Homology by BLASTX


BLASTX 2.2.4 [Aug-26-2002]
Query= F41B4_3
         (405 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|17567611|ref|NP_509150.1| putative cytoplasmic protein (XH454...   227   5e-59
gi|39586755|emb|CAE65797.1| Hypothetical protein CBG10904 [Caeno...   214   2e-55
gi|34908072|ref|NP_915383.1| P0506B12.25 [Oryza sativa (japonica...    32   3.7
gi|50260111|gb|EAL22774.1| hypothetical protein CNBB2220 [Crypto...    31   6.3
gi|50556150|ref|XP_505483.1| hypothetical protein [Yarrowia lipo...    31   6.3
gi|25991428|emb|CAB95446.2| hypothetical protein [Trypanosoma br...    31   6.3
gi|50554925|ref|XP_504871.1| hypothetical protein [Yarrowia lipo...    31   6.3
gi|15801992|ref|NP_288013.1| putative exodeoxyribonuclease encod...    30   8.3


>gi|17567611|ref|NP_509150.1| putative cytoplasmic protein (XH454)
           [Caenorhabditis elegans]
 gi|15150671|gb|AAK85478.1| Hypothetical protein F41B4.3
           [Caenorhabditis elegans]
          Length = 134

 Score =  227 bits (578), Expect = 5e-59
 Identities = 115/134 (85%), Positives = 115/134 (85%)
 Frame = -1

Query: 405 MTDNYLRQVIDHAQNNQRLRGTMSGIFYQTAYXXXXXXXXXXXXXXXXXXXGTMAGAVYG 226
           MTDNYLRQVIDHAQNNQRLRGTMSGIFYQTAY                   GTMAGAVYG
Sbjct: 1   MTDNYLRQVIDHAQNNQRLRGTMSGIFYQTAYAAAGAGAGGLMAGPLGAMFGTMAGAVYG 60

Query: 225 YANSDDYSSVFGIIQNLEDEEKDILTSTIRNHVGGLTFAEFVNWFKDLNHQATFMQLLMA 46
           YANSDDYSSVFGIIQNLEDEEKDILTSTIRNHVGGLTFAEFVNWFKDLNHQATFMQLLMA
Sbjct: 61  YANSDDYSSVFGIIQNLEDEEKDILTSTIRNHVGGLTFAEFVNWFKDLNHQATFMQLLMA 120

Query: 45  YMAANQKSAGTSRR 4
           YMAANQKSAGTSRR
Sbjct: 121 YMAANQKSAGTSRR 134




[DB home][top]