQALLKTIREEGQISPQTDAQLKDVVVNFLATF 1608
            D ++ S I +FE  FL++L+S+   LL  IRE+G++S +  A LK    +F+ATF
Sbjct: 491  DGIELSRIGEFESSFLSYLKSNHNELLTEIREKGELSKELLASLKSATESFVATF 545


>gi|47227593|emb|CAG09590.1| unnamed protein product [Tetraodon
            nigroviridis]
          Length = 534

 Score =  706 bits (1823), Expect = 0.0
 Identities = 375/504 (74%), Positives = 425/504 (83%)
 Frame = +1

Query: 100  SEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMN 279
            +EVS ILEE+I+G +T  +LEETG+VLSIGDGIARVYGL+N+QAEEMVEF SG+KGM++N
Sbjct: 48   AEVSSILEEKIMGADTSADLEETGRVLSIGDGIARVYGLRNVQAEEMVEFSSGLKGMSLN 107

Query: 280  LXXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANAR 459
            L               I+EGDIVKRTGAIVDVPVG+ LLGRVVDALGN I   GP+ +
Sbjct: 108  LEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNAI---GPLGSKT 164

Query: 460  RSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIIN 639
            R RV +KAPGIIPR+SVREPM TG+KAVDSLVPIGRGQREL    RQT +
Sbjct: 165  RRRVGLKAPGIIPRISVREPMQTGIKAVDSLVPIGRGQRELT-HRRQTDR---------- 213

Query: 640  QKRFNDAGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQFL 819
            Q R     + + +      A+GQKRSTVAQ+VKRLTDA AM YTIVVSATASDAAPLQ+L
Sbjct: 214  QNRHCHRHNHQPEAL---QAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYL 270

Query: 820  APYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL 999
            APYSGC+MGE+FRDNGKHALII+DDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL
Sbjct: 271  APYSGCSMGEYFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL 330

Query: 1000 LERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPAI 1179
            LERAAKMN++ GGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKG+RPAI
Sbjct: 331  LERAAKMNDNFGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAI 390

Query: 1180 NVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRLT 1359
            NVGLSVSRVGSAAQT+AMKQVAG+MKLELAQYREVAAFAQFGSDLDA+TQQLLNRGVRLT
Sbjct: 391  NVGLSVSRVGSAAQTRAMKQVAGTMKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLT 450

Query: 1360 ELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQALLKTIRE 1539
            ELLKQGQY PM IEEQV VIYAGV+G+LDK++PS ITKFEK FL H+ S  Q LL  I+
Sbjct: 451  ELLKQGQYSPMAIEEQVAVIYAGVRGHLDKMEPSKITKFEKAFLQHILSQHQDLLAAIKA 510

Query: 1540 EGQISPQTDAQLKDVVVNFLATFK 1611
            +G+IS  +DA+LK +V++FL++F+
Sbjct: 511  DGKISEASDAKLKQIVLSFLSSFE 534


>gi|1660995|dbj|BAA13613.1| defective F1F0-ATPase alpha subunit
            precursor [Saccharomyces cerevisiae]
          Length = 545

 Score =  706 bits (1823), Expect = 0.0
 Identities = 364/535 (68%), Positives = 431/535 (80%)
 Frame = +1

Query: 4    LSKRIVTALNTAVKVQNAGIATTARGMAGASGSEVSKILEERILGTETGINLEETGKVLS 183
            LS+ ++ +   A     A  +T       A  +EVS ILEERI G     NL ETG+VL+
Sbjct: 11   LSRTLINSTKAARPAAAALASTRRLASTKAQPTEVSSILEERIKGVSDEANLNETGRVLA 70

Query: 184  IGDGIARVYGLKNIQAEEMVEFDSGIKGMAMNLXXXXXXXXXXXXXXXIREGDIVKRTGA 363
            +GDGIARV+GL NIQAEE+VEF SG+KGMA+NL               ++EG++VKRTG
Sbjct: 71   VGDGIARVFGLNNIQAEELVEFSSGVKGMALNLEPGQVGIVLFGSDRLVKEGELVKRTGN 130

Query: 364  IVDVPVGDGLLGRVVDALGNPIDGKGPIANARRSRVEVKAPGIIPRLSVREPMVTGVKAV 543
            IVDVPVG GLLGRVVDALGNPIDGKGPI  A RSR +VKAPGI+PR SV EP+ TG+KAV
Sbjct: 131  IVDVPVGPGLLGRVVDALGNPIDGKGPIDAAGRSRAQVKAPGILPRRSVHEPVQTGLKAV 190

Query: 544  DSLVPIGRGQRELIIGDRQTGKTAIAIDTIINQKRFNDAGDDKKKLFCIYVAVGQKRSTV 723
            D+LVPIGRGQRELIIGDRQTGKTA+A+DTI+NQKR+N+  D+ KKL+C+YVAVGQKRSTV
Sbjct: 191  DALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNNGSDESKKLYCVYVAVGQKRSTV 250

Query: 724  AQIVKRLTDAGAMDYTIVVSATASDAAPLQFLAPYSGCAMGEHFRDNGKHALIIFDDLSK 903
            AQ+V+ L    AM Y+I+V+ATAS+AAPLQ+LAP++  ++GE FRDNGKHALI++DDLSK
Sbjct: 251  AQLVQTLEQHDAMKYSIIVAATASEAAPLQYLAPFTAASIGEWFRDNGKHALIVYDDLSK 310

Query: 904  QAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNNSLGGGSLTALPVIETQAGD 1083
            QAVAYRQ+SLLLRRPPGREAYPGDVFYLHSRLLERAAK++   G GSLTALPVIETQ GD
Sbjct: 311  QAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSEKEGSGSLTALPVIETQGGD 370

Query: 1084 VSAYIPTNVISITDGQIFLETELFYKGVRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLE 1263
            VSAYIPTNVISI DGQIFLE ELFYKG+RPAINVGLSVSRVGSAAQ KA+KQVAGS+KL
Sbjct: 371  VSAYIPTNVISIIDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVKALKQVAGSLKLF 430

Query: 1264 LAQYREVAAFAQFGSDLDASTQQLLNRGVRLTELLKQGQYVPMGIEEQVGVIYAGVKGYL 1443
            LAQYREVAAFAQFGSDLDAST+Q L RG RLT+LLKQ QY P+  EEQV +IYAGV G+L
Sbjct: 431  LAQYREVAAFAQFGSDLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLIYAGVNGHL 490

Query: 1444 DKVDPSAITKFEKEFLAHLRSSQQALLKTIREEGQISPQTDAQLKDVVVNFLATF 1608
            D ++ S I +FE  FL++L+S+   LL  IRE+G++S +  A LK    +F+ATF
Sbjct: 491  DGIELSRIGEFESSFLSYLKSNHNELLTEIREKGELSKELLASLKSATESFVATF 545


>gi|2447013|dbj|BAA22509.1| defective F1F0-ATPase alpha subunit
            precursor [Saccharomyces cerevisiae]
          Length = 545

 Score =  706 bits (1822), Expect = 0.0
 Identities = 364/535 (68%), Positives = 431/535 (80%)
 Frame = +1

Query: 4    LSKRIVTALNTAVKVQNAGIATTARGMAGASGSEVSKILEERILGTETGINLEETGKVLS 183
            LS+ ++ +   A     A  +T       A  +EVS ILEERI G     NL ETG+VL+
Sbjct: 11   LSRTLINSTKAARPAAAALASTRRLASTKAQPTEVSSILEERIKGVSDEANLNETGRVLA 70

Query: 184  IGDGIARVYGLKNIQAEEMVEFDSGIKGMAMNLXXXXXXXXXXXXXXXIREGDIVKRTGA 363
            +GDGIARV+GL NIQAEE+VEF SG+KGMA+NL               ++EG++VKRTG
Sbjct: 71   VGDGIARVFGLNNIQAEELVEFSSGVKGMALNLEPGQVGIVLFGSDRLVKEGELVKRTGN 130

Query: 364  IVDVPVGDGLLGRVVDALGNPIDGKGPIANARRSRVEVKAPGIIPRLSVREPMVTGVKAV 543
            IVDVPVG GLLGRVVDALGNPIDGKGPI  A RSR +VKAPGI+PR SV EP+ TG+KAV
Sbjct: 131  IVDVPVGPGLLGRVVDALGNPIDGKGPIDAAGRSRAQVKAPGILPRRSVHEPVQTGLKAV 190

Query: 544  DSLVPIGRGQRELIIGDRQTGKTAIAIDTIINQKRFNDAGDDKKKLFCIYVAVGQKRSTV 723
            D+LVPIGRGQRELIIGDRQTGKTA+A+DTI+NQKR+N+  D+ KKL+C+YVAVGQKRSTV
Sbjct: 191  DALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNNGSDESKKLYCVYVAVGQKRSTV 250

Query: 724  AQIVKRLTDAGAMDYTIVVSATASDAAPLQFLAPYSGCAMGEHFRDNGKHALIIFDDLSK 903
            AQ+V+ L    AM Y+I+V+ATAS+AAPLQ+LAP++  ++ E FRDNGKHALI++DDLSK
Sbjct: 251  AQLVQTLEQHDAMKYSIIVAATASEAAPLQYLAPFTAASIDEWFRDNGKHALIVYDDLSK 310

Query: 904  QAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNNSLGGGSLTALPVIETQAGD 1083
            QAVAYRQ+SLLLRRPPGREAYPGDVFYLHSRLLERAAK++   G GSLTALPVIETQ GD
Sbjct: 311  QAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSEKEGSGSLTALPVIETQGGD 370

Query: 1084 VSAYIPTNVISITDGQIFLETELFYKGVRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLE 1263
            VSAYIPTNVISITDGQIFLE ELFYKG+RPAINVGLSVSRVGSAAQ KA+KQVAGS+KL
Sbjct: 371  VSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVKALKQVAGSLKLF 430

Query: 1264 LAQYREVAAFAQFGSDLDASTQQLLNRGVRLTELLKQGQYVPMGIEEQVGVIYAGVKGYL 1443
            LAQYREVAAFAQFGSDLDAST+Q L RG RLT+LLKQ QY P+  EEQV +IYAGV G+L
Sbjct: 431  LAQYREVAAFAQFGSDLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLIYAGVNGHL 490

Query: 1444 DKVDPSAITKFEKEFLAHLRSSQQALLKTIREEGQISPQTDAQLKDVVVNFLATF 1608
            D ++ S I +FE  FL++L+S+   LL  IRE+G++S +  A LK    +F+ATF
Sbjct: 491  DGIELSRIGEFESSFLSYLKSNHNELLTEIREKGELSKELLASLKSATESFVATF 545


>gi|50294700|ref|XP_449761.1| unnamed protein product [Candida
            glabrata]
 gi|49529075|emb|CAG62739.1| unnamed protein product [Candida glabrata
            CBS138]
          Length = 543

 Score =  706 bits (1821), Expect = 0.0
 Identities = 362/538 (67%), Positives = 436/538 (80%), Gaps = 2/538 (0%)
 Frame = +1

Query: 1    MLSKRIVTALNTAVKVQNAGIA-TTARGMAG-ASGSEVSKILEERILGTETGINLEETGK 174
            +L++  + A++ A +     +  T+AR  A  A  +EVS ILEE+I G      L ETG+
Sbjct: 6    VLARNALRAVSRASRASRGSVVRTSARCYAAKAQPTEVSSILEEKIRGVSDEAQLNETGR 65

Query: 175  VLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMNLXXXXXXXXXXXXXXXIREGDIVKR 354
            VL++GDGIARV+GL NIQAEE+VEF SG+KGMA+NL               ++EG+IVKR
Sbjct: 66   VLAVGDGIARVFGLNNIQAEELVEFASGVKGMALNLEPGQVGIVLFGSDRLVKEGEIVKR 125

Query: 355  TGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANARRSRVEVKAPGIIPRLSVREPMVTGV 534
            TG IVDVPVG GLLGRVVDALGNPIDGKGPI +   +R +VKAPGI+PR SV EP+ TG+
Sbjct: 126  TGKIVDVPVGPGLLGRVVDALGNPIDGKGPIESVGTARAQVKAPGILPRRSVHEPVQTGL 185

Query: 535  KAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIINQKRFNDAGDDKKKLFCIYVAVGQKR 714
            KAVD+LVPIGRGQRELIIGDRQTGKTA+A+DTI+NQKR+ND  D+ KKL+C+YVA+GQKR
Sbjct: 186  KAVDALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNDGNDESKKLYCVYVAIGQKR 245

Query: 715  STVAQIVKRLTDAGAMDYTIVVSATASDAAPLQFLAPYSGCAMGEHFRDNGKHALIIFDD 894
            STVAQ+V+ L    A+ Y+I+V+ATAS+AAPLQ+LAP++  ++GE FRDNGKHALI++DD
Sbjct: 246  STVAQLVQTLEQHDALKYSIIVAATASEAAPLQYLAPFTAASIGEWFRDNGKHALIVYDD 305

Query: 895  LSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNNSLGGGSLTALPVIETQ 1074
            LSKQAVAYRQ+SLLLRRPPGREAYPGDVFYLHSRLLERAAKM++  G GSLTALPVIETQ
Sbjct: 306  LSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDKEGAGSLTALPVIETQ 365

Query: 1075 AGDVSAYIPTNVISITDGQIFLETELFYKGVRPAINVGLSVSRVGSAAQTKAMKQVAGSM 1254
             GDVSAYIPTNVISITDGQIFLE ELFYKG+RPAINVGLSVSRVGSAAQ KA+KQVAGS+
Sbjct: 366  GGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVKALKQVAGSL 425

Query: 1255 KLELAQYREVAAFAQFGSDLDASTQQLLNRGVRLTELLKQGQYVPMGIEEQVGVIYAGVK 1434
            KL LAQYREVAAFAQFGSDLDAST+Q L RG RLT+LLKQ QY P+  EEQV +IYAGV
Sbjct: 426  KLFLAQYREVAAFAQFGSDLDASTKQTLVRGERLTQLLKQSQYSPLAAEEQVPLIYAGVN 485

Query: 1435 GYLDKVDPSAITKFEKEFLAHLRSSQQALLKTIREEGQISPQTDAQLKDVVVNFLATF 1608
            GYLD +D   I +FE  FLA+L+S+ + +L  IR++G+++    A LK    +F+ATF
Sbjct: 486  GYLDNIDLGRIAEFESSFLAYLKSNHENILNDIRDKGELTKDLLATLKSATESFVATF 543


>gi|19115831|ref|NP_594919.1| atp synthase alpha chain, mitochondrial
            precursor (EC 3.6.1.34) [Schizosaccharomyces pombe]
 gi|114526|sp|P24487|ATPA_SCHPO ATP synthase alpha chain,
            mitochondrial precursor
 gi|101036|pir||A39036 H+-transporting two-sector ATPase (EC 3.6.3.14)
            alpha chain precursor - fission yeast
            (Schizosaccharomyces pombe)
 gi|173347|gb|AAA35286.1| ATP-synthase alpha-subunit
 gi|2330687|emb|CAB11207.1| F1-ATPase alpha subunit (PMID 1824697);
            similar to S. cerevisiae YBL099W [Schizosaccharomyces
            pombe]
          Length = 536

 Score =  704 bits (1817), Expect = 0.0
 Identities = 357/515 (69%), Positives = 427/515 (82%), Gaps = 1/515 (0%)
 Frame = +1

Query: 67   TTARGMAG-ASGSEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMV 243
            T  RG A  A+ +EV  ILEERI G      + E+G+VLSIGDGIAR+ GL N+QAEE+V
Sbjct: 22   TLKRGYAEKAAPTEVPSILEERIRGAYNQAQMMESGRVLSIGDGIARISGLSNVQAEELV 81

Query: 244  EFDSGIKGMAMNLXXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGN 423
            EF SGIKGMA+NL               +REG++VKRT  IVDVPVG+ LLGRVVDALGN
Sbjct: 82   EFSSGIKGMALNLEADTVGCVLFGNDRLVREGEVVKRTRHIVDVPVGEALLGRVVDALGN 141

Query: 424  PIDGKGPIANARRSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQT 603
            PIDGKGPI    R RV++KAPGI+PR SV EPM TG+KA+DS+VPIGRGQRELIIGDRQT
Sbjct: 142  PIDGKGPIKTTERRRVQLKAPGILPRTSVCEPMQTGLKAIDSMVPIGRGQRELIIGDRQT 201

Query: 604  GKTAIAIDTIINQKRFNDAGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVS 783
            GKTAIA+DTI+N KR+N++ D+ KKL+C+YVAVGQKRSTVAQ+V++L +  ++ Y+I+V+
Sbjct: 202  GKTAIALDTILNHKRWNNSSDESKKLYCVYVAVGQKRSTVAQLVQKLEENDSLKYSIIVA 261

Query: 784  ATASDAAPLQFLAPYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREA 963
            ATAS++APLQ+LAP+SGCAMGE FRDNGKH L+++DDLSKQAVAYRQMSLLLRRPPGREA
Sbjct: 262  ATASESAPLQYLAPFSGCAMGEWFRDNGKHGLVVYDDLSKQAVAYRQMSLLLRRPPGREA 321

Query: 964  YPGDVFYLHSRLLERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLE 1143
            YPGDVFYLHSRLLERAAKM+   GGGSLTALPVIETQ GDVSAYIPTNVISITDGQIFLE
Sbjct: 322  YPGDVFYLHSRLLERAAKMSPKHGGGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLE 381

Query: 1144 TELFYKGVRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDAS 1323
            +ELF+KG+RPAINVGLSVSRVGSAAQ KAMKQVAG +KL LAQYREVA+FAQFGSDLDA
Sbjct: 382  SELFFKGIRPAINVGLSVSRVGSAAQVKAMKQVAGQIKLFLAQYREVASFAQFGSDLDAG 441

Query: 1324 TQQLLNRGVRLTELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLR 1503
            T+  L+RG+RLTELLKQ QY P+ +EEQV +IY GVKGYLDK+    + +FE +F+ +LR
Sbjct: 442  TRATLDRGLRLTELLKQPQYSPLAVEEQVPLIYCGVKGYLDKIPVDRVVEFEHKFIPYLR 501

Query: 1504 SSQQALLKTIREEGQISPQTDAQLKDVVVNFLATF 1608
            SS   +++ IR+EG +S  T+  LK V+  FL++F
Sbjct: 502  SSGAEIMEAIRKEGVLSKTTEDSLKAVIKEFLSSF 536


>gi|50308493|ref|XP_454248.1| ATPA_KLULA [Kluyveromyces lactis]
 gi|1352026|sp|P49375|ATPA_KLULA ATP synthase alpha chain,
            mitochondrial precursor
 gi|1362247|pir||S56152 H+-transporting two-sector ATPase (EC
            3.6.3.14) alpha protein precursor - yeast (Kluyveromyces
            marxianus var. lactis)
 gi|899311|emb|CAA55723.1| alpha-subunit of mitochondrial ATP synthase
            [Kluyveromyces lactis]
 gi|49643383|emb|CAG99335.1| ATPA_KLULA [Kluyveromyces lactis NRRL
            Y-1140]
          Length = 548

 Score =  703 bits (1814), Expect = 0.0
 Identities = 361/538 (67%), Positives = 435/538 (80%), Gaps = 2/538 (0%)
 Frame = +1

Query: 1    MLSKRIVTALNTAVKVQNAGIATTARGMAGASG--SEVSKILEERILGTETGINLEETGK 174
            +++  +V ++N   +V    +    R  A A    +EVS ILEERI G     NL ETG+
Sbjct: 14   VVAANLVRSMN---RVARPALVVAGRRFASAKAQPTEVSSILEERIRGVSEESNLNETGR 70

Query: 175  VLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMNLXXXXXXXXXXXXXXXIREGDIVKR 354
            VL++GDGIARV+GL N+QAEE+VEF SG+KGMA+NL               ++EG++VKR
Sbjct: 71   VLAVGDGIARVFGLNNVQAEELVEFSSGVKGMALNLEPGQVGIVLFGSDRLVKEGEVVKR 130

Query: 355  TGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANARRSRVEVKAPGIIPRLSVREPMVTGV 534
            TG IVDV VG  LLGRVVDALGNPIDGKGPI  + RSR +VKAPGI+PR SV EP+ TG+
Sbjct: 131  TGKIVDVGVGPELLGRVVDALGNPIDGKGPINASGRSRAQVKAPGILPRRSVHEPVQTGL 190

Query: 535  KAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIINQKRFNDAGDDKKKLFCIYVAVGQKR 714
            K+VD+LVPIGRGQRELIIGDRQTGKTA+A+DTI+NQKR+N+  D+ KKL+C+YVAVGQKR
Sbjct: 191  KSVDALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNNGTDESKKLYCVYVAVGQKR 250

Query: 715  STVAQIVKRLTDAGAMDYTIVVSATASDAAPLQFLAPYSGCAMGEHFRDNGKHALIIFDD 894
            STVAQ+V+ L    A+ Y+I+V+ATAS+AAPLQ++AP++  A+GE FRDNG+HALII+DD
Sbjct: 251  STVAQLVQTLEQHDALKYSIIVAATASEAAPLQYIAPFTAAAIGEWFRDNGRHALIIYDD 310

Query: 895  LSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNNSLGGGSLTALPVIETQ 1074
            LSKQAVAYRQ+SLLLRRPPGREAYPGDVFYLHSRLLERAAKM+   GGGSLTALPVIETQ
Sbjct: 311  LSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSEKNGGGSLTALPVIETQ 370

Query: 1075 AGDVSAYIPTNVISITDGQIFLETELFYKGVRPAINVGLSVSRVGSAAQTKAMKQVAGSM 1254
             GDVSAYIPTNVISITDGQIFLE ELFYKG+RPAINVGLSVSRVGSAAQ KA+KQVAGS+
Sbjct: 371  GGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVKALKQVAGSL 430

Query: 1255 KLELAQYREVAAFAQFGSDLDASTQQLLNRGVRLTELLKQGQYVPMGIEEQVGVIYAGVK 1434
            KL LAQYREVAAFAQFGSDLDAST+Q L RG RLT+LLKQ QY P+  EEQV +IYAGV
Sbjct: 431  KLFLAQYREVAAFAQFGSDLDASTKQTLARGERLTQLLKQNQYSPLAAEEQVPLIYAGVN 490

Query: 1435 GYLDKVDPSAITKFEKEFLAHLRSSQQALLKTIREEGQISPQTDAQLKDVVVNFLATF 1608
            GYLD +D S I +FE +FLA+L+++   ++  IRE+G++S +  A LK    +F+ATF
Sbjct: 491  GYLDNIDISRIAEFETKFLAYLKANHDEIVSAIREKGELSKELLATLKSATESFVATF 548


>gi|32422539|ref|XP_331713.1| ATP SYNTHASE ALPHA CHAIN, MITOCHONDRIAL
            PRECURSOR [Neurospora crassa]
 gi|584806|sp|P37211|ATPA_NEUCR ATP synthase alpha chain,
            mitochondrial precursor
 gi|83764|pir||JC1111 H+-transporting two-sector ATPase (EC 3.6.3.14)
            alpha chain - Neurospora crassa
 gi|168759|gb|AAA33560.1| mitochondrial ATPase alpha-subunit
 gi|28927457|gb|EAA36409.1| ATP SYNTHASE ALPHA CHAIN, MITOCHONDRIAL
            PRECURSOR [Neurospora crassa]
          Length = 551

 Score =  702 bits (1811), Expect = 0.0
 Identities = 360/530 (67%), Positives = 431/530 (80%)
 Frame = +1

Query: 19   VTALNTAVKVQNAGIATTARGMAGASGSEVSKILEERILGTETGINLEETGKVLSIGDGI 198
            V A N A  V      T A   A A+ +EVS ILE+RI G +   NL ETG+VLS+GDGI
Sbjct: 22   VAARNAAPVVSAVQARTYAD--AKATPTEVSSILEQRIRGVQEESNLAETGRVLSVGDGI 79

Query: 199  ARVYGLKNIQAEEMVEFDSGIKGMAMNLXXXXXXXXXXXXXXXIREGDIVKRTGAIVDVP 378
            ARV+G+ N+QAEE+VEF SG+KGM MNL               ++EG+ VKRTG IVDVP
Sbjct: 80   ARVHGMANVQAEELVEFASGVKGMCMNLEAGQVGVVLFGSDRLVKEGETVKRTGEIVDVP 139

Query: 379  VGDGLLGRVVDALGNPIDGKGPIANARRSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVP 558
            VG  LLGRV+DALGNPIDGKGPI    + R ++KAPGI+PR SV +P+ TG+K+VD++VP
Sbjct: 140  VGPELLGRVIDALGNPIDGKGPINCKEKRRAQLKAPGILPRQSVNQPVQTGLKSVDAMVP 199

Query: 559  IGRGQRELIIGDRQTGKTAIAIDTIINQKRFNDAGDDKKKLFCIYVAVGQKRSTVAQIVK 738
            IGRGQRELIIGDRQTGKTA+A+D I+NQKR+N   D+ KKL+C+YVAVGQKRSTVAQ+VK
Sbjct: 200  IGRGQRELIIGDRQTGKTAVALDAILNQKRWNSGSDEDKKLYCVYVAVGQKRSTVAQLVK 259

Query: 739  RLTDAGAMDYTIVVSATASDAAPLQFLAPYSGCAMGEHFRDNGKHALIIFDDLSKQAVAY 918
             L +  AM Y+IVV+ATAS+AAPLQ+LAP++G  +GE+FRDNGKH+L+IFDDL+KQAVAY
Sbjct: 260  TLEENDAMKYSIVVAATASEAAPLQYLAPFTGACVGEYFRDNGKHSLVIFDDLTKQAVAY 319

Query: 919  RQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNNSLGGGSLTALPVIETQAGDVSAYI 1098
            RQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMN + GGGS+TALPVIETQ GDVSAYI
Sbjct: 320  RQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNKTHGGGSMTALPVIETQGGDVSAYI 379

Query: 1099 PTNVISITDGQIFLETELFYKGVRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYR 1278
            PTNVISITDGQIFLE+ELFYKGVRPAINVGLSVSRVGSAAQ KAMKQVAGS+KL LAQYR
Sbjct: 380  PTNVISITDGQIFLESELFYKGVRPAINVGLSVSRVGSAAQLKAMKQVAGSLKLFLAQYR 439

Query: 1279 EVAAFAQFGSDLDASTQQLLNRGVRLTELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDP 1458
            EVAAFAQFGSDLDA+T+Q LNRG RLTELLKQ QY PM + E V +I+AGV G+LD V
Sbjct: 440  EVAAFAQFGSDLDAATKQTLNRGERLTELLKQKQYSPMAVNEMVPLIFAGVNGFLDSVPV 499

Query: 1459 SAITKFEKEFLAHLRSSQQALLKTIREEGQISPQTDAQLKDVVVNFLATF 1608
            + I ++E +FLAHL++++  ++ TI +EG IS   +A+L+DV+  F  +F
Sbjct: 500  AKILQWEADFLAHLKTNEPEIMATIDKEGAISKDLEAKLRDVIQTFTKSF 549


>gi|11497478|ref|NP_042268.1| H(+)-transporting ATPase, subunit 1
            [Prototheca wickerhamii]
 gi|7436112|pir||T11937 H+-transporting two-sector ATPase (EC
            3.6.3.14) alpha chain - Prototheca wickerhamii
            mitochondrion
 gi|467869|gb|AAD12656.1| H(+)-transporting ATPase, subunit 1
            [Prototheca wickerhamii]
          Length = 509

 Score =  701 bits (1810), Expect = 0.0
 Identities = 362/503 (71%), Positives = 418/503 (82%)
 Frame = +1

Query: 100  SEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMN 279
            SE+S +LE++I  T + IN++E G+VLS+GDGIAR+YGLK IQA EMVEF SG+KGMA+N
Sbjct: 6    SEISILLEQKISNTYSKINVDEVGRVLSVGDGIARIYGLKKIQAGEMVEFASGVKGMALN 65

Query: 280  LXXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANAR 459
            L               I EGD+VKRTG IVDVP G G+LGRV+D LGNPIDGKGP+ +
Sbjct: 66   LENDNVGVVLFGSDSSISEGDLVKRTGTIVDVPSGKGVLGRVLDGLGNPIDGKGPLKDVT 125

Query: 460  RSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIIN 639
            R R E+KAPGII R SV +PM TG+KAVDSLVPIGRGQRELIIGDRQTGKTAIA+D IIN
Sbjct: 126  RVRAELKAPGIIVRESVNQPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIALDAIIN 185

