Homology by BLASTX


BLASTX 2.2.4 [Aug-26-2002]
Query= H20J18_2
         (2844 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|25150503|ref|NP_741912.1| suppressor of Constitutive Dauer fo...   697   0.0
gi|25150506|ref|NP_741911.1| suppressor of Constitutive Dauer fo...   638   0.0
gi|39588006|emb|CAE57237.1| Hypothetical protein CBG00115 [Caeno...   415   e-114
gi|17550246|ref|NP_509243.1| predicted CDS, aldose reductase (XH...    60   4e-07
gi|17511177|ref|NP_493324.1| putative protein family member, wit...    43   0.037
gi|42568862|ref|NP_178253.2| ATP-dependent DNA helicase, putativ...    40   0.24
gi|25410905|pir||G84424 probable ATP-dependent DNA helicase RECG...    40   0.24
gi|46137597|ref|XP_390490.1| hypothetical protein FG10314.1 [Gib...    38   1.2
gi|38102578|gb|EAA49399.1| hypothetical protein MG01057.4 [Magna...    38   1.6
gi|1076211|pir||S50755 hypothetical protein VSP-3 - Chlamydomona...    38   1.6
gi|49072214|ref|XP_400396.1| hypothetical protein UM02781.1 [Ust...    37   2.0
gi|38105704|gb|EAA52098.1| hypothetical protein MG03693.4 [Magna...    37   2.6
gi|6324372|ref|NP_014442.1| Anchorage subunit of a-agglutinin of...    37   3.5
gi|47206883|emb|CAF96022.1| unnamed protein product [Tetraodon n...    36   4.5
gi|7020225|dbj|BAA91039.1| unnamed protein product [Homo sapiens]      36   4.5
gi|730703|sp|P39806|SALM_DROVI Homeotic protein spalt-major >gnl...    36   4.5
gi|39598251|emb|CAE68943.1| Hypothetical protein CBG14923 [Caeno...    36   4.5
gi|284667|pir||A43427 neurofilament triplet H1 protein - rabbit ...    36   5.9
gi|34898734|ref|NP_910713.1| contains ESTs C28562(C61610),C25917...    36   5.9
gi|284668|pir||B43427 neurofilament protein H form H2 (repetitiv...    36   5.9
gi|15222149|ref|NP_175372.1| leucine-rich repeat family protein ...    35   7.7
gi|11496279|ref|NP_005897.1| male germ cell-associated kinase; s...    35   7.7


>gi|25150503|ref|NP_741912.1| suppressor of Constitutive Dauer
            formation SCD-1, putative protein, with 2 coiled coil-4
            domains (scd-1) [Caenorhabditis elegans]
 gi|7504948|pir||T23107 hypothetical protein H20J18.1 - Caenorhabditis
            elegans
 gi|3878071|emb|CAA18898.1| Hypothetical protein H20J18.1a
            [Caenorhabditis elegans]
          Length = 947

 Score =  697 bits (1800), Expect = 0.0
 Identities = 361/443 (81%), Positives = 361/443 (81%)
 Frame = -1

Query: 1332 STSTPNSQDRKIPHTELVNASGQSIVGLSSTPGFQVSTPGLXXXXXXXXXXXXXPNAQQQ 1153
            STSTPNSQDRKIPHTELVNASGQSIVGLSSTPGFQVSTPGL             PNAQQQ
Sbjct: 505  STSTPNSQDRKIPHTELVNASGQSIVGLSSTPGFQVSTPGLTQSATTPIPTSITPNAQQQ 564

Query: 1152 FQKHFEGQTMLLQHALLQHANNSTNSASKATLHDIRFXXXXXXXXXXXXXXXXXXQTTLH 973
            FQKHFEGQTMLLQHALLQHANNSTNSASKATLHDIRF                  QTTLH
Sbjct: 565  FQKHFEGQTMLLQHALLQHANNSTNSASKATLHDIRFQAMAQQQQQVAASGVGQGQTTLH 624

Query: 972  PFIRPNDTTRQAQLVNGVGDQTVXXXXXXXXXXXXRXXXXXXXXXXXXSWAKEPIINVED 793
            PFIRPNDTTRQAQLVNGVGDQTV            R            SWAKEPIINVED
Sbjct: 625  PFIRPNDTTRQAQLVNGVGDQTVSPRPIPLDPSPPRATSGGSTAASTASWAKEPIINVED 684

Query: 792  DKXXXXXXXXXXTASHPVNPIGIANPLXXXXXXAGFHTTKTSTAVSGNGNPGSNVATPVL 613
            DK          TASHPVNPIGIANPL      AGFHTTKTSTAVSGNGNPGSNVATPVL
Sbjct: 685  DKPSTSSGPSTTTASHPVNPIGIANPLSAASAAAGFHTTKTSTAVSGNGNPGSNVATPVL 744

