Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= C49H3_6
(1848 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|25149830|ref|NP_741454.1| transcription complex (4I679) [Caen... 896 0.0
gi|25149826|ref|NP_741453.1| transcription complex (90.2 kD) (4I... 891 0.0
gi|7497693|pir||T34180 hypothetical protein C49H3.5 - Caenorhabd... 885 0.0
gi|39595039|emb|CAE70907.1| Hypothetical protein CBG17704 [Caeno... 604 e-171
gi|34855140|ref|XP_231603.2| similar to potential transcriptiona... 102 3e-20
gi|46395844|sp|Q8BT14|CNO4_MOUSE CCR4-NOT transcription complex ... 101 5e-20
gi|31560446|ref|NP_058573.2| CCR4-NOT transcription complex, sub... 101 5e-20
gi|37590150|gb|AAH58778.1| Cnot4 protein [Mus musculus] 101 7e-20
gi|26389853|dbj|BAC25801.1| unnamed protein product [Mus musculus] 100 2e-19
gi|46395635|sp|O95628|CNO4_HUMAN CCR4-NOT transcription complex ... 99 3e-19
gi|9367873|emb|CAB97536.1| NOT4, potential transcriptional repre... 99 3e-19
gi|31248070|ref|XP_318937.1| ENSANGP00000023436 [Anopheles gambi... 98 6e-19
gi|23272569|gb|AAH35590.1| CNOT4 protein [Homo sapiens] 98 6e-19
gi|50728558|ref|XP_416177.1| PREDICTED: similar to Cnot4 protein... 97 2e-18
gi|6856207|gb|AAF29829.1| Not4-Np [Homo sapiens] 95 5e-18
gi|24583396|ref|NP_723578.1| CG31716-PA [Drosophila melanogaster... 94 8e-18
gi|24583406|ref|NP_723583.1| CG31716-PG [Drosophila melanogaster... 94 1e-17
gi|48101919|ref|XP_392724.1| similar to CG31716-PG [Apis mellifera] 93 2e-17
gi|47224425|emb|CAG08675.1| unnamed protein product [Tetraodon n... 91 7e-17
gi|41054904|ref|NP_957463.1| similar to CCR4-NOT transcription c... 90 2e-16
gi|7019467|ref|NP_037448.1| CCR4-NOT transcription complex, subu... 88 6e-16
gi|4097900|gb|AAD00180.1| potential transcriptional repressor NO... 88 6e-16
gi|28278582|gb|AAH44088.1| Cnot4-prov protein [Xenopus laevis] 88 8e-16
gi|31233716|ref|XP_318936.1| ENSANGP00000015688 [Anopheles gambi... 72 6e-11
gi|23509035|ref|NP_701703.1| hypothetical protein [Plasmodium fa... 71 1e-10
gi|23479809|gb|EAA16539.1| putative protein potential transcript... 68 9e-10
gi|22760262|dbj|BAC11125.1| unnamed protein product [Homo sapiens] 67 2e-09
gi|19113990|ref|NP_593078.1| putative transcriptional repressor ... 64 9e-09
gi|49072044|ref|XP_400311.1| hypothetical protein UM02696.1 [Ust... 64 1e-08
gi|6320912|ref|NP_010991.1| Component of the CCR4-NOT transcript... 64 2e-08
gi|28828505|gb|AAO51113.1| similar to Dictyostelium discoideum (... 62 5e-08
gi|15238634|ref|NP_200825.1| RNA recognition motif (RRM)-contain... 61 1e-07
