BLASTX 2.2.4 [Aug-26-2002]
Query= F47B8_11
         (564 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|17563500|ref|NP_506557.1| Sperm-Specific family, class S SSS-...   353   2e-96
gi|17542102|ref|NP_501780.1| Sperm-Specific family, class S SSS-...   269   2e-71
gi|17542414|ref|NP_501741.1| putative protein family member, wit...   194   9e-49
gi|39580809|emb|CAE58978.1| Hypothetical protein CBG02251 [Caeno...   101   1e-20
gi|17506905|ref|NP_491597.1| putative protein family member, wit...    90   2e-17
gi|49035138|gb|AAF39962.2| Hypothetical protein T02H6.2 [Caenorh...    35   1.2
gi|31209677|ref|XP_313805.1| ENSANGP00000011731 [Anopheles gambi...    34   2.0
gi|6707294|gb|AAF25617.1| interaptin [Oxytricha nova]                  33   3.5
gi|17535939|ref|NP_493796.1| nuclear matrix protein (2A999) [Cae...    33   4.5
gi|46120496|ref|XP_385071.1| predicted protein [Gibberella zeae ...    32   5.9
gi|39580083|emb|CAE73787.1| Hypothetical protein CBG21337 [Caeno...    32   5.9
gi|17510969|ref|NP_492698.1| putative prenylated protein (1K842)...    32   7.7
gi|34541030|ref|NP_905509.1| UDP-N-acetylenolpyruvoylglucosamine...    32   7.7


>gi|17563500|ref|NP_506557.1| Sperm-Specific family, class S SSS-2,
           putative cytoplasmic protein family member, with a
           coiled coil-4 domain (sss-2C) [Caenorhabditis elegans]
 gi|7503648|pir||T22348 hypothetical protein F47B8.11 -
           Caenorhabditis elegans
 gi|3877277|emb|CAB01199.1| C. elegans SSS-2 protein (corresponding
           sequence F47B8.11) [Caenorhabditis elegans]
          Length = 187

 Score =  353 bits (905), Expect = 2e-96
 Identities = 175/187 (93%), Positives = 175/187 (93%)
 Frame = +1

Query: 1   MSPIPTTAETRKINEAAELMVNFWMSFACVEKEKEQMASIFEKMNGLFAAPSTTSTASLF 180
           MSPIPTTAETRKINEAAELMVNFWMSFACVEKEKEQMASIFEKMNGLFAAPSTTSTASLF
Sbjct: 1   MSPIPTTAETRKINEAAELMVNFWMSFACVEKEKEQMASIFEKMNGLFAAPSTTSTASLF 60

Query: 181 GKYEGLFETTEVATEDFNTLWWNYPAQPSFPQLPVFVRSPIDSIKIYGAIQHDFGMSEDE 360
           GKYEGLFETTEVATEDFNTLWWNYPAQPSFPQLPVFVRSPIDSIKIYGAIQHDFGMSEDE
Sbjct: 61  GKYEGLFETTEVATEDFNTLWWNYPAQPSFPQLPVFVRSPIDSIKIYGAIQHDFGMSEDE 120

Query: 361 SVQYXXXXXXXXXXXXETITHVSPGYLLQEVFLQRAVIEEQKKIIDGFHEIQKLNKKLAA 540
           SVQY            ETITHVSPGYLLQEVFLQRAVIEEQKKIIDGFHEIQKLNKKLAA
Sbjct: 121 SVQYPSPISPSSDSSSETITHVSPGYLLQEVFLQRAVIEEQKKIIDGFHEIQKLNKKLAA 180

Query: 541 LHNNFTY 561
           LHNNFTY
Sbjct: 181 LHNNFTY 187

[DB home][top]