Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= C55B7_2
(1503 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|25145810|ref|NP_491868.2| RNA lariat DeBRanching enzyme (56.7... 1015 0.0
gi|39595702|emb|CAE67205.1| Hypothetical protein CBG12641 [Caeno... 818 0.0
gi|41054477|ref|NP_955947.1| debranching enzyme homolog 1; debra... 337 6e-91
gi|49118792|gb|AAH73223.1| Unknown (protein for MGC:80541) [Xeno... 334 4e-90
gi|14495721|gb|AAH09472.1| Debranching enzyme homolog 1 [Homo sa... 330 4e-89
gi|7705891|ref|NP_057300.1| debranching enzyme homolog 1; RNA la... 330 4e-89
gi|13879368|gb|AAH06661.1| Dbr1 protein [Mus musculus] 328 2e-88
gi|45360549|ref|NP_988947.1| hypothetical protein MGC75873 [Xeno... 328 2e-88
gi|47213193|emb|CAF95984.1| unnamed protein product [Tetraodon n... 327 4e-88
gi|28302193|gb|AAH46698.1| Dbr1-prov protein [Xenopus laevis] 327 4e-88
gi|26355589|dbj|BAC41182.1| unnamed protein product [Mus musculus] 325 1e-87
gi|50399860|ref|NP_113580.2| debranching enzyme homolog 1; debra... 325 1e-87
gi|13324555|gb|AAK18789.1| RNA lariat debranching enzyme [Mus mu... 323 9e-87
gi|50751949|ref|XP_426674.1| PREDICTED: similar to Debranching e... 302 1e-80
gi|24660629|ref|NP_648175.1| CG7942-PA [Drosophila melanogaster]... 300 5e-80
gi|31199989|ref|XP_308942.1| ENSANGP00000013430 [Anopheles gambi... 298 2e-79
gi|18417871|ref|NP_567881.1| calcineurin-like phosphoesterase fa... 285 3e-75
gi|50428730|gb|AAT77081.1| putative Lariat debranching enzyme [O... 283 6e-75
gi|7487937|pir||T05093 lariat-debranching enzyme homolog F28M20.... 278 2e-73
gi|34865951|ref|XP_236600.2| similar to debranching enzyme (S. C... 261 2e-68
gi|49068674|ref|XP_398626.1| hypothetical protein UM01011.1 [Ust... 235 2e-60
gi|50404906|ref|YP_053998.1| Debranching enzyme, putative [Param... 231 4e-59
gi|49090066|ref|XP_406594.1| hypothetical protein AN2457.2 [Aspe... 219 2e-55
gi|46105348|ref|XP_380478.1| hypothetical protein FG00302.1 [Gib... 216 1e-54
gi|23619340|ref|NP_705302.1| RNA lariat debranching enzyme, puta... 215 3e-54
gi|19114382|ref|NP_593470.1| RNA lariat debranching enzyme [Schi... 212 2e-53
gi|6137800|gb|AAC49619.2| RNA lariat debranching enzyme [Schizos... 212 2e-53
gi|38103441|gb|EAA50138.1| hypothetical protein MG03897.4 [Magna... 211 5e-53
gi|32404108|ref|XP_322667.1| hypothetical protein [Neurospora cr... 210 6e-53
gi|23479678|gb|EAA16440.1| RNA lariat debranching enzyme [Plasmo... 206 2e-51
gi|50422209|ref|XP_459667.1| unnamed protein product [Debaryomyc... 202 2e-50
gi|50287081|ref|XP_445970.1| unnamed protein product [Candida gl... 199 1e-49
gi|46228332|gb|EAK89231.1| Dbr1p-like RNA lariat debranching enz... 196 9e-49
gi|6322700|ref|NP_012773.1| RNA lariat debranching enzyme; Dbr1p... 195 2e-48
gi|50257118|gb|EAL19833.1| hypothetical protein CNBG1260 [Crypto... 195 3e-48
gi|46432079|gb|EAK91584.1| hypothetical protein CaO19.11000 [Can... 194 4e-48
