Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= F19B10_11
(807 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|17533351|ref|NP_494614.1| putative nuclear protein (29.6 kD) ... 400 e-110
gi|39581989|emb|CAE73851.1| Hypothetical protein CBG21426 [Caeno... 67 4e-10
gi|6981248|ref|NP_036881.1| nucleolin [Rattus norvegicus] >gnl|B... 35 1.4
gi|92559|pir||JH0148 nucleolin - rat 35 1.4
gi|49071742|ref|XP_400160.1| hypothetical protein UM02545.1 [Ust... 35 1.9
gi|34898162|ref|NP_910427.1| contains ESTs AU100718(C12270),C264... 35 2.5
gi|32474662|ref|NP_867656.1| conserved hypothetical protein [Pir... 35 2.5
gi|34394410|dbj|BAC83508.1| nucleolin-related protein NRP-like [... 35 2.5
gi|23619251|ref|NP_705213.1| hypothetical protein [Plasmodium fa... 34 3.2
gi|12018306|ref|NP_072143.1| nucleolin-related protein [Rattus n... 34 4.2
gi|1174738|sp|P41511|TOP1_USTMA DNA topoisomerase I >gnl|BL_ORD_... 33 5.5
gi|49077792|ref|XP_402716.1| TOP1_USTMA DNA topoisomerase I [Ust... 33 5.5
gi|38109806|gb|EAA55617.1| hypothetical protein MG01268.4 [Magna... 33 5.5
gi|30314655|dbj|BAC76085.1| replication factor C 110 kDa subunit... 33 5.5
gi|21750187|dbj|BAC03738.1| unnamed protein product [Homo sapiens] 33 7.2
gi|47227057|emb|CAG00419.1| unnamed protein product [Tetraodon n... 33 7.2
gi|7452062|pir||T01053 hypothetical protein YUP8H12R.36 - Arabid... 33 7.2
gi|50759888|ref|XP_417830.1| PREDICTED: similar to Transcription... 33 7.2
gi|30699384|ref|NP_178023.2| transcription factor-related [Arabi... 33 7.2
gi|4885511|ref|NP_005372.1| nucleolin [Homo sapiens] >gnl|BL_ORD... 33 7.2
gi|50305507|ref|XP_452713.1| unnamed protein product [Kluyveromy... 33 9.4
gi|27477987|ref|XP_209489.1| similar to CG14853-PB [Homo sapiens] 33 9.4
gi|11878220|gb|AAG40852.1| transcriptional repressor [Xenopus la... 33 9.4
gi|34785484|gb|AAH57697.1| Ctcf protein [Xenopus laevis] 33 9.4
>gi|17533351|ref|NP_494614.1| putative nuclear protein (29.6 kD)
(2D975) [Caenorhabditis elegans]
gi|7499386|pir||T15169 hypothetical protein F19B10.1 -
Caenorhabditis elegans
gi|1947125|gb|AAB52931.1| Hypothetical protein F19B10.1
[Caenorhabditis elegans]
Length = 268
Score = 400 bits (1029), Expect = e-110
Identities = 206/268 (76%), Positives = 206/268 (76%)
Frame = +1
Query: 1 MNPLERKVKQEAEEDGYSSFDEFPAGAIRIPYEELMAKVRXXXXXXXXXQDLVNENSFDQ 180
MNPLERKVKQEAEEDGYSSFDEFPAGAIRIPYEELMAKVR QDLVNENSFDQ
Sbjct: 1 MNPLERKVKQEAEEDGYSSFDEFPAGAIRIPYEELMAKVRAKKAEAEAAQDLVNENSFDQ 60
Query: 181 FXXXXXXXXXXXXXXXXSPSCSPETVAVQKFVTEFMQAAGGSRELRIIKDSQETKIVWKT 360
F SPSCSPETVAVQKFVTEFMQAAGGSRELRIIKDSQETKIVWKT
Sbjct: 61 FVAAPPAPPVQKPAVEPSPSCSPETVAVQKFVTEFMQAAGGSRELRIIKDSQETKIVWKT 120
Query: 361 SPAKPKAXXXXXXXXXXXXXXXXXXXXXXXXXXXRGKRRIVVSSDKDSDGDETPTEDNVN 540
SPAKPKA RGKRRIVVSSDKDSDGDETPTEDNVN
Sbjct: 121 SPAKPKAPPVEDDPTDPTDSQVSTVSSIIPVSSPRGKRRIVVSSDKDSDGDETPTEDNVN 180
Query: 541 NDDQDVTPKKNRKPPVEVVTPSPAKRLRGLNLRXXXXXXXXXXDFQDTQCEDSQDSDYFP 720
NDDQDVTPKKNRKPPVEVVTPSPAKRLRGLNLR DFQDTQCEDSQDSDYFP
Sbjct: 181 NDDQDVTPKKNRKPPVEVVTPSPAKRLRGLNLRSAHSSSDSESDFQDTQCEDSQDSDYFP 240
Query: 721 DTQEQRDRPADFRIPKNAAYDPLDLSYN 804
DTQEQRDRPADFRIPKNAAYDPLDLSYN
Sbjct: 241 DTQEQRDRPADFRIPKNAAYDPLDLSYN 268