Homology by BLASTX


BLASTX 2.2.4 [Aug-26-2002]
Query= F56D12_4
         (495 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|32565040|ref|NP_740970.2| putative protein, with at least 2 t...   152   2e-36
gi|25148369|ref|NP_740971.1| Hyaluronan/mRNA binding protein (40...    44   0.001
gi|39586979|emb|CAE62914.1| Hypothetical protein CBG07107 [Caeno...    41   0.012
gi|46122333|ref|XP_385720.1| hypothetical protein FG05544.1 [Gib...    33   2.5
gi|23612857|ref|NP_704396.1| hypothetical protein [Plasmodium fa...    33   3.3
gi|49475301|ref|YP_033342.1| hypothetical protein BH05060 [Barto...    32   5.5
gi|2558842|gb|AAC46028.1| polyketide synthase module 7 [Streptom...    32   5.5
gi|28828844|gb|AAO51439.1| similar to Homo sapiens (Human). Muci...    31   9.5


>gi|32565040|ref|NP_740970.2| putative protein, with at least 2
           transmembrane domains (2B613) [Caenorhabditis elegans]
 gi|28275135|gb|AAM34394.2| Vig (drosophila vasa intronic gene)
           ortholog protein 1, isoform b [Caenorhabditis elegans]
          Length = 165

 Score =  152 bits (385), Expect = 2e-36
 Identities = 87/165 (52%), Positives = 87/165 (52%), Gaps = 1/165 (0%)
 Frame = +1

Query: 1   MSTEYGCQVTNKFGLPSXXXXXXXXPR-ERVSNENGDXXXXXXXXXXXXXXXXXXXXXXX 177
           MSTEYGCQVTNKFGLPS        PR ERVSNENGD
Sbjct: 1   MSTEYGCQVTNKFGLPSDDDDEYDDPRGERVSNENGDRPQGENRRGGPRRGGERGAARPA 60

Query: 178 XXXXXXXXXXXXXXXXXPTNSPALIQMLCSSLHLVFFKILLFSISLPVPIYPTNCSFPKC 357
                            PTNSPALIQMLCSSLHLVFFKILLFSISLPVPIYPTNCSFPKC
Sbjct: 61  GRGGRGGFTRENREGEEPTNSPALIQMLCSSLHLVFFKILLFSISLPVPIYPTNCSFPKC 120

Query: 358 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXCPRFGLLVISRFFFNF 492
                                        CPRFGLLVISRFFFNF
Sbjct: 121 LFLIFLFFLVPPFSLLLLSPALSISLLMSCPRFGLLVISRFFFNF 165




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