Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= F54D1_4
(1611 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|25152746|ref|NP_502117.2| nuclear Hormone Receptor (60.4 kD) ... 936 0.0
gi|39593743|emb|CAE62036.1| Hypothetical protein CBG06052 [Caeno... 774 0.0
gi|39595072|emb|CAE70940.1| Hypothetical protein CBG17744 [Caeno... 124 6e-27
gi|25152753|ref|NP_741456.1| nuclear Hormone Receptor (65.5 kD) ... 124 6e-27
gi|10197985|gb|AAG15127.1| nuclear receptor NHR-31 [Caenorhabdit... 124 6e-27
gi|10197987|gb|AAG15128.1| nuclear receptor NHR-31 [Caenorhabdit... 124 6e-27
gi|17568425|ref|NP_510423.1| nuclear Hormone Receptor (51.3 kD) ... 112 2e-23
gi|39584683|emb|CAE72436.1| Hypothetical protein CBG19603 [Caeno... 112 3e-23
gi|39596578|emb|CAE63197.1| Hypothetical protein CBG07552 [Caeno... 112 3e-23
gi|39752847|gb|AAR30203.1| Nuclear hormone receptor family prote... 110 7e-23
gi|10198089|gb|AAG15179.1| nuclear receptor NHR-88 [Caenorhabdit... 110 7e-23
gi|27669076|gb|AAO21381.1| Nuclear hormone receptor family prote... 110 7e-23
gi|32563886|ref|NP_494413.2| nuclear Hormone Receptor (64.1 kD) ... 110 7e-23
gi|1036837|gb|AAC46926.1| DHR38 102 3e-20
gi|28574322|ref|NP_788079.1| CG1864-PC [Drosophila melanogaster]... 102 3e-20
gi|2645018|emb|CAA75690.1| hormone receptor 38 [Drosophila melan... 102 3e-20
gi|3334657|emb|CAA05172.1| hormone receptor 38 [Drosophila melan... 102 3e-20
gi|17137128|ref|NP_477119.1| CG1864-PB [Drosophila melanogaster]... 102 3e-20
gi|12644294|sp|P49869|HR38_DROME Probable nuclear hormone recept... 102 3e-20
gi|2133651|pir||S58238 DHR38 protein - fruit fly (Drosophila mel... 102 3e-20
gi|48097940|ref|XP_393927.1| similar to ENSANGP00000013260 [Apis... 100 1e-19
gi|39584675|emb|CAE72428.1| Hypothetical protein CBG19594 [Caeno... 100 1e-19
gi|6671099|gb|AAF23095.1| nuclear hormone receptor [Aedes aegypti] 98 5e-19
gi|31222116|ref|XP_317123.1| ENSANGP00000018222 [Anopheles gambi... 98 5e-19
gi|1708293|sp|P49870|HR38_BOMMO PROBABLE NUCLEAR HORMONE RECEPTO... 98 6e-19
gi|39595242|emb|CAE60279.1| Hypothetical protein CBG03860 [Caeno... 98 6e-19
gi|25513780|pir||H89591 protein T01B10.4 [imported] - Caenorhabd... 97 1e-18
gi|33943630|gb|AAQ55494.1| NHR-41A [Caenorhabditis elegans] 97 1e-18
gi|39583834|emb|CAE74907.1| Hypothetical protein CBG22776 [Caeno... 97 1e-18
gi|44888978|sp|O02151|NH14_CAEEL Nuclear hormone receptor family... 97 1e-18
gi|25150309|ref|NP_741861.1| nuclear Hormone Receptor (nhr-14) [... 97 1e-18
gi|25150304|ref|NP_741860.1| nuclear Hormone Receptor (nhr-14) [... 97 1e-18
gi|45477170|sp|Q9N4B8|NH41_CAEEL Nuclear hormone receptor family... 97 1e-18
gi|30025114|gb|AAP13776.1| Nuclear hormone receptor family prote... 97 1e-18
gi|33943632|gb|AAQ55495.1| NHR-41B [Caenorhabditis elegans] 97 1e-18
gi|1710719|sp|P51128|RXRA_XENLA Retinoic acid receptor RXR-alpha 97 1e-18
gi|283824|pir||C41977 retinoid receptor alpha - African clawed frog 97 1e-18
gi|6981496|ref|NP_036937.1| retinoid X receptor alpha [Rattus no... 97 1e-18
gi|17508463|ref|NP_491103.1| nuclear Hormone Receptor (nhr-64) [... 96 2e-18
gi|39645799|gb|AAH63827.1| RXRA protein [Homo sapiens] 96 2e-18
gi|27894349|ref|NP_775263.1| nuclear receptor subfamily 4, group... 96 2e-18
gi|1685271|gb|AAB36777.1| RXR alpha 2 [Mus musculus] >gnl|BL_ORD... 96 2e-18
gi|27894351|ref|NP_775264.1| nuclear receptor subfamily 4, group... 96 2e-18
gi|2052391|gb|AAC53154.1| steroid/thyroid hormone orphan nuclear... 96 2e-18
gi|4003528|gb|AAC95154.1| retinoic acid receptor RXR [Cloning ve... 96 2e-18
gi|310216|gb|AAA42058.1| nuclear receptor 96 2e-18
gi|913967|gb|AAB33999.1| NGFI-B/nur77 beta-type transcription fa... 96 2e-18
gi|27894353|ref|NP_775265.1| nuclear receptor subfamily 4, group... 96 2e-18
gi|4514523|dbj|BAA75461.1| Nurr2 [Mus musculus] 96 2e-18
gi|9931482|gb|AAG02188.1| retinoid-X-receptor [Cloning vector pF... 96 2e-18
gi|31543340|ref|NP_062201.2| nuclear receptor subfamily 4, group... 96 2e-18
gi|2119665|pir||I84692 nuclear orphan receptor HZF-3 - rat >gnl|... 96 2e-18
gi|5453822|ref|NP_006177.1| nuclear receptor subfamily 4, group ... 96 2e-18
gi|6166579|sp|Q07917|NR42_RAT Orphan nuclear receptor NURR1 (NUR... 96 2e-18
gi|7305325|ref|NP_038641.1| nuclear receptor subfamily 4, group ... 96 2e-18
gi|28396028|gb|AAO39177.1| nuclear receptor NHR-64 [Caenorhabdit... 96 2e-18
gi|6755384|ref|NP_035435.1| retinoid X receptor alpha; RXR alpha... 96 2e-18
gi|4506755|ref|NP_002948.1| retinoid X receptor, alpha [Homo sap... 96 2e-18
gi|17535075|ref|NP_494368.1| nuclear Hormone Receptor (nhr-119) ... 96 2e-18
gi|32563894|ref|NP_495534.3| nuclear Hormone Receptor (nhr-21) [... 96 2e-18
gi|25396656|pir||D88206 protein nhr-21.a [imported] - Caenorhabd... 96 2e-18
gi|28275159|gb|AAO38653.1| Nuclear hormone receptor family prote... 96 2e-18
gi|4139092|gb|AAD03691.1| nuclear receptor NHR-21a [Caenorhabdit... 96 2e-18
gi|14574111|gb|AAD31548.2| Nuclear hormone receptor family prote... 96 2e-18
gi|24582911|ref|NP_723414.1| CG9310-PC [Drosophila melanogaster]... 96 3e-18
gi|480042|pir||S36218 hepatocyte nuclear factor 4 - fruit fly (D... 96 3e-18
gi|28275161|gb|AAO38655.1| Nuclear hormone receptor family prote... 96 3e-18
gi|24582907|ref|NP_476887.2| CG9310-PA [Drosophila melanogaster]... 96 3e-18