Query: 640  QKRFNDAGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQFL 819
            QK  N + D+  KL+C+YVA+GQKRSTVAQIVK L DAGA+DYT++V+ATASD APLQ+L
Sbjct: 186  QKFVNVSKDESAKLYCVYVAIGQKRSTVAQIVKTLEDAGALDYTVIVAATASDPAPLQYL 245

Query: 820  APYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL 999
            APYSGCAMGE+FRDNG HALII+DDLSKQ+VAYRQMSLLLRRPPGREA+PGDVFYLHSRL
Sbjct: 246  APYSGCAMGEYFRDNGMHALIIYDDLSKQSVAYRQMSLLLRRPPGREAFPGDVFYLHSRL 305

Query: 1000 LERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPAI 1179
            LERAAKM++++GGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKG+RPAI
Sbjct: 306  LERAAKMSSAVGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAI 365

Query: 1180 NVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRLT 1359
            NVGLSVSRVGSAAQ KAMKQVAG+MKLELAQYREVAAFAQFGSDLDASTQ LLNRG RLT
Sbjct: 366  NVGLSVSRVGSAAQVKAMKQVAGTMKLELAQYREVAAFAQFGSDLDASTQYLLNRGARLT 425

Query: 1360 ELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQALLKTIRE 1539
            E+LKQGQ+ PM IE+QV V+YA  KGYLDK++ S I K+E+  L  +     A+L TI++
Sbjct: 426  EILKQGQFSPMPIEKQVIVLYAATKGYLDKLNISDIEKYEQTLLKEI---DPAILSTIKD 482

Query: 1540 EGQISPQTDAQLKDVVVNFLATF 1608
            +  +S +    LK     F   F
Sbjct: 483  KKALSDELLGTLKTFFDGFTDRF 505


>gi|38107282|gb|EAA53475.1| hypothetical protein MG07752.4
            [Magnaporthe grisea 70-15]
          Length = 551

 Score =  700 bits (1807), Expect = 0.0
 Identities = 362/541 (66%), Positives = 441/541 (80%), Gaps = 7/541 (1%)
 Frame = +1

Query: 7    SKRIVTALNTAVKV--QNAGIATTARGMAG----ASGSEVSKILEERILGTETGINLEET 168
            S R V A++ + +V  +NA  A  +R        AS +EVS ILE+RI G +    L ET
Sbjct: 9    STRAVGAVSASGRVAARNAAPAFASRQARTYADKASPTEVSSILEQRIRGVQEEAGLAET 68

Query: 169  GKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMNLXXXXXXXXXXXXXXXIREGDIV 348
            G+VLS+GDGIARV+G+ N+QAEE+VEF SG+KGM MNL               ++EG+ V
Sbjct: 69   GRVLSVGDGIARVHGMANVQAEELVEFASGVKGMCMNLEAGQVGVVLFGSDRLVKEGETV 128

Query: 349  KRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANARRSRVEVKAPGIIPRLSVREPMVT 528
            KRTG IVD+PVG  +LGRVVDALGNPIDGKGPI    RSR ++KAPGI+PR SV +P+ T
Sbjct: 129  KRTGEIVDIPVGPEMLGRVVDALGNPIDGKGPINTKERSRAQLKAPGILPRQSVNQPVQT 188

Query: 529  GVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIINQKRFNDAGDDKKKLFCIYVAVGQ 708
            G+K+VD++VPIGRGQRELIIGDRQTGKTA+A+D ++NQKR+N++ D+ KKL+C+YVAVGQ
Sbjct: 189  GLKSVDAMVPIGRGQRELIIGDRQTGKTAVALDAMLNQKRWNNSNDETKKLYCVYVAVGQ 248

Query: 709  KRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQFLAPYSGCAMGEHFRDNGKHALIIF 888
            KRSTVAQ+VK L +  AM Y++VV+ATAS+AAPLQ+LAP++G ++GE FRDNGKH+L+IF
Sbjct: 249  KRSTVAQLVKTLEENDAMRYSVVVAATASEAAPLQYLAPFTGASIGEWFRDNGKHSLVIF 308

Query: 889  DDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNN-SLGGGSLTALPVI 1065
            DDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNN + GGGS+TALP+I
Sbjct: 309  DDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNNRTHGGGSMTALPII 368

Query: 1066 ETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPAINVGLSVSRVGSAAQTKAMKQVA 1245
            ETQ GDVSAYIPTNVISITDGQIFLE ELFYKG+RPAINVGLSVSRVGSAAQ KAMKQVA
Sbjct: 369  ETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQLKAMKQVA 428

Query: 1246 GSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRLTELLKQGQYVPMGIEEQVGVIYA 1425
            GS+KL LAQYREVAAFAQFGSDLDA+T+Q LNRG RLTELLKQ QY PM + E V +I+A
Sbjct: 429  GSLKLFLAQYREVAAFAQFGSDLDAATKQTLNRGERLTELLKQKQYSPMAVNEMVPLIFA 488

Query: 1426 GVKGYLDKVDPSAITKFEKEFLAHLRSSQQALLKTIREEGQISPQTDAQLKDVVVNFLAT 1605
            GV G+LD V  + I ++E +FL+HL++++  LL TI +EG IS   +A+L+DVV +F  +
Sbjct: 489  GVNGFLDNVPVAKILQWEADFLSHLKTNESDLLATIEKEGAISKDLEARLRDVVGSFTKS 548

Query: 1606 F 1608
            F
Sbjct: 549  F 549


>gi|15889879|ref|NP_355560.1| AGR_C_4757p [Agrobacterium tumefaciens
            str. C58]
 gi|17936499|ref|NP_533289.1| ATP synthase alpha chain [Agrobacterium
            tumefaciens str. C58]
 gi|25290455|pir||H97673 ATP synthase alpha chain [imported] -
            Agrobacterium tumefaciens (strain C58, Cereon)
 gi|25290457|pir||AG2898 ATP synthase alpha chain atpA [imported] -
            Agrobacterium tumefaciens (strain C58, Dupont)
 gi|15157826|gb|AAK88345.1| AGR_C_4757p [Agrobacterium tumefaciens
            str. C58]
 gi|17741124|gb|AAL43605.1| ATP synthase alpha chain [Agrobacterium
            tumefaciens str. C58]
          Length = 509

 Score =  699 bits (1804), Expect = 0.0
 Identities = 355/503 (70%), Positives = 418/503 (82%)
 Frame = +1

Query: 100  SEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMN 279
            +E+S IL+++I        + E G+VLS+GDGIARVYGL N+QA EMVEF  GI+GMA+N
Sbjct: 6    AEISAILKDQIKNFGNEAEVSEVGQVLSVGDGIARVYGLDNVQAGEMVEFPGGIRGMALN 65

Query: 280  LXXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANAR 459
            L               I+EGD VKRTGAIVDVPVG  LLGRVVDALGNPIDGKGPI  A+
Sbjct: 66   LEADNVGVVIFGSDRSIKEGDTVKRTGAIVDVPVGPELLGRVVDALGNPIDGKGPINAAK 125

Query: 460  RSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIIN 639
            RSRV+VKAPGIIPR SV EPM TG+KA+D+L+P+GRGQREL+IGDRQTGKTAI +DTI+N
Sbjct: 126  RSRVDVKAPGIIPRKSVHEPMSTGLKAIDALIPVGRGQRELVIGDRQTGKTAIILDTILN 185

Query: 640  QKRFNDAGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQFL 819
            QK  +D G D  KL+C+YVA+GQKRSTVAQ VK L + GA+ Y+I+V+ATASD AP+Q+L
Sbjct: 186  QKAIHDNGPDGDKLYCVYVAIGQKRSTVAQFVKVLEERGALQYSIIVAATASDPAPMQYL 245

Query: 820  APYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL 999
            AP++GCAMGE+FRDNGKHALI +DDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL
Sbjct: 246  APFAGCAMGEYFRDNGKHALIGYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL 305

Query: 1000 LERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPAI 1179
            LERAAK+++ +G GSLTALPVIETQ  DVSA+IPTNVISITDGQIFLET+LFY+G+RPA+
Sbjct: 306  LERAAKLSDEMGAGSLTALPVIETQGNDVSAFIPTNVISITDGQIFLETDLFYQGIRPAV 365

Query: 1180 NVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRLT 1359
            NVGLSVSRVGSAAQ KAMKQVAGS+K ELAQYRE+AAFAQFGSDLDASTQ+LLNRG RLT
Sbjct: 366  NVGLSVSRVGSAAQIKAMKQVAGSIKGELAQYREMAAFAQFGSDLDASTQRLLNRGARLT 425

Query: 1360 ELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQALLKTIRE 1539
            ELLKQ Q+ P+  EEQV VI+AGV GYLDK+  + + KFE+ FL++LRS  +A+L TIR
Sbjct: 426  ELLKQPQFSPLKTEEQVAVIFAGVNGYLDKIPVAQVGKFEQGFLSYLRSEGKAILDTIRT 485

Query: 1540 EGQISPQTDAQLKDVVVNFLATF 1608
            E  IS  T  +LK  + NF  +F
Sbjct: 486  EKAISDDTKGKLKGALDNFAKSF 508


>gi|38422323|emb|CAE45325.1| unnamed protein product [Magnetospirillum
            gryphiswaldense]
          Length = 509

 Score =  699 bits (1803), Expect = 0.0
 Identities = 360/503 (71%), Positives = 414/503 (81%)
 Frame = +1

Query: 100  SEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMN 279
            +E+S IL+++I    T   + E G+VLS+GDGIARV+GL  +QA EMVEF  GIKGMA+N
Sbjct: 6    AEISAILKQQIANFGTEAEVAEVGQVLSVGDGIARVHGLDKVQAGEMVEFPGGIKGMALN 65

Query: 280  LXXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANAR 459
            L               I+EGD VKRTGAIV+VPVG GLLGRVVD LGNPIDGKGPI  +
Sbjct: 66   LETDNVGIVIFGDDRAIKEGDTVKRTGAIVEVPVGKGLLGRVVDGLGNPIDGKGPIDASG 125

Query: 460  RSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIIN 639
             SRV+VKAPGIIPR SV EPM TG+KAVD+L+PIGRGQREL+IGDRQTGKTAI +DTIIN
Sbjct: 126  MSRVDVKAPGIIPRKSVHEPMSTGIKAVDALIPIGRGQRELVIGDRQTGKTAILVDTIIN 185

Query: 640  QKRFNDAGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQFL 819
            QKR++D   +K KLFCIYVAVGQKRSTVAQIVK LTD GAMDYTIVV+ATAS+AAPLQF+
Sbjct: 186  QKRWHDQSVEKDKLFCIYVAVGQKRSTVAQIVKTLTDYGAMDYTIVVAATASEAAPLQFI 245

Query: 820  APYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL 999
            APY+GC MGE+FRDNG HALII+DDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL
Sbjct: 246  APYTGCTMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL 305

Query: 1000 LERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPAI 1179
            LERAAKM ++ G GSLTALPVIETQA DVSAYIPTNVISITDGQIFLETELFYKG+RPA+
Sbjct: 306  LERAAKMGDAAGAGSLTALPVIETQANDVSAYIPTNVISITDGQIFLETELFYKGIRPAV 365

Query: 1180 NVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRLT 1359
            NVGLSVSRVGSAAQ KAMKQVAG++K+ELAQYRE+AAFAQF SDLD +TQ+LL RG RLT
Sbjct: 366  NVGLSVSRVGSAAQIKAMKQVAGTIKMELAQYREMAAFAQFASDLDPATQKLLARGARLT 425

Query: 1360 ELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQALLKTIRE 1539
            ELLKQ Q+ PM  EE+V  I+AGVKGYLDK+D   + +FEK  L+ +++    +L  I
Sbjct: 426  ELLKQPQFAPMSTEEEVVSIFAGVKGYLDKLDVRDVGRFEKGLLSEIKAKAPEVLTAIAT 485

Query: 1540 EGQISPQTDAQLKDVVVNFLATF 1608
            E QIS  T+ +LK  +  +  TF
Sbjct: 486  EKQISGDTEGKLKAFLDGYAKTF 508


>gi|50257459|gb|EAL20166.1| hypothetical protein CNBF2430
            [Cryptococcus neoformans var. neoformans B-3501A]
          Length = 540

 Score =  698 bits (1802), Expect = 0.0
 Identities = 363/528 (68%), Positives = 421/528 (78%)
 Frame = +1

Query: 25   ALNTAVKVQNAGIATTARGMAGASGSEVSKILEERILGTETGINLEETGKVLSIGDGIAR 204
            A+    + + A +A      A  + SEVS ILE RI G   G +++ETG+VL+IGDGIAR
Sbjct: 12   AVAQTARARVAPLAVRTYATAKPAASEVSSILEGRIAGASAGGDVQETGRVLTIGDGIAR 71

Query: 205  VYGLKNIQAEEMVEFDSGIKGMAMNLXXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVG 384
            VYGL+N+QAEEMVEF SG++GM +NL               I+EGD VKRTG IVDVPVG
Sbjct: 72   VYGLRNVQAEEMVEFSSGVRGMCLNLEADNVGVTIFGNDRLIKEGDTVKRTGQIVDVPVG 131

Query: 385  DGLLGRVVDALGNPIDGKGPIANARRSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIG 564
             GLLGRVVDALGNPIDGKGPI    R++ ++KAPGI+PR SV EPM TG+K+VDSLVPIG
Sbjct: 132  PGLLGRVVDALGNPIDGKGPIKADGRTKAQLKAPGILPRRSVHEPMQTGLKSVDSLVPIG 191

Query: 565  RGQRELIIGDRQTGKTAIAIDTIINQKRFNDAGDDKKKLFCIYVAVGQKRSTVAQIVKRL 744
            RGQRELIIGDRQTGK+A+A+DTI+NQK++ND  D+ KKL+C+YVAVGQKRSTVAQ+VK L
Sbjct: 192  RGQRELIIGDRQTGKSALAVDTILNQKKWNDGADESKKLYCVYVAVGQKRSTVAQLVKTL 251

Query: 745  TDAGAMDYTIVVSATASDAAPLQFLAPYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQ 924
             +  AM YTI+V+ATAS+AAPLQ+LAP+SGCAMGE FRDNGKHALII+DDLSKQAVAYRQ
Sbjct: 252  EENDAMKYTIIVAATASEAAPLQYLAPFSGCAMGEWFRDNGKHALIIYDDLSKQAVAYRQ 311

Query: 925  MSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPT 1104
            MSLLLRRPPGREAYPGDVFYLHSRLLERAAKMN   G GSLTALP+IETQ GDVSAYIPT
Sbjct: 312  MSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNADYGAGSLTALPIIETQGGDVSAYIPT 371

Query: 1105 NVISITDGQIFLETELFYKGVRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREV 1284
            NVISITDGQIFLE ELF+KGVRPAINVGLSVSRVGSAAQTK MK VAGS+KL LAQYREV
Sbjct: 372  NVISITDGQIFLEAELFFKGVRPAINVGLSVSRVGSAAQTKLMKSVAGSLKLYLAQYREV 431

Query: 1285 AAFAQFGSDLDASTQQLLNRGVRLTELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSA 1464
            AAFAQFGSDLDAST+ LLNRG RLTELLKQ QY PM  E    +IYAGV G LD V
Sbjct: 432  AAFAQFGSDLDASTRYLLNRGARLTELLKQPQYSPMPTEVMAPLIYAGVNGMLDNVPVEK 491

Query: 1465 ITKFEKEFLAHLRSSQQALLKTIREEGQISPQTDAQLKDVVVNFLATF 1608
            IT +EK F   L+S   ALL+ +   G ++ + + ++K ++   +A F
Sbjct: 492  ITAWEKSFTELLKSQHGALLEKL-GGGVLTKEIEEEMKKIIDGHVADF 538


>gi|38638271|ref|NP_943682.1| ATP synthase F1 subunit alpha [Chara
            vulgaris]
 gi|32966585|gb|AAP92168.1| ATP synthase F1 subunit alpha [Chara
            vulgaris]
          Length = 516

 Score =  697 bits (1798), Expect = 0.0
 Identities = 362/506 (71%), Positives = 420/506 (82%), Gaps = 1/506 (0%)
 Frame = +1

Query: 94   SGSEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMA 273
            +G+E+S +LE+RI    T + ++E G+V+S+GDGIARVYGL  IQA EMVEF SG+KGMA
Sbjct: 8    AGAELSTLLEQRITNYYTKLQVDEIGRVVSVGDGIARVYGLNKIQAGEMVEFSSGVKGMA 67

Query: 274  MNLXXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIAN 453
            +NL               I+EGDIVKRTG+IVDVPVG  +LGRVVDALG PIDGKG +
Sbjct: 68   LNLENESVGIVVFGSDTAIKEGDIVKRTGSIVDVPVGRSMLGRVVDALGVPIDGKGALGA 127

Query: 454  ARRSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTI 633
              R RVEVKAPGII R SV EPM TG+KAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTI
Sbjct: 128  VERRRVEVKAPGIISRKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTI 187

Query: 634  INQKRFNDAG-DDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPL 810
            +NQK+ N  G  +K+KL+C+YVA+GQKRSTVAQ+VK L++AGA++Y+I+V+ATASD APL
Sbjct: 188  LNQKQINAKGASEKEKLYCVYVAIGQKRSTVAQLVKILSEAGALEYSIIVAATASDPAPL 247

Query: 811  QFLAPYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLH 990
            QFLAPY+GCAMGE FRDNG HALII+DDLSKQ+VAYRQMSLLLRRPPGREA+PGDVFYLH
Sbjct: 248  QFLAPYAGCAMGEFFRDNGMHALIIYDDLSKQSVAYRQMSLLLRRPPGREAFPGDVFYLH 307

Query: 991  SRLLERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVR 1170
            SRLLERAAKM++  G GSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFY+G+R
Sbjct: 308  SRLLERAAKMSDQAGAGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYRGIR 367

Query: 1171 PAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGV 1350
            PAINVGLSVSRVGSAAQ KAMKQV GS+KLELAQYREVAAFAQFGSDLDA+TQ LLNRG
Sbjct: 368  PAINVGLSVSRVGSAAQLKAMKQVCGSLKLELAQYREVAAFAQFGSDLDAATQYLLNRGA 427

Query: 1351 RLTELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQALLKT 1530
            RLTE+LKQ QY P+ IE+QV VIYA VKGYLD++  S I K+E+E    L+S   +LL
Sbjct: 428  RLTEVLKQPQYSPISIEKQVVVIYAAVKGYLDQIQISQILKYEQEL---LKSIDPSLLSA 484

Query: 1531 IREEGQISPQTDAQLKDVVVNFLATF 1608
            I ++  I+ Q D+QL +    F  +F
Sbjct: 485  IAQQKTITEQIDSQLANFCQKFTQSF 510


>gi|50555055|ref|XP_504936.1| hypothetical protein [Yarrowia
            lipolytica]
 gi|49650806|emb|CAG77741.1| unnamed protein product [Yarrowia
            lipolytica CLIB99]
          Length = 536

 Score =  697 bits (1798), Expect = 0.0
 Identities = 361/516 (69%), Positives = 417/516 (79%)
 Frame = +1

Query: 61   IATTARGMAGASGSEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEM 240
            +A      A A+ +EV+ ILEERI G     NL ETG+VLS+GDGIARV+GL NIQAEE+
Sbjct: 19   VAQRGYAEAKATPTEVTSILEERIRGVSGEANLNETGRVLSVGDGIARVFGLNNIQAEEL 78

Query: 241  VEFDSGIKGMAMNLXXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALG 420
            VEF SG+KGMA+NL               ++EG+ VKR+G+IVDVPVG  LLGRVVDALG
Sbjct: 79   VEFASGVKGMALNLEAGQVGIVLFGSDRLVKEGETVKRSGSIVDVPVGPALLGRVVDALG 138

Query: 421  NPIDGKGPIANARRSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQ 600
            NPIDGKGPI    R R +VKAPGI+PR SV EPM TG+KAVD+LVPIGRGQRELIIGDRQ
Sbjct: 139  NPIDGKGPIETEFRIRAQVKAPGILPRTSVNEPMQTGLKAVDALVPIGRGQRELIIGDRQ 198

Query: 601  TGKTAIAIDTIINQKRFNDAGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVV 780
            TGKT IAIDTI+NQKR+N   D+KKKL+C+YVAVGQKRSTVAQ+V+ L    A+ Y+I+V
Sbjct: 199  TGKTQIAIDTILNQKRWNYGQDEKKKLYCVYVAVGQKRSTVAQLVQTLEHHDALKYSIIV 258

Query: 781  SATASDAAPLQFLAPYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGRE 960
            +ATAS+AAPLQ+LAP++G AMGE FRDNGK ALI+FDDLSKQAVAYRQMSLLLRRPPGRE
Sbjct: 259  AATASEAAPLQYLAPFTGTAMGEWFRDNGKGALIVFDDLSKQAVAYRQMSLLLRRPPGRE 318

Query: 961  AYPGDVFYLHSRLLERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFL 1140
            AYPGDVFYLHSRLLERAAKMN   GGGSLTALP+IETQ GDVSAYIPTNVISITDGQIFL
Sbjct: 319  AYPGDVFYLHSRLLERAAKMNEREGGGSLTALPIIETQGGDVSAYIPTNVISITDGQIFL 378

Query: 1141 ETELFYKGVRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDA 1320
            E ELFYKG+RPAINVGLSVSRVGSAAQ KAMKQVAGS+KL LAQYREVAAFAQFGSDLDA
Sbjct: 379  EAELFYKGIRPAINVGLSVSRVGSAAQVKAMKQVAGSLKLFLAQYREVAAFAQFGSDLDA 438

Query: 1321 STQQLLNRGVRLTELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHL 1500
            ST+Q L RG RLT LLKQ Q  PM  EE V +IYAGV GY+D +    + KFE EF+++L
Sbjct: 439  STKQTLTRGERLTLLLKQKQASPMSSEEMVPLIYAGVNGYIDNIPVKQVEKFEAEFVSYL 498

Query: 1501 RSSQQALLKTIREEGQISPQTDAQLKDVVVNFLATF 1608
             +++  LLK I   G++S +   +LK +  NF+ +F
Sbjct: 499  HANESDLLKDIAATGELSKENLEKLKSITENFVGSF 534


>gi|49087454|ref|XP_405660.1| ATPA_NEUCR ATP synthase alpha chain,
            mitochondrial precursor [Aspergillus nidulans FGSC A4]
 gi|40744623|gb|EAA63779.1| ATPA_NEUCR ATP synthase alpha chain,
            mitochondrial precursor [Aspergillus nidulans FGSC A4]
          Length = 573

 Score =  695 bits (1794), Expect = 0.0
 Identities = 358/525 (68%), Positives = 427/525 (81%), Gaps = 17/525 (3%)
 Frame = +1

Query: 85   AGASGSEVSKILEERILGTETGINLEETGKVLSIG----------DGIARVYGLKNIQAE 234
            A AS +EVS ILE+RI G +    L ETG+VLS+G          DGIARV+G+ N+QAE
Sbjct: 47   AKASPTEVSSILEQRIRGVQEESGLAETGRVLSVGAVTDSILSISDGIARVHGMTNVQAE 106

Query: 235  EMVEFDSGIKGMAMNLXXXXXXXXXXXXXXXIREGDIVKRTGAI-------VDVPVGDGL 393
            E+VEF SG+KGM MNL               ++EG+ VKRTG I       VDVPVG  L
Sbjct: 107  ELVEFASGVKGMCMNLEAGQVGVVLFGSDRLVKEGETVKRTGEIHYLQTIQVDVPVGPEL 166

Query: 394  LGRVVDALGNPIDGKGPIANARRSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQ 573
            LGRVVDALGNPIDGKGPI  + +SR ++KAPGI+PR SV +P+ TG+K VDS+VPIGRGQ
Sbjct: 167  LGRVVDALGNPIDGKGPINASTKSRAQLKAPGILPRRSVNQPVQTGLKCVDSMVPIGRGQ 226

Query: 574  RELIIGDRQTGKTAIAIDTIINQKRFNDAGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDA 753
            RELIIGDRQTGKTA+A+D ++NQKR+N+  D+ KKL+CIYVAVGQKRSTVAQ+VK L +
Sbjct: 227  RELIIGDRQTGKTAVALDAMLNQKRWNNTSDESKKLYCIYVAVGQKRSTVAQLVKTLEEN 286

Query: 754  GAMDYTIVVSATASDAAPLQFLAPYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSL 933
             AM Y+IVV+ATAS+AAPLQ+LAP++GCAMGE FRDNG+HA+I++DDLSKQAVAYRQMSL
Sbjct: 287  DAMKYSIVVAATASEAAPLQYLAPFTGCAMGEWFRDNGRHAVIVYDDLSKQAVAYRQMSL 346

Query: 934  LLRRPPGREAYPGDVFYLHSRLLERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVI 1113
            LLRRPPGREAYPGDVFYLHSRLLERAAKMN+  GGGSLTALPVIETQ GDVSAYIPTNVI
Sbjct: 347  LLRRPPGREAYPGDVFYLHSRLLERAAKMNDKHGGGSLTALPVIETQGGDVSAYIPTNVI 406

Query: 1114 SITDGQIFLETELFYKGVRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAF 1293
            SITDGQIFLE ELFYKG+RPAINVGLSVSRVGSAAQ KAMKQVAGS+KL LAQYREVAAF
Sbjct: 407  SITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVKAMKQVAGSLKLFLAQYREVAAF 466

Query: 1294 AQFGSDLDASTQQLLNRGVRLTELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITK 1473
            AQFGSDLDAST+Q LNRG RLTELLKQ QY PM + + V +I+AGV GYLD +  + I +
Sbjct: 467  AQFGSDLDASTKQTLNRGQRLTELLKQKQYSPMAVSDMVPLIFAGVNGYLDNIPVAKILQ 526

Query: 1474 FEKEFLAHLRSSQQALLKTIREEGQISPQTDAQLKDVVVNFLATF 1608
            +E +FLA+L+S+   + +TI +EGQ+S + +A+LKD++ +F  +F
Sbjct: 527  WESDFLAYLKSNHPEVQETIEKEGQVSKELEAKLKDIIPSFNKSF 571


>gi|11467148|ref|NP_054447.1| atpA [Marchantia polymorpha]
 gi|416672|sp|P26854|ATP0_MARPO ATP synthase alpha chain,
            mitochondrial
 gi|282754|pir||S25955 H+-transporting two-sector ATPase (EC 3.6.3.14)
            alpha chain - liverwort (Marchantia polymorpha)
            mitochondrion
 gi|786232|gb|AAC09446.1| atpA [Marchantia polymorpha]
          Length = 513

 Score =  694 bits (1790), Expect = 0.0
 Identities = 361/506 (71%), Positives = 418/506 (82%), Gaps = 1/506 (0%)
 Frame = +1

Query: 94   SGSEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMA 273
            +G+E+S +LE+RI    T + ++E G+V+S+GDGIARVYGL  IQA EMVEF SG+KGMA
Sbjct: 5    AGAELSTLLEQRITNYYTKLQVDEIGRVVSVGDGIARVYGLNKIQAGEMVEFASGVKGMA 64

Query: 274  MNLXXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIAN 453
            +NL               I+EGDIVKRTG+IVDVPVG G+LGRVVDALG PIDGKG ++
Sbjct: 65   LNLENENVGIVIFGSDTAIKEGDIVKRTGSIVDVPVGKGMLGRVVDALGVPIDGKGALSA 124

Query: 454  ARRSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTI 633
              R RVEVKAPGII R SV EPM TG+KAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTI
Sbjct: 125  VERRRVEVKAPGIIARKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTI 184

Query: 634  INQKRFNDAG-DDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPL 810
            +NQK+ N  G  D +KL+C+YVA+GQKRSTVAQ+VK L++AGA++Y+I+V+ATASD APL
Sbjct: 185  LNQKQINAQGTSDSEKLYCVYVAIGQKRSTVAQLVKILSEAGALEYSIIVAATASDPAPL 244

Query: 811  QFLAPYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLH 990
            QFLAPYSGCAMGE+FRDNG HALII+DDLSKQ+VAYRQMSLLLRRPPGREA+PGDVFYLH
Sbjct: 245  QFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQSVAYRQMSLLLRRPPGREAFPGDVFYLH 304

Query: 991  SRLLERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVR 1170
            SRLLERAAKM++  G GSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFY+G R
Sbjct: 305  SRLLERAAKMSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYRGSR 364

Query: 1171 PAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGV 1350
            PAINVGLSVSRVGSAAQ KAMKQV GS+KLELAQYREVAAFAQFGSDLDA+TQ LLNRG
Sbjct: 365  PAINVGLSVSRVGSAAQLKAMKQVCGSLKLELAQYREVAAFAQFGSDLDAATQYLLNRGA 424