Query: 612  SIIQMSEDHFTDTFRKSDQKMHQGQAGNINGQAVRSPKSDGNDSDERPPALAPILMMSYL 433
            SIIQMSEDHFTDTFRKSDQKMHQGQAGNINGQAVRSPKSDGNDSDERPPALAPILMMSYL
Sbjct: 745  SIIQMSEDHFTDTFRKSDQKMHQGQAGNINGQAVRSPKSDGNDSDERPPALAPILMMSYL 804

Query: 432  NNCMSHAKTHLTANGHXXXXXXXXXXXDFAARPIDPIFKDAREDMKAKDVRTLEHAVKRP 253
            NNCMSHAKTHLTANGH           DFAARPIDPIFKDAREDMKAKDVRTLEHAVKRP
Sbjct: 805  NNCMSHAKTHLTANGHQVGVDDDGQVVDFAARPIDPIFKDAREDMKAKDVRTLEHAVKRP 864

Query: 252  FSNNMATHAKNVKESPSPQRHPGQSPHQIPSPMRQGAHNPLGINRSIPDAAPPKIEADSS 73
            FSNNMATHAKNVKESPSPQRHPGQSPHQIPSPMRQGAHNPLGINRSIPDAAPPKIEADSS
Sbjct: 865  FSNNMATHAKNVKESPSPQRHPGQSPHQIPSPMRQGAHNPLGINRSIPDAAPPKIEADSS 924

Query: 72   RSPSEDLEEDGGGKRLRIATDEE 4
            RSPSEDLEEDGGGKRLRIATDEE
Sbjct: 925  RSPSEDLEEDGGGKRLRIATDEE 947



 Score =  165 bits (418), Expect = 5e-39
 Identities = 99/146 (67%), Positives = 99/146 (67%)
 Frame = -1

Query: 2058 FVNAIANXXXXXXXXXXXXXXXPISTPVCHVPYFDVNMYRSVNIEAMPSHDASGMDLPLI 1879
            FVNAIAN               PISTPVCHVPYFDVNMYRSVNIEAMPSHDASGMDLPLI
Sbjct: 263  FVNAIANPPCPPPPPGIPSMPWPISTPVCHVPYFDVNMYRSVNIEAMPSHDASGMDLPLI 322

Query: 1878 DITTLRFFFNLGVQQSRNLIAARXXXXXXXXXXXXXXXXXXXXPATSIQESLSAPPGASP 1699
            DITTLRFFFNLGVQQSRNLIAAR                    PATSIQESLSAPPGASP
Sbjct: 323  DITTLRFFFNLGVQQSRNLIAARQHQQVQHQSQNQPGQPPAQQPATSIQESLSAPPGASP 382

Query: 1698 NLIALXXXXXXXXXXXXNTIEQLNAL 1621
            NLIAL            NTIEQLNAL
Sbjct: 383  NLIALVNQPNGGQVPNQNTIEQLNAL 408



 Score =  143 bits (361), Expect = 2e-32
 Identities = 71/71 (100%), Positives = 71/71 (100%)
 Frame = -1

Query: 2844 MNVGNGINPVNHGITPAQMQSLHSMGLNPAQLAMMMQLPNGVQLQQPQQSTANNPAAVSS 2665
            MNVGNGINPVNHGITPAQMQSLHSMGLNPAQLAMMMQLPNGVQLQQPQQSTANNPAAVSS
Sbjct: 1    MNVGNGINPVNHGITPAQMQSLHSMGLNPAQLAMMMQLPNGVQLQQPQQSTANNPAAVSS 60

Query: 2664 AQQIVNVQAMG 2632
            AQQIVNVQAMG
Sbjct: 61   AQQIVNVQAMG 71


>gi|25150506|ref|NP_741911.1| suppressor of Constitutive Dauer
            formation SCD-1, putative protein, with 2 coiled coil-4
            domains (scd-1) [Caenorhabditis elegans]
 gi|22265916|emb|CAD44137.1| Hypothetical protein H20J18.1b
            [Caenorhabditis elegans]
          Length = 909

 Score =  638 bits (1646), Expect = 0.0
 Identities = 340/450 (75%), Positives = 340/450 (75%), Gaps = 7/450 (1%)
 Frame = -1

Query: 1332 STSTPNSQDRKIPHTELVNASGQSIVGLSSTPGFQVSTPGLXXXXXXXXXXXXXPNAQQQ 1153
            STSTPNSQDRKIPHTELVNASGQSIVGLSSTPGFQVSTPGL             PNAQQQ
Sbjct: 505  STSTPNSQDRKIPHTELVNASGQSIVGLSSTPGFQVSTPGLTQSATTPIPTSITPNAQQQ 564