gi|24582909|ref|NP_723413.1| CG9310-PB [Drosophila melanogaster]... 96 3e-18
gi|50539872|ref|NP_001002406.1| zgc:92696 [Danio rerio] >gnl|BL_... 95 4e-18
gi|6176566|gb|AAF05623.1| orphan nuclear receptor TECdeltaC shor... 95 4e-18
gi|1311505|gb|AAB36006.1| steroid/thyroid orphan receptor homolo... 95 4e-18
gi|3821745|emb|CAA09764.1| neuron-derived orphan receptor-1 beta... 95 4e-18
gi|2500915|sp|Q92570|NR43_HUMAN Nuclear hormone receptor NOR-1 (... 95 4e-18
gi|1651191|dbj|BAA11419.1| neuron derived orphan receptor [Homo ... 95 4e-18
gi|27894355|ref|NP_008912.2| nuclear receptor subfamily 4, group... 95 4e-18
gi|13994173|ref|NP_113816.1| nuclear receptor subfamily 4, group... 95 4e-18
gi|47523566|ref|NP_999412.1| neuron-derived orphan receptor-1 al... 95 4e-18
gi|27894359|ref|NP_775291.1| nuclear receptor subfamily 4, group... 95 4e-18
gi|7441771|pir||S71930 neuron-derived receptor NOR-1 - human 95 4e-18
gi|7657397|ref|NP_056558.1| nuclear receptor subfamily 4, group ... 95 4e-18
gi|27894361|ref|NP_775292.1| nuclear receptor subfamily 4, group... 95 4e-18
gi|12657450|emb|CAC27783.1| nuclear receptor related 1 [Oryzias ... 95 4e-18
gi|924282|gb|AAB02581.1| mitogen induced nuclear orphan receptor 95 4e-18
gi|8393838|ref|NP_059048.1| nuclear receptor subfamily 4, group ... 95 4e-18
gi|9955274|pdb|1DSZ|B Chain B, Structure Of The RxrRAR DNA-Bindi... 95 5e-18
gi|45645185|sp|Q17771|NH35_CAEEL Nuclear hormone receptor family... 95 5e-18
gi|32566294|ref|NP_508779.3| nuclear Hormone Receptor (54.7 kD) ... 95 5e-18
gi|7511656|pir||T34093 steroid/thyroid/retinoic nuclear hormone ... 95 5e-18
gi|19386469|gb|AAL86461.1| RXR-like protein [Biomphalaria glabrata] 95 5e-18
gi|10197991|gb|AAG15130.1| nuclear receptor NHR-35 [Caenorhabdit... 95 5e-18
gi|10198055|gb|AAG15162.1| nuclear receptor NHR-62 [Caenorhabdit... 94 7e-18
gi|7500322|pir||T21645 hypothetical protein F32B6.1 - Caenorhabd... 94 7e-18
gi|39595537|emb|CAE60575.1| Hypothetical protein CBG04204 [Caeno... 94 7e-18
gi|7510381|pir||T23558 hypothetical protein Y67A6A.2 - Caenorhab... 94 7e-18
gi|3127936|emb|CAA06690.1| nuclear receptor [Tenebrio molitor] 94 7e-18
gi|10198057|gb|AAG15163.1| nuclear receptor NHR-62 [Caenorhabdit... 94 7e-18
gi|39585773|emb|CAE59975.1| Hypothetical protein CBG03466 [Caeno... 94 7e-18
gi|17541658|ref|NP_501775.1| nuclear Hormone Receptor (55.5 kD) ... 94 7e-18
gi|17508461|ref|NP_492607.1| nuclear Hormone Receptor (58.1 kD) ... 94 7e-18
gi|6980611|pdb|1BY4|A Chain A, Structure And Mechanism Of The Ho... 94 9e-18
gi|47226349|emb|CAG09317.1| unnamed protein product [Tetraodon n... 94 9e-18
gi|18859345|ref|NP_571228.1| retinoid x receptor, gamma; etID309... 94 1e-17
gi|39582349|emb|CAE67598.1| Hypothetical protein CBG13142 [Caeno... 94 1e-17
gi|1583309|prf||2120366D retinoid X receptor:ISOTYPE=gamma 94 1e-17
gi|7508351|pir||T25211 hypothetical protein T23H4.2 - Caenorhabd... 93 2e-17
gi|3608378|gb|AAC72723.1| nuclear transcription factor 4 homolog... 93 2e-17
gi|3608380|gb|AAC72724.1| nuclear transcription factor 4 homolog... 93 2e-17
gi|32563633|ref|NP_492615.2| nuclear Hormone Receptor (nhr-69) [... 93 2e-17
gi|8478106|sp|Q90416|RXRA_BRARE RETINOIC ACID RECEPTOR RXR-ALPHA... 93 2e-17
gi|41282088|ref|NP_571292.2| retinoid x receptor, alpha; retinoi... 93 2e-17
gi|10720045|sp|Q9WUU6|HN4G_MOUSE Hepatocyte nuclear factor 4-gam... 93 2e-17
gi|2734850|gb|AAB93762.1| hepatocyte nuclear factor 4 isoform a 93 2e-17
gi|39595232|emb|CAE60269.1| Hypothetical protein CBG03848 [Caeno... 93 2e-17
gi|7305147|ref|NP_038948.1| hepatocyte nuclear factor 4, gamma [... 93 2e-17
gi|2734852|gb|AAB93763.1| hepatocyte nuclear factor 4 isoform b 93 2e-17
gi|6983809|emb|CAB75361.1| USP protein [Tenebrio molitor] 92 3e-17
gi|48102347|ref|XP_392769.1| similar to nuclear receptor [Apis m... 92 3e-17
gi|32451843|gb|AAH54649.1| Rxrb protein [Danio rerio] 92 3e-17
gi|24308520|ref|NP_571350.1| retinoid x receptor, beta; retinoid... 92 3e-17
gi|31241051|ref|XP_320944.1| ENSANGP00000017626 [Anopheles gambi... 92 4e-17
gi|10198018|gb|AAG15143.1| nuclear receptor NHR-49 [Caenorhabdit... 92 4e-17
gi|10198014|gb|AAG15141.1| nuclear receptor NHR-49 [Caenorhabdit... 92 4e-17
gi|10946385|gb|AAG24887.1| ultraspiracle isoform-B [Aedes aegypti] 92 4e-17
gi|17508459|ref|NP_492613.1| nuclear Hormone Receptor (52.4 kD) ... 92 4e-17
gi|39595230|emb|CAE60267.1| Hypothetical protein CBG03844 [Caeno... 92 4e-17
gi|32563637|ref|NP_871799.1| nuclear Hormone Receptor (nhr-49) [... 92 4e-17
gi|17508457|ref|NP_492612.1| nuclear Hormone Receptor (52.5 kD) ... 92 4e-17
gi|13274556|gb|AAK17977.1| nuclear receptor NHR-49 [Caenorhabdit... 92 4e-17
gi|10946383|gb|AAG24886.1| ultraspiracle isoform-A [Aedes aegypti] 92 4e-17
gi|33943178|gb|AAQ55293.1| nuclear receptor RXR-l [Locusta migra... 92 4e-17
gi|50757205|ref|XP_415426.1| PREDICTED: similar to Retinoic acid... 92 4e-17
gi|32563635|ref|NP_871798.1| nuclear Hormone Receptor (55.4 kD) ... 92 4e-17
gi|6007621|gb|AAF00981.1| RXR [Locusta migratoria] 92 4e-17
gi|6016234|sp|P79926|HN4B_XENLA Hepatocyte nuclear factor 4-beta... 92 4e-17
gi|47222872|emb|CAF96539.1| unnamed protein product [Tetraodon n... 92 5e-17
gi|6016233|sp|Q91766|HN4A_XENLA Hepatocyte nuclear factor 4-alph... 92 5e-17
