Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= C47F8_8
(846 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|17506087|ref|NP_493120.1| cyclin-like F-box (1M929) [Caenorha... 526 e-148
gi|17507171|ref|NP_492986.1| cyclin-like F-box family member (1M... 67 6e-10
gi|17533223|ref|NP_496654.1| cyclin-like F-box family member (2M... 47 4e-04
gi|39595167|emb|CAE60204.1| Hypothetical protein CBG03766 [Caeno... 46 0.001
gi|7507212|pir||T24545 hypothetical protein T05F1.11 - Caenorhab... 45 0.002
gi|32565425|ref|NP_871891.1| cyclin-like F-box family member (1K... 44 0.004
gi|17533665|ref|NP_494331.1| cyclin-like F-box (2C970) [Caenorha... 40 0.049
gi|17556282|ref|NP_499546.1| cyclin-like F-box family member (3M... 40 0.063
gi|7510650|pir||T25956 hypothetical protein ZC204.7 - Caenorhabd... 40 0.083
gi|17537755|ref|NP_494026.1| cyclin-like F-box family member (2B... 40 0.083
gi|17534523|ref|NP_494048.1| cyclin-like F-box family member (2B... 39 0.11
gi|17556284|ref|NP_499547.1| predicted CDS, cyclin-like F-box fa... 39 0.11
gi|39580965|emb|CAE72935.1| Hypothetical protein CBG20260 [Caeno... 38 0.24
gi|7500438|pir||T32345 hypothetical protein F34D6.1 - Caenorhabd... 38 0.31
gi|24584459|ref|NP_609762.2| CG4587-PA [Drosophila melanogaster]... 37 0.70
gi|7287919|gb|AAF44957.1| hypothetical protein [Drosophila melan... 37 0.70
gi|17553112|ref|NP_498432.1| cyclin-like F-box family member (3H... 35 1.6
gi|22218294|gb|AAM94620.1| VP2 [Bluetongue virus] 35 2.0
gi|17541606|ref|NP_502237.1| cyclin-like F-box family member (4M... 35 2.0
gi|46122087|ref|XP_385597.1| hypothetical protein FG05421.1 [Gib... 34 4.5
gi|7506054|pir||T32302 hypothetical protein M151.6 - Caenorhabdi... 33 5.9
gi|17534505|ref|NP_494036.1| cyclin-like F-box family member (2B... 33 5.9
gi|17567313|ref|NP_510404.1| cyclin-like F-box (XP63) [Caenorhab... 33 7.8
gi|39587416|emb|CAE75070.1| Hypothetical protein CBG22986 [Caeno... 33 7.8
gi|17564566|ref|NP_506441.1| cyclin-like F-box family member (5O... 33 7.8
gi|7508239|pir||T25124 hypothetical protein T22G5.3 - Caenorhabd... 33 7.8
gi|30021539|ref|NP_833170.1| Daunorubicin resistance ATP-binding... 33 7.8
gi|17534927|ref|NP_493999.1| cyclin-like F-box family member (2B... 33 7.8
gi|31213097|ref|XP_315492.1| ENSANGP00000024165 [Anopheles gambi... 33 7.8
gi|31213095|ref|XP_315491.1| ENSANGP00000021218 [Anopheles gambi... 33 7.8
gi|7505335|pir||T32848 hypothetical protein K05F6.7 - Caenorhabd... 33 7.8
gi|17536783|ref|NP_493764.1| predicted CDS, cyclin-like F-box fa... 33 7.8
gi|48831770|ref|ZP_00288823.1| COG0840: Methyl-accepting chemota... 33 7.8
gi|17534923|ref|NP_493995.1| cyclin-like F-box family member (2B... 33 7.8
gi|13517548|gb|AAK28843.1| DNA polymerase [bovine lymphotropic h... 33 7.8
gi|30698937|ref|NP_177485.2| sec34-like family protein [Arabidop... 33 7.8
gi|22654989|gb|AAM98086.1| At1g73430/T9L24_16 [Arabidopsis thali... 33 7.8
>gi|17506087|ref|NP_493120.1| cyclin-like F-box (1M929)
[Caenorhabditis elegans]
gi|7497581|pir||T20025 hypothetical protein C47F8.1 -
Caenorhabditis elegans
gi|3875097|emb|CAA15835.1| Hypothetical protein C47F8.1
[Caenorhabditis elegans]
Length = 281
Score = 526 bits (1354), Expect = e-148
Identities = 262/281 (93%), Positives = 262/281 (93%)
Frame = +1
Query: 1 MSSFQLQQLPSLPIKEVFKSLGVCDLLNLCRSSNKSRRLVKKSLKDITFTLKIVAEEKHY 180
MSSFQLQQLPSLPIKEVFKSLGVCDLLNLCRSSNKSRRLVKKSLKDITFTLKIVAEEKHY
Sbjct: 1 MSSFQLQQLPSLPIKEVFKSLGVCDLLNLCRSSNKSRRLVKKSLKDITFTLKIVAEEKHY 60
Query: 181 KIWLKEDFSKHKARIRAENSNGTSLFKNIRWLMHTFWVETVYLDCTNVEEGDXXXXXXXX 360
KIWLKEDFSKHKARIRAENSNGTSLFKNIRWLMHTFWVETVYLDCTNVEEGD
Sbjct: 61 KIWLKEDFSKHKARIRAENSNGTSLFKNIRWLMHTFWVETVYLDCTNVEEGDVVKVVEYL 120
Query: 361 XXXXXXXXXXXFECPMISDSLWQLMLNCEADVLIISVDREVKVTFDNVPLLFNCECIILH 540
FECPMISDSLWQLMLNCEADVLIISVDREVKVTFDNVPLLFNCECIILH
Sbjct: 121 KKEKPYYLKLYFECPMISDSLWQLMLNCEADVLIISVDREVKVTFDNVPLLFNCECIILH 180
Query: 541 GVKFSEKGMNLLFKTWQSSKERTLQCVSLTRKLGPFWKKQANEKVVLKGIDVESVEKKRI 720
GVKFSEKGMNLLFKTWQSSKERTLQCVSLTRKLGPFWKKQANEKVVLKGIDVESVEKKRI
Sbjct: 181 GVKFSEKGMNLLFKTWQSSKERTLQCVSLTRKLGPFWKKQANEKVVLKGIDVESVEKKRI 240
Query: 721 FKVKKDGIKKSTTYNLVKNDGELATLKFDKQEICFHTENDR 843
FKVKKDGIKKSTTYNLVKNDGELATLKFDKQEICFHTENDR
Sbjct: 241 FKVKKDGIKKSTTYNLVKNDGELATLKFDKQEICFHTENDR 281