gi|8885568|dbj|BAA97498.1| general negative transcription regula... 61 1e-07
gi|45187809|ref|NP_984032.1| ADL064Wp [Eremothecium gossypii] >g... 60 1e-07
gi|50554963|ref|XP_504890.1| hypothetical protein [Yarrowia lipo... 60 2e-07
gi|46434693|gb|EAK94095.1| hypothetical protein CaO19.2379 [Cand... 59 4e-07
gi|28373260|gb|AAF66693.2| NOT4p [Candida albicans] 59 4e-07
gi|46434745|gb|EAK94146.1| hypothetical protein CaO19.9915 [Cand... 59 4e-07
gi|50425277|ref|XP_461230.1| unnamed protein product [Debaryomyc... 59 5e-07
gi|15231193|ref|NP_190149.1| RNA recognition motif (RRM)-contain... 58 7e-07
gi|49087976|ref|XP_405864.1| hypothetical protein AN1727.2 [Aspe... 57 1e-06
gi|38109877|gb|EAA55681.1| hypothetical protein MG01332.4 [Magna... 57 1e-06
gi|19074966|ref|NP_586472.1| RING ZINC FINGER TRANSCRIPTION NEGA... 57 2e-06
gi|50305199|ref|XP_452558.1| unnamed protein product [Kluyveromy... 57 2e-06
gi|24741192|emb|CAD56154.1| CCr4/NOT complex/transcription facto... 57 2e-06
gi|50290813|ref|XP_447839.1| unnamed protein product [Candida gl... 56 3e-06
gi|46134187|ref|XP_389409.1| hypothetical protein FG09233.1 [Gib... 56 3e-06
gi|50259942|gb|EAL22608.1| hypothetical protein CNBB2400 [Crypto... 55 6e-06
gi|15226889|ref|NP_180420.1| RNA recognition motif (RRM)-contain... 55 7e-06
gi|29249961|gb|EAA41463.1| GLP_422_72387_71359 [Giardia lamblia ... 54 1e-05
gi|34903838|ref|NP_913266.1| unnamed protein product [Oryza sati... 54 2e-05
gi|32405558|ref|XP_323392.1| hypothetical protein [Neurospora cr... 51 1e-04
gi|31233724|ref|XP_318938.1| ENSANGP00000015051 [Anopheles gambi... 46 0.003
gi|48120559|ref|XP_393227.1| similar to CG5580-PA [Apis mellifera] 46 0.003
gi|46229641|gb|EAK90459.1| Not4hp/Mot2p, RING finger+RRM domains... 44 0.013
gi|49083936|ref|XP_404208.1| hypothetical protein AN0071.2 [Aspe... 38 0.94
gi|46431336|gb|EAK90918.1| hypothetical protein CaO19.1133 [Cand... 37 1.2
gi|23612609|ref|NP_704170.1| hypothetical protein [Plasmodium fa... 37 1.2
gi|46431330|gb|EAK90913.1| hypothetical protein CaO19.8726 [Cand... 37 1.2
gi|33945117|ref|XP_340706.1| hypothetical protein Tb927.2.6080 [... 37 2.1
gi|30681347|ref|NP_850554.1| no apical meristem (NAM) family pro... 36 3.6
gi|12620209|gb|AAG60619.1| adenylate cyclase [Cryptococcus neofo... 35 4.7
gi|23509871|ref|NP_702538.1| hypothetical protein [Plasmodium fa... 35 6.1
gi|7661690|ref|NP_056418.1| coiled-coil domain containing 9 [Hom... 35 6.1