Query: 1152 FQKHFEGQTMLLQHALLQHANNSTNSASKATLHDIRFXXXXXXXXXXXXXXXXXXQTTLH 973
            FQKHFEGQTMLLQHALLQHANNSTNSASKATLHDIRF                  QTTLH
Sbjct: 565  FQKHFEGQTMLLQHALLQHANNSTNSASKATLHDIRFQAMAQQQQQVAASGVGQGQTTLH 624

Query: 972  PFIRPNDTTRQAQLVNGVGDQTVXXXXXXXXXXXXRXXXXXXXXXXXXSWAKEPIINVED 793
            PFIRPND                                             EPIINVED
Sbjct: 625  PFIRPND---------------------------------------------EPIINVED 639

Query: 792  DKXXXXXXXXXXTASHPVNPIGIANPLXXXXXXAGFHTTKTSTAVSGNGNPGSNVATPVL 613
            DK          TASHPVNPIGIANPL      AGFHTTKTSTAVSGNGNPGSNVATPVL
Sbjct: 640  DKPSTSSGPSTTTASHPVNPIGIANPLSAASAAAGFHTTKTSTAVSGNGNPGSNVATPVL 699

Query: 612  SIIQMSEDHFTDTFRKSDQK-------MHQGQAGNINGQAVRSPKSDGNDSDERPPALAP 454
            SIIQMSEDHFTDTFRKSDQK       MHQGQAGNINGQAVRSPKSDGNDSDERPPALAP
Sbjct: 700  SIIQMSEDHFTDTFRKSDQKLNGSLLQMHQGQAGNINGQAVRSPKSDGNDSDERPPALAP 759

Query: 453  ILMMSYLNNCMSHAKTHLTANGHXXXXXXXXXXXDFAARPIDPIFKDAREDMKAKDVRTL 274
            ILMMSYLNNCMSHAKTHLTANGH           DFAARPIDPIFKDAREDMKAKDVRTL
Sbjct: 760  ILMMSYLNNCMSHAKTHLTANGHQVGVDDDGQVVDFAARPIDPIFKDAREDMKAKDVRTL 819

Query: 273  EHAVKRPFSNNMATHAKNVKESPSPQRHPGQSPHQIPSPMRQGAHNPLGINRSIPDAAPP 94
            EHAVKRPFSNNMATHAKNVKESPSPQRHPGQSPHQIPSPMRQGAHNPLGINRSIPDAAPP
Sbjct: 820  EHAVKRPFSNNMATHAKNVKESPSPQRHPGQSPHQIPSPMRQGAHNPLGINRSIPDAAPP 879

Query: 93   KIEADSSRSPSEDLEEDGGGKRLRIATDEE 4
            KIEADSSRSPSEDLEEDGGGKRLRIATDEE
Sbjct: 880  KIEADSSRSPSEDLEEDGGGKRLRIATDEE 909



 Score =  165 bits (418), Expect = 5e-39
 Identities = 99/146 (67%), Positives = 99/146 (67%)
 Frame = -1

Query: 2058 FVNAIANXXXXXXXXXXXXXXXPISTPVCHVPYFDVNMYRSVNIEAMPSHDASGMDLPLI 1879
            FVNAIAN               PISTPVCHVPYFDVNMYRSVNIEAMPSHDASGMDLPLI
Sbjct: 263  FVNAIANPPCPPPPPGIPSMPWPISTPVCHVPYFDVNMYRSVNIEAMPSHDASGMDLPLI 322

Query: 1878 DITTLRFFFNLGVQQSRNLIAARXXXXXXXXXXXXXXXXXXXXPATSIQESLSAPPGASP 1699
            DITTLRFFFNLGVQQSRNLIAAR                    PATSIQESLSAPPGASP
Sbjct: 323  DITTLRFFFNLGVQQSRNLIAARQHQQVQHQSQNQPGQPPAQQPATSIQESLSAPPGASP 382

Query: 1698 NLIALXXXXXXXXXXXXNTIEQLNAL 1621
            NLIAL            NTIEQLNAL
Sbjct: 383  NLIALVNQPNGGQVPNQNTIEQLNAL 408



 Score =  143 bits (361), Expect = 2e-32
 Identities = 71/71 (100%), Positives = 71/71 (100%)
 Frame = -1

Query: 2844 MNVGNGINPVNHGITPAQMQSLHSMGLNPAQLAMMMQLPNGVQLQQPQQSTANNPAAVSS 2665
            MNVGNGINPVNHGITPAQMQSLHSMGLNPAQLAMMMQLPNGVQLQQPQQSTANNPAAVSS
Sbjct: 1    MNVGNGINPVNHGITPAQMQSLHSMGLNPAQLAMMMQLPNGVQLQQPQQSTANNPAAVSS 60

Query: 2664 AQQIVNVQAMG 2632
            AQQIVNVQAMG
Sbjct: 61   AQQIVNVQAMG 71




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