Homology by BLASTX


BLASTX 2.2.4 [Aug-26-2002]
Query= H21M04_1
         (528 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|17564284|ref|NP_505916.1| involved in lipopolysaccharide bios...   177   1e-43
gi|39592042|emb|CAE75262.1| Hypothetical protein CBG23225 [Caeno...    93   2e-18
gi|6683492|dbj|BAA89208.1| bromodomain PHD finger transcription ...    34   1.3
gi|46226296|gb|EAK87309.1| hypothetical protein, shares a domain...    33   3.9
gi|23508305|ref|NP_700974.1| vacuolar sorting protein 35, putati...    32   8.7


>gi|17564284|ref|NP_505916.1| involved in lipopolysaccharide
           biosynthesis (79.3 kD) (5L974) [Caenorhabditis elegans]
 gi|7507679|pir||T23108 hypothetical protein T11F9.12 -
           Caenorhabditis elegans
 gi|3878074|emb|CAA20938.1| Hypothetical protein T11F9.12
           [Caenorhabditis elegans]
 gi|3879697|emb|CAA98537.1| Hypothetical protein T11F9.12
           [Caenorhabditis elegans]
          Length = 688

 Score =  177 bits (448), Expect = 1e-43
 Identities = 88/102 (86%), Positives = 88/102 (86%)
 Frame = -1

Query: 528 MRKRAILIPLLFCLVTPILLYFLGSYALHLLQNYEKGEEEKVRDWQQKHQPKQDDDLELP 349
           MRKRAILIPLLFCLVTPILLYFLGSYALHLLQNYEKGEEEKVRDWQQKHQPKQDDDLELP
Sbjct: 1   MRKRAILIPLLFCLVTPILLYFLGSYALHLLQNYEKGEEEKVRDWQQKHQPKQDDDLELP 60

Query: 348 SDFVYTEAPVVVNVGRSXXXXXXXXXXXXXXEVEWITAPPRK 223
           SDFVYTEAPVVVNVGRS              EVEWITAPPRK
Sbjct: 61  SDFVYTEAPVVVNVGRSSEENNKIEEIEKSEEVEWITAPPRK 102




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