Query: 1351 RLTELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQALLKT 1530
            RLTE+LKQ QY P+ IE+Q+ VIYA VKGYLD++  + IT +E+E    L+S    LL
Sbjct: 425  RLTEILKQAQYSPIPIEKQIVVIYAAVKGYLDQIPVALITHYEQEL---LKSIDPGLLSA 481

Query: 1531 IREEGQISPQTDAQLKDVVVNFLATF 1608
            I ++  I+ Q  +QL      F  +F
Sbjct: 482  IVQQKNITEQISSQLATFCQKFTQSF 507


>gi|6066186|gb|AAF03204.1| ATP synthase F1 subunit alpha [Nephroselmis
            olivacea]
          Length = 508

 Score =  693 bits (1788), Expect = 0.0
 Identities = 361/505 (71%), Positives = 414/505 (81%)
 Frame = +1

Query: 94   SGSEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMA 273
            S  E+S +LE+RI      +N++E G+VLS+GDGIARVYGL  I+A EMVEF SG++GMA
Sbjct: 4    SAGEISTLLEQRIQNYYMKVNVDEIGRVLSVGDGIARVYGLNKIRAGEMVEFASGVQGMA 63

Query: 274  MNLXXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIAN 453
            +NL               I EGDIVKRTGAIVDVPVG GLLGRVVDALG PIDGKG + +
Sbjct: 64   LNLEYDNVGIVLFGADYLINEGDIVKRTGAIVDVPVGRGLLGRVVDALGKPIDGKGALTD 123

Query: 454  ARRSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTI 633
              R+RVE KAPGII R SV EPM TG+KAVDSLVPIGRGQRELIIGDRQTGKT+IAIDTI
Sbjct: 124  VTRARVETKAPGIIERKSVHEPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTI 183

Query: 634  INQKRFNDAGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQ 813
            INQK  N   D+ KKL+CIYVAVGQKRSTVAQ+V+ L++AGAM YTIVV+ATASDAAPLQ
Sbjct: 184  INQKSVNAGNDESKKLYCIYVAVGQKRSTVAQLVRILSEAGAMSYTIVVAATASDAAPLQ 243

Query: 814  FLAPYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHS 993
            FLAPYS  AMGE+FRDNG HALII+DDLSKQ+VAYRQMSLLLRRPPGREA+PGDVFYLHS
Sbjct: 244  FLAPYSASAMGEYFRDNGMHALIIYDDLSKQSVAYRQMSLLLRRPPGREAFPGDVFYLHS 303

Query: 994  RLLERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRP 1173
            RLLER+ K +++ G GS+T LPVIETQAGDVSAYIPTNVISITDGQIFLETELF KG RP
Sbjct: 304  RLLERSCKRSDATGAGSMTGLPVIETQAGDVSAYIPTNVISITDGQIFLETELFNKGNRP 363

Query: 1174 AINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVR 1353
            AINVGLSVSRVGSAAQ KAMKQVAG++KLELAQYREVAAFAQFGSDLDA+TQ LLNRG R
Sbjct: 364  AINVGLSVSRVGSAAQIKAMKQVAGTLKLELAQYREVAAFAQFGSDLDAATQYLLNRGQR 423

Query: 1354 LTELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQALLKTI 1533
            LTE+LKQG YVP+ +E QV +IY+  +GYLD++  S+I  FE+     ++    A+L+TI
Sbjct: 424  LTEILKQGLYVPIPVELQVVIIYSATRGYLDRIPVSSIASFEQGL---VKEVPPAILETI 480

Query: 1534 REEGQISPQTDAQLKDVVVNFLATF 1608
            R+E  +SP TDA LKD    F+  F
Sbjct: 481  RKERVLSPSTDAALKDFFNKFMTNF 505


>gi|48848346|ref|ZP_00302592.1| COG0056: F0F1-type ATP synthase, alpha
            subunit [Novosphingobium aromaticivorans DSM 12444]
          Length = 509

 Score =  690 bits (1780), Expect = 0.0
 Identities = 351/503 (69%), Positives = 412/503 (81%)
 Frame = +1

Query: 100  SEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMN 279
            +E+SK+++++I    T   + E G VLS+GDGIAR++GL  +QA EMVEF +G+KGMA+N
Sbjct: 6    AEISKVIKDQIASFGTEAQVSEVGSVLSVGDGIARIHGLDKVQAGEMVEFSNGVKGMALN 65

Query: 280  LXXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANAR 459
            L               I+EGD+VKRTG IVDVPVG GLLGRVVDALGNPIDGKGPI +A
Sbjct: 66   LEADNVGVVIFGSDSEIKEGDVVKRTGTIVDVPVGKGLLGRVVDALGNPIDGKGPIVDAT 125

Query: 460  RSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIIN 639
            R RVEVKAPGIIPR SV EP+ TG+KA+D+LVP+GRGQRELIIGDRQTGKTA+AIDT IN
Sbjct: 126  RQRVEVKAPGIIPRKSVHEPVQTGLKAIDALVPVGRGQRELIIGDRQTGKTAVAIDTFIN 185

Query: 640  QKRFNDAGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQFL 819
            QK  N   D+ KKL+CIYVAVGQKRSTVAQIV++L + GAM+Y+IVV+ATAS+ APLQ+L
Sbjct: 186  QKAVNAGTDEGKKLYCIYVAVGQKRSTVAQIVRQLEENGAMEYSIVVAATASEPAPLQYL 245

Query: 820  APYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL 999
            APY+G  MGE FRDNG HA+I++DDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL
Sbjct: 246  APYTGATMGEFFRDNGMHAVIVYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL 305

Query: 1000 LERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPAI 1179
            LERAAKMN+  G GSLTALP+IETQAGDVSAYIPTNVISITDGQIFLET LFY+G+RPAI
Sbjct: 306  LERAAKMNDENGAGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETGLFYQGIRPAI 365

Query: 1180 NVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRLT 1359
            NVGLSVSRVGS+AQTKAMK+VAGS+KLELAQYRE+AAFAQFGSDLDASTQ+LLNRG RLT
Sbjct: 366  NVGLSVSRVGSSAQTKAMKKVAGSIKLELAQYREMAAFAQFGSDLDASTQKLLNRGARLT 425

Query: 1360 ELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQALLKTIRE 1539
            ELLKQ Q+ P+G EEQ  VI+AG +GYLD V  + +T++E E L+ LRS    LL  IR+
Sbjct: 426  ELLKQPQFSPLGFEEQTCVIFAGTQGYLDAVPVNRVTEYEAELLSFLRSQHADLLGLIRD 485

Query: 1540 EGQISPQTDAQLKDVVVNFLATF 1608
               +  +   +L   +  F   F
Sbjct: 486  TKDLGDEAKGKLVAALDAFAKQF 508


>gi|13938339|gb|AAH07299.1| Similar to ATP synthase, H+ transporting,
            mitochondrial F1 complex, alpha subunit, isoform 1,
            cardiac muscle [Homo sapiens]
          Length = 408

 Score =  687 bits (1774), Expect = 0.0
 Identities = 349/407 (85%), Positives = 381/407 (92%)
 Frame = +1

Query: 391  LLGRVVDALGNPIDGKGPIANARRSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRG 570
            LLGRVVDALGN IDGKGPI +  R RV +KAPGIIPR+SVREPM TG+KAVDSLVPIGRG
Sbjct: 1    LLGRVVDALGNAIDGKGPIGSKTRRRVGLKAPGIIPRISVREPMQTGIKAVDSLVPIGRG 60

Query: 571  QRELIIGDRQTGKTAIAIDTIINQKRFNDAGDDKKKLFCIYVAVGQKRSTVAQIVKRLTD 750
            QRELIIGDRQTGKT+IAIDTIINQKRFND  D+KKKL+CIYVA+GQKRSTVAQ+VKRLTD
Sbjct: 61   QRELIIGDRQTGKTSIAIDTIINQKRFNDGSDEKKKLYCIYVAIGQKRSTVAQLVKRLTD 120

Query: 751  AGAMDYTIVVSATASDAAPLQFLAPYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMS 930
            A AM YTIVVSATASDAAPLQ+LAPYSGC+MGE+FRDNGKHALII+DDLSKQAVAYRQMS
Sbjct: 121  ADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNGKHALIIYDDLSKQAVAYRQMS 180

Query: 931  LLLRRPPGREAYPGDVFYLHSRLLERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNV 1110
            LLLRRPPGREAYPGDVFYLHSRLLERAAKMN++ GGGSLTALPVIETQAGDVSAYIPTNV
Sbjct: 181  LLLRRPPGREAYPGDVFYLHSRLLERAAKMNDAFGGGSLTALPVIETQAGDVSAYIPTNV 240

Query: 1111 ISITDGQIFLETELFYKGVRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAA 1290
            ISITDGQIFLETELFYKG+RPAINVGLSVSRVGSAAQT+AMKQVAG+MKLELAQYREVAA
Sbjct: 241  ISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTRAMKQVAGTMKLELAQYREVAA 300

Query: 1291 FAQFGSDLDASTQQLLNRGVRLTELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAIT 1470
            FAQFGSDLDA+TQQLL+RGVRLTELLKQGQY PM IEEQV VIYAGV+GYLDK++PS IT
Sbjct: 301  FAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGVRGYLDKLEPSKIT 360

Query: 1471 KFEKEFLAHLRSSQQALLKTIREEGQISPQTDAQLKDVVVNFLATFK 1611
            KFE  FL+H+ S  QALL TIR +G+IS Q+DA+LK++V NFLA F+
Sbjct: 361  KFENAFLSHVVSQHQALLGTIRADGKISEQSDAKLKEIVTNFLAGFE 407


>gi|13473458|ref|NP_105025.1| ATP synthetase alpha [Mesorhizobium loti
            MAFF303099]
 gi|14024207|dbj|BAB50811.1| ATP synthetase alpha [Mesorhizobium loti]
          Length = 509

 Score =  687 bits (1773), Expect = 0.0
 Identities = 349/503 (69%), Positives = 414/503 (81%)
 Frame = +1

Query: 100  SEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMN 279
            +E+S IL+++I        + E G+VLS+GDGIARVYGL N+QA EMVEF  GI+GMA+N
Sbjct: 6    AEISAILKDQIKNFGREAEVSEVGQVLSVGDGIARVYGLDNVQAGEMVEFPGGIRGMALN 65

Query: 280  LXXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANAR 459
            L               I+EGD VKRTGAIVDVPVG GLLGRVVDALGNPIDGKGPI
Sbjct: 66   LEADNVGVVIFGADRDIKEGDTVKRTGAIVDVPVGPGLLGRVVDALGNPIDGKGPIKATE 125

Query: 460  RSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIIN 639
            R RV+VKAPGIIPR SV EPM TG+KA+D+L+P+GRGQREL+IGDRQTGKTAI +DT++N
Sbjct: 126  RKRVDVKAPGIIPRKSVHEPMSTGLKAIDALIPVGRGQRELVIGDRQTGKTAIILDTMLN 185

Query: 640  QKRFNDAGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQFL 819
            QK  +D G +K+KL+C+YVAVGQKRSTVAQ VK L + GA++Y+I+V+ATASD AP+QFL
Sbjct: 186  QKSVHDNGPEKEKLYCVYVAVGQKRSTVAQFVKVLEERGALEYSIIVAATASDPAPMQFL 245

Query: 820  APYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL 999
            AP++GC MGE+FRDNG HALI +DDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL
Sbjct: 246  APFAGCTMGEYFRDNGMHALISYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL 305

Query: 1000 LERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPAI 1179
            LERAAK+N+ LG GSLTALPVIETQA DVSAYIPTNVISITDGQIFLET LF++G+RPA+
Sbjct: 306  LERAAKLNDDLGNGSLTALPVIETQANDVSAYIPTNVISITDGQIFLETNLFFQGIRPAV 365

Query: 1180 NVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRLT 1359
            NVGLSVSRVGS+AQ KAMKQVAGS+K ELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLT
Sbjct: 366  NVGLSVSRVGSSAQIKAMKQVAGSIKGELAQYREMAAFAQFGSDLDAATQRLLNRGSRLT 425

Query: 1360 ELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQALLKTIRE 1539
            ELLKQ Q+ P+  EEQV VI+AGV GYLDK+  + + KFE   L+H+R++ + +L  IR+
Sbjct: 426  ELLKQPQFSPLKTEEQVAVIFAGVNGYLDKLPVNQVGKFEHGLLSHMRAAGKDVLDAIRK 485

Query: 1540 EGQISPQTDAQLKDVVVNFLATF 1608
            E  +S    A+LK  +  F  TF
Sbjct: 486  EKALSDDLRAKLKAEIDAFAKTF 508


>gi|15966789|ref|NP_387142.1| PROBABLE ATP SYNTHASE ALPHA CHAIN
            PROTEIN [Sinorhizobium meliloti 1021]
 gi|15076061|emb|CAC47615.1| PROBABLE ATP SYNTHASE ALPHA CHAIN PROTEIN
            [Sinorhizobium meliloti]
          Length = 509

 Score =  686 bits (1771), Expect = 0.0
 Identities = 350/503 (69%), Positives = 415/503 (81%)
 Frame = +1

Query: 100  SEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMN 279
            +E+S IL+++I        + E G+VLS+GDGIARVYGL N+QA EMVEF  GI+GMA+N
Sbjct: 6    AEISAILKDQIKNFGQEAEVSEVGQVLSVGDGIARVYGLDNVQAGEMVEFPGGIRGMALN 65

Query: 280  LXXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANAR 459
            L               I+EGD VKRTGAIVDVPVG  LLGRVVDALGNPIDGKGPI   +
Sbjct: 66   LEADNVGVVIFGSDRDIKEGDTVKRTGAIVDVPVGPELLGRVVDALGNPIDGKGPINAKQ 125

Query: 460  RSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIIN 639
            R+RV+VKAPGIIPR SV EPM TG+KA+D+L+P+GRGQREL+IGDRQTGKTAI +DTI+N
Sbjct: 126  RARVDVKAPGIIPRKSVHEPMSTGLKAIDALIPVGRGQRELVIGDRQTGKTAIILDTILN 185

Query: 640  QKRFNDAGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQFL 819
            QK  +D G +  KL+C+YVA+GQKRSTVAQ VK L + GA+ Y+I+V+ATASD AP+Q+L
Sbjct: 186  QKAIHDNGPEGDKLYCVYVAIGQKRSTVAQFVKVLEERGALQYSIIVAATASDPAPMQYL 245

Query: 820  APYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL 999
            AP++GCAMGE+FRDNGKHALI +DDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL
Sbjct: 246  APFAGCAMGEYFRDNGKHALIGYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL 305

Query: 1000 LERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPAI 1179
            LERAAK+++  G GSLTALPVIETQ  DVSA+IPTNVISITDGQIFLET+LFY+G+RPA+
Sbjct: 306  LERAAKLSDERGAGSLTALPVIETQGNDVSAFIPTNVISITDGQIFLETDLFYQGIRPAV 365

Query: 1180 NVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRLT 1359
            NVGLSVSRVGS+AQ KAMKQVAGS+K ELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLT
Sbjct: 366  NVGLSVSRVGSSAQIKAMKQVAGSIKGELAQYREMAAFAQFGSDLDAATQRLLNRGARLT 425

Query: 1360 ELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQALLKTIRE 1539
            ELLKQ Q+ P+  EEQV VI+AGV GYLDK+  S + KFE   L++LRS  +A+L TIR
Sbjct: 426  ELLKQPQFSPLKTEEQVAVIFAGVNGYLDKLPVSDVGKFEHGLLSYLRSEGKAVLDTIRT 485

Query: 1540 EGQISPQTDAQLKDVVVNFLATF 1608
            E  IS  T A+LK  + +F  +F
Sbjct: 486  EKAISDDTKAKLKGAIDSFAKSF 508


>gi|171116|gb|AAA66888.1| ATPase 1 alpha subunit
          Length = 544

 Score =  686 bits (1769), Expect = 0.0
 Identities = 356/535 (66%), Positives = 425/535 (78%)
 Frame = +1

Query: 4    LSKRIVTALNTAVKVQNAGIATTARGMAGASGSEVSKILEERILGTETGINLEETGKVLS 183
            LS+ ++ +   A     A  +T       A  +EVS ILEERI G     NL ETG+VL+
Sbjct: 11   LSRTLINSTKAARPAAAALASTRRLASTKAQPTEVSSILEERIKGVSDEANLNETGRVLA 70

Query: 184  IGDGIARVYGLKNIQAEEMVEFDSGIKGMAMNLXXXXXXXXXXXXXXXIREGDIVKRTGA 363
            +GDGIARV+GL NIQAEE+VEF SG+KGMA+NL               ++EG++VKRTG
Sbjct: 71   VGDGIARVFGLNNIQAEELVEFSSGVKGMALNLEPGQVGIVLFGSDRLVKEGELVKRTGN 130

Query: 364  IVDVPVGDGLLGRVVDALGNPIDGKGPIANARRSRVEVKAPGIIPRLSVREPMVTGVKAV 543
            IVDVPVG GLLGRVVDALGNPIDGKGPI  A RSR +VKAPGI+PR SV EP+ TG+KAV
Sbjct: 131  IVDVPVGPGLLGRVVDALGNPIDGKGPIDAAGRSRAQVKAPGILPRRSVHEPVQTGLKAV 190

Query: 544  DSLVPIGRGQRELIIGDRQTGKTAIAIDTIINQKRFNDAGDDKKKLFCIYVAVGQKRSTV 723
            D+LVPIGRGQRELIIGDRQTGKTA+A+DTI+NQKR+N+  D+ KKL+C+YVAVGQKRSTV
Sbjct: 191  DALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNNGSDESKKLYCVYVAVGQKRSTV 250

Query: 724  AQIVKRLTDAGAMDYTIVVSATASDAAPLQFLAPYSGCAMGEHFRDNGKHALIIFDDLSK 903
            AQ+V+ L    AM Y+I+V+ATAS+AAPLQ+LAP++  ++GE FRDNGKHALI++DDLSK
Sbjct: 251  AQLVQTLEQHDAMKYSIIVAATASEAAPLQYLAPFTAASIGEWFRDNGKHALIVYDDLSK 310

Query: 904  QAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNNSLGGGSLTALPVIETQAGD 1083
             ++AYRQ+SL+LRRPPGREAYPGDVFYLHSRLLERAAK++   G GSLTALPVIETQ GD
Sbjct: 311  ASLAYRQLSLMLRRPPGREAYPGDVFYLHSRLLERAAKLSEKEGSGSLTALPVIETQGGD 370

Query: 1084 VSAYIPTNVISITDGQIFLETELFYKGVRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLE 1263
            VSAYIPTNVISITD QIFLE ELFYKG+RPAINVGLSVSRVGSAAQ KA+KQVAGS+KL
Sbjct: 371  VSAYIPTNVISITDAQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVKALKQVAGSLKLF 430

Query: 1264 LAQYREVAAFAQFGSDLDASTQQLLNRGVRLTELLKQGQYVPMGIEEQVGVIYAGVKGYL 1443
            LAQYREVAAFAQFGSDLDAST+Q L RG RLT+LLKQ QY P+  EEQ  +I AGV G+
Sbjct: 431  LAQYREVAAFAQFGSDLDASTKQTLVRGQRLTQLLKQNQYSPLATEEQ-SMIIAGVNGHS 489

Query: 1444 DKVDPSAITKFEKEFLAHLRSSQQALLKTIREEGQISPQTDAQLKDVVVNFLATF 1608
               + S I +FE  FL++L+S+   LL  IRE+G++S +  A LK    +F+ATF
Sbjct: 490  GWYELSRIGEFESSFLSYLKSNHNELLTEIREKGELSKELLASLKSATESFVATF 544


>gi|22550331|ref|NP_689366.1| ATP synthase F1 subunit alpha
            [Chaetosphaeridium globosum]
 gi|22416997|gb|AAM96596.1| ATP synthase F1 subunit alpha
            [Chaetosphaeridium globosum]
          Length = 508

 Score =  684 bits (1766), Expect = 0.0
 Identities = 356/506 (70%), Positives = 415/506 (81%), Gaps = 1/506 (0%)
 Frame = +1

Query: 94   SGSEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMA 273
            + +E+S +LE RI    T   ++E G+V+S+GDGIARVYGL  IQA EMVEF SG+KGMA
Sbjct: 2    NAAELSSLLESRITNYYTKFQVDEVGRVVSVGDGIARVYGLNKIQAGEMVEFASGVKGMA 61

Query: 274  MNLXXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIAN 453
            +NL               I+EGDIVKRTG+IVDVPVG  LLGRVVDALG PIDGKGP+ +
Sbjct: 62   LNLENENVGIVVFGNDTAIKEGDIVKRTGSIVDVPVGKELLGRVVDALGVPIDGKGPLGH 121

Query: 454  ARRSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTI 633
            + R RVEVKAPGII R SV EPM TG+KAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTI
Sbjct: 122  SSRIRVEVKAPGIISRKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTI 181

Query: 634  INQKRFN-DAGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPL 810
            +NQK+ N  A  +K KL+C+YVA+GQKRSTVAQ+VK L++AGA++Y+I+V+ATASD APL
Sbjct: 182  LNQKQLNASATSEKDKLYCVYVAIGQKRSTVAQLVKSLSEAGALEYSIIVAATASDPAPL 241

Query: 811  QFLAPYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLH 990
            QFLAPYSGCAM E+FRDNG HALI++DDLSKQ+VAYRQM LLLRRPPGREA+PGDVFYLH
Sbjct: 242  QFLAPYSGCAMAEYFRDNGMHALIVYDDLSKQSVAYRQMCLLLRRPPGREAFPGDVFYLH 301

Query: 991  SRLLERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVR 1170
            SRLLERAAKM+N  G GS+TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFY+G+R
Sbjct: 302  SRLLERAAKMSNDKGAGSMTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYRGIR 361

Query: 1171 PAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGV 1350
            PAINVGLSVSRVGSAAQ KAMKQV GS+KLELAQYREVAAFAQFGSDLDASTQ LLNRG
Sbjct: 362  PAINVGLSVSRVGSAAQMKAMKQVCGSLKLELAQYREVAAFAQFGSDLDASTQYLLNRGA 421

Query: 1351 RLTELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQALLKT 1530
            RLTE+LKQ QY P+ IE+Q+ VI+A VKGYLD +  S+I ++E++    L++    LL
Sbjct: 422  RLTEVLKQAQYSPLPIEKQIVVIFAAVKGYLDSIAISSIGEYEQQL---LKAVPVELLSA 478

Query: 1531 IREEGQISPQTDAQLKDVVVNFLATF 1608
            I +E  ++    A+L +    F A F
Sbjct: 479  ILKEKNMTETISAELANFCSTFTANF 504


>gi|2147140|pir||S62702 H+-transporting two-sector ATPase (EC
            3.6.3.14) alpha chain - Platymonas subcordiformis
            mitochondrion
 gi|633585|emb|CAA87749.1| ATPase alpha subunit [Platymonas
            subcordiformis]
          Length = 469

 Score =  683 bits (1763), Expect = 0.0
 Identities = 351/460 (76%), Positives = 389/460 (84%)
 Frame = +1

Query: 103  EVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMNL 282
            E+S +LE+++   +   + EE GKVLSIGDGIARVYGL  IQA EMVEF SGIKGMA+NL
Sbjct: 9    ELSSLLEQKMTEKQFNFSYEEVGKVLSIGDGIARVYGLNKIQAGEMVEFQSGIKGMALNL 68

Query: 283  XXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANARR 462
                           I EGDIVKRT  IVDVPVG G LGRV+DALGNPIDGKGP+ N  R
Sbjct: 69   ENDNVGVVVFGSDTSINEGDIVKRTNTIVDVPVGKGTLGRVMDALGNPIDGKGPLTNVTR 128

Query: 463  SRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIINQ 642
             RVEVKAPGII R SV EPM TG+KAVDSLVPIGRGQRELIIGDRQTGKT IAIDTIINQ
Sbjct: 129  QRVEVKAPGIISRKSVHEPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTRIAIDTIINQ 188

Query: 643  KRFNDAGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQFLA 822
            +  N+  D+ KKL+C+YVAVGQKRSTVAQ+VK L + GA+ Y+I+V+ATASD APLQFLA
Sbjct: 189  QGVNEGTDESKKLYCVYVAVGQKRSTVAQLVKILEERGALKYSIIVAATASDPAPLQFLA 248

Query: 823  PYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLL 1002
            PYSGCAMGE+FRDNG HALII+DD+SKQ+VAYRQMSLLLRRPPGREA+PGDVFYLHSRLL
Sbjct: 249  PYSGCAMGEYFRDNGMHALIIYDDVSKQSVAYRQMSLLLRRPPGREAFPGDVFYLHSRLL 308

Query: 1003 ERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPAIN 1182
            ERAAKM++  G GSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKG+RPAIN
Sbjct: 309  ERAAKMSDDTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAIN 368

Query: 1183 VGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRLTE 1362
            VGLSVSRVGSAAQ KAMKQVAG+MKLELAQYREVAAFAQFGSDLDASTQ LLNRG RLTE
Sbjct: 369  VGLSVSRVGSAAQVKAMKQVAGTMKLELAQYREVAAFAQFGSDLDASTQYLLNRGARLTE 428

Query: 1363 LLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEK 1482
            +LKQG + PM IE QV ++YA  KGYLDK++   I  FE+
Sbjct: 429  VLKQGLFQPMPIENQVVLLYAATKGYLDKLEIKDIASFEE 468


>gi|45916916|ref|ZP_00197680.1| COG0056: F0F1-type ATP synthase, alpha
            subunit [Mesorhizobium sp. BNC1]
          Length = 509

 Score =  682 bits (1760), Expect = 0.0
 Identities = 352/503 (69%), Positives = 408/503 (80%)
 Frame = +1

Query: 100  SEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMN 279
            +E+S IL+++I        + E G+VLS+GDGIARVYGL N+QA EMVEF  GI+GMA+N
Sbjct: 6    AEISAILKDQIKNFGKEAEVSEVGQVLSVGDGIARVYGLDNVQAGEMVEFPGGIRGMALN 65

Query: 280  LXXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANAR 459
            L               I+EGD VKRTGAIV+VPVG GLLGRVVDALGNPIDGKGPI
Sbjct: 66   LEVDNVGVVIFGADRDIKEGDTVKRTGAIVEVPVGPGLLGRVVDALGNPIDGKGPIQATE 125

Query: 460  RSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIIN 639
            R RV+VKAPGIIPR SV EPM TG+KA+D+L+PIGRGQRELIIGDRQTGKTAI +DT +N
Sbjct: 126  RRRVDVKAPGIIPRKSVHEPMSTGLKAIDALIPIGRGQRELIIGDRQTGKTAIILDTFLN 185

Query: 640  QKRFNDAGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQFL 819
            QK  ND  D+ +KL+CIYVAVGQKRSTVAQ VK L + GA++Y+IVV+ATASD AP+QFL
Sbjct: 186  QKPLNDGDDESQKLYCIYVAVGQKRSTVAQFVKVLEERGALEYSIVVAATASDPAPMQFL 245

Query: 820  APYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL 999
            AP++GCAMGE+FRDNGKHA+I +DDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL
Sbjct: 246  APFAGCAMGEYFRDNGKHAVIAYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL 305

Query: 1000 LERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPAI 1179
            LERAAKMN+  G GSLTALPVIETQA DVSAYIPTNVISITDGQIFLET LF++GVRPA+
Sbjct: 306  LERAAKMNDDNGSGSLTALPVIETQANDVSAYIPTNVISITDGQIFLETNLFFQGVRPAV 365

Query: 1180 NVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRLT 1359
            NVGLSVSRVGSAAQ KAMKQVAGS+K ELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLT
Sbjct: 366  NVGLSVSRVGSAAQVKAMKQVAGSIKGELAQYREMAAFAQFGSDLDAATQRLLNRGARLT 425

Query: 1360 ELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQALLKTIRE 1539
            ELLKQ Q+ P+  EEQV VI+AGV GYLD +    + +FE+  L H+RS  + +L  IR
Sbjct: 426  ELLKQPQFSPLKTEEQVVVIFAGVNGYLDALALRDVGRFEQGLLTHMRSEGKEILDAIRV 485

Query: 1540 EGQISPQTDAQLKDVVVNFLATF 1608
            E  +S    A+LK  +  +   F
Sbjct: 486  EKALSDDLRAKLKAEIDAYAKNF 508


>gi|23502654|ref|NP_698781.1| ATP synthase F1, alpha subunit [Brucella
            suis 1330]
 gi|23348662|gb|AAN30696.1| ATP synthase F1, alpha subunit [Brucella
            suis 1330]
          Length = 509