gi|27503338|gb|AAH42224.1| Hnf4-prov protein [Xenopus laevis] 92 5e-17
gi|40254475|ref|NP_004124.3| hepatocyte nuclear factor 4, gamma ... 92 5e-17
gi|48102185|ref|XP_392751.1| similar to ultraspiracle protein; R... 91 6e-17
gi|18859343|ref|NP_571313.1| retinoid x receptor, delta; retinoi... 91 6e-17
gi|32565808|ref|NP_501730.2| nuclear Hormone Receptor (nhr-138AN... 91 6e-17
gi|5631312|dbj|BAA82618.1| retinoid X receptor [Polyandrocarpa m... 91 6e-17
gi|18157523|dbj|BAB83838.1| partially supported by GENSCAN and G... 91 6e-17
gi|8118613|gb|AAF73057.1| ultraspiracle protein; RXR [Apis melli... 91 6e-17
gi|17942647|pdb|1HLZ|A Chain A, Crystal Structure Of The Orphan ... 91 6e-17
gi|31221639|ref|XP_317069.1| ENSANGP00000019535 [Anopheles gambi... 91 6e-17
gi|47940249|gb|AAH72132.1| RXR<beta> protein [Xenopus laevis] 91 6e-17
gi|1085220|pir||S47633 RXR protein - African clawed frog >gnl|BL... 91 6e-17
gi|39597915|emb|CAE68607.1| Hypothetical protein CBG14485 [Caeno... 91 6e-17
gi|48475404|gb|AAT44330.1| USP [Plodia interpunctella] 91 6e-17
gi|45430043|ref|NP_991380.1| hepatocyte nuclear factor 4gamma [B... 91 6e-17
gi|548354|sp|Q04913|NR42_XENLA Orphan nuclear receptor NR4A2 (Or... 91 6e-17
gi|47938683|gb|AAH72138.1| Nr4a1-A protein [Xenopus laevis] 91 6e-17
gi|18202151|sp|O76202|USP_CHOFU Ultraspiracle protein homolog >g... 91 6e-17
gi|25012937|gb|AAN71555.1| RH29074p [Drosophila melanogaster] 91 6e-17
gi|34555893|emb|CAC70072.3| Hypothetical protein C28D4.9 [Caenor... 91 6e-17
gi|5804932|emb|CAB53540.1| Rev-ErbAalpha protein [Homo sapiens] 91 6e-17
gi|5834598|emb|CAA89990.2| hepatocyte nuclear factor 4 gamma (HN... 91 8e-17
gi|12644415|sp|Q14541|HN4G_HUMAN Hepatocyte nuclear factor 4-gam... 91 8e-17
gi|840922|emb|CAA60792.1| retinoid X receptor beta [Xenopus laevis] 91 8e-17
gi|34852205|ref|XP_342096.1| similar to Retinoic acid receptor R... 91 8e-17
gi|47216868|emb|CAG11675.1| unnamed protein product [Tetraodon n... 91 8e-17
gi|6601567|gb|AAF19033.1| ultraspiracle [Aedes albopictus] 91 8e-17
gi|1710720|sp|P49743|RXRB_RAT Retinoic acid receptor RXR-beta (N... 91 8e-17
gi|109944|pir||A34418 H-2 region II binding protein - mouse (fra... 91 8e-17
gi|3891716|pdb|1A6Y|B Chain B, Crystal Structure Of Reverb-Dna B... 91 8e-17
gi|3644028|gb|AAC43032.1| nuclear hormone receptor DNA binding p... 91 8e-17
gi|3891715|pdb|1A6Y|A Chain A, Crystal Structure Of Reverb-Dna B... 91 8e-17
gi|16118883|gb|AAL14642.1| retinoid X receptor beta [Mustela vison] 91 8e-17
gi|1710810|sp|P51129|RXRG_XENLA RETINOIC ACID RECEPTOR RXR-GAMMA... 91 8e-17
gi|2895868|gb|AAC03056.1| ultraspiracle [Chironomus tentans] 91 8e-17
gi|47229086|emb|CAG03838.1| unnamed protein product [Tetraodon n... 91 8e-17
gi|337720|gb|AAA60293.1| retinoid X receptor beta 91 8e-17
gi|11415052|ref|NP_068811.1| retinoid X receptor, beta; MHC clas... 91 8e-17
gi|542994|pir||S37781 retinoid X receptor beta - human 91 8e-17
gi|18044456|gb|AAH19432.1| Rxrb protein [Mus musculus] 91 8e-17
gi|13489062|ref|NP_035436.1| retinoid X receptor beta [Mus muscu... 91 8e-17
gi|483195|pir||D41727 retinoid X receptor beta - mouse 91 8e-17
gi|7709422|gb|AAA40081.2| retinoid X receptor beta [Mus musculus] 91 8e-17
gi|7446194|pir||JC6095 hepatocyte nuclear factor 4 gamma chain -... 91 8e-17
gi|21464740|gb|AAM54495.1| ultraspiracle protein [Spodoptera fru... 91 8e-17
gi|39583063|emb|CAE60603.1| Hypothetical protein CBG04240 [Caeno... 91 8e-17
gi|27372315|dbj|BAC53670.1| ultraspiracle [Chilo suppressalis] 91 8e-17
gi|285011|pir||S26669 retinoic acid receptor X-beta - mouse >gnl... 91 8e-17
gi|19919404|gb|AAM08268.1| nuclear receptor RXR [Dirofilaria imm... 91 8e-17
gi|112259|pir||A41651 retinoic acid receptor coregulator - rat >... 91 8e-17
gi|49114890|gb|AAH73179.1| Rxrb-A-prov protein [Xenopus laevis] 91 8e-17
gi|46237552|emb|CAE83933.1| retinoid X receptor beta [Rattus nor... 91 8e-17
gi|1345734|sp|P49700|USP_BOMMO Ultraspiracle protein homolog (RX... 91 8e-17
gi|50345002|ref|NP_001002173.1| zgc:92434 [Danio rerio] >gnl|BL_... 91 8e-17
gi|13699898|gb|AAC32789.2| retinoid X receptor homolog [Celuca p... 91 1e-16
gi|292834|gb|AAA36763.1| TR3 orphan receptor >gnl|BL_ORD_ID|1044... 91 1e-16
gi|21361342|ref|NP_002126.2| nuclear receptor subfamily 4, group... 91 1e-16
gi|1709262|sp|P51666|NR41_CANFA Orphan nuclear receptor NR4A1 (O... 91 1e-16
gi|48145525|emb|CAG32985.1| NR4A1 [Homo sapiens] 91 1e-16
gi|28396083|gb|AAO39203.1| nuclear receptor NHR-114 [Caenorhabdi... 91 1e-16
gi|47213822|emb|CAF95413.1| unnamed protein product [Tetraodon n... 91 1e-16
gi|4930008|pdb|1CIT|A Chain A, Dna-Binding Mechanism Of The Mono... 91 1e-16
gi|13242297|ref|NP_077364.1| immediate early gene transcription ... 91 1e-16
gi|25153807|ref|NP_741480.1| nuclear Hormone Receptor (nhr-34) [... 91 1e-16
gi|28396079|gb|AAO39201.1| nuclear receptor NHR-114 [Caenorhabdi... 91 1e-16
gi|47214969|emb|CAG01303.1| unnamed protein product [Tetraodon n... 91 1e-16
gi|7504684|pir||T22948 hypothetical protein F58G6.5 - Caenorhabd... 91 1e-16
gi|6754216|ref|NP_034574.1| nuclear receptor subfamily 4, group ... 91 1e-16
gi|53315|emb|CAA42718.1| N10 nuclear protein [Mus musculus] 91 1e-16
gi|3098336|gb|AAC15589.1| retinoid X receptor [Amblyomma america... 91 1e-16
gi|5902068|ref|NP_008848.1| retinoid X receptor, gamma [Homo sap... 91 1e-16
