Homology by BLASTX


BLASTX 2.2.4 [Aug-26-2002]
Query= F29B9_1
         (1146 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|17540076|ref|NP_500602.1| putative protein, with at least 5 t...   642   0.0
gi|39587618|emb|CAE58556.1| Hypothetical protein CBG01718 [Caeno...   535   e-151
gi|50260138|gb|EAL22799.1| hypothetical protein CNBB0200 [Crypto...    36   1.5
gi|46107706|ref|XP_380912.1| hypothetical protein FG00736.1 [Gib...    35   2.5
gi|41150991|ref|XP_371164.1| NYD-SP11 protein [Homo sapiens]           35   2.5
gi|47227185|emb|CAG00547.1| unnamed protein product [Tetraodon n...    35   3.3
gi|46135054|ref|ZP_00162315.2| COG0500: SAM-dependent methyltran...    35   3.3
gi|21309834|gb|AAM19759.1| glutamic acid-rich protein cNBL1500 [...    35   3.3
gi|46441058|gb|EAL00358.1| hypothetical protein CaO19.13015 [Can...    28   3.7
gi|49068030|ref|XP_398304.1| hypothetical protein UM00689.1 [Ust...    35   4.3
gi|46397302|sp|Q9Y7N0|YCK2_SCHPO Hypothetical bromodomain protei...    34   5.6
gi|32420169|ref|XP_330528.1| hypothetical protein [Neurospora cr...    34   5.6
gi|17230539|ref|NP_487087.1| unknown protein [Nostoc sp. PCC 712...    34   5.6
gi|33589444|gb|AAQ22489.1| RE11449p [Drosophila melanogaster]          34   5.6
gi|24652859|ref|NP_725094.1| CG8290-PA [Drosophila melanogaster]...    34   7.3
gi|27819803|gb|AAO24950.1| RE53824p [Drosophila melanogaster]          34   7.3
gi|49140192|ref|XP_413601.1| hypothetical protein AN9464.2 [Aspe...    34   7.3
gi|15292081|gb|AAK93309.1| LD37351p [Drosophila melanogaster]          34   7.3
gi|15218492|ref|NP_177388.1| CCAAT-box-binding transcription fac...    33   9.5
gi|39594827|emb|CAE70695.1| Hypothetical protein CBG17418 [Caeno...    33   9.5
gi|34880781|ref|XP_341139.1| similar to KIAA0471 gene product [R...    33   9.5
gi|42407543|dbj|BAD10748.1| putative pepper esterase [Oryza sati...    33   9.5
gi|12083522|gb|AAG48831.1| similar to Arabidopsis thaliana putat...    33   9.5


>gi|17540076|ref|NP_500602.1| putative protein, with at least 5
            transmembrane domains (44.0 kD) (4F413) [Caenorhabditis
            elegans]
 gi|7500141|pir||T29927 hypothetical protein F29B9.8 - Caenorhabditis
            elegans
 gi|9802914|gb|AAF99923.1| Hypothetical protein F29B9.8
            [Caenorhabditis elegans]
          Length = 381

 Score =  642 bits (1655), Expect = 0.0
 Identities = 322/381 (84%), Positives = 322/381 (84%)
 Frame = +1

Query: 1    MSEETLDFSGSMPEEVQTLLTNSEMDPGLLSNEXXXXXXXXXXXXXXXXLAPVLIGYQPN 180
            MSEETLDFSGSMPEEVQTLLTNSEMDPGLLSNE                LAPVLIGYQPN
Sbjct: 1    MSEETLDFSGSMPEEVQTLLTNSEMDPGLLSNETATTMITDVISTTTTTLAPVLIGYQPN 60

Query: 181  PFRIGLLAFKCLLIILIFTLSCTIRKDXXXXXXXXXXXXXXXEAGFDIFTEIHASTAIFG 360
            PFRIGLLAFKCLLIILIFTLSCTIRKD               EAGFDIFTEIHASTAIFG
Sbjct: 61   PFRIGLLAFKCLLIILIFTLSCTIRKDFFKFFVLFLIIPLFIEAGFDIFTEIHASTAIFG 120

Query: 361  AQQFDWQYLNLSPRANDTVTDWQKYAVDGFGEILQKYTTYQVYTKDQLFSIVSYVAGDFI 540
            AQQFDWQYLNLSPRANDTVTDWQKYAVDGFGEILQKYTTYQVYTKDQLFSIVSYVAGDFI
Sbjct: 121  AQQFDWQYLNLSPRANDTVTDWQKYAVDGFGEILQKYTTYQVYTKDQLFSIVSYVAGDFI 180

Query: 541  FWSLLFSTYTVFFFAHKAIARPEQITYEPIGSVFFKAQITPVIFTAFDTLISIYQIPQWA 720
            FWSLLFSTYTVFFFAHKAIARPEQITYEPIGSVFFKAQITPVIFTAFDTLISIYQIPQWA
Sbjct: 181  FWSLLFSTYTVFFFAHKAIARPEQITYEPIGSVFFKAQITPVIFTAFDTLISIYQIPQWA 240

Query: 721  YLSIISSIRLTACIVSFGIVTQMFASLFLFCRRKDEVTKTSPYEHVRNSKXXXXXXXXXS 900
            YLSIISSIRLTACIVSFGIVTQMFASLFLFCRRKDEVTKTSPYEHVRNSK         S
Sbjct: 241  YLSIISSIRLTACIVSFGIVTQMFASLFLFCRRKDEVTKTSPYEHVRNSKLRLFLFLLFS 300

Query: 901  ICVHVLTAPYLIWSGLTIAFDVGQLLGFNWYLPMHFASEMFPLHXXXXXXXXXXXXXXXX 1080
            ICVHVLTAPYLIWSGLTIAFDVGQLLGFNWYLPMHFASEMFPLH
Sbjct: 301  ICVHVLTAPYLIWSGLTIAFDVGQLLGFNWYLPMHFASEMFPLHLTFFLLRPFIFLILAL 360

Query: 1081 XXXNPYRRRFVKFFFPCCRRH 1143
               NPYRRRFVKFFFPCCRRH
Sbjct: 361  ILLNPYRRRFVKFFFPCCRRH 381




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