 Score =  681 bits (1756), Expect = 0.0
 Identities = 348/503 (69%), Positives = 411/503 (81%)
 Frame = +1

Query: 100  SEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMN 279
            +E+S IL+E+I        + E G+VLS+GDGIARVYGL N+QA EMVEF  GI+GMA+N
Sbjct: 6    AEISAILKEQIKNFGKEAEVSEVGQVLSVGDGIARVYGLDNVQAGEMVEFPGGIRGMALN 65

Query: 280  LXXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANAR 459
            L               I+EGD+VKRTGAIVDVPVG  LLGRVVDALGNPIDGKGPI
Sbjct: 66   LESDNVGVVIFGADRDIKEGDVVKRTGAIVDVPVGPELLGRVVDALGNPIDGKGPIKAKE 125

Query: 460  RSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIIN 639
            R RV+VKAPGIIPR SV EPM TG+KA+D+L+P+GRGQREL+IGDRQTGKTAI +DT +N
Sbjct: 126  RRRVDVKAPGIIPRKSVHEPMSTGLKAIDALIPVGRGQRELVIGDRQTGKTAIILDTFLN 185

Query: 640  QKRFNDAGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQFL 819
            QK  +D G DK KL+C+YVAVGQKRSTVAQ VK L + GA++Y+IVV+ATASD AP+Q+L
Sbjct: 186  QKPIHDNGPDKDKLYCVYVAVGQKRSTVAQFVKVLEERGALEYSIVVAATASDPAPMQYL 245

Query: 820  APYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL 999
            AP++GCAMGE+FRDNG+HALI +DDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL
Sbjct: 246  APFAGCAMGEYFRDNGQHALIGYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL 305

Query: 1000 LERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPAI 1179
            LERAAK+N+  G GSLTALPVIETQ  DVSA+IPTNVISITDGQIFLET LFY+G+RPA+
Sbjct: 306  LERAAKLNDENGAGSLTALPVIETQGNDVSAFIPTNVISITDGQIFLETNLFYQGIRPAV 365

Query: 1180 NVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRLT 1359
            NVGLSVSRVGS+AQ KAMKQVAGS+K ELAQ+RE+AAFAQFGSDLDA+TQ+LLNRG RLT
Sbjct: 366  NVGLSVSRVGSSAQIKAMKQVAGSIKGELAQHREMAAFAQFGSDLDAATQRLLNRGARLT 425

Query: 1360 ELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQALLKTIRE 1539
            ELLKQ Q+ P+  EEQV VIYAGV GYLDK+  + + KFE+  LA LR+  + +L+ IR
Sbjct: 426  ELLKQPQFSPLKTEEQVAVIYAGVNGYLDKLAVNQVGKFEEGLLASLRTEHKDVLEGIRN 485

Query: 1540 EGQISPQTDAQLKDVVVNFLATF 1608
            E  ++    A+LK  +  F  +F
Sbjct: 486  EKALTDDLKAKLKAAIDAFAKSF 508


>gi|17986533|ref|NP_539167.1| ATP SYNTHASE ALPHA CHAIN [Brucella
            melitensis 16M]
 gi|25290475|pir||AD3283 H+-transporting two-sector ATPase (EC
            3.6.3.14) [imported] - Brucella melitensis (strain 16M)
 gi|17982138|gb|AAL51431.1| ATP SYNTHASE ALPHA CHAIN [Brucella
            melitensis 16M]
          Length = 509

 Score =  679 bits (1753), Expect = 0.0
 Identities = 348/503 (69%), Positives = 410/503 (81%)
 Frame = +1

Query: 100  SEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMN 279
            +E+S IL+E+I        + E G+VLS+GDGIARVYGL N+QA EMVEF  GI+GMA+N
Sbjct: 6    AEISAILKEQIKNFGKEAEVSEVGQVLSVGDGIARVYGLDNVQAGEMVEFPGGIRGMALN 65

Query: 280  LXXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANAR 459
            L               I+EGD+VKRTGAIVDVPVG  LLGRVVDALGNPIDGKGPI
Sbjct: 66   LESDNVGVVIFGADRDIKEGDVVKRTGAIVDVPVGPELLGRVVDALGNPIDGKGPIKAKE 125

Query: 460  RSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIIN 639
            R RV+VKAPGIIPR SV EPM TG+KA+D+L+P+GRGQREL+IGDRQTGKTAI +DT +N
Sbjct: 126  RRRVDVKAPGIIPRKSVHEPMSTGLKAIDALIPVGRGQRELVIGDRQTGKTAIILDTFLN 185

Query: 640  QKRFNDAGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQFL 819
            QK  +D G DK KL+C+YVAVGQKRSTVAQ VK L + GA++Y+IVV+ATASD AP+Q+L
Sbjct: 186  QKPIHDNGPDKDKLYCVYVAVGQKRSTVAQFVKVLEERGALEYSIVVAATASDPAPMQYL 245

Query: 820  APYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL 999
            AP++GCAMGE+FRDNG+HALI +DDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL
Sbjct: 246  APFAGCAMGEYFRDNGQHALIGYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL 305

Query: 1000 LERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPAI 1179
            LERAAK+N+  G GSLTALPVIETQ  DVSA+IPTNVISITDGQIFLET LFY+G+RPA+
Sbjct: 306  LERAAKLNDENGAGSLTALPVIETQGNDVSAFIPTNVISITDGQIFLETNLFYQGIRPAV 365

Query: 1180 NVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRLT 1359
            NVGLSVSRVGS+AQ KAMKQVAGS+K ELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLT
Sbjct: 366  NVGLSVSRVGSSAQIKAMKQVAGSIKGELAQYREMAAFAQFGSDLDAATQRLLNRGARLT 425

Query: 1360 ELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQALLKTIRE 1539
            ELLKQ Q+ P+  EEQV VIYAGV GYLDK+  + + KFE+  LA LR+  + +L+ I
Sbjct: 426  ELLKQPQFSPLKTEEQVAVIYAGVNGYLDKLAVNQVGKFEEGLLASLRTEHKDVLEGICN 485

Query: 1540 EGQISPQTDAQLKDVVVNFLATF 1608
            E  ++    A+LK  +  F  +F
Sbjct: 486  EKALTDDLKAKLKAAIDAFAKSF 508


>gi|48764967|ref|ZP_00269518.1| COG0056: F0F1-type ATP synthase, alpha
            subunit [Rhodospirillum rubrum]
 gi|114525|sp|P05036|ATPA_RHORU ATP synthase alpha chain
 gi|67815|pir||PWQFA H+-transporting two-sector ATPase (EC 3.6.3.14)
            alpha chain - Rhodospirillum rubrum
 gi|46366|emb|CAA26338.1| unnamed protein product [Rhodospirillum
            rubrum]
          Length = 510

 Score =  678 bits (1750), Expect = 0.0
 Identities = 350/504 (69%), Positives = 408/504 (80%), Gaps = 1/504 (0%)
 Frame = +1

Query: 100  SEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMN 279
            +E+S IL+E+I    T     E G+VLS+GDGIARVYGL N+QA EMVEF +G+KGMA+N
Sbjct: 6    AEISAILKEQIANFGTEAESAEVGQVLSVGDGIARVYGLDNVQAGEMVEFANGVKGMALN 65

Query: 280  LXXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANAR 459
            L               I+EGD+VKRT  IVDVPVG GLLGRVVD LGNPIDGKG + +
Sbjct: 66   LESDNVGIVIFGEDRGIKEGDVVKRTQTIVDVPVGKGLLGRVVDGLGNPIDGKGDLVDVE 125

Query: 460  RSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIIN 639
            R R EVKAPGIIPR SV EP+ TG+KA+DSL+PIGRGQRELIIGDRQTGKTA+ +DTI+N
Sbjct: 126  RKRAEVKAPGIIPRKSVHEPVQTGIKAIDSLIPIGRGQRELIIGDRQTGKTAVILDTILN 185

Query: 640  QKRFND-AGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQF 816
            QK  ND A DD +KLFC+YVAVGQKRSTVAQ+VK L D GA+DYTIVV+ATAS+ APLQF
Sbjct: 186  QKAVNDKAKDDSEKLFCVYVAVGQKRSTVAQVVKVLADHGALDYTIVVAATASEPAPLQF 245

Query: 817  LAPYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSR 996
            LAPY+GC MGE FRDNG HA+I +DDL+KQAVAYRQMSLLLRRPPGREA+PGDVFYLHSR
Sbjct: 246  LAPYTGCTMGEFFRDNGMHAVIFYDDLTKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSR 305

Query: 997  LLERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPA 1176
            LLERAAK+N+  G GSLTALPVIETQA DVSAYIPTNVISITDGQIFLET+LF+KG+RPA
Sbjct: 306  LLERAAKLNDDNGAGSLTALPVIETQANDVSAYIPTNVISITDGQIFLETDLFFKGIRPA 365

Query: 1177 INVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRL 1356
            +NVGLSVSRVGS+AQ KAMKQVAGS+KLELAQYRE+AAFAQF SDLD +TQ+LL RG RL
Sbjct: 366  VNVGLSVSRVGSSAQIKAMKQVAGSIKLELAQYREMAAFAQFASDLDPATQKLLARGARL 425

Query: 1357 TELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQALLKTIR 1536
            TELLKQ QY P+ +EEQV VIYAG +GYLDK+  + + ++E   L  LR+S   LL++IR
Sbjct: 426  TELLKQAQYSPLAVEEQVCVIYAGTRGYLDKLKTTDVVRYEASLLGALRTSGADLLESIR 485

Query: 1537 EEGQISPQTDAQLKDVVVNFLATF 1608
                +S + + +L    V FL  F
Sbjct: 486  TGKALSKEIEQKL----VKFLDDF 505


>gi|11466576|ref|NP_066466.1| ATP synthase F1 subunit alpha
            [Rhodomonas salina]
 gi|10444163|gb|AAG17737.1| ATP synthase F1 subunit alpha [Rhodomonas
            salina]
          Length = 510

 Score =  674 bits (1739), Expect = 0.0
 Identities = 346/507 (68%), Positives = 414/507 (81%), Gaps = 1/507 (0%)
 Frame = +1

Query: 94   SGSEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEF-DSGIKGM 270
            S  E++ I+E R+    T + ++ETG VLS+GDGIARV+GLK IQA EM  F  + I GM
Sbjct: 4    SAIELTAIIENRLKNYYTNVKIDETGFVLSVGDGIARVFGLKGIQAGEMCRFAQANIFGM 63

Query: 271  AMNLXXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIA 450
            A+NL               I+EGD V+R+  IV+VPVG  LLGRVVD LG PIDG G I
Sbjct: 64   ALNLEQDNVGIVIFGNDRKIKEGDTVERSNFIVEVPVGRELLGRVVDGLGMPIDGLGEIK 123

Query: 451  NARRSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDT 630
              ++SRVE+KAPGIIPR SV EPM TG+K VD LVPIGRGQRELIIGDRQTGKTA+AIDT
Sbjct: 124  AEKKSRVEIKAPGIIPRKSVNEPMQTGLKVVDGLVPIGRGQRELIIGDRQTGKTAVAIDT 183

Query: 631  IINQKRFNDAGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPL 810
            IINQK  +++ D+  KL+CIYVAVGQKRSTVAQ+ K L  + AM YTI+V+ATASD+APL
Sbjct: 184  IINQKSIHESNDESNKLYCIYVAVGQKRSTVAQVSKILKSSNAMGYTIIVAATASDSAPL 243

Query: 811  QFLAPYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLH 990
            QFLAPY+GC +GE FRDNG HAL+I+DDLSKQAVAYRQMSLLLRRPPGREA+PGDVFYLH
Sbjct: 244  QFLAPYTGCTIGEFFRDNGSHALVIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLH 303

Query: 991  SRLLERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVR 1170
            SRLLERAAK+N   G GSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELF+KG+R
Sbjct: 304  SRLLERAAKLNADFGSGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFFKGIR 363

Query: 1171 PAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGV 1350
            PA+NVGLSVSRVGSAAQ KA+KQVAG++KLELAQYREVAAFAQFGSDLDA+TQ LLNRG
Sbjct: 364  PALNVGLSVSRVGSAAQIKAIKQVAGTLKLELAQYREVAAFAQFGSDLDAATQHLLNRGS 423

Query: 1351 RLTELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQALLKT 1530
            +LTELLKQ Q+ P+ IE+QV V++ GV+GYLDK++ + I +FE EFL+ L +   ++L+T
Sbjct: 424  KLTELLKQNQFSPLTIEQQVCVLFTGVRGYLDKLEINQIGRFEVEFLSALDTKGSSILQT 483

Query: 1531 IREEGQISPQTDAQLKDVVVNFLATFK 1611
            ++ +  IS +T+ +LKD +V FL++FK
Sbjct: 484  VKTDKVISDETETKLKDFIVEFLSSFK 510


>gi|11466531|ref|NP_044780.1| ATP synthase F1 subunit alpha
            [Reclinomonas americana]
 gi|7436077|pir||S78162 H+-transporting two-sector ATPase (EC
            3.6.3.14) alpha chain - Reclinomonas americana (ATCC
            50394) mitochondrion
 gi|2258361|gb|AAD11895.1| ATP synthase F1 subunit alpha [Reclinomonas
            americana]
          Length = 512

 Score =  672 bits (1734), Expect = 0.0
 Identities = 349/508 (68%), Positives = 413/508 (80%), Gaps = 2/508 (0%)
 Frame = +1

Query: 91   ASGSEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFD-SGIKG 267
            ++ SE  KILEERI      +++EE G+V+SIGDGIARVYGL N+QA EMVEF  +GIKG
Sbjct: 3    STASEQFKILEERITNAYRELDVEEIGRVISIGDGIARVYGLNNVQAGEMVEFPKAGIKG 62

Query: 268  MAMNLXXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPI 447
            MA+NL               I EGDIV+RTGAIVDVPVG GLLGRVVDALGNPIDGKGPI
Sbjct: 63   MALNLETDNVGIVLFGNDRAIAEGDIVRRTGAIVDVPVGKGLLGRVVDALGNPIDGKGPI 122

Query: 448  ANARRSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAID 627
                R RVEVKAPGI+ R SV EPM TG+KA+D LVPIGRGQRELIIGDRQTGKTAIA+D
Sbjct: 123  QTTERRRVEVKAPGILSRKSVHEPMSTGIKAIDCLVPIGRGQRELIIGDRQTGKTAIALD 182

Query: 628  TIINQKRFNDAGD-DKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAA 804
            T++NQK  N++   + +KL+ IYVA+GQKRSTVAQ+V+ L +  A+ YTI+V++TAS+ A
Sbjct: 183  TMLNQKLINESTQKESEKLYSIYVAIGQKRSTVAQLVQTLEEYDALKYTIIVASTASEPA 242

Query: 805  PLQFLAPYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFY 984
            PLQFLAPYSGCA+GE FRDNG H LII+DDLSKQAVAYRQ SLLLRRPPGREAYPGDVFY
Sbjct: 243  PLQFLAPYSGCAIGEFFRDNGMHGLIIYDDLSKQAVAYRQTSLLLRRPPGREAYPGDVFY 302

Query: 985  LHSRLLERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKG 1164
            LHSRLLERAAKM++  G GSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFY G
Sbjct: 303  LHSRLLERAAKMSDKDGAGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYSG 362

Query: 1165 VRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNR 1344
            +RPA++VGLSVSRVGSAAQ KAMKQV G++KL+LAQYREVAAFAQFGSDLDA+T   LNR
Sbjct: 363  LRPAVSVGLSVSRVGSAAQIKAMKQVGGTLKLDLAQYREVAAFAQFGSDLDAATLSQLNR 422

Query: 1345 GVRLTELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQALL 1524
            G RLTELLKQ QY P+  E Q+ ++YAGV+GYL+K+  S I ++EK  +  ++++   +L
Sbjct: 423  GERLTELLKQAQYSPIPTEIQIVILYAGVRGYLNKISVSKIGEYEKGLINFIQTNHADIL 482

Query: 1525 KTIREEGQISPQTDAQLKDVVVNFLATF 1608
            K I++E Q+S   DAQ+ ++V  F  +F
Sbjct: 483  KRIKDERQLSKDLDAQIGNIVSTFTNSF 510


>gi|2493020|sp|P72245|ATPA_RHOCA ATP synthase alpha chain
 gi|1524322|emb|CAA67908.1| FoF1 ATP synthase [Rhodobacter capsulatus]
          Length = 509

 Score =  668 bits (1723), Expect = 0.0
 Identities = 343/508 (67%), Positives = 405/508 (79%), Gaps = 1/508 (0%)
 Frame = +1

Query: 88   GASGSEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKG 267
            G   +E+S IL+E+I        + E G+VLS+GDGIARV+GL N+QA EMVEF  GI+G
Sbjct: 2    GIQAAEISAILKEQIKNFGQDAQVAEVGRVLSVGDGIARVHGLDNVQAGEMVEFPGGIRG 61

Query: 268  MAMNLXXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPI 447
            MA+NL               I+EGD VKRT AIVDVP G+GLLGRVVD LGNPIDGKGPI
Sbjct: 62   MALNLEVDNVGIVIFGSDRDIKEGDTVKRTNAIVDVPAGEGLLGRVVDGLGNPIDGKGPI 121

Query: 448  ANARRSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAID 627
                R   +VKAPGIIPR SV EPM TG+K+VD+++PIGRGQRELIIGDRQTGKTAIA+D
Sbjct: 122  VAKERRIADVKAPGIIPRKSVHEPMATGLKSVDAMIPIGRGQRELIIGDRQTGKTAIALD 181

Query: 628  TIINQKRFNDAGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAP 807
            TI+NQK +NDA    K L C YVA+GQKRSTVAQ+VK+L +AGAM+YT VV+ATASD AP
Sbjct: 182  TILNQKSYNDANPGNK-LHCFYVAIGQKRSTVAQLVKKLEEAGAMEYTTVVAATASDPAP 240

Query: 808  LQFLAPYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYL 987
            +QFLAPYS  AM E+FRDNG HALII+DDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYL
Sbjct: 241  MQFLAPYSATAMAEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYL 300

Query: 988  HSRLLERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGV 1167
            HSRLLER+AK+N   G GSLTALPVIETQ GDVSA+IPTNVISITDGQIFLETELFY+G+
Sbjct: 301  HSRLLERSAKLNEDFGSGSLTALPVIETQGGDVSAFIPTNVISITDGQIFLETELFYQGI 360

Query: 1168 RPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRG 1347
            RPA+N GLSVSRVGS+AQT +MK VAG +KLELAQYRE+AAFAQFGSDLDA+TQ+LLNRG
Sbjct: 361  RPAVNTGLSVSRVGSSAQTNSMKSVAGPVKLELAQYREMAAFAQFGSDLDAATQKLLNRG 420

Query: 1348 VRLTELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQALLK 1527
             RLTEL+KQ QY P+   E V VI+AG  G+LD V    + +FEK  LA+LRS+++ +L+
Sbjct: 421  ARLTELMKQPQYSPLTNAEIVAVIFAGTNGFLDAVPVKEVGRFEKGLLAYLRSTRKDVLE 480

Query: 1528 TI-REEGQISPQTDAQLKDVVVNFLATF 1608
             + +E+ +I    + +LKD +  F  TF
Sbjct: 481  WLTKEDPKIKGDAEKKLKDAIAEFAKTF 508


>gi|49474712|ref|YP_032754.1| ATP synthase alpha chain [Bartonella
            quintana]
 gi|49240216|emb|CAF26684.1| ATP synthase alpha chain [Bartonella
            quintana str. Toulouse]
          Length = 511

 Score =  666 bits (1719), Expect = 0.0
 Identities = 349/505 (69%), Positives = 408/505 (80%), Gaps = 2/505 (0%)
 Frame = +1

Query: 100  SEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMN 279
            SE+SKIL+E+I   +    + E G VLS+GDGIARVYGL NIQA EMV F +G+ GMA+N
Sbjct: 6    SEISKILKEQIRDFDQKAEVSEIGWVLSVGDGIARVYGLDNIQAGEMVSFSNGVHGMALN 65

Query: 280  LXXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANAR 459
            L               IREGD VKR GAIVDVPVG  LLGRVVDALGNPIDGKGP+
Sbjct: 66   LEIDNVGVVIFGSDRDIREGDSVKRLGAIVDVPVGPALLGRVVDALGNPIDGKGPLKATE 125

Query: 460  RSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIIN 639
            R RV+VKAPGIIPR SV EPM TG+KA+D+L+PIGRGQREL+IGDRQTGKTAI +DT +N
Sbjct: 126  RRRVDVKAPGIIPRQSVHEPMPTGLKAIDALIPIGRGQRELVIGDRQTGKTAILLDTFLN 185

Query: 640  QKRFND--AGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQ 813
            QK F++  AG+++ K++CIYVA+GQKRSTVAQ VK L + GA++Y+I+V+ATASD AP+Q
Sbjct: 186  QKPFHEKGAGNEQDKVYCIYVAIGQKRSTVAQFVKVLEERGALEYSIIVAATASDPAPMQ 245

Query: 814  FLAPYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHS 993
            F+AP +GCAMGE+FRDNG+HALI +DDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHS
Sbjct: 246  FIAPLAGCAMGEYFRDNGQHALIGYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHS 305

Query: 994  RLLERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRP 1173
            RLLERAAK+N   G GSLTALPVIETQA DVSAYIPTNVISITDGQIFLET LFY+G+RP
Sbjct: 306  RLLERAAKLNAENGSGSLTALPVIETQANDVSAYIPTNVISITDGQIFLETNLFYQGIRP 365

Query: 1174 AINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVR 1353
            A+NVGLSVSRVGSAAQ KAMKQVAGS+K ELAQYRE+AAFAQFGSDLDASTQ+LLNRG R
Sbjct: 366  AVNVGLSVSRVGSAAQIKAMKQVAGSIKGELAQYREMAAFAQFGSDLDASTQRLLNRGAR 425

Query: 1354 LTELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQALLKTI 1533
            LTELLKQ Q+ P+  EEQV VI+AGV GYLD +  S + +FE+  L  LRS    LL+ I
Sbjct: 426  LTELLKQPQFSPLKTEEQVVVIFAGVNGYLDALAVSDVGRFEQGLLTLLRSDHPDLLQAI 485

Query: 1534 REEGQISPQTDAQLKDVVVNFLATF 1608
              + QI+      +KD ++  L T+
Sbjct: 486  AHQKQITD----DVKDKLIVVLNTY 506


>gi|114524|sp|P05439|ATPA_RHOBL ATP synthase alpha chain
 gi|79546|pir||S04672 H+-transporting two-sector ATPase (EC 3.6.3.14)
            alpha chain - Rhodopseudomonas blastica
 gi|45977|emb|CAA77313.1| ATPase alpha subunit [Rhodobacter blasticus]
          Length = 512

 Score =  666 bits (1718), Expect = 0.0
 Identities = 344/509 (67%), Positives = 403/509 (78%), Gaps = 11/509 (2%)
 Frame = +1

Query: 88   GASGSEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKG 267
            G   +E+S IL+E+I        + E G+VLS+GDGIARVYGL N+QA EMVEF  GI+G
Sbjct: 2    GIQAAEISAILKEQIKNFGKDAEVAEVGRVLSVGDGIARVYGLDNVQAGEMVEFPGGIRG 61

Query: 268  MAMNLXXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPI 447
            MA+NL               I+EGD VKRT +IVDVP G+GLLGRVVDALGNPIDGKGPI
Sbjct: 62   MALNLEVDNVGIVIFGDDRDIKEGDTVKRTKSIVDVPAGNGLLGRVVDALGNPIDGKGPI 121

Query: 448  ANARRSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAID 627
              + R   +VKAPGIIPR  V EPM TG+KAVD+++PIGRGQRELIIGDRQTGKTA+A+D
Sbjct: 122  VASERRIADVKAPGIIPRKGVHEPMATGLKAVDAMIPIGRGQRELIIGDRQTGKTAVALD 181

Query: 628  TIINQKRFNDAG--DDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDA 801
            TI+NQK +NDA   D+ KKL+C+YVA+GQKRSTVAQ+VK+L + GAM YT+VV+ATASD
Sbjct: 182  TILNQKVYNDAAGDDESKKLYCVYVAIGQKRSTVAQLVKKLEETGAMAYTVVVAATASDP 241

Query: 802  APLQFLAPYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVF 981
            AP+QFLAP+SG A+GE FRDNG+HAL+I+DDLSKQAVAYRQMSLLLRRPPGREAYPGDVF
Sbjct: 242  APMQFLAPFSGTAIGEFFRDNGRHALMIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVF 301

Query: 982  YLHSRLLERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYK 1161
            YLHSRLLER+AKMN   G GSLTALP+IETQAGD+SAYIPTNVISITDGQIFLE+ELFY+
Sbjct: 302  YLHSRLLERSAKMNGDFGAGSLTALPIIETQAGDISAYIPTNVISITDGQIFLESELFYQ 361

Query: 1162 GVRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLN 1341
            G+RPA+N GLSVSRVGS+AQT AMK VAG +KLELAQYRE+AAFAQFGSDLDASTQ LLN
Sbjct: 362  GIRPAVNTGLSVSRVGSSAQTSAMKSVAGKVKLELAQYREMAAFAQFGSDLDASTQALLN 421

Query: 1342 RGVRLTELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQAL 1521
            RG RLTEL+KQ QY P+   E V +I+AG  GYLDKV    + +FE   L HLR+  +AL
Sbjct: 422  RGARLTELMKQPQYSPLTNAEIVCIIFAGTNGYLDKVAVRDVGRFEAGLLKHLRTKGKAL 481

Query: 1522 LKTIRE---------EGQISPQTDAQLKD 1581
            L  + +         E  I  + DA  KD
Sbjct: 482  LDDMTKNDRKVAGDLEKAIRAELDAFAKD 510


>gi|49095520|ref|XP_409221.1| hypothetical protein AN5084.2
            [Aspergillus nidulans FGSC A4]
 gi|40740989|gb|EAA60179.1| hypothetical protein AN5084.2 [Aspergillus
            nidulans FGSC A4]
          Length = 668

 Score =  665 bits (1715), Expect = 0.0
 Identities = 329/502 (65%), Positives = 409/502 (80%)
 Frame = +1

Query: 103  EVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMNL 282
            E+S +LE+RI G +   NL E+G VLS+ DGI R  GL N+QAEE+VEF+SG+KGM MNL
Sbjct: 166  EISSLLEQRIRGLKGSPNLAESGHVLSVCDGIVRARGLTNVQAEELVEFESGVKGMCMNL 225

Query: 283  XXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANARR 462
                           +++ + V RTG IVDVPVG  +LGRVVDALGNPIDGKGPI    R
Sbjct: 226  ESNHVGIVLFGSDRLVKQSEPVWRTGEIVDVPVGPKMLGRVVDALGNPIDGKGPIETTER 285

Query: 463  SRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIINQ 642
            SR ++KAPGI+PR SV +P+ TG+KA+D++VPIGRGQRELIIGDRQTGKTAIA+DTI+NQ
Sbjct: 286  SRAQIKAPGILPRRSVNQPVQTGLKAIDAMVPIGRGQRELIIGDRQTGKTAIALDTILNQ 345

Query: 643  KRFNDAGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQFLA 822
            K +N + D+ KKL+C+YVAVGQKRSTVAQ+VK L +  AM Y+IVV+ATAS+AAPLQ++A
Sbjct: 346  KIWNKSDDESKKLYCVYVAVGQKRSTVAQLVKTLEENDAMKYSIVVAATASEAAPLQYIA 405

Query: 823  PYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLL 1002
            P++GCAMGE FRD+G+HA+II+DDLSK AVAYRQMSLLLRRPPGREAYPGDVFYLHSRLL
Sbjct: 406  PFAGCAMGEWFRDHGRHAIIIYDDLSKHAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLL 465

Query: 1003 ERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPAIN 1182
            ERAAK+N+  GGGSLTALP+IETQ GDVSAYIPTNVISITDGQI+LE+ELF +G+RPAIN
Sbjct: 466  ERAAKLNDKHGGGSLTALPIIETQGGDVSAYIPTNVISITDGQIYLESELFNRGIRPAIN 525

Query: 1183 VGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRLTE 1362
            VGLSVSRVGSAAQ +AMKQVAGS+KL LAQYRE+AAF+QFGSDLDA+T+Q L RG  LTE
Sbjct: 526  VGLSVSRVGSAAQVRAMKQVAGSLKLYLAQYREIAAFSQFGSDLDAATKQTLRRGEHLTE 585