gi|6677829|ref|NP_033133.1| retinoid X receptor gamma [Mus muscu... 91 1e-16
gi|285012|pir||S26670 retinoic acid receptor X-gamma - mouse >gn... 91 1e-16
gi|34880904|ref|XP_341152.1| retinoid X receptor gamma [Rattus n... 91 1e-16
gi|1709263|sp|P22829|NR41_RAT Orphan nuclear receptor NR4A1 (Orp... 91 1e-16
gi|39582376|emb|CAE74760.1| Hypothetical protein CBG22587 [Caeno... 91 1e-16
gi|27960450|gb|AAO27833.1| nuclear receptor protein [Caenorhabdi... 91 1e-16
gi|386369|gb|AAB27245.1| retinoid-X receptor-gamma isoform 2; mR... 91 1e-16
gi|33416666|gb|AAH56025.1| Nr4a1-prov protein [Xenopus laevis] 91 1e-16
gi|10197989|gb|AAG15129.1| nuclear receptor NHR-34 [Caenorhabdit... 91 1e-16
gi|49457135|emb|CAG46888.1| HNF4G [Homo sapiens] 91 1e-16
gi|45384188|ref|NP_990408.1| SF-1/Ad4BP [Gallus gallus] >gnl|BL_... 91 1e-16
gi|17565736|ref|NP_504164.1| nuclear Hormone Receptor (nhr-114) ... 91 1e-16
gi|2780196|emb|CAA11109.1| retinoic acid X receptor gamma-1 [Rat... 91 1e-16
gi|30584675|gb|AAP36590.1| Homo sapiens nuclear receptor subfami... 91 1e-16
gi|47077635|dbj|BAD18699.1| unnamed protein product [Homo sapiens] 91 1e-16
gi|40886675|gb|AAR96256.1| retinoid X receptor gamma [Sus scrofa] 91 1e-16
gi|33468584|emb|CAE30390.1| SI:zC167P9.1 (novel protein similar ... 90 1e-16
gi|4586618|dbj|BAA76713.1| SF-1/Ad4BP [Gallus gallus] 90 1e-16
gi|38492970|pdb|1R0N|A Chain A, Crystal Structure Of Heterodimer... 90 1e-16
gi|6318676|gb|AAF06997.1| nuclear hormone receptor [Onchocerca v... 90 1e-16
gi|49036491|sp|Q95L87|STF1_MACEU Steroidogenic factor 1 (STF-1) ... 90 1e-16
gi|18858747|ref|NP_571331.1| nuclear receptor subfamily 6, group... 90 1e-16
gi|28396081|gb|AAO39202.1| nuclear receptor NHR-114 [Caenorhabdi... 90 1e-16
gi|2148007|pir||I51256 retinoic acid receptor alpha - zebra fish... 90 2e-16
gi|24638448|ref|NP_571481.1| retinoic acid receptor alpha-2.A; z... 90 2e-16
gi|2135342|pir||JC4938 hepatocyte nuclear factor 4C - human >gnl... 90 2e-16
gi|17541660|ref|NP_502856.1| nuclear Hormone Receptor (nhr-5) [C... 90 2e-16
gi|33386531|emb|CAD45002.1| retinoid X receptor beta [Takifugu r... 90 2e-16
gi|47225542|emb|CAG12025.1| unnamed protein product [Tetraodon n... 90 2e-16
gi|1843522|gb|AAB48082.1| hepatocyte nuclear factor 4-alpha [Hom... 90 2e-16
gi|7446193|pir||JC6096 hepatocyte nuclear factor 4 alpha2 chain ... 90 2e-16
gi|47199347|emb|CAF88861.1| unnamed protein product [Tetraodon n... 90 2e-16
gi|25152775|ref|NP_501738.2| nuclear Hormone Receptor (49.0 kD) ... 90 2e-16
gi|21310109|gb|AAM46150.1| nuclear orphan receptor TR2/4 [Branch... 90 2e-16
gi|17367840|sp|Q9W5Z3|RRA_FUGRU Retinoic acid receptor alpha (RA... 90 2e-16
gi|112415|pir||A36471 transcription factor HNF-4 - rat >gnl|BL_O... 90 2e-16
gi|9453875|dbj|BAB03286.1| hepatocyte nuclear factor 4 [Tamias s... 90 2e-16
gi|32454391|gb|AAP82997.1| hepatocyte nuclear factor 4alpha [Bos... 90 2e-16
gi|227511|prf||1705219A hepatocyte nuclear factor 4 90 2e-16
gi|1595752|emb|CAA61133.1| Hepatocyte nuclear factor 4A [Homo sa... 90 2e-16
gi|7504977|pir||T23126 hypothetical protein H27C11.1 - Caenorhab... 90 2e-16
gi|39588802|emb|CAE58326.1| Hypothetical protein CBG01439 [Caeno... 90 2e-16
gi|50539758|ref|NP_001002345.1| zgc:92183 [Danio rerio] >gnl|BL_... 90 2e-16
gi|45387535|ref|NP_991109.1| Unknown (protein for MGC:77387); wu... 90 2e-16
gi|11559939|ref|NP_071516.1| hepatocyte nuclear factor 4 alpha; ... 90 2e-16
gi|6166208|sp|P41235|HN4A_HUMAN Hepatocyte nuclear factor 4-alph... 90 2e-16
gi|2135341|pir||JC4937 hepatocyte nuclear factor 4, splice form ... 90 2e-16
gi|575253|emb|CAA54248.1| hepatocyte nuclear factor 4 [Homo sapi... 90 2e-16
gi|1346306|sp|P49698|HN4A_MOUSE Hepatocyte nuclear factor 4-alph... 90 2e-16
gi|44885904|dbj|BAD12053.1| ultraspiracle protein [Lucilia seric... 90 2e-16
gi|34555806|emb|CAC70099.2| Hypothetical protein F58G6.5b [Caeno... 90 2e-16
gi|31077209|ref|NP_849181.1| hepatocyte nuclear factor 4 alpha i... 90 2e-16
gi|31077207|ref|NP_849180.1| hepatocyte nuclear factor 4 alpha i... 90 2e-16
gi|50758697|ref|XP_417376.1| PREDICTED: similar to hepatocyte nu... 90 2e-16
gi|4972008|emb|CAB43871.1| retinoic acid receptor alpha-2 [Takif... 90 2e-16
gi|1718061|sp|P54779|USP_MANSE Ultraspiracle protein homolog >gn... 90 2e-16
gi|34555807|emb|CAE46673.1| Hypothetical protein F58G6.5c [Caeno... 90 2e-16
gi|46575916|ref|NP_032287.2| hepatic nuclear factor 4; HNF4 alph... 90 2e-16
gi|31077205|ref|NP_000448.3| hepatocyte nuclear factor 4 alpha i... 90 2e-16
gi|14624971|gb|AAG01569.1| ultraspiracle protein [Lucilia cuprina] 90 2e-16
gi|45384256|ref|NP_990625.1| retinoic acid receptor [Gallus gall... 90 2e-16
gi|47226025|emb|CAG04399.1| unnamed protein product [Tetraodon n... 90 2e-16
gi|35902797|ref|NP_919349.1| hepatocyte nuclear factor 4, alpha ... 89 2e-16
gi|3810967|dbj|BAA34092.1| FTZ-F1 related protein [Homo sapiens] 89 2e-16
gi|45545405|ref|NP_995582.1| nuclear receptor subfamily 5, group... 89 2e-16
gi|2944393|gb|AAD03248.1| alpha1-fetoprotein transcription facto... 89 2e-16
gi|17979668|gb|AAL50350.1| hormone receptor 4 [Manduca sexta] 89 2e-16
gi|3929579|gb|AAC80008.1| retinoic acid X receptor [Tripedalia c... 89 2e-16
gi|34194038|gb|AAH56550.1| Hnf4a protein [Danio rerio] 89 2e-16