gi|45185740|ref|NP_983456.1| ACR053Wp [Eremothecium gossypii] >g... 192 1e-47
gi|50550445|ref|XP_502695.1| hypothetical protein [Yarrowia lipo... 190 7e-47
gi|50306575|ref|XP_453261.1| unnamed protein product [Kluyveromy... 173 9e-42
gi|172555|gb|AAA35025.1| debranching enzyme 120 1e-25
gi|7019994|dbj|BAA90954.1| unnamed protein product [Homo sapiens] 74 9e-12
gi|27503205|gb|AAH42216.1| MGC53307 protein [Xenopus laevis] 68 7e-10
gi|22902461|gb|AAH37640.1| Cwf19l1 protein [Mus musculus] 60 1e-07
gi|38085176|ref|XP_129328.2| RIKEN cDNA 2610528C06 [Mus musculus] 60 1e-07
gi|34863187|ref|XP_345036.1| similar to 2610528C06Rik protein [R... 57 1e-06
gi|7023391|dbj|BAA91947.1| unnamed protein product [Homo sapiens] 56 2e-06
gi|20149652|ref|NP_060764.2| CWF19-like 1, cell cycle control [H... 55 6e-06
gi|49093226|ref|XP_408074.1| hypothetical protein AN3937.2 [Aspe... 50 2e-04
gi|50749246|ref|XP_421550.1| PREDICTED: similar to Inhibitor of ... 49 3e-04
gi|45550410|ref|NP_610670.2| CG7741-PA [Drosophila melanogaster]... 45 0.006
gi|28557585|gb|AAO45198.1| RE73323p [Drosophila melanogaster] 45 0.006
gi|38679132|gb|AAR26387.1| gag protein [Human immunodeficiency v... 37 1.2
gi|30039221|gb|AAP12556.1| nitrate reductase [Penicillium griseo... 37 1.2
gi|27754231|gb|AAO22569.1| unknown protein [Arabidopsis thaliana] 37 1.6
gi|38679141|gb|AAR26395.1| gag protein [Human immunodeficiency v... 37 1.6
gi|1430330|emb|CAB00594.1| gag protein [Human immunodeficiency v... 37 1.6
gi|9651320|gb|AAF91142.1| gag protein [Human immunodeficiency vi... 37 1.6
gi|9886959|gb|AAG01677.1| gag protein [Human immunodeficiency vi... 37 1.6
gi|31199419|ref|XP_308657.1| ENSANGP00000011233 [Anopheles gambi... 37 1.6
gi|1430391|emb|CAB00626.1| gag protein [Human immunodeficiency v... 36 2.1
gi|1430259|emb|CAB00557.1| gag protein [Human immunodeficiency v... 36 2.1
gi|1429802|emb|CAB00320.1| gag protein [Human immunodeficiency v... 36 2.8
gi|1429796|emb|CAB00317.1| gag protein [Human immunodeficiency v... 36 2.8
gi|1430369|emb|CAB00615.1| gag protein [Human immunodeficiency v... 36 2.8
gi|1430355|emb|CAB00607.1| gag protein [Human immunodeficiency v... 36 2.8
gi|1430353|emb|CAB00606.1| gag protein [Human immunodeficiency v... 36 2.8
gi|1430359|emb|CAB00609.1| gag protein [Human immunodeficiency v... 36 2.8
gi|22596328|gb|AAN03109.1| gag protein [Human immunodeficiency v... 35 3.6
gi|1430361|emb|CAB00610.1| gag protein [Human immunodeficiency v... 35 3.6
gi|45520475|ref|ZP_00172005.1| COG3170: Tfp pilus assembly prote... 35 3.6
gi|15789663|ref|NP_279487.1| Vng0417h [Halobacterium sp. NRC-1] ... 35 4.7
gi|554969|gb|AAA44693.1| gag protein 35 4.7
gi|1430399|emb|CAB00630.1| gag protein [Human immunodeficiency v... 35 4.7
gi|1430315|emb|CAB00586.1| gag protein [Human immunodeficiency v... 35 4.7
gi|1430405|emb|CAB00633.1| gag protein [Human immunodeficiency v... 35 4.7