gi|38099361|gb|EAA46718.1| hypothetical protein MG09939.4 [Magna... 35 8.0
gi|48833346|ref|ZP_00290366.1| hypothetical protein Mmc102001066... 35 8.0
gi|4033378|sp|P87090|CPC1_CRYPA CROSS-PATHWAY CONTROL PROTEIN 1 ... 35 8.0
gi|50355740|gb|AAT75265.1| putative cell wall protein [Oryza sat... 35 8.0
gi|23104502|ref|ZP_00090966.1| hypothetical protein [Azotobacter... 35 8.0
>gi|25149830|ref|NP_741454.1| transcription complex (4I679)
[Caenorhabditis elegans]
gi|20198797|gb|AAM15564.1| Not-like (yeast ccr4/not complex
component) protein 4, isoform b [Caenorhabditis elegans]
Length = 615
Score = 896 bits (2316), Expect = 0.0
Identities = 461/615 (74%), Positives = 461/615 (74%)
Frame = +1
Query: 1 MLDGRLVKASLGTTKYCSSFLNSRKCFKPECMYLHENAEAEISFTKDDMHLGKHTEYEKR 180
MLDGRLVKASLGTTKYCSSFLNSRKCFKPECMYLHENAEAEISFTKDDMHLGKHTEYEKR
Sbjct: 1 MLDGRLVKASLGTTKYCSSFLNSRKCFKPECMYLHENAEAEISFTKDDMHLGKHTEYEKR 60
Query: 181 LIESMNSRPPPPQSTLASQLDKILAPTSNSPRRYLEDDSDTVDDVERTGSAIHMCXXXXX 360
LIESMNSRPPPPQSTLASQLDKILAPTSNSPRRYLEDDSDTVDDVERTGSAIHMC
Sbjct: 61 LIESMNSRPPPPQSTLASQLDKILAPTSNSPRRYLEDDSDTVDDVERTGSAIHMCADDPD 120
Query: 361 XXXXXXXXXXXXXXXXAPSNPADETVNSRRSNQTARERQWSERDEISVAPSNTPPTDPEG 540
APSNPADETVNSRRSNQTARERQWSERDEISVAPSNTPPTDPEG
Sbjct: 121 DDDADSTNTSNSIDDPAPSNPADETVNSRRSNQTARERQWSERDEISVAPSNTPPTDPEG 180
Query: 541 NENEFEEDIHRNDVSDLMSKLDVNDDRLARTSFSENDYLGIPAPAKHQEAPAPLMQWEAL 720
NENEFEEDIHRNDVSDLMSKLDVNDDRLARTSFSENDYLGIPAPAKHQEAPAPLMQWEAL
Sbjct: 181 NENEFEEDIHRNDVSDLMSKLDVNDDRLARTSFSENDYLGIPAPAKHQEAPAPLMQWEAL 240
Query: 721 LGLSSPSAQSTIVEPSSLFPTFKMDSGFNSQSLFGTHTSSTPSFRREASPPPGLARFNSD 900
LGLSSPSAQSTIVEPSSLFPTFKMDSGFNSQSLFGTHTSSTPSFRREASPPPGLARFNSD
Sbjct: 241 LGLSSPSAQSTIVEPSSLFPTFKMDSGFNSQSLFGTHTSSTPSFRREASPPPGLARFNSD 300
Query: 901 DDLGFDPFTESSKGLSALLQEEQEQIPPHNSASNHTLDVLKQLFGQLPEXXXXXXXXXXX 1080
DDLGFDPFTESSKGLSALLQEEQEQIPPHNSASNHTLDVLKQLFGQLPE
Sbjct: 301 DDLGFDPFTESSKGLSALLQEEQEQIPPHNSASNHTLDVLKQLFGQLPEQRQSTQQHPQH 360
Query: 1081 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADMNRQQDYMYSRLMXXXXXXXXX 1260
ADMNRQQDYMYSRLM
Sbjct: 361 LQSSHQQHPLQQNQDQHHSFLHQLHAQQQHQQQQFAADMNRQQDYMYSRLMSQQQQQSQQ 420
Query: 1261 XXXFDSTPGFSHPFGSMXXXXXXXXXXXXXXXXXXXXXXXXDLFNRXXXXXXXXXXXXXX 1440
FDSTPGFSHPFGSM DLFNR
Sbjct: 421 QRQFDSTPGFSHPFGSMQQQQQSSQQQQHQSQSSQSSSLLQDLFNRQQQQHQAQQQAQQH 480
Query: 1441 XXXXMYAGINSYMYNDMLMPRVPFGMAPPPGLGGPSTNRSSTTQQAPPHMTXXXXXXXXX 1620
MYAGINSYMYNDMLMPRVPFGMAPPPGLGGPSTNRSSTTQQAPPHMT
Sbjct: 481 QQQQMYAGINSYMYNDMLMPRVPFGMAPPPGLGGPSTNRSSTTQQAPPHMTQQSQQQQQQ 540
