Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= F56A11_5
(1335 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|17540704|ref|NP_499950.1| putative protein, with at least 2 t... 422 e-117
gi|49035123|gb|AAB92077.2| Hypothetical protein F56A11.6 [Caenor... 422 e-117
gi|39587535|emb|CAE58473.1| Hypothetical protein CBG01613 [Caeno... 123 1e-26
gi|31207653|ref|XP_312793.1| ENSANGP00000020338 [Anopheles gambi... 37 1.4
gi|12311853|emb|CAC22669.1| possible surface antigen [Leishmania... 37 1.4
gi|15320844|ref|NP_203354.1| CUN050 hypothetical protein [Culex ... 35 4.0
gi|46324709|ref|ZP_00225069.1| COG3704: Type IV secretory pathwa... 34 6.9
>gi|17540704|ref|NP_499950.1| putative protein, with at least 2
transmembrane domains (4B334) [Caenorhabditis elegans]
gi|7504359|pir||T32648 hypothetical protein F56A11.6 - Caenorhabditis
elegans
Length = 444
Score = 422 bits (1085), Expect = e-117
Identities = 227/297 (76%), Positives = 227/297 (76%)
Frame = -1
Query: 1335 MAFDEVKNWRYVHPLCAVLANYFVFLIQLVLFAHANDSFKDGHVWAYVSMSLTLISAISI 1156
MAFDEVKNWRYVHPLCAVLANYFVFLIQLVLFAHANDSFKDGHVWAYVSMSLTLISAISI
Sbjct: 1 MAFDEVKNWRYVHPLCAVLANYFVFLIQLVLFAHANDSFKDGHVWAYVSMSLTLISAISI 60
Query: 1155 GVLFLLAAKPSMFSSKLGLILCAVAAASTVTAGCLLFPITATXXXXXXXXXXXXXXXXST 976
GVLFLLAAKPSMFSSKLGLILCAVAAASTVTAGCLLFPITAT ST
Sbjct: 61 GVLFLLAAKPSMFSSKLGLILCAVAAASTVTAGCLLFPITATAPKGRAGSAPAPPPGSST 120
Query: 975 EDKVKRXXXXXXXXXXSLDFDKKIPPSTFMLLINTAITSXXXXXXXXXXXLKMRADAPFA 796
EDKVKR SLDFDKKIPPSTFMLLINTAITS LKMRADAPFA
Sbjct: 121 EDKVKRAAAAASPTAASLDFDKKIPPSTFMLLINTAITSLVLFVLMLMLFLKMRADAPFA 180
Query: 795 EPRKHPARDERRPRSRVTIFNFSANLLVLCMDHLHRMVHLVMMTGDAMKRIGQLFAEKFS 616
EPRKHPARDERRPRSRVTIFNFSANLLVLCMDHLHRMVHLVMMTGDAMKRIGQLFAEKFS
Sbjct: 181 EPRKHPARDERRPRSRVTIFNFSANLLVLCMDHLHRMVHLVMMTGDAMKRIGQLFAEKFS 240
Query: 615 KKTKLNFRRRTEDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPRKSHQKSV 445
KKTKLNFRRRTEDV SPRKSHQKSV
Sbjct: 241 KKTKLNFRRRTEDVDRSKDRSLKRREERSRSRQDRERDRSRGGEKSRSPRKSHQKSV 297
Score = 43.1 bits (100), Expect = 0.015
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = -1
Query: 63 QDKSKTRSVEDRPRSRSNKR 4
QDKSKTRSVEDRPRSRSNKR
Sbjct: 425 QDKSKTRSVEDRPRSRSNKR 444
>gi|49035123|gb|AAB92077.2| Hypothetical protein F56A11.6
[Caenorhabditis elegans]
Length = 442
Score = 422 bits (1085), Expect = e-117
Identities = 227/297 (76%), Positives = 227/297 (76%)
Frame = -1
Query: 1335 MAFDEVKNWRYVHPLCAVLANYFVFLIQLVLFAHANDSFKDGHVWAYVSMSLTLISAISI 1156
MAFDEVKNWRYVHPLCAVLANYFVFLIQLVLFAHANDSFKDGHVWAYVSMSLTLISAISI
Sbjct: 1 MAFDEVKNWRYVHPLCAVLANYFVFLIQLVLFAHANDSFKDGHVWAYVSMSLTLISAISI 60
Query: 1155 GVLFLLAAKPSMFSSKLGLILCAVAAASTVTAGCLLFPITATXXXXXXXXXXXXXXXXST 976
GVLFLLAAKPSMFSSKLGLILCAVAAASTVTAGCLLFPITAT ST
Sbjct: 61 GVLFLLAAKPSMFSSKLGLILCAVAAASTVTAGCLLFPITATAPKGRAGSAPAPPPGSST 120
Query: 975 EDKVKRXXXXXXXXXXSLDFDKKIPPSTFMLLINTAITSXXXXXXXXXXXLKMRADAPFA 796
EDKVKR SLDFDKKIPPSTFMLLINTAITS LKMRADAPFA
Sbjct: 121 EDKVKRAAAAASPTAASLDFDKKIPPSTFMLLINTAITSLVLFVLMLMLFLKMRADAPFA 180
Query: 795 EPRKHPARDERRPRSRVTIFNFSANLLVLCMDHLHRMVHLVMMTGDAMKRIGQLFAEKFS 616
EPRKHPARDERRPRSRVTIFNFSANLLVLCMDHLHRMVHLVMMTGDAMKRIGQLFAEKFS
Sbjct: 181 EPRKHPARDERRPRSRVTIFNFSANLLVLCMDHLHRMVHLVMMTGDAMKRIGQLFAEKFS 240
Query: 615 KKTKLNFRRRTEDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPRKSHQKSV 445
KKTKLNFRRRTEDV SPRKSHQKSV
Sbjct: 241 KKTKLNFRRRTEDVDRSKDRSLKRREERSRSRQDRERDRSRGGEKSRSPRKSHQKSV 297
Score = 43.1 bits (100), Expect = 0.015
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = -1
Query: 63 QDKSKTRSVEDRPRSRSNKR 4
QDKSKTRSVEDRPRSRSNKR
Sbjct: 423 QDKSKTRSVEDRPRSRSNKR 442