Query: 1363 LLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQALLKTIREE 1542
            LLKQ QY PM + E V ++YAG+ G +D++    I  +E + LAH +S +  +L  I ++
Sbjct: 586  LLKQKQYAPMAVNEMVPLLYAGINGLIDRIPIGQIQSWEADVLAHFKSYEPEVLAQIEKD 645

Query: 1543 GQISPQTDAQLKDVVVNFLATF 1608
            G++S   +A++K++++ F A F
Sbjct: 646  GKLSHDLEARIKEIIIAFNAAF 667


>gi|49476189|ref|YP_034230.1| ATP synthase alpha chain [Bartonella
            henselae str. Houston-1]
 gi|49238997|emb|CAF28297.1| ATP synthase alpha chain [Bartonella
            henselae str. Houston-1]
          Length = 511

 Score =  664 bits (1714), Expect = 0.0
 Identities = 345/505 (68%), Positives = 408/505 (80%), Gaps = 2/505 (0%)
 Frame = +1

Query: 100  SEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMN 279
            SE+SKIL+E+I   +    + E G VLS+GDGIARVYGL N+QA EMV F +G++GMA+N
Sbjct: 6    SEISKILKEQIKNFDQKAEVSEIGWVLSVGDGIARVYGLDNVQAGEMVSFSNGVRGMALN 65

Query: 280  LXXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANAR 459
            L               IREGD VKR GAIV+VPVG  LLGRVVDALGNPIDGKGP+
Sbjct: 66   LEIDNVGVVIFGSDRDIREGDCVKRLGAIVEVPVGPALLGRVVDALGNPIDGKGPLKATE 125

Query: 460  RSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIIN 639
              RV+VKAPGIIPR SV EPM TG+KA+D+L+PIGRGQREL+IGDRQTGKTAI +D  +N
Sbjct: 126  YRRVDVKAPGIIPRQSVHEPMSTGLKAIDALIPIGRGQRELVIGDRQTGKTAILLDAFLN 185

Query: 640  QKRFN--DAGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQ 813
            QK F+  DAG++K K++CIYVA+GQKRSTVAQ VK L + GA++Y+I+V+ATASD AP+Q
Sbjct: 186  QKPFHEKDAGNEKDKVYCIYVAIGQKRSTVAQFVKVLEERGALEYSIIVAATASDPAPMQ 245

Query: 814  FLAPYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHS 993
            F+AP +GCAMGE+FRDNG+HALI +DDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHS
Sbjct: 246  FIAPLAGCAMGEYFRDNGQHALIGYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHS 305

Query: 994  RLLERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRP 1173
            RLLERAAK+N   G GSLTALPVIETQA DVSAYIPTNVISITDGQIFLET LFY+G+RP
Sbjct: 306  RLLERAAKLNAENGSGSLTALPVIETQANDVSAYIPTNVISITDGQIFLETNLFYQGIRP 365

Query: 1174 AINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVR 1353
            A+NVGLSVSRVGSAAQ KAMKQVAGS+K ELAQYRE+AAFAQFGSDLDASTQ+LLNRG R
Sbjct: 366  AVNVGLSVSRVGSAAQIKAMKQVAGSIKGELAQYREMAAFAQFGSDLDASTQRLLNRGAR 425

Query: 1354 LTELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQALLKTI 1533
            LTELLKQ Q+ P+  EEQV VI+AGV GYLD +  + + +FE+  L  LRS    LL+ I
Sbjct: 426  LTELLKQPQFSPLKTEEQVVVIFAGVNGYLDALAVADVGRFEQGLLTLLRSDHSDLLQAI 485

Query: 1534 REEGQISPQTDAQLKDVVVNFLATF 1608
             ++ Q++      +KD ++  L T+
Sbjct: 486  ADQKQLTD----DIKDKLIVVLNTY 506


>gi|39933255|ref|NP_945531.1| putative H+-transporting ATP synthase
            alpha chain. [Rhodopseudomonas palustris CGA009]
 gi|39652880|emb|CAE25622.1| putative H+-transporting ATP synthase
            alpha chain. [Rhodopseudomonas palustris CGA009]
          Length = 510

 Score =  663 bits (1711), Expect = 0.0
 Identities = 339/504 (67%), Positives = 408/504 (80%), Gaps = 1/504 (0%)
 Frame = +1

Query: 100  SEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMN 279
            +E+S IL+++I        + E G+VLS+GDGIARVYGL N+ A EMVEF++G +GMA+N
Sbjct: 6    AEISAILKDQIKNFGQEAEVSEVGQVLSVGDGIARVYGLDNVLAGEMVEFENGTRGMALN 65

Query: 280  LXXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANAR 459
            L               I+EG  VKRT +IVD PVG GLLGRVVDALGNPIDGKGPI
Sbjct: 66   LETDNVGVVIFGADREIKEGQTVKRTRSIVDAPVGKGLLGRVVDALGNPIDGKGPIQAVE 125

Query: 460  RSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIIN 639
            R RV+VKAPGIIPR SV EPM TG+K++D+L+PIGRGQRELIIGDRQTGKTAIA+DTI+N
Sbjct: 126  RKRVDVKAPGIIPRKSVHEPMATGLKSIDALIPIGRGQRELIIGDRQTGKTAIALDTILN 185

Query: 640  QKRFNDAG-DDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQF 816
            QK  N  G  + +KL+C+YVAVGQKRSTVAQ VK L + GA++Y++VV+ATASD AP+Q+
Sbjct: 186  QKPLNVEGAPESQKLYCVYVAVGQKRSTVAQFVKVLEEQGALEYSVVVAATASDPAPMQY 245

Query: 817  LAPYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSR 996
            +AP++GC +GE+FRDNG HA+II+DDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSR
Sbjct: 246  IAPFTGCTIGEYFRDNGMHAVIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSR 305

Query: 997  LLERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPA 1176
            LLERAAK+N+  G GSLTALPVIETQA DVSAYIPTNVISITDGQIFLET+LF++G+RPA
Sbjct: 306  LLERAAKLNDEQGNGSLTALPVIETQANDVSAYIPTNVISITDGQIFLETDLFFQGIRPA 365

Query: 1177 INVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRL 1356
            +NVGLSVSRVGS+AQTKAMK+VAG +K ELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RL
Sbjct: 366  VNVGLSVSRVGSSAQTKAMKKVAGKIKGELAQYREMAAFAQFGSDLDAATQRLLNRGSRL 425

Query: 1357 TELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQALLKTIR 1536
            TELLKQ Q+ P+ +EEQV VI+AG  GYLD +  + +  FE   LA LR  +  +L+ IR
Sbjct: 426  TELLKQPQFSPLKMEEQVCVIWAGTNGYLDALPLNKVRAFEDGLLALLRGKESGILEAIR 485

Query: 1537 EEGQISPQTDAQLKDVVVNFLATF 1608
                +S  T A+LK VV ++  TF
Sbjct: 486  TSRDLSDDTAAKLKAVVESYAKTF 509


>gi|28630328|gb|AAM93476.1| H+-transporting ATP synthase alpha subunit
            isoform 1 [Branchiostoma lanceolatum]
          Length = 394

 Score =  663 bits (1710), Expect = 0.0
 Identities = 339/394 (86%), Positives = 364/394 (92%)
 Frame = +1

Query: 205  VYGLKNIQAEEMVEFDSGIKGMAMNLXXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVG 384
            VYGLKNIQAEEMVEF SG+KGMA+NL               I+EGDIVKRTGAIVDVPVG
Sbjct: 1    VYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGIVVFGNDKLIKEGDIVKRTGAIVDVPVG 60

Query: 385  DGLLGRVVDALGNPIDGKGPIANARRSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIG 564
            + +LGRVVDALG PIDGKGP+ +  R RV +KAPGIIPR+SV+EPM+TG+KAVDSLVPIG
Sbjct: 61   EDILGRVVDALGEPIDGKGPLVSKERRRVGLKAPGIIPRISVKEPMLTGIKAVDSLVPIG 120

Query: 565  RGQRELIIGDRQTGKTAIAIDTIINQKRFNDAGDDKKKLFCIYVAVGQKRSTVAQIVKRL 744
            RGQREL+IGDRQTGKTA+AIDTIINQK FNDA D+KKKL+CIYVA+GQKRSTVAQ+VKRL
Sbjct: 121  RGQRELLIGDRQTGKTALAIDTIINQKGFNDAQDEKKKLYCIYVAIGQKRSTVAQLVKRL 180

Query: 745  TDAGAMDYTIVVSATASDAAPLQFLAPYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQ 924
            TDA AM YTIVVSATASDAAPLQ+LAPYSGC+MGE FRDNGKHALII+DDLSKQAVAYRQ
Sbjct: 181  TDADAMRYTIVVSATASDAAPLQYLAPYSGCSMGEFFRDNGKHALIIYDDLSKQAVAYRQ 240

Query: 925  MSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPT 1104
            MSLLLRRPPGREAYPGDVFYLHSRLLERAAKMN+S GGGSLTALPVIETQAGDVSAYIPT
Sbjct: 241  MSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDSYGGGSLTALPVIETQAGDVSAYIPT 300

Query: 1105 NVISITDGQIFLETELFYKGVRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREV 1284
            NVISITDGQIFLETELFYKG+RPAINVGLSVSRVGSAAQTKAMKQV+GSMKLELAQYREV
Sbjct: 301  NVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTKAMKQVSGSMKLELAQYREV 360

Query: 1285 AAFAQFGSDLDASTQQLLNRGVRLTELLKQGQYV 1386
            AAFAQFGSDLDASTQ LL+RGVRLTELLKQGQYV
Sbjct: 361  AAFAQFGSDLDASTQALLSRGVRLTELLKQGQYV 394


>gi|27375553|ref|NP_767082.1| ATP synthase alpha chain [Bradyrhizobium
            japonicum USDA 110]
 gi|27348690|dbj|BAC45707.1| ATP synthase alpha chain [Bradyrhizobium
            japonicum USDA 110]
          Length = 509

 Score =  663 bits (1710), Expect = 0.0
 Identities = 339/503 (67%), Positives = 404/503 (79%)
 Frame = +1

Query: 100  SEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMN 279
            +E+S IL+++I        + E G+VLS+GDGIARVYGL N+QA EMVEF++G +GMA+N
Sbjct: 6    AEISAILKDQIKNFGQEAEVSEVGQVLSVGDGIARVYGLDNVQAGEMVEFENGTRGMALN 65

Query: 280  LXXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANAR 459
            L               I+EG  VKRT AIVD PVG GLLGRVVDALGNPIDGKGPI   +
Sbjct: 66   LETDNVGVVIFGADREIKEGQTVKRTRAIVDAPVGKGLLGRVVDALGNPIDGKGPIQADK 125

Query: 460  RSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIIN 639
            R RV+VKAPGIIPR SV EPM TG+KA+D+L+PIGRGQRELIIGDRQTGKTAIA+DTI+N
Sbjct: 126  RMRVDVKAPGIIPRKSVSEPMATGLKAIDALIPIGRGQRELIIGDRQTGKTAIALDTILN 185

Query: 640  QKRFNDAGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQFL 819
            QK  N   D+  KL+C+YVAVGQKRSTVAQ VK L + GA++Y+I+V+ATASD AP+Q++
Sbjct: 186  QKPLNAQPDENIKLYCVYVAVGQKRSTVAQFVKVLEEQGALEYSIIVAATASDPAPMQYI 245

Query: 820  APYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL 999
            AP++ C MGE FRDNG HA+II+DDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL
Sbjct: 246  APFTACTMGEFFRDNGMHAVIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL 305

Query: 1000 LERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPAI 1179
            LERAAK++   G GSLTALP+IETQA DVSAYIPTNVISITDGQIFLET+LF++G+RPA+
Sbjct: 306  LERAAKLSKDHGSGSLTALPIIETQANDVSAYIPTNVISITDGQIFLETDLFFQGIRPAV 365

Query: 1180 NVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRLT 1359
            NVGLSVSRVGS+AQTKA K+VAG +K ELAQYRE+AAFAQFGSDLDASTQ+LLNRG RLT
Sbjct: 366  NVGLSVSRVGSSAQTKATKKVAGKIKGELAQYREMAAFAQFGSDLDASTQRLLNRGSRLT 425

Query: 1360 ELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQALLKTIRE 1539
            ELLKQ Q+ P+ +EEQV VI+AG  GYLD +  + +  FE   L+ LR     +L +IR+
Sbjct: 426  ELLKQPQFSPLKMEEQVCVIWAGTNGYLDPLPVNKVRAFEDGLLSLLRGKNVEILNSIRD 485

Query: 1540 EGQISPQTDAQLKDVVVNFLATF 1608
               +S  T A+LK VV  F  +F
Sbjct: 486  SRDLSDDTAAKLKSVVEGFAKSF 508


>gi|22958763|ref|ZP_00006427.1| COG0056: F0F1-type ATP synthase, alpha
            subunit [Rhodobacter sphaeroides]
          Length = 512

 Score =  662 bits (1708), Expect = 0.0
 Identities = 341/509 (66%), Positives = 405/509 (78%), Gaps = 2/509 (0%)
 Frame = +1

Query: 88   GASGSEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKG 267
            G   +E+S IL+E+I        + E G+VLS+GDGIARV+GL N+QA EMVEF  GI+G
Sbjct: 2    GIQAAEISAILKEQIKNFGQQAEVAEVGRVLSVGDGIARVHGLDNVQAGEMVEFPGGIRG 61

Query: 268  MAMNLXXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPI 447
            MA+NL               I+EGD VKRT +IVDVP GD LLGRVVD LGNPIDGKGPI
Sbjct: 62   MALNLEVDNVGVVIFGDDRSIKEGDTVKRTKSIVDVPAGDALLGRVVDGLGNPIDGKGPI 121

Query: 448  ANARRSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAID 627
            A   R   +VKAPGIIPR  V EPM TG+K+VD+++PIGRGQRELIIGDRQTGKTAIA+D
Sbjct: 122  AATERRVADVKAPGIIPRKGVHEPMATGLKSVDAMIPIGRGQRELIIGDRQTGKTAIALD 181

Query: 628  TIINQKRFNDAG--DDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDA 801
            TI+NQK +N+A   D+ KKL+CIYVA+GQKRSTVAQ+VK+L + GA+DYT+VV+ATASD
Sbjct: 182  TILNQKSYNEAAGDDESKKLYCIYVAIGQKRSTVAQLVKKLEETGAIDYTLVVAATASDP 241

Query: 802  APLQFLAPYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVF 981
            AP+QFLAPY+  AM E+FRDNG+HALII+DDLSKQAVAYRQMSLLLRRPPGREAYPGDVF
Sbjct: 242  APMQFLAPYAATAMAEYFRDNGRHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVF 301

Query: 982  YLHSRLLERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYK 1161
            YLHSRLLER+AK+N   G GSLTALP+IETQ GDVSA+IPTNVISITDGQIFLETELFY+
Sbjct: 302  YLHSRLLERSAKLNKDHGAGSLTALPIIETQGGDVSAFIPTNVISITDGQIFLETELFYQ 361

Query: 1162 GVRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLN 1341
            G+RPA+N GLSVSRVGS+AQT AMK VAG +KLELAQYRE+AAFAQFGSDLDA+TQQLLN
Sbjct: 362  GIRPAVNTGLSVSRVGSSAQTDAMKSVAGPVKLELAQYREMAAFAQFGSDLDAATQQLLN 421

Query: 1342 RGVRLTELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQAL 1521
            RG RLTEL+KQ QY P+   E V VI+AG KGYLDKV    + ++E+  L HLR++ + L
Sbjct: 422  RGARLTELMKQPQYAPLTNAEIVCVIFAGTKGYLDKVPVKDVGRWEQGLLKHLRTNAKDL 481

Query: 1522 LKTIREEGQISPQTDAQLKDVVVNFLATF 1608
            L  I    +   +   +L+D +   L T+
Sbjct: 482  LADITNNDR---KVKGELEDKIRAALDTY 507


>gi|114405|sp|P05494|ATP0_MAIZE ATP synthase alpha chain,
            mitochondrial
 gi|67821|pir||PWZMAM H+-transporting two-sector ATPase (EC 3.6.3.14)
            alpha chain - maize mitochondrion
 gi|13901|emb|CAA77319.1| put. F1-ATPase alpha subunit (aa 1-508) [Zea
            mays]
 gi|897619|gb|AAA70269.1| F1-ATPase alpha subunit
 gi|40795004|gb|AAR91048.1| ATPase subunit 1 [Zea mays]
 gi|40795005|gb|AAR91049.1| ATPase subunit 1 [Zea mays]
 gi|224968|prf||1204280A ATPase alpha,F1
          Length = 508

 Score =  660 bits (1703), Expect = 0.0
 Identities = 343/503 (68%), Positives = 411/503 (81%), Gaps = 5/503 (0%)
 Frame = +1

Query: 100  SEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMN 279
            +E++ +LE R++   T + ++E G+V+S+GDGIARVYGL  IQA EMVEF SG+KG+A+N
Sbjct: 8    AELTTLLESRMINFYTNLKVDEIGRVVSVGDGIARVYGLNEIQAGEMVEFASGVKGIALN 67

Query: 280  LXXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANAR 459
            L               I+EGD+VKRTG+IVDVP G  +LGRVVDALG PIDGKG +++
Sbjct: 68   LENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGKGALSDHE 127

Query: 460  RSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIIN 639
            R RVEVKAPGII R SV EPM TG+KAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTI+N
Sbjct: 128  RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILN 187

Query: 640  QKRFNDAG-DDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQF 816
            QK+ N  G ++ + L+C+YVA+GQKRSTVAQ+V+ L++A A++Y+++V+ATASD APLQF
Sbjct: 188  QKQMNSRGTNESETLYCVYVAIGQKRSTVAQLVQILSEANALEYSMLVAATASDPAPLQF 247

Query: 817  LAPYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSR 996
            LAPYSGCAMGE+FRDNG HALII+DDLSKQAVAYRQMSLLLRRPPGREA+PGDVFYLHSR
Sbjct: 248  LAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSR 307

Query: 997  LLERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPA 1176
            LLERAAK ++  G GSLTALPVIETQAGDVSAYIPTNVISITDGQI LETELFY+G+RPA
Sbjct: 308  LLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPA 367

Query: 1177 INVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRL 1356
            INVGLSVSRVGSAAQ KAMKQV GS KLELAQYREVAAFAQFGSDLDA+TQ LLNRG RL
Sbjct: 368  INVGLSVSRVGSAAQLKAMKQVCGSSKLELAQYREVAAFAQFGSDLDAATQALLNRGARL 427

Query: 1357 TELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQALLKTIR 1536
            TE+ KQ QY P+ IE+Q+ VIYA V G+ D++    I+++EK  L+ +      LLK+
Sbjct: 428  TEVPKQPQYEPLPIEKQIVVIYAAVNGFCDRMPLDRISQYEKNILSTINPE---LLKSFL 484

Query: 1537 EEGQIS----PQTDAQLKDVVVN 1593
            E+G ++     + DA LK+  +N
Sbjct: 485  EKGGLTNERKMEPDASLKESALN 507


>gi|16127679|ref|NP_422243.1| ATP synthase F1, alpha subunit
            [Caulobacter crescentus CB15]
 gi|25290415|pir||G87676 ATP synthase F1, alpha subunit [imported] -
            Caulobacter crescentus
 gi|13425167|gb|AAK25411.1| ATP synthase F1, alpha subunit
            [Caulobacter crescentus CB15]
          Length = 510

 Score =  658 bits (1697), Expect = 0.0
 Identities = 336/504 (66%), Positives = 403/504 (79%), Gaps = 1/504 (0%)
 Frame = +1

Query: 100  SEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFD-SGIKGMAM 276
            +E+S IL+ +I        + + G+VLS+GDGIAR+YGL N+QA EM+EF  +G+KGMA+
Sbjct: 6    AEISAILKSQIANFGEEAAVSDVGQVLSVGDGIARIYGLDNVQAGEMLEFPKAGVKGMAL 65

Query: 277  NLXXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANA 456
            NL               I+EGD V+R G IVDVPVG GLLGRVV+ LG PIDGKGPI
Sbjct: 66   NLERDNVGAVIFGQDQEIKEGDEVRRLGEIVDVPVGRGLLGRVVNPLGEPIDGKGPIQYT 125

Query: 457  RRSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTII 636
             R RV+VKAPGIIPR SV EP+ TG+K++D+L+P+GRGQRELIIGDRQTGKTA+AIDTI+
Sbjct: 126  ERRRVDVKAPGIIPRKSVHEPVQTGLKSIDTLIPVGRGQRELIIGDRQTGKTAVAIDTIL 185

Query: 637  NQKRFNDAGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQF 816
            NQK  N   D+  KL+C+YVA+GQKRSTVAQIVK L + GA++YT VV A+AS+ APLQ+
Sbjct: 186  NQKAVNAGKDESAKLYCVYVAIGQKRSTVAQIVKTLEEHGALEYTTVVVASASEPAPLQY 245

Query: 817  LAPYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSR 996
            LAP++GCAMGE FRDNG H LII+DDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSR
Sbjct: 246  LAPFAGCAMGEWFRDNGLHGLIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSR 305

Query: 997  LLERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPA 1176
            LLERAAK+N   G GSLTALP+IETQA DVSAYIPTNVISITDGQIFLET+LFY+G+RPA
Sbjct: 306  LLERAAKLNEDNGSGSLTALPIIETQANDVSAYIPTNVISITDGQIFLETDLFYQGIRPA 365

Query: 1177 INVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRL 1356
            +NVG+SVSRVGS+AQ KAMKQVAG +K ELAQYRE+AAFA+FGSDLDASTQ++L RG RL
Sbjct: 366  VNVGISVSRVGSSAQIKAMKQVAGPIKGELAQYREMAAFAKFGSDLDASTQKMLARGERL 425

Query: 1357 TELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQALLKTIR 1536
            TELLKQ QY P+ +EEQV VIYAG +GYLD +  S++ +FE EFLA L S    LL+ IR
Sbjct: 426  TELLKQPQYAPLSVEEQVCVIYAGTRGYLDGIPTSSVRRFEAEFLARLHSQHADLLEGIR 485

Query: 1537 EEGQISPQTDAQLKDVVVNFLATF 1608
             +  +    +  LK  + +F +TF
Sbjct: 486  TKKALDKDLENTLKSALDSFSSTF 509


>gi|543866|sp|P05493|ATP0_PEA ATP synthase alpha chain, mitochondrial
 gi|541972|pir||JN0769 H+-transporting two-sector ATPase (EC 3.6.3.14)
            alpha chain - garden pea mitochondrion
 gi|13381|emb|CAA28964.1| unnamed protein product [Pisum sativum]
 gi|286140|dbj|BAA03524.1| F1 ATPase alpha subunit [Pisum sativum]
          Length = 507

 Score =  657 bits (1696), Expect = 0.0
 Identities = 341/503 (67%), Positives = 412/503 (81%), Gaps = 3/503 (0%)
 Frame = +1

Query: 100  SEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMN 279
            +E++ +LE RI    T   ++E G+V+S+GDGIARVYGL  IQA E+VEF SG+KG+A+N
Sbjct: 8    AELTTLLESRITNFYTNFQVDEIGRVVSVGDGIARVYGLNEIQAGELVEFASGVKGIALN 67

Query: 280  LXXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANAR 459
            L               I+EGD+VKRTG+IVDVP G  +LGRVVDALG PIDG+G +++
Sbjct: 68   LENENVGIVVFGSDTSIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE 127

Query: 460  RSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIIN 639
            R RVEVKAPGII R SV EPM TG+KAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTI+N
Sbjct: 128  RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILN 187

Query: 640  QKRFND-AGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQF 816
            QK+ N  A  + + L+C+YVA+GQKRSTVAQ+V+ L++A A++Y+I+V+ATASD APLQF
Sbjct: 188  QKQMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQF 247

Query: 817  LAPYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSR 996
            LAPYSGCAMGE+FRDNG HALII+DDLSKQAVAYRQMSLLLRRPPGREA+PGDVFYLHSR
Sbjct: 248  LAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSR 307

Query: 997  LLERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPA 1176
            LLERAAK ++  G GSLTALPVIETQAGDVSAYIPTNVISITDGQI LETELFY+G+RPA
Sbjct: 308  LLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPA 367

Query: 1177 INVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRL 1356
            INVGLSVSRVGSAAQ KAMKQV GS+KLELAQYREVAAFAQFGSDLDA+TQ LLNRG RL
Sbjct: 368  INVGLSVSRVGSAAQLKAMKQVCGSLKLELAQYREVAAFAQFGSDLDAATQALLNRGARL 427

Query: 1357 TELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQALLKTIR 1536
            TE+LKQ QY P+ IE+Q+ VIYA V G+ D++    I ++E++ L+ ++   Q LL++++
Sbjct: 428  TEVLKQPQYAPLPIEKQILVIYAAVNGFCDRMPLDKIAQYERDILSTIK---QELLQSLK 484

Query: 1537 E--EGQISPQTDAQLKDVVVNFL 1599
                G+   + DA LK+  ++ +
Sbjct: 485  GGLTGERKIEPDAFLKEKALSLI 507


>gi|100086|pir||A26760 H+-transporting two-sector ATPase (EC 3.6.3.14)
            alpha chain - garden pea mitochondrion
 gi|357982|prf||1305286A ATPase alpha,F1
          Length = 507

 Score =  657 bits (1696), Expect = 0.0
 Identities = 341/503 (67%), Positives = 412/503 (81%), Gaps = 3/503 (0%)
 Frame = +1

Query: 100  SEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMN 279
            +E++ +LE RI    T   ++E G+V+S+GDGIARVYGL  IQA E+VEF SG+KG+A+N
Sbjct: 8    AELTTLLESRITNFYTNFQVDEIGRVVSVGDGIARVYGLNEIQAGELVEFASGVKGIALN 67

Query: 280  LXXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANAR 459
            L               I+EGD+VKRTG+IVDVP G  +LGRVVDALG PIDG+G +++
Sbjct: 68   LENENVGIVVFGSDTSIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE 127

Query: 460  RSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIIN 639
            R RVEVKAPGII R SV EPM TG+KAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTI+N
Sbjct: 128  RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILN 187

Query: 640  QKRFND-AGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQF 816
            QK+ N  A  + + L+C+YVA+GQKRSTVAQ+V+ L++A A++Y+I+V+ATASD APLQF
Sbjct: 188  QKQMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQF 247

Query: 817  LAPYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSR 996
            LAPYSGCAMGE+FRDNG HALII+DDLSKQAVAYRQMSLLLRRPPGREA+PGDVFYLHSR
Sbjct: 248  LAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSR 307

Query: 997  LLERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPA 1176
            LLERAAK ++  G GSLTALPVIETQAGDVSAYIPTNVISITDGQI LETELFY+G+RPA
Sbjct: 308  LLERAAKWSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPA 367

Query: 1177 INVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRL 1356
            INVGLSVSRVGSAAQ KAMKQV GS+KLELAQYREVAAFAQFGSDLDA+TQ LLNRG RL
Sbjct: 368  INVGLSVSRVGSAAQLKAMKQVCGSLKLELAQYREVAAFAQFGSDLDAATQALLNRGARL 427

Query: 1357 TELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQALLKTIR 1536
            TE+LKQ QY P+ IE+Q+ VIYA V G+ D++    I ++E++ L+ ++   Q LL++++
Sbjct: 428  TEVLKQPQYAPLPIEKQILVIYAAVNGFCDRMPLDKIAQYERDILSTIK---QELLQSLK 484

Query: 1537 E--EGQISPQTDAQLKDVVVNFL 1599
                G+   + DA LK+  ++ +
Sbjct: 485  GGLTGERKIEPDAFLKEKALSLI 507


>gi|114409|sp|P15998|ATP0_ORYSA ATP synthase alpha chain,
            mitochondrial
 gi|67822|pir||PWRZAM H+-transporting two-sector ATPase (EC 3.6.3.14)
            alpha chain - rice mitochondrion
 gi|13959|emb|CAA35787.1| unnamed protein product [Oryza sativa
            (japonica cultivar-group)]
 gi|23495419|dbj|BAC19899.1| ATP synthase F0 subunit 1 [Oryza sativa
            (japonica cultivar-group)]
          Length = 509

 Score =  657 bits (1695), Expect = 0.0
 Identities = 343/498 (68%), Positives = 406/498 (80%), Gaps = 5/498 (1%)
 Frame = +1