gi|50660233|gb|AAT80841.1| gag protein [Human immunodeficiency v... 35 4.7
gi|554965|gb|AAA44688.1| gag protein 35 6.2
gi|16799796|ref|NP_470064.1| similar to flagellar basal-body M-r... 35 6.2
gi|30263955|ref|NP_846332.1| conserved hypothetical protein [Bac... 35 6.2
gi|1430366|emb|CAB00613.1| gag protein [Human immunodeficiency v... 35 6.2
gi|1429927|emb|CAB00384.1| gag protein [Human immunodeficiency v... 35 6.2
gi|21401940|ref|NP_657925.1| hypothetical protein predicted by G... 35 6.2
gi|25360360|gb|AAN72861.1| gag protein [Human immunodeficiency v... 35 6.2
gi|46121825|ref|XP_385466.1| hypothetical protein FG05290.1 [Gib... 35 6.2
gi|554971|gb|AAA44695.1| gag protein 35 6.2
gi|22596474|gb|AAN03238.1| gag protein [Human immunodeficiency v... 34 8.1
gi|3808271|gb|AAD13358.1| gag protein [Human immunodeficiency vi... 34 8.1
gi|25166811|gb|AAN73601.1| gag-pol fusion polyprotein [Human imm... 34 8.1
gi|22596283|gb|AAN03069.1| gag protein [Human immunodeficiency v... 34 8.1
gi|1429923|emb|CAB00382.1| gag protein [Human immunodeficiency v... 34 8.1
gi|1429968|emb|CAB00405.1| gag protein [Human immunodeficiency v... 34 8.1
gi|1429936|emb|CAB00389.1| gag protein [Human immunodeficiency v... 34 8.1
gi|1894977|gb|AAB49850.1| gag protein [Human immunodeficiency vi... 34 8.1
gi|25360344|gb|AAN72853.1| gag protein [Human immunodeficiency v... 34 8.1
gi|18389619|gb|AAL68716.1| Gag polyprotein [Human immunodeficien... 34 8.1
gi|25360346|gb|AAN72854.1| gag protein [Human immunodeficiency v... 34 8.1
gi|25166812|gb|AAN73602.1| gag polyprotein precursor [Human immu... 34 8.1
>gi|25145810|ref|NP_491868.2| RNA lariat DeBRanching enzyme (56.7 kD)
(dbr-1) [Caenorhabditis elegans]
gi|1794215|gb|AAC47433.1| RNA lariat debranching enzyme
gi|20198799|gb|AAK68279.2| Lariat debranching enzyme related protein
1 [Caenorhabditis elegans]
Length = 500
Score = 1015 bits (2625), Expect = 0.0
Identities = 489/500 (97%), Positives = 489/500 (97%)
Frame = -1
Query: 1503 MSSKNPVDEQPCCGSHEGSHQDPAPETLVVEKEVNNGEKKIRIAVVGCSHGEMDAIYETM 1324
MSSKNPVDEQPCCGSHEGSHQDPAPETLVVEKEVNNGEKKIRIAVVGCSHGEMDAIYETM
Sbjct: 1 MSSKNPVDEQPCCGSHEGSHQDPAPETLVVEKEVNNGEKKIRIAVVGCSHGEMDAIYETM 60
Query: 1323 TLIEQKNGYKFDLLICCGDYQAVRNYGDLPHMSIPPKYRSLQTFYKYYSGEQKAPVLTLF 1144
TLIEQKNGYKFDLLICCGDYQAVRNYGDLPHMSIPPKYRSLQTFYKYYSGEQKAPVLTLF
Sbjct: 61 TLIEQKNGYKFDLLICCGDYQAVRNYGDLPHMSIPPKYRSLQTFYKYYSGEQKAPVLTLF 120
Query: 1143 IGGNHEASGYLCELPNGGWVAPNIYYMGFANCIRFANLRIAGLSGIFSQGDFQFSHYERP 964
IGGNHEASGYLCELPNGGWVAPNIYYMGFANCIRFANLRIAGLSGIFSQGDFQFSHYERP
Sbjct: 121 IGGNHEASGYLCELPNGGWVAPNIYYMGFANCIRFANLRIAGLSGIFSQGDFQFSHYERP 180
Query: 963 SFSERDVKSAYHVRNVDMFRLRQLKSDNENKISNPIDIMLSHDWPGGIPDFGDKEWLFRK 784
SFSERDVKSAYHVRNVDMFRLRQLKSDNENKISNPIDIMLSHDWPGGIPDFGDKEWLFRK
Sbjct: 181 SFSERDVKSAYHVRNVDMFRLRQLKSDNENKISNPIDIMLSHDWPGGIPDFGDKEWLFRK 240
