Homology by BLASTX


BLASTX 2.2.4 [Aug-26-2002]
Query= E01G4_4
         (393 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|17532751|ref|NP_496834.1| putative nuclear protein (15.2 kD) ...   234   2e-61
gi|39591292|emb|CAE73345.1| Hypothetical protein CBG20777 [Caeno...   191   3e-48
gi|39588538|emb|CAE58061.1| Hypothetical protein CBG01140 [Caeno...    48   4e-05
gi|41055833|ref|NP_956456.1| hypothetical protein MGC55548 [Dani...    34   0.76
gi|15598394|ref|NP_251888.1| conserved hypothetical protein [Pse...    33   1.3
gi|49082256|gb|AAT50528.1| PA3198 [synthetic construct]                33   1.3
gi|38106470|gb|EAA52772.1| hypothetical protein MG05900.4 [Magna...    32   2.2
gi|46164094|ref|ZP_00136542.2| COG1354: Uncharacterized conserve...    32   2.2
gi|9629819|ref|NP_045303.1| circ protein [Bovine herpesvirus 1] ...    32   2.9
gi|17426229|ref|NP_510895.1| similar to phage phi 11 integrase [...    32   3.8
gi|47206479|emb|CAF93258.1| unnamed protein product [Tetraodon n...    32   3.8
gi|34877718|ref|XP_237422.2| similar to PD-1 [Rattus norvegicus]       32   3.8
gi|12328471|dbj|BAB21131.1| P0416D03.19 [Oryza sativa (japonica ...    32   3.8
gi|17553520|ref|NP_498134.1| putative nuclear protein, with a co...    31   4.9
gi|32815742|gb|AAP88255.1| UL74 protein [Human herpesvirus 5]          31   6.5
gi|32490876|ref|NP_871130.1| ubiA [Wigglesworthia glossinidia en...    30   8.4
gi|23954476|gb|AAN40039.1| UL74 protein [Human herpesvirus 5] >g...    30   8.4
gi|50419029|ref|XP_458036.1| unnamed protein product [Debaryomyc...    30   8.4
gi|46441025|gb|EAL00325.1| hypothetical protein CaO19.12982 [Can...    30   8.4
gi|17507467|ref|NP_493503.1| aminopeptidase (1O931) [Caenorhabdi...    30   8.4
gi|18026960|gb|AAL55713.1| putative transcription factor BHLH6 [...    30   8.4
gi|1465368|emb|CAA67885.1| bHLH protein [Arabidopsis thaliana]         30   8.4
gi|25350155|pir||T52293 MYC-related DNA binding protein RD22BP1 ...    30   8.4
gi|15223256|ref|NP_174541.1| basic helix-loop-helix (bHLH) prote...    30   8.4
gi|39595371|emb|CAE60409.1| Hypothetical protein CBG04015 [Caeno...    30   8.4
gi|25144184|ref|NP_740859.1| no mechanoreceptor potential A fami...    30   8.4
gi|22136050|gb|AAM91607.1| unknown protein [Arabidopsis thaliana]      30   8.4
gi|15228492|ref|NP_186971.1| expressed protein [Arabidopsis thal...    30   8.4
gi|32815732|gb|AAP88250.1| truncated UL74 protein [Human herpesv...    30   8.4
gi|25144181|ref|NP_740858.1| no mechanoreceptor potential A fami...    30   8.4


>gi|17532751|ref|NP_496834.1| putative nuclear protein (15.2 kD)
           (2N752) [Caenorhabditis elegans]
 gi|7498282|pir||T20401 hypothetical protein E01G4.3 -
           Caenorhabditis elegans
 gi|3875414|emb|CAB05715.1| Hypothetical protein E01G4.3
           [Caenorhabditis elegans]
          Length = 130

 Score =  234 bits (598), Expect = 2e-61
 Identities = 118/130 (90%), Positives = 118/130 (90%)
 Frame = -1

Query: 393 MLQQSNELSTAFIQLQSRLAAQKMPSTQAKQVLAHALIETLQNWCMQLFWMTVLCVINCC 214
           MLQQSNELSTAFIQLQSRLAAQKMPSTQAKQVLAHALIETLQNWCMQLFWMTVLCVINCC
Sbjct: 1   MLQQSNELSTAFIQLQSRLAAQKMPSTQAKQVLAHALIETLQNWCMQLFWMTVLCVINCC 60

Query: 213 AEEDEKKPKRKHQEHPEFKKRIEDIEQKMLRHLTSPMISGPLRPVRKLXXXXXXXXXXXX 34
           AEEDEKKPKRKHQEHPEFKKRIEDIEQKMLRHLTSPMISGPLRPVRKL
Sbjct: 61  AEEDEKKPKRKHQEHPEFKKRIEDIEQKMLRHLTSPMISGPLRPVRKLSSRRVFSSRPPS 120

Query: 33  PQLFDIAEEE 4
           PQLFDIAEEE
Sbjct: 121 PQLFDIAEEE 130




[DB home][top]