Query: 100  SEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMN 279
            +E++ +LE R+    T   ++E G+V+S+GDGIARVYGL  IQA EMVEF SG+KG+A+N
Sbjct: 8    AELTTLLESRMTNFYTNFQVDEIGRVVSVGDGIARVYGLNEIQAGEMVEFASGVKGIALN 67

Query: 280  LXXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANAR 459
            L               I+EGD+VKRTG+IVDVP G  +LGRVVDALG PIDGKG +++
Sbjct: 68   LENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGKGALSDHE 127

Query: 460  RSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIIN 639
            R RVEVKAPGII R SV EPM TG+KAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTI+N
Sbjct: 128  RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILN 187

Query: 640  QKRFNDAG-DDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQF 816
            QK+ N  G ++ + L+C+YVA+GQKRSTVAQ+V+ L++A A++Y+I+V+ATASD APLQF
Sbjct: 188  QKQMNSRGTNESETLYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQF 247

Query: 817  LAPYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSR 996
            LAPYSGCAMGE+FRDNG HALII+DDLSKQAVAYRQMSLLLRRPPGREA+PGDVFYLHSR
Sbjct: 248  LAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSR 307

Query: 997  LLERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPA 1176
            LLERAAK ++  G GSLTALPVIETQAGDVSAYIPTNVISITDGQI LETELFY+G+RPA
Sbjct: 308  LLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPA 367

Query: 1177 INVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRL 1356
            INVGLSVSRVGSAAQ KAMKQV GS KLELAQYREVAAFAQFGSDLDA+TQ LLNRG RL
Sbjct: 368  INVGLSVSRVGSAAQLKAMKQVCGSSKLELAQYREVAAFAQFGSDLDAATQALLNRGARL 427

Query: 1357 TELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQALLKTIR 1536
            TE+ KQ QY P+ IE+Q+ VIYA V G+ D++    I+++EK  L+ +      LLK+
Sbjct: 428  TEVPKQPQYEPLPIEKQIVVIYAAVNGFCDRMPLDRISQYEKAILSTINPE---LLKSFN 484

Query: 1537 EEGQISP----QTDAQLK 1578
            E+G ++     + DA LK
Sbjct: 485  EKGGLTNERKIEPDASLK 502


>gi|5305369|gb|AAD41619.1| ATP synthase alpha chain [Vigna radiata]
          Length = 508

 Score =  656 bits (1692), Expect = 0.0
 Identities = 337/477 (70%), Positives = 396/477 (82%), Gaps = 1/477 (0%)
 Frame = +1

Query: 100  SEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMN 279
            +E++ +LE RI    T + ++E G+V+S+GDGIARVYGL  IQA EMVEF SG+KG+A+N
Sbjct: 8    AELTTLLESRITNFYTNLKVDEIGRVVSVGDGIARVYGLNEIQAGEMVEFASGVKGIALN 67

Query: 280  LXXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANAR 459
            L               I+EGD+VKRTG+IVDVP G  +LGRVVDALG PIDG+G +++
Sbjct: 68   LENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE 127

Query: 460  RSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIIN 639
            R RVEVKAPGII R SV EPM TG+KAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTI+N
Sbjct: 128  RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILN 187

Query: 640  QKRFND-AGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQF 816
            QK+ N  A  + + L+C+YVA+GQKRSTVAQ+V+ L++A A++Y+I+V+ATASD APLQF
Sbjct: 188  QKQMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQF 247

Query: 817  LAPYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSR 996
            LAPYSGCAMGE+FRDNG HALII+DDLSKQAVAYRQMSLLLRRPPGREA+PGDVFYLHSR
Sbjct: 248  LAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSR 307

Query: 997  LLERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPA 1176
            LLERAAK ++  G GSLTALPVIETQAGDVSAYIPTNVISITDGQI LETELFY+G+RPA
Sbjct: 308  LLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPA 367

Query: 1177 INVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRL 1356
            INVGLSVSRVGSAAQ KAMKQV GS+KLELAQYREVAAFAQFGSDLDA+TQ LLNRG RL
Sbjct: 368  INVGLSVSRVGSAAQLKAMKQVCGSLKLELAQYREVAAFAQFGSDLDAATQALLNRGARL 427

Query: 1357 TELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQALLK 1527
            TE+LKQ QY P+ IE+Q+ VIYA V G+ DK+    I ++E++ L  ++      LK
Sbjct: 428  TEVLKQPQYAPLPIEKQILVIYAAVNGFCDKMPLDQIPQYERDILTTIKPELLQSLK 484


>gi|3410894|dbj|BAA32243.1| F1 ATPase subunit alpha [Beta vulgaris]
          Length = 506

 Score =  656 bits (1692), Expect = 0.0
 Identities = 342/502 (68%), Positives = 409/502 (81%), Gaps = 3/502 (0%)
 Frame = +1

Query: 100  SEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMN 279
            +E++ +LE RI    T   ++E G+V+S+GDGIARVYGL  IQA EMVEF SG+KG+A+N
Sbjct: 8    AELTNLLESRITNFYTNFQVDEIGRVVSVGDGIARVYGLNEIQAGEMVEFASGVKGIALN 67

Query: 280  LXXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANAR 459
            L               I+EGD+VKRTG+IVDVP G  +LGRVVDALG PIDG+G +++
Sbjct: 68   LENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE 127

Query: 460  RSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIIN 639
            R RVEVKAPGII R SV EPM TG+KAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTI+N
Sbjct: 128  RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILN 187

Query: 640  QKRFND-AGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQF 816
            QK+ N  A  + + L+C+YVAVGQKRSTVAQ+V+ L++A A++Y+I+V+ATASD APLQF
Sbjct: 188  QKQLNSKATSESETLYCVYVAVGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQF 247

Query: 817  LAPYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSR 996
            LAPYSGCAMGE+FRDNG HALII+DDLSKQAVAYRQMSLLLRRPPGREA+PGDVFYLHSR
Sbjct: 248  LAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSR 307

Query: 997  LLERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPA 1176
            LLERAAK ++  G GSLTALPVIETQAGDVSAYIPTNVISITDGQI LETELFY+G+RPA
Sbjct: 308  LLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPA 367

Query: 1177 INVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRL 1356
            INVGLSVSRVGSAAQ KAMKQV GS+KLELAQYREVAAFAQFGSDLDA+TQ LLNRG RL
Sbjct: 368  INVGLSVSRVGSAAQLKAMKQVCGSLKLELAQYREVAAFAQFGSDLDAATQALLNRGARL 427

Query: 1357 TELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQALLKTIR 1536
            TE+LKQ QY P+ IE+Q+ VIYA V G+ D++    I+++E+     L S +  LL++++
Sbjct: 428  TEVLKQPQYAPLPIEKQILVIYAAVNGFCDRMPLDKISQYERTI---LNSVKPELLQSLK 484

Query: 1537 E--EGQISPQTDAQLKDVVVNF 1596
                 +   + D+ LK+  +N+
Sbjct: 485  GGLTNEKKMELDSFLKECALNY 506


>gi|114408|sp|P05492|ATP0_OENBI ATP synthase alpha chain,
            mitochondrial
 gi|100127|pir||S07316 H+-transporting two-sector ATPase (EC 3.6.3.14)
            alpha chain - German evening primrose mitochondrion
 gi|13165|emb|CAA27656.1| unnamed protein product [Oenothera biennis]
          Length = 511

 Score =  655 bits (1691), Expect = 0.0
 Identities = 343/499 (68%), Positives = 408/499 (81%), Gaps = 5/499 (1%)
 Frame = +1

Query: 100  SEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMN 279
            +E++ +LE RI    T   ++E G+V+S+GDGIARVYGL  IQA EMVEF SG+KG+A+N
Sbjct: 8    AELTTLLESRITNFYTNFQVDEIGRVISVGDGIARVYGLNEIQAGEMVEFASGVKGIALN 67

Query: 280  LXXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANAR 459
            L               I+EGD+VKRTG+IVDVP G  LLGRVVDALG PIDG+G + +
Sbjct: 68   LENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKSLLGRVVDALGVPIDGRGALGDHE 127

Query: 460  RSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIIN 639
            R RVEVK PGII R SV EPM TG+KAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTI+N
Sbjct: 128  RRRVEVKVPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILN 187

Query: 640  QKRFND-AGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQF 816
            QK+ N  A  + + L+C+YVA+GQKRSTVAQ+V+ L++  A++Y+I+V+ATASD APLQF
Sbjct: 188  QKQMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEGNALEYSILVAATASDPAPLQF 247

Query: 817  LAPYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSR 996
            LAPYSGCAMGE+FRDNG HALII+DDLSKQAVAYRQMSLLLRRPPGREA+PGDVFYLHSR
Sbjct: 248  LAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSR 307

Query: 997  LLERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPA 1176
            LLERAAK ++  G GSLTALPVIETQAGDVSAYIPTNVISITDGQI LETELFY+G+RPA
Sbjct: 308  LLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPA 367

Query: 1177 INVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRL 1356
            INVGLSVSRVGSAAQ KAMKQV GS+KLELAQYREVAAFAQFGSDLDA+TQ LLNRG RL
Sbjct: 368  INVGLSVSRVGSAAQLKAMKQVCGSLKLELAQYREVAAFAQFGSDLDAATQALLNRGARL 427

Query: 1357 TELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQALLKTIR 1536
            TE+LKQ QY P+ IE+Q+ VIYA V G+ D++    I+++E+   A  +S +Q LL+++
Sbjct: 428  TEILKQPQYAPLPIEKQIIVIYAAVNGFCDRMPLDRISQYER---AIPQSVKQELLQSLV 484

Query: 1537 EEGQISP----QTDAQLKD 1581
            E+G ++     + DA LK+
Sbjct: 485  EKGGLNNERKIEPDAFLKE 503


>gi|13725|emb|CAA34060.1| unnamed protein product [Triticum aestivum]
 gi|1405781|emb|CAA56641.1| ATP synthase subunit alpha [Triticum durum
            x Triticosecale sp.]
 gi|1430900|emb|CAA67492.1| atpA [Secale cereale]
          Length = 509

 Score =  654 bits (1688), Expect = 0.0
 Identities = 342/505 (67%), Positives = 408/505 (80%), Gaps = 5/505 (0%)
 Frame = +1

Query: 100  SEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMN 279
            +E++ +LE R+    T   ++E G+V+S+GDGIARVYGL  IQA EMVEF SG+KG+A+N
Sbjct: 8    AELTTLLESRMTNFYTNFQVDEIGRVVSVGDGIARVYGLNEIQAGEMVEFASGVKGIALN 67

Query: 280  LXXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANAR 459
            L               I+EGD+VKRTG+IVDVP G  +LGRVVDALG PIDGKG +++
Sbjct: 68   LENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGKGALSDHE 127

Query: 460  RSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIIN 639
            R RVEVKAPGII R SV EPM TG+KAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTI+N
Sbjct: 128  RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILN 187

Query: 640  QKRFNDAG-DDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQF 816
            QK+ N  G ++ + L+C+YVA+GQKRSTVAQ+V+ L++A A++Y+I+V+ATASD APLQF
Sbjct: 188  QKQMNSRGTNESETLYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQF 247

Query: 817  LAPYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSR 996
            LAPYSGCAMGE+FRDNG HALII+DDLSKQAVAYRQMSLLLRRPPGREA+PGDVFYLHSR
Sbjct: 248  LAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSR 307

Query: 997  LLERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPA 1176
            LLERAAK ++  G GS TALPVIETQAGDVSAYIPTNVISITDGQI LETELFY+G+RPA
Sbjct: 308  LLERAAKRSDQTGAGSSTALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPA 367

Query: 1177 INVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRL 1356
            INVGLSVSRVGSAAQ KAMKQV GS KLELAQYREVAAFAQFGSDLDA+TQ LLNRG RL
Sbjct: 368  INVGLSVSRVGSAAQLKAMKQVCGSSKLELAQYREVAAFAQFGSDLDAATQALLNRGARL 427

Query: 1357 TELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQALLKTIR 1536
            TE+ KQ QY P+ IE+Q+ VIYA V G+ D++    I+++EK  L+ +    Q   K+
Sbjct: 428  TEVPKQPQYEPLPIEKQIVVIYAAVNGFCDRMPLDRISQYEKAILSTINPELQ---KSFL 484

Query: 1537 EEGQIS----PQTDAQLKDVVVNFL 1599
            E+G ++     + DA LK+  + +L
Sbjct: 485  EKGGLTNERKMEPDASLKESTLPYL 509


>gi|231585|sp|Q01915|ATP0_SOYBN ATP synthase alpha chain,
            mitochondrial
 gi|418790|pir||S29792 H+-transporting two-sector ATPase (EC 3.6.3.14)
            alpha chain - soybean mitochondrion
 gi|22739|emb|CAA78407.1| atpA [Glycine max]
          Length = 508

 Score =  654 bits (1687), Expect = 0.0
 Identities = 336/477 (70%), Positives = 395/477 (82%), Gaps = 1/477 (0%)
 Frame = +1

Query: 100  SEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMN 279
            +E++ +LE RI    T   ++E G+V+S+GDGIARVYGL  IQA EMVEF SG+KG+A+N
Sbjct: 8    AELTTLLESRITNFYTNFQVDEIGRVVSVGDGIARVYGLNEIQAGEMVEFASGVKGIALN 67

Query: 280  LXXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANAR 459
            L               I+EGD+VKRTG+IVDVP G  +LGRVVDALG PIDG+G +++
Sbjct: 68   LENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE 127

Query: 460  RSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIIN 639
            R RVEVKAPGII R SV EPM TG+KAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTI+N
Sbjct: 128  RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILN 187

Query: 640  QKRFND-AGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQF 816
            QK+ N  A  + + L+C+YVA+GQKRSTVAQ+V+ L++A A++Y+I+V+ATASD APLQF
Sbjct: 188  QKQMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQF 247

Query: 817  LAPYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSR 996
            LAPYSGCAMGE+FRDNG HALII+DDLSKQAVAYRQMSLLLRRPPGREA+PGDVFYLHSR
Sbjct: 248  LAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSR 307

Query: 997  LLERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPA 1176
            LLERAAK ++  G GSLTALPVIETQAGDVSAYIPTNVISITDGQI LETELFY+G+RPA
Sbjct: 308  LLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPA 367

Query: 1177 INVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRL 1356
            INVGLSVSRVGSAAQ KAMKQV GS+KLELAQYREVAAFAQFGSDLDA+TQ LLNRG RL
Sbjct: 368  INVGLSVSRVGSAAQLKAMKQVCGSLKLELAQYREVAAFAQFGSDLDAATQALLNRGARL 427

Query: 1357 TELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQALLK 1527
            TE+LKQ QY P+ IE+Q+ VIYA V G+ D++    I ++E++ L  ++      LK
Sbjct: 428  TEVLKQPQYAPLPIEKQILVIYAAVNGFCDRMPLDKIPQYERDILTTIKPELLQSLK 484


>gi|50261318|ref|YP_052891.1| ATP synthase F1 subunit alpha
            [Saprolegnia ferax]
 gi|48237631|gb|AAT40680.1| ATP synthase F1 subunit alpha [Saprolegnia
            ferax]
          Length = 509

 Score =  654 bits (1687), Expect = 0.0
 Identities = 338/503 (67%), Positives = 410/503 (81%), Gaps = 1/503 (0%)
 Frame = +1

Query: 103  EVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSG-IKGMAMN 279
            E+S ILE  I   ++   LEETG VLS+ DGIAR YGL  IQA EMVEF+ G IKGMA+N
Sbjct: 4    ELSYILESNIKNFKSEKKLEETGIVLSMSDGIARCYGLTKIQAGEMVEFNKGNIKGMALN 63

Query: 280  LXXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANAR 459
            L               I+EG+ VKRTG+IV VP G+GLLGRVVDALG PIDGKG I +
Sbjct: 64   LEPDVVGVVVFSNEREIQEGNFVKRTGSIVSVPTGEGLLGRVVDALGQPIDGKGAIKSNT 123

Query: 460  RSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIIN 639
             SRVE+KAPGI+PR SV EP+ TG+KAVDSL+PIGRGQRELIIGDRQTGKT+IA+DTIIN
Sbjct: 124  LSRVEIKAPGIMPRQSVSEPVQTGLKAVDSLIPIGRGQRELIIGDRQTGKTSIAMDTIIN 183

Query: 640  QKRFNDAGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQFL 819
            Q + + +GD   +LFCIYVAVGQKRSTVA + K L +  A+ ++I+V+ATASD+APLQFL
Sbjct: 184  QVKAHQSGDKDNQLFCIYVAVGQKRSTVADLTKTLEEKNALFFSIIVAATASDSAPLQFL 243

Query: 820  APYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL 999
            APY+GC +GE+FRDNGKHA+I +DDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL
Sbjct: 244  APYTGCTLGEYFRDNGKHAVIFYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL 303

Query: 1000 LERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPAI 1179
            LERAAKMN ++GGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELF +G RPAI
Sbjct: 304  LERAAKMNIAIGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFNQGQRPAI 363

Query: 1180 NVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRLT 1359
            +VGLSVSRVGS+AQ KAMKQ+AGSMKLELAQ+REV AF+QFGSDLDA+TQQ L+RGVRLT
Sbjct: 364  SVGLSVSRVGSSAQIKAMKQIAGSMKLELAQFREVQAFSQFGSDLDAATQQQLHRGVRLT 423

Query: 1360 ELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQALLKTIRE 1539
            E+LKQG  VP+ +E+Q+ +I+ GV+G+LDK++   I +FE  +L  ++++   +L  I
Sbjct: 424  EMLKQGLNVPLNVEDQIVIIFLGVRGFLDKIEVKKIGQFENAWLQFIKNNHNDILVEIAT 483

Query: 1540 EGQISPQTDAQLKDVVVNFLATF 1608
            + +IS + +A+L+ +  +F + F
Sbjct: 484  KKEISKELEAKLRTLANDFTSQF 506


>gi|50428171|ref|XP_459057.1| unnamed protein product [Debaryomyces
            hansenii]
 gi|49654724|emb|CAG87225.1| unnamed protein product [Debaryomyces
            hansenii CBS767]
          Length = 503

 Score =  652 bits (1683), Expect = 0.0
 Identities = 326/473 (68%), Positives = 392/473 (81%)
 Frame = +1

Query: 190  DGIARVYGLKNIQAEEMVEFDSGIKGMAMNLXXXXXXXXXXXXXXXIREGDIVKRTGAIV 369
            DGIARV+GL N QA E+VEF SG+KGMA+NL               ++EG+ VKRTG IV
Sbjct: 31   DGIARVFGLNNCQASELVEFTSGVKGMALNLEAGQVGIVLFGSDRAVKEGETVKRTGKIV 90

Query: 370  DVPVGDGLLGRVVDALGNPIDGKGPIANARRSRVEVKAPGIIPRLSVREPMVTGVKAVDS 549
            +VP G  LLGRVVD LGNPIDGKGP+  +  S+ EVKAPGI+PR SV EPM TG+K+VD+
Sbjct: 91   EVPTGPELLGRVVDGLGNPIDGKGPLNASSTSKAEVKAPGILPRTSVFEPMQTGLKSVDA 150

Query: 550  LVPIGRGQRELIIGDRQTGKTAIAIDTIINQKRFNDAGDDKKKLFCIYVAVGQKRSTVAQ 729
            LVP+GRGQRELIIGDRQTGKT +A+DTI+NQKR+ND  D+ KKL+C+YVA+GQKRSTVAQ
Sbjct: 151  LVPVGRGQRELIIGDRQTGKTTVALDTILNQKRWNDGKDESKKLYCVYVAIGQKRSTVAQ 210

Query: 730  IVKRLTDAGAMDYTIVVSATASDAAPLQFLAPYSGCAMGEHFRDNGKHALIIFDDLSKQA 909
            +V+ L    A+ Y+I+V+ATAS+AAPLQFLAP++ CA+GE FRDNG+HA+I +DDLSKQA
Sbjct: 211  LVQTLEQNDALKYSIIVAATASEAAPLQFLAPFTACAIGEWFRDNGRHAMITYDDLSKQA 270

Query: 910  VAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNNSLGGGSLTALPVIETQAGDVS 1089
            VAYRQ+SLLLRRPPGREAYPGDVFYLHSRLLERAAKM+++ GGGSLTALP+IETQ GDVS
Sbjct: 271  VAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDANGGGSLTALPIIETQGGDVS 330

Query: 1090 AYIPTNVISITDGQIFLETELFYKGVRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELA 1269
            AYIPTNVISITDGQIFLE ELFYKG+RPAINVGLSVSRVGSAAQ KAMKQVAGS+KL LA
Sbjct: 331  AYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVKAMKQVAGSLKLYLA 390

Query: 1270 QYREVAAFAQFGSDLDASTQQLLNRGVRLTELLKQGQYVPMGIEEQVGVIYAGVKGYLDK 1449
            QYREVAAFAQFGSDLDAST+Q LNRG RLT +LKQ Q  P+  EEQV +IYAGV G+LD+
Sbjct: 391  QYREVAAFAQFGSDLDASTKQTLNRGERLTNILKQKQGSPLAAEEQVPLIYAGVNGFLDE 450

Query: 1450 VDPSAITKFEKEFLAHLRSSQQALLKTIREEGQISPQTDAQLKDVVVNFLATF 1608
            V    + +FE+ F +HL+S+   +L  IRE+G++S +   +L+    +F+A+F
Sbjct: 451  VALDRLAEFEESFASHLKSNDSDILDAIREKGELSKELLEKLRSTTESFVASF 503


>gi|114411|sp|P24459|ATP0_PHAVU ATP synthase alpha chain,
            mitochondrial
 gi|320126|pir||S26979 H+-transporting two-sector ATPase (EC 3.6.3.14)
            alpha chain - kidney bean mitochondrion
 gi|169318|gb|AAB01582.1| adenosine triphosphatase
          Length = 508

 Score =  651 bits (1680), Expect = 0.0
 Identities = 334/477 (70%), Positives = 394/477 (82%), Gaps = 1/477 (0%)
 Frame = +1

Query: 100  SEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMN 279
            +E++ +LE R+    T   ++E G+V+S+GDGIARVYGL  IQA EMVEF SG+KG+A+N
Sbjct: 8    AELTTLLESRMTNFYTNFQVDEIGRVVSVGDGIARVYGLNEIQAGEMVEFASGVKGIALN 67

Query: 280  LXXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANAR 459
            L               I+EGD+VKRTG+IVDVP G  +LGRVVDALG PIDG+G +++
Sbjct: 68   LENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE 127

Query: 460  RSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIIN 639
            R RVEVKAPGII R SV EPM TG+KAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTI+N
Sbjct: 128  RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILN 187

Query: 640  QKRFND-AGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQF 816
            QK+ N  A  + + L+C+YVA+GQKRSTVAQ+V+ L++A A++Y+I+V+ATASD APLQF
Sbjct: 188  QKQMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQF 247

Query: 817  LAPYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSR 996
            LAPYSGCAMGE+FRDNG HALII+DDLSKQAVAYRQMSLLLRRPPGREA+PGDVFYLHSR
Sbjct: 248  LAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSR 307

Query: 997  LLERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPA 1176
            LLERAAK ++  G GSLTALPVIETQAGDVSAYIPTNVISITDGQI LETELFY+G+RPA
Sbjct: 308  LLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPA 367

Query: 1177 INVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRL 1356
            INVGLSVSRVGSAAQ KAMKQ  GS+KLELAQYREVAAFAQFGSDLDA+TQ LLNRG RL
Sbjct: 368  INVGLSVSRVGSAAQLKAMKQACGSLKLELAQYREVAAFAQFGSDLDAATQALLNRGARL 427

Query: 1357 TELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQALLK 1527
            TE+LKQ QY P+ IE+Q+ VIYA V G+ D++    I ++E++ L  ++      LK
Sbjct: 428  TEVLKQPQYAPLPIEKQILVIYAAVNGFCDRMPLDKIPQYERDILTTIKPELLQSLK 484


>gi|114419|sp|P12862|ATP0_WHEAT ATP synthase alpha chain,
            mitochondrial
 gi|67820|pir||PWWTAM H+-transporting two-sector ATPase (EC 3.6.3.14)
            alpha chain - wheat mitochondrion
          Length = 509

 Score =  650 bits (1678), Expect = 0.0
 Identities = 339/505 (67%), Positives = 408/505 (80%), Gaps = 5/505 (0%)
 Frame = +1

Query: 100  SEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMN 279
            +E++ +LE R+    T   ++E G+V+S+GDGIARVYGL  IQA EMVEF SG+KG+A+N
Sbjct: 8    AELTTLLESRMTNFYTNFQVDEIGRVVSVGDGIARVYGLNEIQAGEMVEFASGVKGIALN 67

Query: 280  LXXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANAR 459
            L               I+EGD+VKRTG+IVDVP G  +LGRVVDALG PIDGKG +++
Sbjct: 68   LENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGKGALSDHE 127

Query: 460  RSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIIN 639
            R RVEVKAPGII R SV EPM TG+KAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTI+N
Sbjct: 128  RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILN 187

Query: 640  QKRFNDAG-DDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQF 816
            QK+ N  G ++ + L+C+YVA+GQKRSTVAQ+V+ L++A A++Y+I+V+ATASD APLQF
Sbjct: 188  QKQMNSRGTNESETLYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQF 247

Query: 817  LAPYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSR 996
            LAPYSGCAMGE+FRDNG HALII+DDLSKQAVAYRQMSLLLRRPPGREA+PGDVFYLHSR
Sbjct: 248  LAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSR 307

Query: 997  LLERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPA 1176
            LLERAAK ++  G GS TALPVIETQAGDVSAYIPTNVISITDGQI LET++FY+G+RPA
Sbjct: 308  LLERAAKRSDQTGAGSSTALPVIETQAGDVSAYIPTNVISITDGQICLETDVFYRGIRPA 367

Query: 1177 INVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRL 1356
            INVGLSVSRVGSAAQ KAMKQV GS KLELAQYREVAAFAQFGSDLDA++Q LLNRG RL
Sbjct: 368  INVGLSVSRVGSAAQLKAMKQVCGSSKLELAQYREVAAFAQFGSDLDAASQALLNRGARL 427

Query: 1357 TELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQALLKTIR 1536
            TE+ KQ QY P+ IE+Q+ VIYA V G+ D++    I+++EK  L+ +    Q   K+
Sbjct: 428  TEVPKQPQYEPLPIEKQIVVIYAAVNGFCDRMPLDRISQYEKAILSTINPELQ---KSFL 484

Query: 1537 EEGQIS----PQTDAQLKDVVVNFL 1599
            E+G ++     + DA LK+  + +L
Sbjct: 485  EKGGLTNERKMEPDASLKESTLPYL 509


>gi|7436068|pir||T08113 H+-transporting two-sector ATPase (EC
            3.6.3.14) alpha chain precursor, mitochondrial -
            Chlamydomonas reinhardtii
 gi|1495363|emb|CAA63864.1| H(+)-transporting ATP synthase
            [Chlamydomonas reinhardtii]
          Length = 569

 Score =  650 bits (1677), Expect = 0.0
 Identities = 332/475 (69%), Positives = 388/475 (80%)
 Frame = +1

Query: 169  GKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMNLXXXXXXXXXXXXXXXIREGDIV 348
            G+VLS+GDGIARVYGLK++QA E+V FDSG+KGMA+NL               I +GD+V
Sbjct: 92   GRVLSVGDGIARVYGLKSVQAGELVCFDSGVKGMALNLQADHVGVVVFGNDSLIHQGDLV 151

Query: 349  KRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANARRSRVEVKAPGIIPRLSVREPMVT 528
             RTG IV+VPVG G LGRVVDALG PIDGKGP+ N R S VE+KAPGII R SVREP+ T
Sbjct: 152  YRTGQIVNVPVGPGTLGRVVDALGQPIDGKGPLTNVRSSLVEIKAPGIIARQSVREPLYT 211

Query: 529  GVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIINQKRFNDAGDDKKKLFCIYVAVGQ 708
            GVKAVD+LVPIGRGQRELIIGDRQTGKTA+A+D I++Q   N   + K +++C+YVA+GQ
Sbjct: 212  GVKAVDALVPIGRGQRELIIGDRQTGKTAVALDCILHQNYLNGLTNKKNRVYCVYVAIGQ 271

Query: 709  KRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQFLAPYSGCAMGEHFRDNGKHALIIF 888
            KRSTVA +VK     GA+ YTI+VSATASDAAPLQFLAPYSGCAM E+FRD GKHA+II+
Sbjct: 272  KRSTVANLVKLFAQTGALKYTIIVSATASDAAPLQFLAPYSGCAMAEYFRDTGKHAVIIY 331