gi|1947098|gb|AAD03155.1| alpha1-fetoprotein transcription facto... 89 2e-16
gi|5059065|gb|AAD38900.1| nuclear receptor GRF [Bombyx mori] 89 2e-16
gi|21464746|gb|AAM54498.1| hormone receptor 4 [Trichoplusia ni] 89 2e-16
gi|11493783|gb|AAG35649.1| steroidogenic factor 2 [Equus caballus] 89 2e-16
gi|4504343|ref|NP_003813.1| nuclear receptor subfamily 5, group ... 89 2e-16
gi|45384182|ref|NP_990409.1| FTF/LRH-1 [Gallus gallus] >gnl|BL_O... 89 2e-16
gi|2119673|pir||JC4972 steroidogenic factor 1 - human >gnl|BL_OR... 89 3e-16
gi|21464744|gb|AAM54497.1| ultraspiracle protein [Trichoplusia ni] 89 3e-16
gi|38492974|pdb|1R0O|A Chain A, Crystal Structure Of The Heterod... 89 3e-16
gi|1054912|gb|AAB19174.1| orphan steroid hormone receptor 2 89 3e-16
gi|3098334|gb|AAC15588.1| retinoid X receptor [Amblyomma america... 89 3e-16
gi|14133772|gb|AAK54127.1| nuclear receptor nhr-7A [Dirofilaria ... 89 3e-16
gi|14133778|gb|AAK54129.1| nuclear receptor nhr-7C [Dirofilaria ... 89 3e-16
gi|4165446|emb|CAA22836.1| EG:133E12.2 [Drosophila melanogaster] 89 3e-16
gi|31229063|ref|XP_318161.1| ENSANGP00000003675 [Anopheles gambi... 89 3e-16
gi|45553962|ref|NP_996331.1| CG16902-PB [Drosophila melanogaster... 89 3e-16
gi|8096|emb|CAA36827.1| unnamed protein product [Drosophila mela... 89 3e-16
gi|103409|pir||A35872 steroid hormone receptor-like related prot... 89 3e-16
gi|47207654|emb|CAF91378.1| unnamed protein product [Tetraodon n... 89 3e-16
gi|7305321|ref|NP_038867.1| nuclear receptor subfamily 1, group ... 89 3e-16
gi|4322471|gb|AAD16050.1| nuclear orphan receptor LXR-alpha [Mus... 89 3e-16
gi|24639230|ref|NP_569967.2| CG16902-PA [Drosophila melanogaster... 89 3e-16
gi|17136580|ref|NP_476781.1| CG4380-PA [Drosophila melanogaster]... 89 3e-16
gi|47124048|gb|AAH70035.1| NR1D2 protein [Homo sapiens] 89 4e-16
gi|17535329|ref|NP_497074.1| nuclear Hormone Receptor (46.5 kD) ... 89 4e-16
gi|4104218|gb|AAD01975.1| steroidogenic factor 1 [Trachemys scri... 89 4e-16
gi|13928864|ref|NP_113815.1| nuclear receptor subfamily 1, group... 89 4e-16
gi|48146985|emb|CAG33715.1| NR1D2 [Homo sapiens] 89 4e-16
gi|40254810|ref|NP_005117.2| nuclear receptor subfamily 1, group... 89 4e-16
gi|2135867|pir||A57057 orphan nuclear hormone receptor BD73 - hu... 89 4e-16
gi|6166580|sp|Q14995|NRD2_HUMAN Orphan nuclear receptor NR1D2 (R... 89 4e-16
gi|47223458|emb|CAF97945.1| unnamed protein product [Tetraodon n... 89 4e-16
gi|3891396|pdb|1RXR| High Resolution Solution Structure Of The ... 89 4e-16
gi|92882|pir||A30226 thyroid/steroid hormone receptor - rat 89 4e-16
gi|21955255|ref|NP_665718.1| nuclear receptor subfamily 1, group... 89 4e-16
gi|8895462|gb|AAF80975.1| retonoic acid receptor gamma 2 [Ambyst... 89 4e-16
gi|38303953|gb|AAH62047.1| Nr1d1 protein [Rattus norvegicus] 89 4e-16
gi|507211|gb|AAC52144.1| Rev-Erb-beta 89 4e-16
gi|21703866|ref|NP_663409.1| nuclear receptor subfamily 1, group... 89 4e-16
gi|695709|emb|CAA55014.1| Rev-erb-Beta2 [Rattus norvegicus] 89 4e-16
gi|22219446|ref|NP_671743.1| nuclear receptor subfamily 1, group... 89 4e-16
gi|2500906|sp|Q24142|HR78_DROME NUCLEAR HORMONE RECEPTOR HR78 (D... 89 4e-16
gi|687735|gb|AAA62508.1| Rev-ErbA-beta 89 4e-16
gi|24668103|ref|NP_730636.1| CG7199-PB [Drosophila melanogaster]... 89 4e-16
gi|951325|gb|AAC46924.1| nuclear receptor XR78E/F 89 4e-16
gi|21310107|gb|AAM46149.1| retinoic acid receptor [Branchiostoma... 89 4e-16
gi|10198051|gb|AAG15160.1| nuclear receptor NHR-61 [Caenorhabdit... 89 4e-16
gi|10198047|gb|AAG15158.1| nuclear receptor NHR-61 [Caenorhabdit... 89 4e-16
gi|17535327|ref|NP_497073.1| nuclear Hormone Receptor (46.9 kD) ... 89 4e-16
gi|26344309|dbj|BAC35811.1| unnamed protein product [Mus musculus] 89 4e-16
gi|16797872|gb|AAL29194.1| nuclear receptor AmNR2 [Acropora mill... 89 4e-16
gi|31241825|ref|XP_321343.1| ENSANGP00000011619 [Anopheles gambi... 89 4e-16
gi|19070135|gb|AAL83722.1| nuclear orphan receptor [Bombyx mori] 89 4e-16
gi|8895460|gb|AAF80974.1| retinoic acid receptor gamma 1 [Ambyst... 89 4e-16
gi|6166581|sp|Q60674|NRD2_MOUSE Orphan nuclear receptor NR1D2 (R... 89 4e-16
gi|31543338|ref|NP_035714.2| nuclear receptor subfamily 1, group... 89 4e-16
gi|85682|pir||S06124 retinoic acid receptor delta - eastern newt... 89 4e-16
gi|14994043|gb|AAK76396.1| Rev-Erb beta 2 [Danio rerio] 89 4e-16
gi|1843450|emb|CAA49562.1| largest of the predicted retinoic aci... 89 4e-16
gi|13430848|ref|NP_068370.1| nuclear receptor subfamily 1, group... 89 4e-16
gi|1173170|sp|P18516|RRG_NOTVI Retinoic acid receptor gamma (RAR... 89 4e-16
gi|50233771|ref|NP_571140.1| rev erb beta 2; Rev-Erb beta 2; rev... 89 4e-16
gi|6166582|sp|Q63504|NRD2_RAT Orphan nuclear receptor NR1D2 (Rev... 89 4e-16
gi|31213473|ref|XP_315680.1| ENSANGP00000007312 [Anopheles gambi... 88 5e-16
gi|44355486|gb|AAS47030.1| steroidogenic factor 1 [Pleurodeles w... 88 5e-16
gi|3093388|emb|CAA06670.1| thr4 [Tenebrio molitor] 88 5e-16
gi|15426034|gb|AAK97659.1| steroidogenic factor 1 [Taeniopygia g... 88 5e-16
gi|45383934|ref|NP_990536.1| nuclear receptor subfamily 1, group... 88 5e-16
gi|47229201|emb|CAG03953.1| unnamed protein product [Tetraodon n... 88 5e-16
gi|15451850|ref|NP_201592.1| nuclear receptor subfamily 6, group... 88 7e-16
gi|7506532|pir||T28881 hypothetical protein R09G11.2 - Caenorhab... 88 7e-16
