Homology by BLASTX


BLASTX 2.2.4 [Aug-26-2002]
Query= F46F11_10
         (990 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|17507397|ref|NP_491648.1| putative nuclear protein (37.9 kD) ...   623   e-177
gi|7503581|pir||T25769 hypothetical protein F46F11.8 - Caenorhab...   537   e-164
gi|39598227|emb|CAE68919.1| Hypothetical protein CBG14898 [Caeno...   243   4e-63
gi|17552148|ref|NP_497233.1| zinc finger (3B280) [Caenorhabditis...    36   1.2
gi|21230606|ref|NP_636523.1| excinuclease ABC subunit A [Xanthom...    35   2.0
gi|21242001|ref|NP_641583.1| excinuclease ABC subunit A [Xanthom...    35   2.0
gi|27693094|gb|AAH43153.1| CTAGE6 protein [Homo sapiens]               35   2.6
gi|41147555|ref|XP_371995.1| similar to hypothetical protein MGC...    35   2.6
gi|34979121|gb|AAQ83696.1| Sp-like zinc finger protein [Triboliu...    35   2.6
gi|4159885|gb|AAD05194.1| unknown [Homo sapiens] >gnl|BL_ORD_ID|...    35   3.5
gi|29428019|sp|Q9N4M4|ANC1_CAEEL Nuclear anchorage protein 1 (An...    35   3.5
gi|42538971|tpg|DAA04553.1| TPA: ANC-1 [Caenorhabditis elegans]        35   3.5
gi|17511139|ref|NP_491353.1| nuclear anchorage protein 1 family ...    35   3.5
gi|46438901|gb|EAK98225.1| hypothetical protein CaO19.3794 [Cand...    34   4.5
gi|4589364|gb|AAD26467.1| suppressor of ROK1 [Candida albicans]        34   4.5
gi|24650050|ref|NP_651389.2| CG11902-PA [Drosophila melanogaster...    33   7.7
gi|13507650|ref|NP_109633.1| zinc finger homeodomain 4 [Mus musc...    33   7.7
gi|13508219|ref|NP_110168.1| valyl-tRNA synthetase [Mycoplasma p...    33   7.7
gi|17945311|gb|AAL48712.1| RE15630p [Drosophila melanogaster]          33   7.7


>gi|17507397|ref|NP_491648.1| putative nuclear protein (37.9 kD)
           (1G194) [Caenorhabditis elegans]
 gi|13384457|gb|AAK21390.1| Hypothetical protein F46F11.8
           [Caenorhabditis elegans]
          Length = 329

 Score =  623 bits (1606), Expect = e-177
 Identities = 309/329 (93%), Positives = 309/329 (93%)
 Frame = -1

Query: 990 MLSLFFKQKLSIEQDLRLFEKFKNFPQKYESDVEIGEFYSNGTIYFDDARLAQEKVIEMQ 811
           MLSLFFKQKLSIEQDLRLFEKFKNFPQKYESDVEIGEFYSNGTIYFDDARLAQEKVIEMQ
Sbjct: 1   MLSLFFKQKLSIEQDLRLFEKFKNFPQKYESDVEIGEFYSNGTIYFDDARLAQEKVIEMQ 60

Query: 810 QEGFEFLYIIDEPTPILHDDFICLDKEIQDERNYSKCSVQVKIPETPPQNYATTEQFEQF 631
           QEGFEFLYIIDEPTPILHDDFICLDKEIQDERNYSKCSVQVKIPETPPQNYATTEQFEQF
Sbjct: 61  QEGFEFLYIIDEPTPILHDDFICLDKEIQDERNYSKCSVQVKIPETPPQNYATTEQFEQF 120

Query: 630 TKKTIEQFSILAKTMERAIXXXXXXXXXXXXXXXXXXXXSMSAEFTAKNELIANGITCKR 451
           TKKTIEQFSILAKTMERAI                    SMSAEFTAKNELIANGITCKR
Sbjct: 121 TKKTIEQFSILAKTMERAISVPTTPSTPARAAPASVPSTSMSAEFTAKNELIANGITCKR 180

Query: 450 CSKNIRNISPITQLVMAVRDHVMEHFDKENPHLKRFSCRQCTDFKTNFVDDFENHLNRHG 271
           CSKNIRNISPITQLVMAVRDHVMEHFDKENPHLKRFSCRQCTDFKTNFVDDFENHLNRHG
Sbjct: 181 CSKNIRNISPITQLVMAVRDHVMEHFDKENPHLKRFSCRQCTDFKTNFVDDFENHLNRHG 240

Query: 270 SMTSLPEKRQKLTVSLLTETLLKIICKLCNACFPDVFEKSPPAINTILAVTTPQNAKLSV 91
           SMTSLPEKRQKLTVSLLTETLLKIICKLCNACFPDVFEKSPPAINTILAVTTPQNAKLSV
Sbjct: 241 SMTSLPEKRQKLTVSLLTETLLKIICKLCNACFPDVFEKSPPAINTILAVTTPQNAKLSV 300

Query: 90  FPNLDRLYCSRYNIPYRRHSLPPSTIRID 4
           FPNLDRLYCSRYNIPYRRHSLPPSTIRID
Sbjct: 301 FPNLDRLYCSRYNIPYRRHSLPPSTIRID 329




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