Homology by BLASTX


BLASTX 2.2.4 [Aug-26-2002]
Query= F20G4_2
         (1431 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|17506705|ref|NP_492184.1| putative nuclear protein, with a co...   840   0.0
gi|39582080|emb|CAE63723.1| Hypothetical protein CBG08248 [Caeno...   382   e-104
gi|6320754|ref|NP_010834.1| Helicase encoded by the Y' element o...    38   0.68
gi|2326849|emb|CAA98020.1| unnamed protein product [Saccharomyce...    38   0.68
gi|6321735|ref|NP_011812.1| Helicase encoded by the Y' element o...    38   0.68
gi|6323990|ref|NP_014060.1| Helicase encoded by the Y' element o...    38   0.68
gi|603431|gb|AAB64717.1| Yer190wp [Saccharomyces cerevisiae]           38   0.68
gi|6321038|ref|NP_011117.1| Helicase encoded by the Y' element o...    38   0.68
gi|6323498|ref|NP_013571.1| Helicase encoded by the Y' element o...    38   0.68
gi|2253194|emb|CAA96275.1| unnamed protein product [Saccharomyce...    38   0.68
gi|9755360|ref|NP_061495.1| Hypothetical ORF; Yor396wp [Saccharo...    38   0.68
gi|283170|pir||S28368 hypothetical protein Y'.2 - yeast (Sacchar...    38   0.68
gi|39595022|emb|CAE70890.1| Hypothetical protein CBG17681 [Caeno...    37   0.89
gi|50878424|gb|AAT85198.1| unknown protein [Oryza sativa (japoni...    37   1.2
gi|27451615|gb|AAO15006.1| hypothetical protein [Takifugu rubripes]    36   2.0
gi|17506241|ref|NP_491870.1| putative prefoldin chaperone (1H71)...    36   2.0
gi|6322237|ref|NP_012311.1| Hypothetical ORF; Yjl225cp [Saccharo...    36   2.6
gi|6322017|ref|NP_012092.1| Hypothetical ORF; Yil177cp [Saccharo...    36   2.6
gi|496936|emb|CAA83985.1| ORF [Saccharomyces cerevisiae]               36   2.6
gi|6320756|ref|NP_010835.1| Hypothetical ORF; Yel077cp [Saccharo...    36   2.6
gi|663232|emb|CAA88141.1| orf [Saccharomyces cerevisiae]               36   2.6
gi|48852422|ref|ZP_00306609.1| COG3473: Maleate cis-trans isomer...    35   4.4
gi|14601266|ref|NP_147801.1| hypothetical protein APE1222 [Aerop...    35   5.8
gi|39596730|emb|CAE63349.1| Hypothetical protein CBG07751 [Caeno...    35   5.8
gi|17551148|ref|NP_509299.1| calponin (44.8 kD) (XI306) [Caenorh...    35   5.8
gi|7497878|pir||T15827 hypothetical protein C53C9.2 - Caenorhabd...    35   5.8


>gi|17506705|ref|NP_492184.1| putative nuclear protein, with a coiled
            coil-4 domain (1I484) [Caenorhabditis elegans]
 gi|7499529|pir||T21173 hypothetical protein F20G4.2 - Caenorhabditis
            elegans
 gi|3876133|emb|CAA99840.1| Hypothetical protein F20G4.2
            [Caenorhabditis elegans]
          Length = 476

 Score =  840 bits (2169), Expect = 0.0
 Identities = 430/476 (90%), Positives = 430/476 (90%)
 Frame = -1

Query: 1431 MKKGGPKLKRKESDEWLCSSTYQPNQEEIVQKNERNSTXXXXXXXLAVVVPRXXXXXXXX 1252
            MKKGGPKLKRKESDEWLCSSTYQPNQEEIVQKNERNST       LAVVVPR
Sbjct: 1    MKKGGPKLKRKESDEWLCSSTYQPNQEEIVQKNERNSTKKKKKLKLAVVVPRKSSNSSIK 60

Query: 1251 XILKQEIDSENVKKLDHRDKYSXXXXXXXXXXXXXILNVVSTSEIKTPTSSMAKIRIITP 1072
             ILKQEIDSENVKKLDHRDKYS             ILNVVSTSEIKTPTSSMAKIRIITP
Sbjct: 61   SILKQEIDSENVKKLDHRDKYSDDEIQIDDGDDVDILNVVSTSEIKTPTSSMAKIRIITP 120

Query: 1071 VIPLKIARHPTKFSPPILQIRQSPEQYFAALTPKRRRSADVVQAVKRRXXXXXXXXXXXX 892
            VIPLKIARHPTKFSPPILQIRQSPEQYFAALTPKRRRSADVVQAVKRR
Sbjct: 121  VIPLKIARHPTKFSPPILQIRQSPEQYFAALTPKRRRSADVVQAVKRRKEDKSDSSDSEQ 180

Query: 891  XXXXXEVSNIFDTFSPIKTIDSPQKTKFSLDFITGYEAQFTAFEDTQPPICFDYCNGKNS 712
                 EVSNIFDTFSPIKTIDSPQKTKFSLDFITGYEAQFTAFEDTQPPICFDYCNGKNS
Sbjct: 181  KSDTSEVSNIFDTFSPIKTIDSPQKTKFSLDFITGYEAQFTAFEDTQPPICFDYCNGKNS 240

Query: 711  PDLFDDVEDPMSIYEESEAFEVANCNLEASPFKIEVSPEKIGSQFRFEEFEEVEKLNVNC 532
            PDLFDDVEDPMSIYEESEAFEVANCNLEASPFKIEVSPEKIGSQFRFEEFEEVEKLNVNC
Sbjct: 241  PDLFDDVEDPMSIYEESEAFEVANCNLEASPFKIEVSPEKIGSQFRFEEFEEVEKLNVNC 300

Query: 531  LKKSPEKKLRFAEPDEPTWDYNNDYQKTEHFIEESCGLHLQNSVFREYAIDIETCGPSVF 352
            LKKSPEKKLRFAEPDEPTWDYNNDYQKTEHFIEESCGLHLQNSVFREYAIDIETCGPSVF
Sbjct: 301  LKKSPEKKLRFAEPDEPTWDYNNDYQKTEHFIEESCGLHLQNSVFREYAIDIETCGPSVF 360

Query: 351  IESTNCAGPDDETQKYKDAESGAMMSNSSFQESQEEDIYDRDELTGLSARFASLMSSKAS 172
            IESTNCAGPDDETQKYKDAESGAMMSNSSFQESQEEDIYDRDELTGLSARFASLMSSKAS
Sbjct: 361  IESTNCAGPDDETQKYKDAESGAMMSNSSFQESQEEDIYDRDELTGLSARFASLMSSKAS 420

Query: 171  ERRLLMSDVVFGTVPKNKLVQLDCTTLQRYVKTKQSSGILFNLKKIVTRPLLEKGA 4
            ERRLLMSDVVFGTVPKNKLVQLDCTTLQRYVKTKQSSGILFNLKKIVTRPLLEKGA
Sbjct: 421  ERRLLMSDVVFGTVPKNKLVQLDCTTLQRYVKTKQSSGILFNLKKIVTRPLLEKGA 476




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