gi|21040480|gb|AAH30600.1| Nuclear receptor subfamily 6, group A... 88 7e-16
gi|47228660|emb|CAG07392.1| unnamed protein product [Tetraodon n... 88 7e-16
gi|13492975|ref|NP_068510.1| FTZ-F1 beta1 protein; FTZ-F1 beta; ... 88 7e-16
gi|14010847|ref|NP_109601.1| nuclear receptor subfamily 5, group... 88 7e-16
gi|15451848|ref|NP_201591.1| nuclear receptor subfamily 6, group... 88 7e-16
gi|12643728|sp|Q15406|NR61_HUMAN Orphan nuclear receptor NR6A1 (... 88 7e-16
gi|20302778|gb|AAM18898.1| unknown [Branchiostoma floridae] 88 7e-16
gi|15145791|gb|AAK54449.1| nuclear receptor FF1aE [Danio rerio] 88 7e-16
gi|15451846|ref|NP_001480.2| nuclear receptor subfamily 6, group... 88 7e-16
gi|24308525|ref|NP_571414.1| retinoic acid receptor gamma; etID3... 88 7e-16
gi|25147899|ref|NP_510834.2| nuclear Hormone Receptor (nhr-1) [C... 88 7e-16
gi|34853889|ref|XP_342428.1| similar to germ cell nuclear factor... 88 7e-16
gi|28396008|gb|AAO39167.1| nuclear receptor NHR-1 [Caenorhabditi... 88 7e-16
gi|4126870|dbj|BAA36789.1| SF-1/Ad4BP [Rana rugosa] 88 7e-16
gi|45686253|gb|AAS75791.1| FTZ-F1 [Acanthopagrus schlegelii] 88 7e-16
gi|8980871|gb|AAF82307.1| nuclear receptor FTZ-F1 protein [Aedes... 88 7e-16
gi|215028|gb|AAB59953.1| retinoic acid receptor gamma-2 88 7e-16
gi|280730|pir||A43786 retinoic acid receptor beta-4 - chicken >g... 88 7e-16
gi|49115842|gb|AAH73584.1| Unknown (protein for MGC:82881) [Xeno... 88 7e-16
gi|39598319|emb|CAE69012.1| Hypothetical protein CBG15006 [Caeno... 88 7e-16
gi|31249880|gb|AAP46279.1| Nuclear hormone receptor family prote... 88 7e-16
gi|1408464|gb|AAC52645.1| alpha1-fetoprotein transcription factor 88 7e-16
gi|6753956|ref|NP_034394.1| nuclear receptor subfamily 6, group ... 88 7e-16
gi|47207712|emb|CAF92683.1| unnamed protein product [Tetraodon n... 88 7e-16
gi|39590909|emb|CAE58689.1| Hypothetical protein CBG01866 [Caeno... 88 7e-16
gi|4107119|dbj|BAA36340.1| FTZ-F1 beta2 [Rattus norvegicus] 88 7e-16
gi|29351682|gb|AAH49301.1| Rara2b protein [Danio rerio] 88 7e-16
gi|24158439|ref|NP_571538.1| nuclear receptor subfamily 5, group... 88 7e-16
gi|7496469|pir||T34118 hypothetical protein C25B8.6 - Caenorhabd... 87 9e-16
gi|304811|gb|AAA28915.1| steroid receptor beta FTZ-F1 87 9e-16
gi|104175|pir||A38592 retinoic acid receptor gamma-2 - African c... 87 9e-16
gi|1839486|gb|AAB47115.1| retinoic acid receptor gamma isoform 2... 87 9e-16
gi|1839488|gb|AAB47116.1| retinoic acid receptor gamma isoform 2... 87 9e-16
gi|215026|gb|AAA50050.1| retinoic acid receptor alpha-2.B 87 9e-16
gi|28558767|sp|P28699|RRG_XENLA Retinoic acid receptor gamma (RA... 87 9e-16
gi|24666434|ref|NP_524143.2| CG4059-PB [Drosophila melanogaster]... 87 9e-16
gi|17367843|sp|Q9W6B3|RRB_COTJA Retinoic acid receptor beta (RAR... 87 9e-16
gi|45384512|ref|NP_990657.1| retinoic acid receptor beta [Gallus... 87 9e-16
gi|104852|pir||S13512 retinoic acid receptor beta-1 - chicken >g... 87 9e-16
gi|24666438|ref|NP_730359.1| CG4059-PA [Drosophila melanogaster]... 87 9e-16
gi|1515433|gb|AAC60126.1| xGCNF 87 9e-16
gi|25151791|ref|NP_509116.2| nuclear Hormone Receptor (54.9 kD) ... 87 9e-16
gi|62977|emb|CAA40616.1| retinoic acid receptor beta [Gallus gal... 87 9e-16
gi|234371|gb|AAB19628.1| retinoic acid receptor-beta; RAR-beta [... 87 9e-16
gi|62979|emb|CAA40615.1| retinoic acid receptor beta,isoform 4 [... 87 9e-16
gi|14994041|gb|AAK76395.1| Rev-Erb beta 1 [Danio rerio] 87 9e-16
gi|7511864|pir||T13733 FTZ-F1 protein - fruit fly (Drosophila me... 87 9e-16
gi|5306097|gb|AAD41899.1| fushi tarazu-factor 1 [Metapenaeus ensis] 87 1e-15
gi|1710711|sp|P51126|RRA_XENLA Retinoic acid receptor alpha (RAR... 87 1e-15
gi|47939545|gb|AAH71733.1| Unknown (protein for MGC:88071) [Homo... 87 1e-15
gi|9955273|pdb|1DSZ|A Chain A, Structure Of The RxrRAR DNA-Bindi... 87 1e-15
gi|1314308|gb|AAB00112.1| nucleophosmin-retinoic acid receptor a... 87 1e-15
gi|35874|emb|CAA29787.1| unnamed protein product [Homo sapiens] 87 1e-15
gi|451663|gb|AAA18357.1| Ftz-F1-related orphan receptor B 87 1e-15
gi|17380507|sp|P10826|RRB_HUMAN Retinoic acid receptor beta (RAR... 87 1e-15
gi|8815561|gb|AAB19602.2| retinoic acid receptor alpha; RAR alph... 87 1e-15
gi|7638251|gb|AAF65452.1| ECFP-retinoic acid receptor alpha fusi... 87 1e-15
gi|2661447|emb|CAA05768.1| retinoic acid receptor alpha2 [Rattus... 87 1e-15
gi|1314310|gb|AAB00113.1| nucleophosmin-retinoic acid receptor a... 87 1e-15
gi|22859106|emb|CAA55132.1| retinoic acid receptor alpha isoform... 87 1e-15
gi|14916494|ref|NP_000956.2| retinoic acid receptor, beta isofor... 87 1e-15
gi|32026|emb|CAA68398.1| unnamed protein product [Homo sapiens] 87 1e-15
gi|18031835|gb|AAL02361.1| retinoic acid receptor beta-2 [Mesocr... 87 1e-15
gi|2119680|pir||B56558 retinoic acid receptor isoform alpha 2.2 ... 87 1e-15
gi|35883|emb|CAA30262.1| unnamed protein product [Homo sapiens] 87 1e-15
gi|45593124|ref|NP_035373.1| retinoic acid receptor, beta; RAR b... 87 1e-15
gi|23504267|emb|CAA52153.2| retinoic acid receptor gamma 2 isofo... 87 1e-15
gi|2119679|pir||A56558 retinoic acid receptor isoform alpha 2.1 ... 87 1e-15
gi|2119682|pir||I50674 retinoic acid receptor alpha isoform 2-1 ... 87 1e-15
gi|3510458|gb|AAC33511.1| nuclear mitotic apparatus protein-reti... 87 1e-15