Query: 783 KDLFEADHNSGKLGNPSGMKLIYDCRPRYYXXXXXXXXXXXLVPHKGSGSGRPQPTRFLS 604
KDLFEADHNSGKLGNPSGMKLIYDCRPRYY LVPHKGSGSGRPQPTRFLS
Sbjct: 241 KDLFEADHNSGKLGNPSGMKLIYDCRPRYYLAAHLHIAFAALVPHKGSGSGRPQPTRFLS 300
Query: 603 LDKPIPGRKFMQALELNVADDAKLELSYDPQWLAILRNTDLLTTGTKEQLILPDMASNRP 424
LDKPIPGRKFMQALELNVADDAKLELSYDPQWLAILRNTDLLTTGTKEQLILPDMASNRP
Sbjct: 301 LDKPIPGRKFMQALELNVADDAKLELSYDPQWLAILRNTDLLTTGTKEQLILPDMASNRP 360
Query: 423 CVYERKDFRPTAEELKEIEKLGDLTIRTDSFQQTAPPLKEITESSKNVPPSAYYRNPQSA 244
CVYERKDFRPTAEELKEIEKLGDLTIRTDSFQQTAPPLKEITESSKNVPPSAYYRNPQSA
Sbjct: 361 CVYERKDFRPTAEELKEIEKLGDLTIRTDSFQQTAPPLKEITESSKNVPPSAYYRNPQSA 420
Query: 243 EFCQWLGIRDLNQMLVEKTSEHVGTPYYMMTQDDANAKPNQDDVDFGDEDFVIDRGHTSD 64
EFCQWLGIRDLNQMLVEKTSEHVGTPYYMMTQDDANAKPNQDDVDFGDEDFVIDRGHTSD
Sbjct: 421 EFCQWLGIRDLNQMLVEKTSEHVGTPYYMMTQDDANAKPNQDDVDFGDEDFVIDRGHTSD 480
Query: 63 EPEAKKSRLDEDKFEAVPSE 4
EPEAKKSRLDEDKFEAVPSE
Sbjct: 481 EPEAKKSRLDEDKFEAVPSE 500
>gi|39595702|emb|CAE67205.1| Hypothetical protein CBG12641
[Caenorhabditis briggsae]
Length = 511
Score = 818 bits (2113), Expect = 0.0
Identities = 385/498 (77%), Positives = 438/498 (87%), Gaps = 5/498 (1%)
Frame = -1
Query: 1503 MSSKNPVDEQPCCGSHEGSH----QDPAPETLVVEKEVNNGEKKIRIAVVGCSHGEMDAI 1336
MS++ VDE PCCGSH+ + D AP+ L+VE+EVNNGEKK +IAVVGCSHGEMDAI
Sbjct: 1 MSTEETVDEVPCCGSHDEAQCTIQHDLAPQPLIVEEEVNNGEKKAKIAVVGCSHGEMDAI 60
Query: 1335 YETMTLIEQKNGYKFDLLICCGDYQAVRNYGDLPHMSIPPKYRSLQTFYKYYSGEQKAPV 1156
YETM LIE+K GYKFDLLICCGDYQAVRN+GDLPHMSIPPKYRSLQTFYKYYSGE+KAPV
Sbjct: 61 YETMALIEEKKGYKFDLLICCGDYQAVRNHGDLPHMSIPPKYRSLQTFYKYYSGEKKAPV 120
Query: 1155 LTLFIGGNHEASGYLCELPNGGWVAPNIYYMGFANCIRFANLRIAGLSGIFSQGDFQFSH 976
LTLFIGGNHEASG+LCELPNGGWVAPNI+YMGFANCI+FA LRIAGLSGI+S GD +FSH
Sbjct: 121 LTLFIGGNHEASGFLCELPNGGWVAPNIFYMGFANCIQFAGLRIAGLSGIYSHGDVEFSH 180
Query: 975 YERPSFSERDVKSAYHVRNVDMFRLRQLKSDNENKISNPIDIMLSHDWPGGIPDFGDKEW 796
YERP+F+ERDVKSAYHVRNVDMFRLRQLK+ N +K+SNPIDIMLSHDWPGGIPDFGD W
Sbjct: 181 YERPAFAERDVKSAYHVRNVDMFRLRQLKAANNDKLSNPIDIMLSHDWPGGIPDFGDSAW 240
Query: 795 LFRKKDLFEADHNSGKLGNPSGMKLIYDCRPRYYXXXXXXXXXXXLVPHKGSGSGRPQPT 616
LF+KKDLFEADH SGKLGNP+ MKLIYDCRPRYY LVPHKGSGS RPQPT
Sbjct: 241 LFKKKDLFEADHKSGKLGNPALMKLIYDCRPRYYLAAHLHIKFAALVPHKGSGSERPQPT 300
Query: 615 RFLSLDKPIPGRKFMQALELNVADDAKLELSYDPQWLAILRNTDLLTTGTKEQLILPDMA 436
RFLSLDKPIPGR+FMQALE+NVA DAK+ELSYDP+WLAIL+NTDLLTT K +++LPD
Sbjct: 301 RFLSLDKPIPGRQFMQALEINVASDAKMELSYDPEWLAILKNTDLLTTADKTKIVLPDRI 360
Query: 435 SNRPCVYERKDFRPTAEELKEIEKLGDLTIRTDSFQQTAPPLKEITESSKNVPPSAYYRN 256
+ PCVY+RKDFRPTAEE++EI KLGDLTI+TD+F+ TAPPLKE T +KNVPPSAYYRN
Sbjct: 361 GSVPCVYDRKDFRPTAEEMEEITKLGDLTIKTDTFKHTAPPLKEDTSEAKNVPPSAYYRN 420
Query: 255 PQSAEFCQWLGIRDLNQMLVEKTSEHVGTPYYMMTQD-DANAKPNQDDVDFGDEDFVIDR 79
PQSAEFCQWLGI+DLN +LVEK+S++VG P+YMM + K NQD+VDFG++DF+IDR
Sbjct: 421 PQSAEFCQWLGIKDLNYLLVEKSSDYVGIPFYMMPDSGETEFKSNQDEVDFGEDDFIIDR 480
Query: 78 GHTSDEPEAKKSRLDEDK 25
GH S+EPEAKKSRL+E+K
Sbjct: 481 GHGSEEPEAKKSRLEEEK 498