Query: 1621 XXXXMGLFGMGGXXXXXXXXXXXXXXXXXXXFKALLPNVNVRFMDDNSMSRWSHENSLRS 1800
MGLFGMGG FKALLPNVNVRFMDDNSMSRWSHENSLRS
Sbjct: 541 QQSSMGLFGMGGHQSMMQDHQSQQPQSAQDAFKALLPNVNVRFMDDNSMSRWSHENSLRS 600
Query: 1801 SAVPPPPGFSSVMNR 1845
SAVPPPPGFSSVMNR
Sbjct: 601 SAVPPPPGFSSVMNR 615
>gi|25149826|ref|NP_741453.1| transcription complex (90.2 kD) (4I679)
[Caenorhabditis elegans]
gi|14573964|gb|AAF99894.2| Not-like (yeast ccr4/not complex
component) protein 4, isoform a [Caenorhabditis elegans]
Length = 796
Score = 891 bits (2303), Expect = 0.0
Identities = 461/617 (74%), Positives = 461/617 (74%), Gaps = 2/617 (0%)
Frame = +1
Query: 1 MLDGRLVKASLGTTKYCSSFLNSRKCFKP--ECMYLHENAEAEISFTKDDMHLGKHTEYE 174
MLDGRLVKASLGTTKYCSSFLNSRKCFKP ECMYLHENAEAEISFTKDDMHLGKHTEYE
Sbjct: 180 MLDGRLVKASLGTTKYCSSFLNSRKCFKPVGECMYLHENAEAEISFTKDDMHLGKHTEYE 239
Query: 175 KRLIESMNSRPPPPQSTLASQLDKILAPTSNSPRRYLEDDSDTVDDVERTGSAIHMCXXX 354
KRLIESMNSRPPPPQSTLASQLDKILAPTSNSPRRYLEDDSDTVDDVERTGSAIHMC
Sbjct: 240 KRLIESMNSRPPPPQSTLASQLDKILAPTSNSPRRYLEDDSDTVDDVERTGSAIHMCADD 299
Query: 355 XXXXXXXXXXXXXXXXXXAPSNPADETVNSRRSNQTARERQWSERDEISVAPSNTPPTDP 534
APSNPADETVNSRRSNQTARERQWSERDEISVAPSNTPPTDP
Sbjct: 300 PDDDDADSTNTSNSIDDPAPSNPADETVNSRRSNQTARERQWSERDEISVAPSNTPPTDP 359
Query: 535 EGNENEFEEDIHRNDVSDLMSKLDVNDDRLARTSFSENDYLGIPAPAKHQEAPAPLMQWE 714
EGNENEFEEDIHRNDVSDLMSKLDVNDDRLARTSFSENDYLGIPAPAKHQEAPAPLMQWE
Sbjct: 360 EGNENEFEEDIHRNDVSDLMSKLDVNDDRLARTSFSENDYLGIPAPAKHQEAPAPLMQWE 419
Query: 715 ALLGLSSPSAQSTIVEPSSLFPTFKMDSGFNSQSLFGTHTSSTPSFRREASPPPGLARFN 894
ALLGLSSPSAQSTIVEPSSLFPTFKMDSGFNSQSLFGTHTSSTPSFRREASPPPGLARFN
Sbjct: 420 ALLGLSSPSAQSTIVEPSSLFPTFKMDSGFNSQSLFGTHTSSTPSFRREASPPPGLARFN 479
Query: 895 SDDDLGFDPFTESSKGLSALLQEEQEQIPPHNSASNHTLDVLKQLFGQLPEXXXXXXXXX 1074
SDDDLGFDPFTESSKGLSALLQEEQEQIPPHNSASNHTLDVLKQLFGQLPE
Sbjct: 480 SDDDLGFDPFTESSKGLSALLQEEQEQIPPHNSASNHTLDVLKQLFGQLPEQRQSTQQHP 539
Query: 1075 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADMNRQQDYMYSRLMXXXXXXX 1254
ADMNRQQDYMYSRLM
Sbjct: 540 QHLQSSHQQHPLQQNQDQHHSFLHQLHAQQQHQQQQFAADMNRQQDYMYSRLMSQQQQQS 599
Query: 1255 XXXXXFDSTPGFSHPFGSMXXXXXXXXXXXXXXXXXXXXXXXXDLFNRXXXXXXXXXXXX 1434
FDSTPGFSHPFGSM DLFNR
Sbjct: 600 QQQRQFDSTPGFSHPFGSMQQQQQSSQQQQHQSQSSQSSSLLQDLFNRQQQQHQAQQQAQ 659
Query: 1435 XXXXXXMYAGINSYMYNDMLMPRVPFGMAPPPGLGGPSTNRSSTTQQAPPHMTXXXXXXX 1614
MYAGINSYMYNDMLMPRVPFGMAPPPGLGGPSTNRSSTTQQAPPHMT
Sbjct: 660 QHQQQQMYAGINSYMYNDMLMPRVPFGMAPPPGLGGPSTNRSSTTQQAPPHMTQQSQQQQ 719
Query: 1615 XXXXXXMGLFGMGGXXXXXXXXXXXXXXXXXXXFKALLPNVNVRFMDDNSMSRWSHENSL 1794
MGLFGMGG FKALLPNVNVRFMDDNSMSRWSHENSL