gi|2661445|emb|CAA05767.1| retinoic acid receptor alpha1 [Rattus... 87 1e-15
gi|3046863|dbj|BAA25569.1| retinoic acid receptor homologue [Pol... 87 1e-15
gi|2661449|emb|CAA05769.1| retinoic acid receptor beta2 [Rattus ... 87 1e-15
gi|190125|gb|AAA60126.1| PML-RAR protein 87 1e-15
gi|6677671|ref|NP_033050.1| retinoic acid receptor, alpha; RAR a... 87 1e-15
gi|45383107|ref|NP_989867.1| retinoic acid receptor alpha 1 isof... 87 1e-15
gi|283822|pir||A41977 retinoic acid receptor alpha - African cla... 87 1e-15
gi|13928712|ref|NP_113716.1| retinoic acid receptor, alpha [Ratt... 87 1e-15
gi|18031833|gb|AAL02360.1| retinoic acid receptor alpha [Mesocri... 87 1e-15
gi|1498066|gb|AAB06335.1| nuclear orphan receptor 87 1e-15
gi|545176|gb|AAB29813.1| retinoic acid receptor alpha, RAR alpha... 87 1e-15
gi|1743345|emb|CAA71177.1| retinoic acid receptor-alpha [Mus spr... 87 1e-15
gi|4506419|ref|NP_000955.1| retinoic acid receptor, alpha; Retin... 87 1e-15
gi|133494|sp|P22605|RRB_MOUSE Retinoic acid receptor beta (RAR-b... 87 1e-15
gi|4160009|gb|AAD05222.1| retinoic acid receptor alpha [Homo sap... 87 1e-15
gi|425578|gb|AAB28339.1| embryonal long terminal repeat-binding ... 87 1e-15
gi|20070193|ref|NP_004950.2| nuclear receptor subfamily 5, group... 87 1e-15
gi|27806027|ref|NP_776828.1| nuclear receptor subfamily 5, group... 87 1e-15
gi|4506423|ref|NP_000957.1| retinoic acid receptor, gamma; retin... 87 1e-15
gi|47938910|gb|AAH72462.1| RARG protein [Homo sapiens] 87 1e-15
gi|39590562|emb|CAE64932.1| Hypothetical protein CBG09761 [Caeno... 87 1e-15
gi|28574950|ref|NP_648183.3| CG7404-PB [Drosophila melanogaster]... 87 1e-15
gi|33879052|gb|AAH19098.2| RARG protein [Homo sapiens] 87 1e-15
gi|18860920|ref|NP_004442.3| estrogen-related receptor alpha; es... 87 1e-15
gi|53891|emb|CAA40749.1| retinoic acid receptor-alpha [Mus muscu... 87 1e-15
gi|18373318|ref|NP_445796.1| nuclear receptor subfamily 5, group... 87 1e-15
gi|39645103|gb|AAH63795.1| Unknown (protein for IMAGE:6527166) [... 87 1e-15
gi|133484|sp|P11416|RRA_MOUSE Retinoic acid receptor alpha (RAR-... 87 1e-15
gi|13124731|sp|O08580|ERR1_MOUSE Steroid hormone receptor ERR1 (... 87 1e-15
gi|1703163|sp|P33242|STF1_MOUSE Steroidogenic factor 1 (STF-1) (... 87 1e-15
gi|20522231|ref|NP_620639.1| nuclear receptor subfamily 5, group... 87 1e-15
gi|7416833|dbj|BAA94078.1| FTZ-F1 beta [Rana rugosa] 87 1e-15
gi|23503089|sp|Q13133|NRH3_HUMAN Oxysterols receptor LXR-alpha (... 87 1e-15
gi|34861520|ref|XP_215174.2| similar to Steroid hormone receptor... 87 1e-15
gi|133501|sp|P20787|RRG2_MOUSE Retinoic acid receptor gamma-B (R... 87 1e-15
gi|50080132|dbj|BAD27472.1| thyroid hormone receptor beta 2 [Con... 87 1e-15
gi|88644|pir||A29345 steroid hormone receptor ERR1 precursor - h... 87 1e-15
gi|27371228|gb|AAH41172.1| NR1H3 protein [Homo sapiens] 87 1e-15
gi|34868575|ref|XP_217064.2| similar to retinoic acid receptor g... 87 1e-15
gi|1805353|dbj|BAA19127.1| ELP3 [Mus musculus] 87 1e-15
gi|1239957|gb|AAB17015.1| estrogen receptor-related protein [Hom... 87 1e-15
gi|21310111|gb|AAM46151.1| nuclear hormone receptor RXR [Branchi... 87 1e-15
gi|18031837|gb|AAL02362.1| retinoic acid receptor gamma-2 [Mesoc... 87 1e-15
gi|10945629|gb|AAG24622.1| steroidogenic factor 1 [Ovis aries] 87 1e-15
gi|133500|sp|P22932|RRG2_HUMAN Retinoic acid receptor gamma-2 (R... 87 1e-15
gi|40353037|gb|AAH64524.1| Unknown (protein for IMAGE:5738222) [... 87 1e-15
gi|284743|pir||A42128 embryonal long terminal repeat-binding pro... 87 1e-15
gi|24660692|ref|NP_729340.1| CG7404-PA [Drosophila melanogaster]... 87 1e-15
gi|6166152|sp|P11474|ERR1_HUMAN Steroid hormone receptor ERR1 (E... 87 1e-15
gi|42559320|gb|AAS20260.1| estrogen-related receptor alpha [Cani... 87 1e-15
gi|6679693|ref|NP_031979.1| estrogen related receptor, alpha; es... 87 1e-15
gi|7416831|dbj|BAA94077.1| FTZ-F1 alpha [Rana rugosa] 87 1e-15
gi|31560805|ref|NP_035374.2| retinoic acid receptor, gamma; RAR ... 87 1e-15
gi|15489203|gb|AAH13709.1| Rarg protein [Mus musculus] 87 1e-15
gi|7441781|pir||A34714 retinoic acid receptor gamma-1 - mouse >g... 87 1e-15
gi|10198094|gb|AAG15181.1| nuclear receptor NHR-91 [Caenorhabdit... 86 2e-15
gi|39588306|emb|CAE72657.1| Hypothetical protein CBG19870 [Caeno... 86 2e-15
gi|17569107|ref|NP_510536.1| nuclear Hormone Receptor (53.3 kD) ... 86 2e-15
gi|39584628|emb|CAE72381.1| Hypothetical protein CBG19535 [Caeno... 86 2e-15
gi|10198098|gb|AAG15183.1| nuclear receptor NHR-91 [Caenorhabdit... 86 2e-15
gi|5031893|ref|NP_005684.1| nuclear receptor subfamily 1, group ... 86 2e-15
gi|727415|gb|AAA64285.1| FTZ-F1-related nuclear orphan receptor ... 86 2e-15
gi|27803710|gb|AAO21918.1| nuclear receptor subfamily 5 group A ... 86 2e-15
gi|39598310|emb|CAE69003.1| Hypothetical protein CBG14996 [Caeno... 86 2e-15
gi|16797884|gb|AAL29200.1| nuclear receptor AmNR7 [Acropora mill... 86 2e-15
gi|20975727|emb|CAC95232.1| peroxisomal proliferator-activated r... 86 2e-15
gi|1362680|pir||A56543 Ftz-F1-related orphan receptor A - Africa... 86 2e-15
gi|22023902|gb|AAM89250.1| FTZ-F1 [Carassius auratus] 86 3e-15
gi|50731740|ref|XP_425924.1| PREDICTED: similar to hepatocyte nu... 86 3e-15
gi|47086129|ref|NP_998120.1| estrogen-related receptor alpha; es... 86 3e-15
gi|133495|sp|P18515|RRB_NOTVI RETINOIC ACID RECEPTOR BETA (RAR-B... 86 3e-15