Query: 889  DDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNNSLGGGSLTALPVIE 1068
            DDLSKQ+VAYRQMSLLLRRPPGREA+PGDVFYLHSRLLERAAK++ ++GGGSLTA PVIE
Sbjct: 332  DDLSKQSVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKLSAAMGGGSLTAFPVIE 391

Query: 1069 TQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPAINVGLSVSRVGSAAQTKAMKQVAG 1248
            TQAGDVSAYI TNVISITDGQIFLETELFYKG+RPA+NVGLSVSRVGSAAQ   MKQVAG
Sbjct: 392  TQAGDVSAYIATNVISITDGQIFLETELFYKGIRPALNVGLSVSRVGSAAQFPGMKQVAG 451

Query: 1249 SMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRLTELLKQGQYVPMGIEEQVGVIYAG 1428
            ++KLELAQYREVAAFAQFGSDLDA+TQ +L RG RLTE+LKQ Q+VPM IE+Q  V+YA
Sbjct: 452  TLKLELAQYREVAAFAQFGSDLDAATQYVLERGARLTEVLKQKQFVPMPIEQQTIVVYAA 511

Query: 1429 VKGYLDKVDPSAITKFEKEFLAHLRSSQQALLKTIREEGQISPQTDAQLKDVVVN 1593
             KGYLDKV  + IT  E   L H+      L K ++ +G+I+P+ +A L   + N
Sbjct: 512  TKGYLDKVPVNQITACEDVILKHV---DPRLFKILKAKGKITPEINAHLAQQMSN 563


>gi|9838493|ref|NP_064105.1| ATPase subunit 1 [Beta vulgaris subsp.
            vulgaris]
 gi|543865|sp|Q06735|ATP0_BETVU ATP synthase alpha chain,
            mitochondrial
 gi|421791|pir||S33922 H+-transporting two-sector ATPase (EC 3.6.3.14)
            alpha chain - sugar beet mitochondrion
 gi|285632|dbj|BAA03664.1| F1-ATPase alpha subunit [Beta vulgaris]
 gi|9087355|dbj|BAA99499.1| ATPase subunit 1 [Beta vulgaris subsp.
            vulgaris]
          Length = 506

 Score =  649 bits (1674), Expect = 0.0
 Identities = 340/502 (67%), Positives = 406/502 (80%), Gaps = 3/502 (0%)
 Frame = +1

Query: 100  SEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMN 279
            +E++ +LE RI    T   ++E G+V+S+GDGIARVYGL  IQA EMVEF SG+KG+A+N
Sbjct: 8    AELTNLLESRITNFYTNFQVDEIGRVVSVGDGIARVYGLNEIQAGEMVEFASGVKGIALN 67

Query: 280  LXXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANAR 459
            L               I+EGD+VKRTG+IVDVP G  +LGRVVDALG PIDG+G +++
Sbjct: 68   LENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE 127

Query: 460  RSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIIN 639
            R RVEVKAPGII R SV EPM TG+KAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTI+N
Sbjct: 128  RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILN 187

Query: 640  QKRFND-AGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQF 816
            QK+ N  A  + + L+C+YVAVGQKRSTVAQ+V+ L++A A++Y+I+V+ATASD APLQF
Sbjct: 188  QKQLNSKATSESETLYCVYVAVGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQF 247

Query: 817  LAPYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSR 996
            LAPYSGCAMGE+FRDNG HALII+DDLSKQAVAYRQMSLLLRRPPGREA+PGDVFYLHSR
Sbjct: 248  LAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSR 307

Query: 997  LLERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPA 1176
            LLERAAK ++  G GSLTALPVIETQAGDVSAYIPTNVISITDGQI LETELFY+G+RPA
Sbjct: 308  LLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPA 367

Query: 1177 INVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRL 1356
            INVGLSVSRVGSAAQ KAMKQV GS KLELAQYREVAAFAQFGSDLDA+TQ LLNRG RL
Sbjct: 368  INVGLSVSRVGSAAQLKAMKQVCGSPKLELAQYREVAAFAQFGSDLDAATQALLNRGARL 427

Query: 1357 TELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQALLKTIR 1536
            TE+ KQ QY P+ IE+Q+ VIYA V G+ D++    I+++E+       S +  LL++++
Sbjct: 428  TEVPKQPQYAPLPIEKQILVIYAAVNGFCDRMPLDKISQYERTI---PNSVKPELLQSLK 484

Query: 1537 E--EGQISPQTDAQLKDVVVNF 1596
                 +   + D+ LK+  +N+
Sbjct: 485  GGLTNEKKMELDSFLKECALNY 506


>gi|44964389|gb|AAS49522.1| mitochondrial ATP synthase H+ transporting
            F1 complex alpha subunit isoform 1 [Latimeria chalumnae]
          Length = 394

 Score =  648 bits (1671), Expect = 0.0
 Identities = 331/393 (84%), Positives = 360/393 (91%)
 Frame = +1

Query: 205  VYGLKNIQAEEMVEFDSGIKGMAMNLXXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVG 384
            VYGL+N+QAEEMVEF SG+KGM++NL               I+EGDIVKRTGAIVDVPVG
Sbjct: 1    VYGLRNVQAEEMVEFSSGLKGMSLNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVG 60

Query: 385  DGLLGRVVDALGNPIDGKGPIANARRSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIG 564
            + LLGRVVDALGN IDGKGPI    R RV +KAPGIIPR+SVREPM TGVKAVDSLVPIG
Sbjct: 61   EELLGRVVDALGNAIDGKGPIPAKIRRRVGLKAPGIIPRISVREPMQTGVKAVDSLVPIG 120

Query: 565  RGQRELIIGDRQTGKTAIAIDTIINQKRFNDAGDDKKKLFCIYVAVGQKRSTVAQIVKRL 744
            RGQRELIIGDRQTGKT++A+DTIINQKRFN+  D+KKKL+C+YVA+GQKRSTVAQ+VKRL
Sbjct: 121  RGQRELIIGDRQTGKTSLAVDTIINQKRFNEGTDEKKKLYCVYVAIGQKRSTVAQLVKRL 180

Query: 745  TDAGAMDYTIVVSATASDAAPLQFLAPYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQ 924
            T+A AM YTIVVSATASDAAPLQ+LAPYSGC+MGE+FRDN KHALII+DDLSKQAVAYRQ
Sbjct: 181  TNADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNSKHALIIYDDLSKQAVAYRQ 240

Query: 925  MSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPT 1104
            MSLL RRPPGREAYPGDVFYLHSRLLERAAKMN++ GGGSLTALPVIETQAGDVSAYIPT
Sbjct: 241  MSLLPRRPPGREAYPGDVFYLHSRLLERAAKMNDNFGGGSLTALPVIETQAGDVSAYIPT 300

Query: 1105 NVISITDGQIFLETELFYKGVRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREV 1284
            NVISITDGQIFLETELFYKG+RPAINVGLSVSRVGSAAQT+AMKQVAG+MKLELAQ+REV
Sbjct: 301  NVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTRAMKQVAGTMKLELAQFREV 360

Query: 1285 AAFAQFGSDLDASTQQLLNRGVRLTELLKQGQY 1383
            AAFAQF SDLDASTQQLLNRGVRLTELLKQGQY
Sbjct: 361  AAFAQFDSDLDASTQQLLNRGVRLTELLKQGQY 393


>gi|34581170|ref|ZP_00142650.1| ATP synthase alpha chain [Rickettsia
            sibirica]
 gi|28262555|gb|EAA26059.1| ATP synthase alpha chain [Rickettsia
            sibirica 246]
          Length = 510

 Score =  647 bits (1668), Expect = 0.0
 Identities = 322/502 (64%), Positives = 407/502 (80%)
 Frame = +1

Query: 103  EVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMNL 282
            EV++IL++ I        LEE G+V+++GDGIA++YGL N+++ E+VEF SG+KG+ +NL
Sbjct: 7    EVAEILQKEIANINCLSELEEVGQVITVGDGIAQIYGLANVKSGEVVEFKSGVKGLVLNL 66

Query: 283  XXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANARR 462
                           +++GD VKRT A+++VPVG+ LLGRVVDALGNPIDGKG IA+
Sbjct: 67   ENDSVGAVIMGDDNQVQQGDNVKRTKAVLEVPVGNALLGRVVDALGNPIDGKGDIASKEY 126

Query: 463  SRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIINQ 642
              +E+KAPGII R SV EP+ TG+KA+DSL+PIGRGQRELIIGDRQTGKTAIA+DTIINQ
Sbjct: 127  RHIEMKAPGIIERTSVSEPVQTGIKAIDSLIPIGRGQRELIIGDRQTGKTAIAVDTIINQ 186

Query: 643  KRFNDAGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQFLA 822
            K+ +   ++  K++CIYVA+GQKRS+VAQIVK+L DAGAMDYT++VSATAS+AA LQF+A
Sbjct: 187  KQAHSLTNESDKIYCIYVAIGQKRSSVAQIVKKLEDAGAMDYTLIVSATASEAAALQFIA 246

Query: 823  PYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLL 1002
            PYS C+MGE+FRDNG HALII+DDLSK AVAYRQ+SLLLRRPPGREAYPGDVFYLHSRLL
Sbjct: 247  PYSACSMGEYFRDNGMHALIIYDDLSKHAVAYRQISLLLRRPPGREAYPGDVFYLHSRLL 306

Query: 1003 ERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPAIN 1182
            ERAAKM+   G GSLTALP+IETQAGDVSAYIPTNVISITDGQIFLE+ELFYKGVRPA+N
Sbjct: 307  ERAAKMSEEKGSGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLESELFYKGVRPAVN 366

Query: 1183 VGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRLTE 1362
            VG+SVSRVGSAAQ KAMKQVAGS+KLELAQ+RE+ +F+QFGSDLD +T+  ++ G RL E
Sbjct: 367  VGISVSRVGSAAQIKAMKQVAGSVKLELAQFRELESFSQFGSDLDPATKAQIDHGKRLVE 426

Query: 1363 LLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQALLKTIREE 1542
            +LKQ QY P  +EEQ+  IY G K YL+ V    + +FE + L  +R +++ +L++I+ E
Sbjct: 427  ILKQAQYHPFPVEEQIVSIYVGTKKYLNDVPLQKVKEFEDKMLTEIRLNKKDILESIKNE 486

Query: 1543 GQISPQTDAQLKDVVVNFLATF 1608
             +I+ +T+ +LK  + NF+  F
Sbjct: 487  QRITEETEQKLKAFLENFVKEF 508


>gi|9695382|ref|NP_037604.1| ATP synthase F1 subunit alpha
            [Phytophthora infestans]
 gi|6692635|gb|AAF24778.1| ATP synthase F1 subunit alpha [Phytophthora
            infestans]
          Length = 509

 Score =  647 bits (1668), Expect = 0.0
 Identities = 334/503 (66%), Positives = 407/503 (80%), Gaps = 1/503 (0%)
 Frame = +1

Query: 103  EVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSG-IKGMAMN 279
            E+S ILE  I   +   +L+ETG VLS+ DGIAR YGL  IQA EMVEF++G IKGMA+N
Sbjct: 4    ELSYILESNIKKYKDEKSLQETGIVLSMSDGIARCYGLTKIQAGEMVEFNNGNIKGMALN 63

Query: 280  LXXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANAR 459
            L               I+EG+ V+RTG+IV VPVG  +LGRVVDALG PIDGKG I +
Sbjct: 64   LEPDVVGVVVFSNDREIQEGNFVRRTGSIVSVPVGPEVLGRVVDALGQPIDGKGQINSKL 123

Query: 460  RSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIIN 639
             SRVEVKAPGI+PR SV+EP+ TG+KAVDSL+PIGRGQRELIIGDRQTGKT+IAIDTIIN
Sbjct: 124  ESRVEVKAPGIMPRESVKEPVQTGLKAVDSLIPIGRGQRELIIGDRQTGKTSIAIDTIIN 183

Query: 640  QKRFNDAGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQFL 819
            Q+  +   D   +L+CIYV VGQKRST+A++ K L +  AM ++++V+ATASD+APLQ+L
Sbjct: 184  QREPHLKKDTNNQLYCIYVGVGQKRSTIAELTKTLEEKNAMFFSVIVAATASDSAPLQYL 243

Query: 820  APYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL 999
            APY+GCA+GE+FRDNGKHA+I +DDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL
Sbjct: 244  APYTGCALGEYFRDNGKHAVIFYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL 303

Query: 1000 LERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPAI 1179
            LERAAKMN  +GGGSLTALP+IETQAGDVSAYIPTNVISITDGQIFLETELF +G RPAI
Sbjct: 304  LERAAKMNRKIGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETELFNEGQRPAI 363

Query: 1180 NVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRLT 1359
            +VGLSVSRVGSAAQ KAMKQ+AG+MKLELAQ+REV AFAQFGSDLDA+TQQ LNRGVRLT
Sbjct: 364  SVGLSVSRVGSAAQIKAMKQIAGTMKLELAQFREVQAFAQFGSDLDATTQQQLNRGVRLT 423

Query: 1360 ELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQALLKTIRE 1539
            E+LKQG  +P+ +E+Q+ +IY GV+G+LDK+    I+ FE  +L  ++++   +L+ I
Sbjct: 424  EMLKQGLNIPLSVEDQIVIIYLGVRGFLDKIAVDKISIFETNWLNFIQNNHSDILEEILT 483

Query: 1540 EGQISPQTDAQLKDVVVNFLATF 1608
            + +IS + D +L  + ++F   F
Sbjct: 484  KKEISKELDKKLNTLAIDFTNNF 506


>gi|2118184|pir||S46508 H+-transporting two-sector ATPase (EC
            3.6.3.14) alpha chain - beet mitochondrion
          Length = 506

 Score =  646 bits (1667), Expect = 0.0
 Identities = 339/502 (67%), Positives = 405/502 (80%), Gaps = 3/502 (0%)
 Frame = +1

Query: 100  SEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMN 279
            +E++ +LE RI    T   ++E G+V+S+GDGIARVYGL  IQA EMVEF SG+KG+A+N
Sbjct: 8    AELTNLLESRITNFYTNFQVDEIGRVVSVGDGIARVYGLNEIQAGEMVEFASGVKGIALN 67

Query: 280  LXXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANAR 459
            L               I+EGD+VKRTG+IVDVP G  +LGRVVDALG PIDG+G +++
Sbjct: 68   LENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE 127

Query: 460  RSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIIN 639
            R RVEVKAPGII R SV EPM TG+KAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTI+N
Sbjct: 128  RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILN 187

Query: 640  QKRFND-AGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQF 816
            QK+ N  A  + + L+C+Y AVGQKRSTVAQ+V+ L++A A++Y+I+V+ATASD APLQF
Sbjct: 188  QKQLNSKATSESETLYCVYDAVGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQF 247

Query: 817  LAPYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSR 996
            LAPYSGCAMGE+FRDNG HALII+DDLSKQAVAYRQMSLLLRRPPGREA+PGDVFYLHSR
Sbjct: 248  LAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSR 307

Query: 997  LLERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPA 1176
            LLERAAK ++  G GSLTALPVIETQAGDVSAYIPTNVISITDGQI LETELFY+G+RPA
Sbjct: 308  LLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPA 367

Query: 1177 INVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRL 1356
            INVGLSVSRVGSAAQ KAMKQV GS KLELAQYREVAAFAQFGSDLDA+TQ LLNRG RL
Sbjct: 368  INVGLSVSRVGSAAQLKAMKQVCGSPKLELAQYREVAAFAQFGSDLDAATQALLNRGARL 427

Query: 1357 TELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQALLKTIR 1536
            TE+ KQ QY P+ IE+Q+ VIYA V G+ D++    I+++E+       S +  LL++++
Sbjct: 428  TEVPKQPQYAPLPIEKQILVIYAAVNGFCDRMPLDKISQYERTI---PNSVKPELLQSLK 484

Query: 1537 E--EGQISPQTDAQLKDVVVNF 1596
                 +   + D+ LK+  +N+
Sbjct: 485  GGLTNEKKMELDSFLKECALNY 506


>gi|20137393|sp|Q92G86|ATPA_RICCN ATP synthase alpha chain
          Length = 510

 Score =  646 bits (1666), Expect = 0.0
 Identities = 322/502 (64%), Positives = 406/502 (80%)
 Frame = +1

Query: 103  EVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMNL 282
            EV++IL++ I        LEE G+V+++GDGIA++YGL N+++ E+VEF SG+KG+ +NL
Sbjct: 7    EVAEILQKEIANINCLSELEEVGQVITVGDGIAQIYGLANVKSGEVVEFKSGVKGLVLNL 66

Query: 283  XXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANARR 462
                           +++GD VKRT A+++VPVG  LLGRVVDALGNPIDGKG IA+
Sbjct: 67   ENDSVGAVIMGDDNQVQQGDNVKRTKAVLEVPVGKALLGRVVDALGNPIDGKGDIASKEY 126

Query: 463  SRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIINQ 642
              +E+KAPGII R SV EP+ TG+KA+DSL+PIGRGQRELIIGDRQTGKTAIA+DTIINQ
Sbjct: 127  RHIEMKAPGIIERTSVSEPVQTGIKAIDSLIPIGRGQRELIIGDRQTGKTAIAVDTIINQ 186

Query: 643  KRFNDAGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQFLA 822
            K+ +   ++  K++CIYVA+GQKRS+VAQIVK+L DAGAMDYT++VSATAS+AA LQF+A
Sbjct: 187  KQAHSLTNESDKIYCIYVAIGQKRSSVAQIVKKLEDAGAMDYTLIVSATASEAAALQFIA 246

Query: 823  PYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLL 1002
            PYS C+MGE+FRDNG HALII+DDLSK AVAYRQ+SLLLRRPPGREAYPGDVFYLHSRLL
Sbjct: 247  PYSACSMGEYFRDNGMHALIIYDDLSKHAVAYRQISLLLRRPPGREAYPGDVFYLHSRLL 306

Query: 1003 ERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPAIN 1182
            ERAAKM+   G GSLTALP+IETQAGDVSAYIPTNVISITDGQIFLE+ELFYKGVRPA+N
Sbjct: 307  ERAAKMSEEKGSGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLESELFYKGVRPAVN 366

Query: 1183 VGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRLTE 1362
            VG+SVSRVGSAAQ KAMKQVAGS+KLELAQ+RE+ +F+QFGSDLD +T+  ++ G RL E
Sbjct: 367  VGISVSRVGSAAQIKAMKQVAGSVKLELAQFRELESFSQFGSDLDPATKAQIDHGKRLVE 426

Query: 1363 LLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQALLKTIREE 1542
            +LKQ QY P  +EEQ+  IY G K YL+ V    + +FE + L  +R +++ +L++I+ E
Sbjct: 427  ILKQAQYHPFPVEEQIVSIYVGTKKYLNDVPLQKVKEFEDKMLTEIRLNKKDILESIKNE 486

Query: 1543 GQISPQTDAQLKDVVVNFLATF 1608
             +I+ +T+ +LK  + NF+  F
Sbjct: 487  QRITEETEQKLKAFLENFVKEF 508


>gi|15893160|ref|NP_360874.1| ATP synthase alpha chain [EC:3.6.1.34]
            [Rickettsia conorii str. Malish 7]
 gi|25290465|pir||E97854 H+-transporting two-sector ATPase (EC
            3.6.3.14) - Rickettsia conorii (strain Malish 7)
 gi|15620371|gb|AAL03775.1| ATP synthase alpha chain [EC:3.6.1.34]
            [Rickettsia conorii str. Malish 7]
          Length = 533

 Score =  646 bits (1666), Expect = 0.0
 Identities = 322/502 (64%), Positives = 406/502 (80%)
 Frame = +1

Query: 103  EVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMNL 282
            EV++IL++ I        LEE G+V+++GDGIA++YGL N+++ E+VEF SG+KG+ +NL
Sbjct: 30   EVAEILQKEIANINCLSELEEVGQVITVGDGIAQIYGLANVKSGEVVEFKSGVKGLVLNL 89

Query: 283  XXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANARR 462
                           +++GD VKRT A+++VPVG  LLGRVVDALGNPIDGKG IA+
Sbjct: 90   ENDSVGAVIMGDDNQVQQGDNVKRTKAVLEVPVGKALLGRVVDALGNPIDGKGDIASKEY 149

Query: 463  SRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIINQ 642
              +E+KAPGII R SV EP+ TG+KA+DSL+PIGRGQRELIIGDRQTGKTAIA+DTIINQ
Sbjct: 150  RHIEMKAPGIIERTSVSEPVQTGIKAIDSLIPIGRGQRELIIGDRQTGKTAIAVDTIINQ 209

Query: 643  KRFNDAGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQFLA 822
            K+ +   ++  K++CIYVA+GQKRS+VAQIVK+L DAGAMDYT++VSATAS+AA LQF+A
Sbjct: 210  KQAHSLTNESDKIYCIYVAIGQKRSSVAQIVKKLEDAGAMDYTLIVSATASEAAALQFIA 269

Query: 823  PYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLL 1002
            PYS C+MGE+FRDNG HALII+DDLSK AVAYRQ+SLLLRRPPGREAYPGDVFYLHSRLL
Sbjct: 270  PYSACSMGEYFRDNGMHALIIYDDLSKHAVAYRQISLLLRRPPGREAYPGDVFYLHSRLL 329

Query: 1003 ERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPAIN 1182
            ERAAKM+   G GSLTALP+IETQAGDVSAYIPTNVISITDGQIFLE+ELFYKGVRPA+N
Sbjct: 330  ERAAKMSEEKGSGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLESELFYKGVRPAVN 389

Query: 1183 VGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRLTE 1362
            VG+SVSRVGSAAQ KAMKQVAGS+KLELAQ+RE+ +F+QFGSDLD +T+  ++ G RL E
Sbjct: 390  VGISVSRVGSAAQIKAMKQVAGSVKLELAQFRELESFSQFGSDLDPATKAQIDHGKRLVE 449

Query: 1363 LLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQALLKTIREE 1542
            +LKQ QY P  +EEQ+  IY G K YL+ V    + +FE + L  +R +++ +L++I+ E
Sbjct: 450  ILKQAQYHPFPVEEQIVSIYVGTKKYLNDVPLQKVKEFEDKMLTEIRLNKKDILESIKNE 509

Query: 1543 GQISPQTDAQLKDVVVNFLATF 1608
             +I+ +T+ +LK  + NF+  F
Sbjct: 510  QRITEETEQKLKAFLENFVKEF 531


>gi|114404|sp|P18260|ATP0_HELAN ATP synthase alpha chain,
            mitochondrial
 gi|100528|pir||S10997 H+-transporting two-sector ATPase (EC 3.6.3.14)
            alpha chain - common sunflower mitochondrion
 gi|12986|emb|CAA39428.1| F1 ATPase; adenosinetriphosphatase
            [Helianthus annuus]
 gi|12989|emb|CAA37022.1| unnamed protein product [Helianthus annuus]
 gi|758362|emb|CAA37613.1| F1 ATPase; adenosinetriphosphatase
            [Helianthus annuus]
          Length = 510

 Score =  645 bits (1665), Expect = 0.0
 Identities = 335/486 (68%), Positives = 398/486 (80%), Gaps = 1/486 (0%)
 Frame = +1

Query: 100  SEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMN 279
            +E++ +LE RI    T   ++E G+V+S+GDGIARVYGL  IQA EMVEF SG+KG+A+N
Sbjct: 8    AELTTLLESRISNFYTNFQVDEIGRVVSVGDGIARVYGLNEIQAGEMVEFASGVKGIALN 67

Query: 280  LXXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANAR 459
            L               I+EGD+VKRTG+IVDVP G  +LGRVVDALG PIDG+G +++
Sbjct: 68   LENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE 127

Query: 460  RSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIIN 639
            R RVEVKAPGII R SV EPM TG+KAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTI+N
Sbjct: 128  RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILN 187

Query: 640  QKRFNDAG-DDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQF 816
            QK+ N     + + L+C+YVA+GQKRSTVAQ+V+ L++A AM+Y+I+V+ATASD APLQF
Sbjct: 188  QKQMNSRSTSESETLYCVYVAIGQKRSTVAQLVQILSEANAMEYSILVAATASDPAPLQF 247

Query: 817  LAPYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSR 996
            LAPYSGCAMGE+FRDNG HALII+DDLSKQAVAYRQMSLLLRRPPGREA+PGDVFYLHSR
Sbjct: 248  LAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSR 307

Query: 997  LLERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPA 1176
            LLERAAK ++  G GSLTALPVIETQAGDVSAYIPTNVI ITDGQI  ETELFY+G+RPA
Sbjct: 308  LLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPA 367

Query: 1177 INVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRL 1356
            INVGLSVSRVGSAAQ K MKQV GS KLELAQYREVAA AQFGSDLDA+TQ LLNRG RL
Sbjct: 368  INVGLSVSRVGSAAQLKTMKQVCGSSKLELAQYREVAALAQFGSDLDAATQALLNRGARL 427

Query: 1357 TELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQALLKTIR 1536
            TE+ KQ QY P+ IE+Q+ VIYA V G+ D++    I+++E+   A L+S +  LL+++
Sbjct: 428  TEVPKQPQYAPLPIEKQILVIYAAVNGFCDRMPLDRISQYER---AILKSIKTELLQSLL 484

Query: 1537 EEGQIS 1554
            E+G ++
Sbjct: 485  EKGGLT 490


>gi|1421799|gb|AAB03873.1| F1-ATPase alpha subunit [Petunia axillaris
            subsp. parodii]
 gi|1421801|gb|AAB03874.1| F1-ATPase alpha subunit [Petunia axillaris
            subsp. parodii]
          Length = 509

 Score =  645 bits (1663), Expect = 0.0
 Identities = 339/505 (67%), Positives = 404/505 (79%), Gaps = 5/505 (0%)
 Frame = +1

Query: 100  SEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMN 279
            +E++ +LE RI    T   ++E G+V+S+GDGIARVYGL  IQA EMVEF SG+KG+A+N
Sbjct: 8    AELTSLLESRISNFYTNFQVDEIGRVVSVGDGIARVYGLNEIQAGEMVEFASGVKGIALN 67

Query: 280  LXXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANAR 459
            L               I+EGD+VKRTG+IVDVP G  +LGRVVD LG PIDGKG +++
Sbjct: 68   LENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDGLGLPIDGKGALSDHE 127

Query: 460  RSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIIN 639
            R RVEVKAPGII R SV EPM TG+KAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTI+N
Sbjct: 128  RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILN 187

Query: 640  QKRFND-AGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQF 816
            QK+ N  A  + + L+C+YVA+GQKRSTVAQ+V+ L++A A++Y+I+V+ATASD APLQF
Sbjct: 188  QKQLNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQF 247

Query: 817  LAPYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSR 996
            LAPYSGCAMGE+FRDNG HALII+DDLSKQAVAYRQMSLLLRRPPGREA+PGDVFYLHSR
Sbjct: 248  LAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSR 307

Query: 997  LLERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPA 1176
            LLERAAK ++  G GSLTALPVIETQAGDVSAYIPTNVI ITDGQI LETELFY+G+RPA
Sbjct: 308  LLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPA 367

Query: 1177 INVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRL 1356
            INVGLSVSRVGSAAQ K MKQV GS KLELAQYREVAA AQFGSDLDA+TQ LLNRG RL
Sbjct: 368  INVGLSVSRVGSAAQLKTMKQVCGSSKLELAQYREVAALAQFGSDLDAATQALLNRGARL 427

Query: 1357 TELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQALLKTIR 1536
            TE+ KQ QY P+ IE+Q+ VIYA V G+ D++    I+++E+   A   S +  LL++
Sbjct: 428  TEVPKQPQYAPLPIEKQILVIYAAVNGFCDRMPLDRISQYER---AIPNSVKPELLQSFL 484

Query: 1537 EEGQIS----PQTDAQLKDVVVNFL 1599
            E+G ++     + D  LK+  + F+
Sbjct: 485  EKGGLTNERKMEPDTFLKESALAFI 509


>gi|100529|pir||S19261 H+-transporting two-sector ATPase (EC 3.6.3.14)
            alpha chain - common sunflower mitochondrion
          Length = 510

 Score =  644 bits (1660), Expect = 0.0
 Identities = 334/486 (68%), Positives = 397/486 (80%), Gaps = 1/486 (0%)
 Frame = +1

Query: 100  SEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMN 279
            +E++ +LE RI    T   ++E G+V+S+GDGIARVYGL  IQA EMVEF SG+KG+A+N
Sbjct: 8    AELTTLLESRISNFYTNFQVDEIGRVVSVGDGIARVYGLNEIQAGEMVEFASGVKGIALN 67