Sbjct: 720 QQQQSSMGLFGMGGHQSMMQDHQSQQPQSAQDAFKALLPNVNVRFMDDNSMSRWSHENSL 779
Query: 1795 RSSAVPPPPGFSSVMNR 1845
RSSAVPPPPGFSSVMNR
Sbjct: 780 RSSAVPPPPGFSSVMNR 796
>gi|7497693|pir||T34180 hypothetical protein C49H3.5 - Caenorhabditis
elegans
Length = 812
Score = 885 bits (2287), Expect = 0.0
Identities = 461/633 (72%), Positives = 461/633 (72%), Gaps = 18/633 (2%)
Frame = +1
Query: 1 MLDGRLVKASLGTTKYCSSFLNSRKCFKPECMYLHENAEAEISFTKDDMHLGKHTEYEKR 180
MLDGRLVKASLGTTKYCSSFLNSRKCFKPECMYLHENAEAEISFTKDDMHLGKHTEYEKR
Sbjct: 180 MLDGRLVKASLGTTKYCSSFLNSRKCFKPECMYLHENAEAEISFTKDDMHLGKHTEYEKR 239
Query: 181 LIESMNSRPPPPQSTLASQLDKILAPTSNSPRRYLEDDSDTVDDVERTGSAIHMCXXXXX 360
LIESMNSRPPPPQSTLASQLDKILAPTSNSPRRYLEDDSDTVDDVERTGSAIHMC
Sbjct: 240 LIESMNSRPPPPQSTLASQLDKILAPTSNSPRRYLEDDSDTVDDVERTGSAIHMCADDPD 299
Query: 361 XXXXXXXXXXXXXXXXAPSNPADETVNSRRSNQTARERQWSERDEISVAPSNTPPTDPEG 540
APSNPADETVNSRRSNQTARERQWSERDEISVAPSNTPPTDPEG
Sbjct: 300 DDDADSTNTSNSIDDPAPSNPADETVNSRRSNQTARERQWSERDEISVAPSNTPPTDPEG 359
Query: 541 NENEFEEDIHR------------------NDVSDLMSKLDVNDDRLARTSFSENDYLGIP 666
NENEFEEDIHR NDVSDLMSKLDVNDDRLARTSFSENDYLGIP
Sbjct: 360 NENEFEEDIHRYQFSEISFIYQQKIELFRNDVSDLMSKLDVNDDRLARTSFSENDYLGIP 419
Query: 667 APAKHQEAPAPLMQWEALLGLSSPSAQSTIVEPSSLFPTFKMDSGFNSQSLFGTHTSSTP 846
APAKHQEAPAPLMQWEALLGLSSPSAQSTIVEPSSLFPTFKMDSGFNSQSLFGTHTSSTP
Sbjct: 420 APAKHQEAPAPLMQWEALLGLSSPSAQSTIVEPSSLFPTFKMDSGFNSQSLFGTHTSSTP 479
Query: 847 SFRREASPPPGLARFNSDDDLGFDPFTESSKGLSALLQEEQEQIPPHNSASNHTLDVLKQ 1026
SFRREASPPPGLARFNSDDDLGFDPFTESSKGLSALLQEEQEQIPPHNSASNHTLDVLKQ
Sbjct: 480 SFRREASPPPGLARFNSDDDLGFDPFTESSKGLSALLQEEQEQIPPHNSASNHTLDVLKQ 539
Query: 1027 LFGQLPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADMNRQ 1206
LFGQLPE ADMNRQ
Sbjct: 540 LFGQLPEQRQSTQQHPQHLQSSHQQHPLQQNQDQHHSFLHQLHAQQQHQQQQFAADMNRQ 599
Query: 1207 QDYMYSRLMXXXXXXXXXXXXFDSTPGFSHPFGSMXXXXXXXXXXXXXXXXXXXXXXXXD 1386
QDYMYSRLM FDSTPGFSHPFGSM D
Sbjct: 600 QDYMYSRLMSQQQQQSQQQRQFDSTPGFSHPFGSMQQQQQSSQQQQHQSQSSQSSSLLQD 659
Query: 1387 LFNRXXXXXXXXXXXXXXXXXXMYAGINSYMYNDMLMPRVPFGMAPPPGLGGPSTNRSST 1566
LFNR MYAGINSYMYNDMLMPRVPFGMAPPPGLGGPSTNRSST
Sbjct: 660 LFNRQQQQHQAQQQAQQHQQQQMYAGINSYMYNDMLMPRVPFGMAPPPGLGGPSTNRSST 719
Query: 1567 TQQAPPHMTXXXXXXXXXXXXXMGLFGMGGXXXXXXXXXXXXXXXXXXXFKALLPNVNVR 1746
TQQAPPHMT MGLFGMGG FKALLPNVNVR
Sbjct: 720 TQQAPPHMTQQSQQQQQQQQSSMGLFGMGGHQSMMQDHQSQQPQSAQDAFKALLPNVNVR 779
Query: 1747 FMDDNSMSRWSHENSLRSSAVPPPPGFSSVMNR 1845
FMDDNSMSRWSHENSLRSSAVPPPPGFSSVMNR
Sbjct: 780 FMDDNSMSRWSHENSLRSSAVPPPPGFSSVMNR 812