gi|2982698|dbj|BAA25269.1| tFZR1 [Oncorhynchus mykiss] 86 3e-15
gi|48094454|ref|XP_392128.1| similar to ENSANGP00000017216 [Apis... 86 3e-15
gi|47219415|emb|CAG01578.1| unnamed protein product [Tetraodon n... 86 3e-15
gi|226050|prf||1408258A retinoic acid receptor 86 3e-15
gi|37362256|gb|AAQ91256.1| nuclear receptor subfamily 1, group D... 86 3e-15
gi|31247990|ref|XP_316596.1| ENSANGP00000002564 [Anopheles gambi... 86 3e-15
gi|226278|prf||1504304A retinoic acid receptor 86 3e-15
gi|47214970|emb|CAG01304.1| unnamed protein product [Tetraodon n... 86 3e-15
gi|13274548|gb|AAK17973.1| nuclear receptor NHR-23 [Caenorhabdit... 86 3e-15
gi|6166165|sp|Q08893|E75_MANSE Ecdysone-inducible protein E75 86 3e-15
gi|6015044|sp|O01639|E75_CHOFU ECDYSONE-INDUCIBLE PROTEIN E75 >g... 86 3e-15
>gi|25152746|ref|NP_502117.2| nuclear Hormone Receptor (60.4 kD)
(nhr-7) [Caenorhabditis elegans]
gi|10720385|sp|Q20765|NHR7_CAEEL Nuclear hormone receptor family
member nhr-7
gi|11359800|pir||T43349 nuclear receptor NHR-7 - Caenorhabditis
elegans
gi|4139076|gb|AAD03683.1| nuclear receptor NHR-7 [Caenorhabditis
elegans]
gi|18376521|emb|CAB00862.3| C. elegans NHR-7 protein (corresponding
sequence F54D1.4) [Caenorhabditis elegans]
Length = 536
Score = 936 bits (2420), Expect = 0.0
Identities = 475/536 (88%), Positives = 475/536 (88%)
Frame = -1
Query: 1611 MQSYTNRICAVCGDTPAKIHYGVLACFGCKGFFRRAVKDGRNKYVCRFEKNCEVTKFERN 1432
MQSYTNRICAVCGDTPAKIHYGVLACFGCKGFFRRAVKDGRNKYVCRFEKNCEVTKFERN
Sbjct: 1 MQSYTNRICAVCGDTPAKIHYGVLACFGCKGFFRRAVKDGRNKYVCRFEKNCEVTKFERN 60
Query: 1431 ACRYCRFRKCLLVGMNPDYVRPDREXXXXXXXXXXXXXXXXXXXSYRLADPSDWTSFLSP 1252
ACRYCRFRKCLLVGMNPDYVRPDRE SYRLADPSDWTSFLSP
Sbjct: 61 ACRYCRFRKCLLVGMNPDYVRPDREKSKKGKTVLSKKKSVSRSLSYRLADPSDWTSFLSP 120
Query: 1251 SSRKQLSEIGKLAETCSTSTNFDGIGNFSLKSLIADRSLARKTGDSEAMDCSNSPRQLNE 1072
SSRKQLSEIGKLAETCSTSTNFDGIGNFSLKSLIADRSLARKTGDSEAMDCSNSPRQLNE
Sbjct: 121 SSRKQLSEIGKLAETCSTSTNFDGIGNFSLKSLIADRSLARKTGDSEAMDCSNSPRQLNE 180
Query: 1071 QFLGIERIVQCVDYIDRFLVMLEEEHCRKFSVEDKSALISDTMIHLLLFESTSRFVAKGA 892
QFLGIERIVQCVDYIDRFLVMLEEEHCRKFSVEDKSALISDTMIHLLLFESTSRFVAKGA
Sbjct: 181 QFLGIERIVQCVDYIDRFLVMLEEEHCRKFSVEDKSALISDTMIHLLLFESTSRFVAKGA 240
Query: 891 PGLEDLKLSLAQLPICTTHLTQKIADVFETYLRKPPSIIEYSVLKAYIVLSAESTVXXXX 712
PGLEDLKLSLAQLPICTTHLTQKIADVFETYLRKPPSIIEYSVLKAYIVLSAESTV
Sbjct: 241 PGLEDLKLSLAQLPICTTHLTQKIADVFETYLRKPPSIIEYSVLKAYIVLSAESTVLSNS 300
Query: 711 XXXXXXXXXXXXXXXLFKVIKHSRNKTSISAANSLSTILHFVYESRNLASRIRQSQQPFF 532
LFKVIKHSRNKTSISAANSLSTILHFVYESRNLASRIRQSQQPFF
Sbjct: 301 LNESLSLARENLSELLFKVIKHSRNKTSISAANSLSTILHFVYESRNLASRIRQSQQPFF 360
Query: 531 VRDSDPKIPFHKILTDIINPEVSDLLLTTANCRKLSTQMGXXXXXXXXXXXXSDTVXXXX 352
VRDSDPKIPFHKILTDIINPEVSDLLLTTANCRKLSTQMG SDTV
Sbjct: 361 VRDSDPKIPFHKILTDIINPEVSDLLLTTANCRKLSTQMGSSLSSVPPVPPPSDTVPLFH 420
Query: 351 XXXXXXXPCQISAPPPPQQQYTDYSQMPSTSSYPANSSPFQSPYRPNSLSSFPKIPLEMT 172
PCQISAPPPPQQQYTDYSQMPSTSSYPANSSPFQSPYRPNSLSSFPKIPLEMT
Sbjct: 421 FSPPSLSPCQISAPPPPQQQYTDYSQMPSTSSYPANSSPFQSPYRPNSLSSFPKIPLEMT 480
Query: 171 KSIEEFLRPNGMTTDEMNKPLEKNWADGFRLTPVFNKDIVSQFFPELSNINQHHPF 4
KSIEEFLRPNGMTTDEMNKPLEKNWADGFRLTPVFNKDIVSQFFPELSNINQHHPF
Sbjct: 481 KSIEEFLRPNGMTTDEMNKPLEKNWADGFRLTPVFNKDIVSQFFPELSNINQHHPF 536
>gi|39593743|emb|CAE62036.1| Hypothetical protein CBG06052
[Caenorhabditis briggsae]
Length = 537
Score = 774 bits (1999), Expect = 0.0
Identities = 391/538 (72%), Positives = 432/538 (79%), Gaps = 2/538 (0%)
Frame = -1
Query: 1611 MQSYTNRICAVCGDTPAKIHYGVLACFGCKGFFRRAVKDGRNKYVCRFEKNCEVTKFERN 1432
MQSYTNR+CAVCGDTPAKIHYGVLACFGCKGFFRRAVKDGRNKYVCRFEKNCEVTKFERN
Sbjct: 1 MQSYTNRVCAVCGDTPAKIHYGVLACFGCKGFFRRAVKDGRNKYVCRFEKNCEVTKFERN 60
Query: 1431 ACRYCRFRKCLLVGMNPDYVRPDREXXXXXXXXXXXXXXXXXXXSYRLA-DPSDWTSFLS 1255
ACRYCRFRKCLLVGMNPDYVRPDRE S R+A DPSDWTS LS
Sbjct: 61 ACRYCRFRKCLLVGMNPDYVRPDREKSKKGKTLLSKKKSLSRSMSNRMAIDPSDWTSLLS 120
Query: 1254 PSSRKQLSEIGKLAETCSTSTNFDGIGNFSLKSLIADRSLARKTGDSEAMDCSNSPRQLN 1075
PSSRKQL+EI KL+E C+TSTNFDGIGNFSLKSLIADRSLARKTGDSEAMDCS SPRQ +
Sbjct: 121 PSSRKQLTEITKLSEICTTSTNFDGIGNFSLKSLIADRSLARKTGDSEAMDCSTSPRQSS 180
Query: 1074 EQFLGIERIVQCVDYIDRFLVMLEEEHCRKFSVEDKSALISDTMIHLLLFESTSRFVAKG 895
+QF+ IERIVQ VD+IDRFL MLE+EHCRKFSVEDKSALISDT+IHLL FES SRFV KG
Sbjct: 181 DQFISIERIVQNVDFIDRFLNMLEDEHCRKFSVEDKSALISDTLIHLLFFESISRFVVKG 240
Query: 894 APGLEDLKLSLAQLPICTTHLTQKIADVFETYLRKPPSIIEYSVLKAYIVLSAESTVXXX 715
PGLEDLK SL QLP+CT+HLTQK++DVFE +LRKPPSIIEYSVLKAYIV +AEST+
Sbjct: 241 TPGLEDLKTSLLQLPLCTSHLTQKLSDVFEIFLRKPPSIIEYSVLKAYIVTTAESTMISN 300
Query: 714 XXXXXXXXXXXXXXXXLFKVIKHSRNKTSISAANSLSTILHFVYESRNLASRIRQSQQPF 535
LFKVIKHSRNKTSIS+ANSLS ILHF++ES+NL++ +RQSQQPF
Sbjct: 301 SLNESLTLARENLSELLFKVIKHSRNKTSISSANSLSAILHFIFESKNLSTSLRQSQQPF 360
Query: 534 FVRDSDPKIPFHKILTDIINPEVSDLLLTTANCRKLSTQMGXXXXXXXXXXXXSDTVXXX 355
+ RDSD KIPFHKILTDIINPEVSDLL+TTA CRK S Q +TV
Sbjct: 361 YTRDSDLKIPFHKILTDIINPEVSDLLMTTAACRKQSNQQMGPPLSSVPPVQPLETVSLF 420
Query: 354 XXXXXXXXPCQISAPPPPQQQYTDYSQMPSTSSYPANSSPFQSPYRPNSLSSFPKIPLEM 175
P ++ PP PQ Y +YS M STSSYP SSPFQSPYRPNSL+SFPK+PL+M
Sbjct: 421 HFSPPSLSPHPVAPPPQPQPLYPEYS-MQSTSSYPTTSSPFQSPYRPNSLASFPKLPLQM 479
Query: 174 TKSIEEFLRPNGMTTDEMNKPLEKNWADGFRLTPVFNKDIVSQFFPELSNINQHH-PF 4
TKSIE++LRP GMT D+MN+PLEKNWADG RLTP+FNK+IVSQFFPELS+ N HH PF
Sbjct: 480 TKSIEDYLRPTGMTADDMNRPLEKNWADGLRLTPMFNKEIVSQFFPELSHTNHHHQPF 537