Query: 280  LXXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANAR 459
            L               I+EGD+VKRTG+IVDVP G  +LGRVVDALG PIDG+G +++
Sbjct: 68   LENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE 127

Query: 460  RSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIIN 639
            R RVEVKAPGII R SV EPM TG+KAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTI+N
Sbjct: 128  RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILN 187

Query: 640  QKRFNDAG-DDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQF 816
            QK+ N     + + L+C+YVA+GQKRSTVAQ+V+ L++A  M+Y+I+V+ATASD APLQF
Sbjct: 188  QKQMNSRSTSESETLYCVYVAIGQKRSTVAQLVQILSEANLMEYSILVAATASDPAPLQF 247

Query: 817  LAPYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSR 996
            LAPYSGCAMGE+FRDNG HALII+DDLSKQAVAYRQMSLLLRRPPGREA+PGDVFYLHSR
Sbjct: 248  LAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSR 307

Query: 997  LLERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPA 1176
            LLERAAK ++  G GSLTALPVIETQAGDVSAYIPTNVI ITDGQI  ETELFY+G+RPA
Sbjct: 308  LLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPA 367

Query: 1177 INVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRL 1356
            INVGLSVSRVGSAAQ K MKQV GS KLELAQYREVAA AQFGSDLDA+TQ LLNRG RL
Sbjct: 368  INVGLSVSRVGSAAQLKTMKQVCGSSKLELAQYREVAALAQFGSDLDAATQALLNRGARL 427

Query: 1357 TELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQALLKTIR 1536
            TE+ KQ QY P+ IE+Q+ VIYA V G+ D++    I+++E+   A L+S +  LL+++
Sbjct: 428  TEVPKQPQYAPLPIEKQILVIYAAVNGFCDRMPLDRISQYER---AILKSIKTELLQSLL 484

Query: 1537 EEGQIS 1554
            E+G ++
Sbjct: 485  EKGGLT 490


>gi|114407|sp|P05495|ATP0_NICPL ATP synthase alpha chain,
            mitochondrial
 gi|67819|pir||PWNTAC H+-transporting two-sector ATPase (EC 3.6.3.14)
            alpha chain - curled-leaved tobacco mitochondrion
 gi|13153|emb|CAA30568.1| unnamed protein product [Nicotiana
            plumbaginifolia]
          Length = 509

 Score =  644 bits (1660), Expect = 0.0
 Identities = 338/505 (66%), Positives = 404/505 (79%), Gaps = 5/505 (0%)
 Frame = +1

Query: 100  SEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMN 279
            +E++ +LE RI    T   ++E G+V+S+GDGIARVYGL  IQA EMVEF SG+KG+A+N
Sbjct: 8    AELTSLLESRISNFYTNFQVDEIGRVVSVGDGIARVYGLNEIQAGEMVEFASGVKGIALN 67

Query: 280  LXXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANAR 459
            L               I+EGD+VKRTG+IVDVP G  +LGRVVD LG PIDG+G +++
Sbjct: 68   LENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDGLGVPIDGRGALSDHE 127

Query: 460  RSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIIN 639
            R RVEVKAPGII R SV EPM TG+KAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTI+N
Sbjct: 128  RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILN 187

Query: 640  QKRFND-AGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQF 816
            QK+ N  A  + + L+C+YVA+GQKRSTVAQ+V+ L++A A++Y+I+V+ATASD APLQF
Sbjct: 188  QKQLNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQF 247

Query: 817  LAPYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSR 996
            LAPYSGCAMGE+FRDNG HALII+DDLSKQAVAYRQMSLLLRRPPGREA+PGDVFYLHSR
Sbjct: 248  LAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSR 307

Query: 997  LLERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPA 1176
            LLERAAK ++  G GSLTALPVIETQAGDVSAYIPTNVI ITDGQI LETELFY+G+RPA
Sbjct: 308  LLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPA 367

Query: 1177 INVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRL 1356
            INVGLSVSRVGSAAQ K MKQV GS KLELAQYREVAA AQFGSDLDA+TQ LLNRG RL
Sbjct: 368  INVGLSVSRVGSAAQLKTMKQVCGSSKLELAQYREVAALAQFGSDLDAATQALLNRGARL 427

Query: 1357 TELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQALLKTIR 1536
            TE+ KQ QY P+ IE+Q+ VIYA V G+ D++    I+++E+   A   S +  LL++
Sbjct: 428  TEVPKQPQYAPLPIEKQILVIYAAVNGFCDRMPLDRISQYER---AIPNSVKPELLQSFL 484

Query: 1537 EEGQIS----PQTDAQLKDVVVNFL 1599
            E+G ++     + D  LK+  + F+
Sbjct: 485  EKGGLTNERKMEPDTFLKESALAFI 509


>gi|2645893|gb|AAB87529.1| F1 ATPase a-subunit [Panax ginseng]
          Length = 507

 Score =  643 bits (1658), Expect = 0.0
 Identities = 336/497 (67%), Positives = 402/497 (80%), Gaps = 3/497 (0%)
 Frame = +1

Query: 100  SEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMN 279
            +E++ +LE RI    T   ++E G+V+S+GDGIARVYGL  IQA EMVEF SG+KG+A+N
Sbjct: 8    AELTTLLESRISNFYTHFQVDEIGRVVSVGDGIARVYGLNEIQAGEMVEFASGVKGIALN 67

Query: 280  LXXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANAR 459
            L               I+EGD+VKRTG+IVDVP G  +LGRVVDALG PIDG+G +++
Sbjct: 68   LENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE 127

Query: 460  RSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIIN 639
            R RVEVKAPGII R SV EPM TG+KAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTI+N
Sbjct: 128  RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILN 187

Query: 640  QKRFNDAG-DDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQF 816
            QK+ N     + + L+C+YVA+GQKRSTVAQ+V+ L++A A++Y+I+V+ATASD APLQF
Sbjct: 188  QKQMNSRSTSESETLYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQF 247

Query: 817  LAPYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSR 996
            LAPYSGCAMGE+FRDNG HALII+DDLSKQAVAYRQMSLLLRRPPGREA+PGDVFYLHSR
Sbjct: 248  LAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSR 307

Query: 997  LLERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPA 1176
            LLERAAK ++  G GSLTALPVIETQAGDVSAYIPTNVI ITDGQI  ETELFY+G+RPA
Sbjct: 308  LLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPA 367

Query: 1177 INVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRL 1356
            INVGLSVSRVGSAAQ KAMKQV GS KLELAQYREVAA AQFGSDLDA+TQ LLNRG RL
Sbjct: 368  INVGLSVSRVGSAAQLKAMKQVCGSSKLELAQYREVAALAQFGSDLDAATQALLNRGARL 427

Query: 1357 TELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQALLKTIR 1536
            TE+ KQ QY P+ IE+Q+ VIYA V G+ D++    I+++E+   + ++     LL+++
Sbjct: 428  TEVPKQPQYAPLPIEKQILVIYAAVNGFCDRMPLDRISQYERAIPSSIKPE---LLQSLL 484

Query: 1537 EEGQI--SPQTDAQLKD 1581
            E+G +    + DA LK+
Sbjct: 485  EKGGLERKMEPDAFLKE 501


>gi|48833095|ref|ZP_00290119.1| COG0056: F0F1-type ATP synthase, alpha
            subunit [Magnetococcus sp. MC-1]
          Length = 507

 Score =  642 bits (1655), Expect = 0.0
 Identities = 327/505 (64%), Positives = 393/505 (77%)
 Frame = +1

Query: 94   SGSEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMA 273
            S +E+S IL+++I        + E G+V+++GDGIAR YGL N+ A EMVEF+ G +GMA
Sbjct: 4    SVAEISGILKKQIAEYGKEAEVSEVGEVIAVGDGIARAYGLDNVMAGEMVEFEDGTQGMA 63

Query: 274  MNLXXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIAN 453
            +NL               I+EG  VKRTG IVDVPVG GLLGRV D LGNPID KGP+
Sbjct: 64   LNLEEDNVGIVIFGEGLAIKEGTTVKRTGRIVDVPVGKGLLGRVTDGLGNPIDDKGPLET 123

Query: 454  ARRSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTI 633
              R   EVKAPGIIPR SV EP+ TG+KA+D LVPIGRGQRELIIGDRQTGKTA+AIDTI
Sbjct: 124  TERRLAEVKAPGIIPRKSVHEPLHTGIKALDGLVPIGRGQRELIIGDRQTGKTAVAIDTI 183

Query: 634  INQKRFNDAGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQ 813
            INQKR ++       ++CIYVA+GQKRSTVAQ+V+ L + GAM YT VV+ATASD AP+Q
Sbjct: 184  INQKRTHETDSP---VYCIYVAIGQKRSTVAQVVQTLEENGAMAYTTVVAATASDPAPMQ 240

Query: 814  FLAPYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHS 993
            FL+ Y+GCAMGE++RDNG HALI++DDLSKQA AYRQMSL+LRRPPGREAYPGDVFY+HS
Sbjct: 241  FLSAYTGCAMGEYYRDNGMHALIVYDDLSKQATAYRQMSLILRRPPGREAYPGDVFYIHS 300

Query: 994  RLLERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRP 1173
            RLLERAAKMN+  GGGSLTALP+IETQ GDVSAYIPTNVISITDGQIFLET+LFY G+RP
Sbjct: 301  RLLERAAKMNDEHGGGSLTALPIIETQDGDVSAYIPTNVISITDGQIFLETDLFYSGIRP 360

Query: 1174 AINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVR 1353
            AI+VGLSVSRVG +AQ KA KQVAG+++L+LAQYRE+AAFAQFGSDLDA+TQ+LL+RG R
Sbjct: 361  AISVGLSVSRVGGSAQVKATKQVAGTLRLDLAQYREMAAFAQFGSDLDATTQKLLHRGKR 420

Query: 1354 LTELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQALLKTI 1533
            L ELLKQ QY P+ +EEQV  I+AG +G+LD VD  A+ K E E L  + +    LL TI
Sbjct: 421  LMELLKQAQYAPLSMEEQVVSIFAGTRGFLDVVDADAVVKAELELLKQMHAKHSDLLDTI 480

Query: 1534 REEGQISPQTDAQLKDVVVNFLATF 1608
            R  G++   T+ +L   +   +  F
Sbjct: 481  RTSGKLDADTETKLGVAITAIIKEF 505


>gi|11263|emb|CAA48649.1| ATPase subunit [Beta vulgaris subsp.
            vulgaris]
 gi|396760|emb|CAA48650.1| ATPase subunit [Beta vulgaris subsp.
            vulgaris]
          Length = 506

 Score =  641 bits (1654), Expect = 0.0
 Identities = 336/502 (66%), Positives = 403/502 (79%), Gaps = 3/502 (0%)
 Frame = +1

Query: 100  SEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMN 279
            +E++ +LE RI    T   ++E G+V+S+GDGIARVYGL  IQA EMVEF SG+KG+A+N
Sbjct: 8    AELTNLLESRITNFYTNFQVDEIGRVVSVGDGIARVYGLNEIQAGEMVEFASGVKGIALN 67

Query: 280  LXXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANAR 459
            L               I+EGD+VKRTG+IVDVP G  +LGRVVDALG PIDG+G +++
Sbjct: 68   LENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE 127

Query: 460  RSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIIN 639
            R RVEVKAPGII R SV EPM TG+KAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTI+N
Sbjct: 128  RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILN 187

Query: 640  QKRFND-AGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQF 816
            QK+ N  A  + + L+C+Y AVGQKRSTVAQ+V+ L++A A++Y+I+V+ATASD APLQF
Sbjct: 188  QKQLNSKATSESETLYCVYDAVGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQF 247

Query: 817  LAPYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSR 996
            LAPYSGCAMGE+FRDNG HALII+DDLSKQAVAYRQMSLLLRRPPGREA+PGDVFYLHSR
Sbjct: 248  LAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSR 307

Query: 997  LLERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPA 1176
            LLERAAK ++  G GSLTALPVIETQAGDVSAYIPTNVISITDGQI LETELFY+G+RPA
Sbjct: 308  LLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPA 367

Query: 1177 INVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRL 1356
            INVGLSVSRVGSAAQ KAMKQV GS KLELAQYREVAAFAQFGSDLDA+TQ LLNRG RL
Sbjct: 368  INVGLSVSRVGSAAQLKAMKQVCGSPKLELAQYREVAAFAQFGSDLDAATQALLNRGARL 427

Query: 1357 TELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQALLKTIR 1536
            TE+ KQ QY P+ IE+Q+ V+Y  V  + D++    I+++E+       S +  LL++++
Sbjct: 428  TEVPKQPQYAPLPIEKQILVLYGAVNDFCDRMPLDKISQYERTI---PNSVKPELLQSLK 484

Query: 1537 E--EGQISPQTDAQLKDVVVNF 1596
                 +   + D+ LK+  +N+
Sbjct: 485  GGLTNEKKMELDSFLKECALNY 506


>gi|15429015|gb|AAK98045.1| ATP1 [Daucus carota]
 gi|15429018|gb|AAK98046.1| ATP1 [Daucus carota]
          Length = 513

 Score =  641 bits (1653), Expect = 0.0
 Identities = 338/499 (67%), Positives = 400/499 (79%), Gaps = 5/499 (1%)
 Frame = +1

Query: 100  SEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMN 279
            +E++ +LE RI    T   ++E G+V+S+GDGIARVYGL  IQA EMVEF SG+KG+A+N
Sbjct: 8    AELTTLLESRISHFYTNFQVDEIGRVVSVGDGIARVYGLNEIQAGEMVEFASGVKGIALN 67

Query: 280  LXXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANAR 459
            L               I+EGD+VKRTG+IVDVP G  +LGRVVDALG PIDG+G +++
Sbjct: 68   LENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE 127

Query: 460  RSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIIN 639
            R RVEVKAPGII R SV EPM TG+KAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTI+N
Sbjct: 128  RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILN 187

Query: 640  QKRFNDAG-DDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQF 816
            QK+ N     + + L+C+YVA+GQKRSTVAQ+V+ L++A A++Y+I+V+ATASD APLQF
Sbjct: 188  QKQMNSRSTSESETLYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQF 247

Query: 817  LAPYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSR 996
            LAPYSGCAMGE+FRDNG HALII+DDLSKQAVAYRQMSLLLRRPP REA+PGDVFYLHSR
Sbjct: 248  LAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPSREAFPGDVFYLHSR 307

Query: 997  LLERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPA 1176
            LLERAAK ++  G GSLTALPVIETQAGDVSAYIPTNVI ITDGQI LETELFY+G+RPA
Sbjct: 308  LLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPA 367

Query: 1177 INVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRL 1356
            INVGLSVSRVGSAAQ KAMKQV GS KLELAQYREVAA AQFGSDLDA+TQ LLNRG RL
Sbjct: 368  INVGLSVSRVGSAAQLKAMKQVCGSSKLELAQYREVAALAQFGSDLDAATQALLNRGARL 427

Query: 1357 TELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQALLKTIR 1536
            TE+ KQ QY P+ IE+Q+ VIYA V G+ D++    I +FEK   + +      LL+ +
Sbjct: 428  TEVPKQPQYAPLPIEKQILVIYAAVNGFCDRMPLEKIEQFEKVITSLIIPE---LLQKLL 484

Query: 1537 EEGQIS----PQTDAQLKD 1581
            E+G ++     + DA LK+
Sbjct: 485  EKGGLTNERKMEPDAFLKE 503


>gi|37591102|dbj|BAC98904.1| ATPase subunit 1 [Brassica napus]
          Length = 507

 Score =  639 bits (1648), Expect = 0.0
 Identities = 331/496 (66%), Positives = 400/496 (79%), Gaps = 2/496 (0%)
 Frame = +1

Query: 100  SEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMN 279
            +E++ + E RI        ++E G+V+S+GDGIA+VYGL  IQA EMV F +G+KGMA+N
Sbjct: 8    AELTNLFESRIRNFYANFQVDEIGRVVSVGDGIAQVYGLNEIQAGEMVLFANGVKGMALN 67

Query: 280  LXXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANAR 459
            L               I+EGD+VKRTG+IVDVP G  +LGRVVDA+G PIDG+G +++
Sbjct: 68   LENENVGIVVFGGDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDAMGVPIDGRGALSDHE 127

Query: 460  RSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIIN 639
            + RVEVKAPGI+ R SV EPM TG+KAVDSLVPIGRGQREL+IGDRQTGKT IAIDTI+N
Sbjct: 128  QRRVEVKAPGILERKSVHEPMQTGLKAVDSLVPIGRGQRELLIGDRQTGKTTIAIDTILN 187

Query: 640  QKRFND-AGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQF 816
            QK+ N  A  + + ++C+YVA+GQKRSTV Q+++ L +A A++Y+I+V+ATASD APLQF
Sbjct: 188  QKQINSRATSESETMYCVYVAIGQKRSTVGQLIQTLEEANALEYSILVAATASDPAPLQF 247

Query: 817  LAPYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSR 996
            LAPYSGCAMGE+FRDNG HALII+DDLSKQAVAYRQMSLLLRRPPGREA+PGDVFYLHSR
Sbjct: 248  LAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSR 307

Query: 997  LLERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPA 1176
            LLERAAK ++  G GSLTALPVIETQAGDVSAYIPTNVISITDGQI LETELFY+G+RPA
Sbjct: 308  LLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPA 367

Query: 1177 INVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRL 1356
            INVGLSVSRVGSAAQ KAMKQV GS+KLELAQYREVAAFAQFGSDLDA+TQ LLNRG RL
Sbjct: 368  INVGLSVSRVGSAAQLKAMKQVCGSLKLELAQYREVAAFAQFGSDLDAATQALLNRGARL 427

Query: 1357 TELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSS-QQALLKTI 1533
            TE+LKQ QY P+ IE+Q+ VIYA V G+ D++    I+++EK  L  ++    QAL   +
Sbjct: 428  TEVLKQPQYAPLPIEKQILVIYAAVNGFCDRMPLDRISQYEKAILNSVKPELLQALKGGL 487

Query: 1534 REEGQISPQTDAQLKD 1581
              E ++  + DA LK+
Sbjct: 488  TNERKM--ELDAFLKE 501


>gi|9408184|emb|CAB99314.1| F0-F1 ATPase alpha subunit [Sorghum
            bicolor]
 gi|9408186|emb|CAB99315.1| F0-F1 ATPase alpha subunit [Sorghum
            bicolor]
          Length = 441

 Score =  639 bits (1648), Expect = 0.0
 Identities = 328/440 (74%), Positives = 376/440 (84%), Gaps = 1/440 (0%)
 Frame = +1

Query: 115  ILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMNLXXXX 294
            +LE R+    T   ++E G+V+S+GDGIARVYGL  IQA EMVEF SG+KG+A+NL
Sbjct: 2    LLESRMTNFYTNFQVDEIGRVVSVGDGIARVYGLNEIQAGEMVEFASGVKGIALNLENEN 61

Query: 295  XXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANARRSRVE 474
                       I+EGD+VKRTG+IVDVP G  +LGRVVDALG PIDGKG +++  R RVE
Sbjct: 62   VGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGKGALSDHERRRVE 121

Query: 475  VKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIINQKRFN 654
            VKAPGII R SV EPM TG+KAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTI+NQK+ N
Sbjct: 122  VKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMN 181

Query: 655  DAG-DDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQFLAPYS 831
              G ++ + L+C+YVA+GQKRSTVAQ+V+ L++A A++Y+I+V+ATASD APLQFLAPYS
Sbjct: 182  SRGTNESETLYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYS 241

Query: 832  GCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERA 1011
            GCAMGE+FRDNG HALII+DDLSKQAVAYRQMSLLLRRPPGREA+PGDVFYLHSRLLERA
Sbjct: 242  GCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERA 301

Query: 1012 AKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPAINVGL 1191
            AK ++  G GSLTALPVIETQAGDVSAYIPTNVISITDGQI LETELFY+G+RPAINVGL
Sbjct: 302  AKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGL 361

Query: 1192 SVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRLTELLK 1371
            SVSRVGSAAQ KAMKQV GS+KLELAQYREVAAFAQFGSDLDA+TQ LLNRG RLTE+LK
Sbjct: 362  SVSRVGSAAQLKAMKQVCGSLKLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEVLK 421

Query: 1372 QGQYVPMGIEEQVGVIYAGV 1431
            Q QY P+ IE+Q+ VIYA V
Sbjct: 422  QPQYEPLPIEKQIVVIYAAV 441


>gi|903732|gb|AAA75456.1| F1 ATPase alpha subunit
          Length = 510

 Score =  638 bits (1645), Expect = 0.0
 Identities = 330/486 (67%), Positives = 396/486 (80%), Gaps = 1/486 (0%)
 Frame = +1

Query: 100  SEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMN 279
            +E++ +LE RI    T   ++E G+V+S+GDGIARVYGL  IQA  MVEF SG+KG+A+N
Sbjct: 8    AELTTLLESRISNFYTNFQVDEIGRVVSVGDGIARVYGLNEIQAGGMVEFASGVKGIALN 67

Query: 280  LXXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANAR 459
            L               I+EGD+VKRTG+IVDVP G  +LGRVVDALG PIDG+G +++
Sbjct: 68   LENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE 127

Query: 460  RSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIIN 639
            R RVEVKAPGII R SV EPM TG+KAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTI+N
Sbjct: 128  RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILN 187

Query: 640  QKRFNDAG-DDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQF 816
            QK+ N     + + L+C+Y+A+GQKRSTVAQ+V+ L++A AM+Y+I+V+ATASD APLQF
Sbjct: 188  QKQMNSRSTSESETLYCVYLAIGQKRSTVAQLVQILSEANAMEYSILVAATASDPAPLQF 247

Query: 817  LAPYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSR 996
            LAPYSGCAMGE+FRDNG HALII+DDLSKQAVAYRQMSLLLRRPPGR+ +PGDVFYLHSR
Sbjct: 248  LAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGRDGFPGDVFYLHSR 307

Query: 997  LLERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPA 1176
            LLERAAK ++  G GSLTALPVIETQAGDVSAYIPTNVI ITDGQI  ETELFY+G+RPA
Sbjct: 308  LLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPA 367

Query: 1177 INVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRL 1356
            INVGLSVSRVGSAAQ K MKQV GS KLELAQYREVAA AQFGSDLDA+TQ LLNRG RL
Sbjct: 368  INVGLSVSRVGSAAQLKTMKQVCGSSKLELAQYREVAALAQFGSDLDAATQALLNRGARL 427

Query: 1357 TELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQALLKTIR 1536
            TE+ +Q QY P+ IE+Q+ VIYA V G+ D++    I+++E+   A L+S +  LL+++
Sbjct: 428  TEVPRQPQYTPLPIEKQILVIYAAVNGFCDRMPLDRISQYER---AILKSIKTELLQSLL 484

Query: 1537 EEGQIS 1554
            E+G ++
Sbjct: 485  EKGGLT 490


>gi|14916970|sp|P92549|ATP0_ARATH ATP synthase alpha chain,
            mitochondrial
          Length = 507

 Score =  637 bits (1644), Expect = 0.0
 Identities = 331/496 (66%), Positives = 399/496 (79%), Gaps = 2/496 (0%)
 Frame = +1

Query: 100  SEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMN 279
            +E++ + E RI        ++E G+V+S+GDGIA+VYGL  IQA EMV F +G+KGMA+N
Sbjct: 8    AELTNLFESRIRNFYANFQVDEIGRVVSVGDGIAQVYGLNEIQAGEMVLFANGVKGMALN 67

Query: 280  LXXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANAR 459
            L               I+EGD+VKRTG+IVDVP G  +LGRVVDA+G PIDGKG +++
Sbjct: 68   LENENVGIVVFGGDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDAMGVPIDGKGALSDHE 127

Query: 460  RSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIIN 639
            + RVEVKAPGI+ R SV EPM TG+KAVDSLVPIGRGQREL+IG RQTGKT IAIDTI+N
Sbjct: 128  QRRVEVKAPGILERKSVHEPMQTGLKAVDSLVPIGRGQRELLIGGRQTGKTTIAIDTILN 187

Query: 640  QKRFND-AGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQF 816
            QK+ N  A  + + ++C+YVA+GQKRSTV Q+++ L +A A++Y+I+V+ATASD APLQF
Sbjct: 188  QKQINSRATSESETMYCVYVAIGQKRSTVGQLIQTLEEANALEYSILVAATASDPAPLQF 247

Query: 817  LAPYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSR 996
            LAPYSGCAMGE+FRDNG HALII+DDLSKQAVAYRQMSLLLRRPPGREA+PGDVFYLHSR
Sbjct: 248  LAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSR 307

Query: 997  LLERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPA 1176
            LLERAAK ++  G GSLTALPVIETQAGDVSAYIPTNVISITDGQI LETELFY+G+RPA
Sbjct: 308  LLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPA 367

Query: 1177 INVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRL 1356
            INVGLSVSRVGSAAQ KAMKQV GS+KLELAQYREVAAFAQFGSDLDA+TQ LLNRG RL
Sbjct: 368  INVGLSVSRVGSAAQLKAMKQVCGSLKLELAQYREVAAFAQFGSDLDAATQALLNRGARL 427

Query: 1357 TELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSS-QQALLKTI 1533
            TE+LKQ QY P+ IE+Q+ VIYA V G+ D++    I+++EK  L  ++    QAL   +
Sbjct: 428  TEVLKQPQYAPLPIEKQILVIYAAVNGFCDRMPLDRISQYEKAILNSVKPELLQALKGGL 487

Query: 1534 REEGQISPQTDAQLKD 1581
              E ++  + DA LK+
Sbjct: 488  TNERKM--ELDAFLKE 501


>gi|15226092|ref|NP_178788.1| ATP synthase alpha chain, mitochondrial,
            putative [Arabidopsis thaliana]
 gi|20198280|gb|AAM15496.1| hypothetical protein [Arabidopsis
            thaliana]
          Length = 777

 Score =  636 bits (1640), Expect = 0.0
 Identities = 331/496 (66%), Positives = 397/496 (79%), Gaps = 2/496 (0%)
 Frame = +1

Query: 100  SEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMN 279
            +E++ + E RI        ++E G+V+S+GDGIA+VYGL  IQA EMV F +G+KGMA+N
Sbjct: 278  AELTNLFESRIRNFYANFQVDEIGRVVSVGDGIAQVYGLNEIQAGEMVLFANGVKGMALN 337

Query: 280  LXXXXXXXXXXXXXXXIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANAR 459
            L               I+EGD+VKRTG+IVDVP G  +LGRVVDA+G PIDGKG +++
Sbjct: 338  LENENVGIVVFGGDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDAMGVPIDGKGALSDHE 397

Query: 460  RSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIIN 639
            + RVEVKAPGI+ R SV EPM TG+KAVDSLVPIGRGQREL+IGDRQTGKT IAIDTI+N
Sbjct: 398  QRRVEVKAPGILERKSVHEPMQTGLKAVDSLVPIGRGQRELLIGDRQTGKTTIAIDTILN 457

Query: 640  QKRFND-AGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQF 816
            QK+ N  A  + + ++C+YVA+GQKRSTV Q+++ L +A A++Y+I+V+ATASD APLQF
Sbjct: 458  QKQINSRATSESETMYCVYVAIGQKRSTVGQLIQTLEEANALEYSILVAATASDPAPLQF 517

Query: 817  LAPYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSR 996
            LAPYSGCAMGE+FRDNG HALII+DDLSKQAVAYRQMSLLLRRPPGREA+PGDVFYLHSR
Sbjct: 518  LAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSR 577

Query: 997  LLERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPA 1176
            LLERAAK ++  G GSLTALPVIETQAGDVSAYIPTNVISITDGQI LETELFY+G+RPA
Sbjct: 578  LLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPA 637

Query: 1177 INVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRL 1356
            INVGLSVSRVGSAAQ KAMKQV GS KLELAQYREVAAFAQFGSDLDA+TQ LLNRG RL
Sbjct: 638  INVGLSVSRVGSAAQLKAMKQVCGSSKLELAQYREVAAFAQFGSDLDAATQALLNRGARL 697

Query: 1357 TELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSS-QQALLKTI 1533
            TE+ KQ QY P+ IE+Q+ VIYA V G+ D++    I+++EK     ++    QAL   +
Sbjct: 698  TEVPKQPQYAPLPIEKQILVIYAAVNGFCDRMPLDRISQYEKAIPNSVKPELLQALKGGL 757

Query: 1534 REEGQISPQTDAQLKD 1581
              E ++ P  DA LK+
Sbjct: 758  TNERKMEP--DAFLKE 771




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