Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= C32E8_7
(624 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|17505793|ref|NP_491220.1| ribosomal protein L13, Ribosomal Pr... 372 e-102
gi|39586254|emb|CAE66665.1| Hypothetical protein CBG12003 [Caeno... 360 1e-98
gi|21759387|sp|Q90YV5|RL13_ICTPU 60S ribosomal protein L13 >gnl|... 226 3e-58
gi|45360871|ref|NP_989111.1| ribosomal protein L13 [Xenopus trop... 224 8e-58
gi|47230422|emb|CAF99615.1| unnamed protein product [Tetraodon n... 224 1e-57
gi|27370913|gb|AAH41531.1| Similar to ribosomal protein L13 [Xen... 223 2e-57
gi|49670412|gb|AAH75140.1| Unknown (protein for MGC:81947) [Xeno... 223 2e-57
gi|730529|sp|P41123|RL13_RAT 60S ribosomal protein L13 >gnl|BL_O... 223 3e-57
gi|12846804|dbj|BAB27309.1| unnamed protein product [Mus musculus] 221 7e-57
gi|33186863|ref|NP_058018.2| ribosomal protein L13 [Mus musculus... 221 7e-57
gi|37700241|ref|NP_937786.1| ribosomal protein L13 [Danio rerio]... 221 7e-57
gi|15431295|ref|NP_150254.1| ribosomal protein L13; 60S ribosoma... 221 9e-57
gi|45384528|ref|NP_990330.1| ribosomal protein L13; breast basic... 220 1e-56
gi|13592055|ref|NP_112363.1| ribosomal protein L13 [Rattus norve... 220 1e-56
gi|542770|pir||S23753 ribosomal protein L13, cytosolic - human >... 219 3e-56
gi|899445|gb|AAA69923.1| 60S ribosomal protein 219 4e-56
gi|6831614|sp|Q9Z313|RL13_CRIGR 60S RIBOSOMAL PROTEIN L13 >gnl|B... 218 6e-56
gi|42490910|gb|AAH66320.1| Ribosomal protein L13 [Homo sapiens] 218 7e-56
gi|41150665|ref|XP_371023.1| similar to ribosomal protein L13; 6... 216 4e-55
gi|34860769|ref|XP_212972.2| similar to 60S RIBOSOMAL PROTEIN L1... 213 2e-54
gi|44966222|gb|AAS49551.1| ribosomal protein L13 [Latimeria chal... 207 1e-52
gi|34864659|ref|XP_213131.2| similar to 60S RIBOSOMAL PROTEIN L1... 206 3e-52
gi|28630296|gb|AAN73374.1| ribosomal protein L13 [Scyliorhinus c... 205 5e-52
gi|44968390|gb|AAS49590.1| ribosomal protein L13 [Xenopus laevis] 205 7e-52
gi|38050529|ref|XP_193665.2| similar to 60S ribosomal protein [M... 204 9e-52
gi|44966277|gb|AAS49552.1| ribosomal protein L13 [Protopterus do... 201 7e-51
gi|38076946|ref|XP_194117.2| similar to 60S RIBOSOMAL PROTEIN L1... 200 2e-50
gi|38091681|ref|XP_134284.3| similar to 60S RIBOSOMAL PROTEIN L1... 199 4e-50
gi|47457941|dbj|BAD18973.2| 60S ribosomal protein L13 [Antheraea... 195 5e-49
gi|28630291|gb|AAN73372.1| ribosomal protein L13 [Branchiostoma ... 194 2e-48
gi|21759389|sp|Q962U1|RL13_SPOFR 60S ribosomal protein L13 >gnl|... 193 2e-48
gi|38047875|gb|AAR09840.1| similar to Drosophila melanogaster Rp... 192 4e-48
gi|17647879|ref|NP_523530.1| CG4651-PA [Drosophila melanogaster]... 191 7e-48
gi|18873677|emb|CAC81268.1| putative cold-induced protein [Oryza... 190 2e-47
gi|38080041|ref|XP_139705.2| similar to 60S RIBOSOMAL PROTEIN L1... 188 6e-47
gi|38074304|ref|XP_193995.2| similar to 60S ribosomal protein [M... 188 6e-47
gi|37625523|gb|AAQ96375.1| 60S ribosomal protein L13 [Solanum br... 187 1e-46
gi|34897952|ref|NP_910322.1| ESTs AU077873(S1878),D40121(S1878) ... 187 1e-46
gi|6094006|sp|O46157|RL13_LUMRU 60S RIBOSOMAL PROTEIN L13 >gnl|B... 187 2e-46
gi|2500358|sp|Q95043|RL13_SCHMA 60S RIBOSOMAL PROTEIN L13 (BBC1 ... 186 3e-46
gi|542542|pir||S42877 ribosomal protein L13.e, cytosolic - fruit... 186 4e-46
gi|730449|sp|P41128|R131_BRANA 60S RIBOSOMAL PROTEIN L13-1 (COLD... 185 7e-46
gi|30995339|gb|AAO53449.2| breast basic conserved protein [Schis... 185 7e-46
gi|9738909|gb|AAF97844.1| breast basic conserved protein [Schist... 183 3e-45
gi|7441102|pir||S42553 ribosomal protein L13.A, cytosolic - rape 182 3e-45
gi|730450|sp|P41129|R132_BRANA 60S RIBOSOMAL PROTEIN L13-2 (COLD... 182 5e-45
gi|12580867|emb|CAC27142.1| 60S ribosomal protein L13E [Picea ab... 181 8e-45
gi|7441103|pir||S42555 ribosomal protein L13.B, cytosolic - rape 181 1e-44
gi|15229064|ref|NP_190470.1| 60S ribosomal protein L13 (RPL13B) ... 179 3e-44
gi|38048333|gb|AAR10069.1| similar to Drosophila melanogaster Rp... 178 7e-44
gi|21537149|gb|AAM61490.1| 60S ribosomal protein L13, BBC1 prote... 178 7e-44
gi|28894834|gb|AAO61436.1| Ribosomal protein, large subunit prot... 176 3e-43
gi|38078351|ref|XP_143757.3| similar to 60S ribosomal protein L1... 176 4e-43
gi|6831610|sp|O48513|RL13_CHLSW 60S RIBOSOMAL PROTEIN L13 (BBC1 ... 175 7e-43
gi|15237847|ref|NP_197778.1| 60S ribosomal protein L13 (RPL13D) ... 175 7e-43
gi|34852293|ref|XP_227996.2| similar to 60S RIBOSOMAL PROTEIN L1... 172 4e-42
gi|19114365|ref|NP_593453.1| 60s ribosomal protein L13 [Schizosa... 170 2e-41
gi|28193496|emb|CAD28610.1| 60S ribosomal protein L13 [Polytomel... 169 4e-41
gi|50254776|gb|EAL17521.1| hypothetical protein CNBM0880 [Crypto... 167 1e-40
gi|12834184|dbj|BAB22815.1| unnamed protein product [Mus musculus] 167 2e-40
gi|49072500|ref|XP_400539.1| hypothetical protein UM02924.1 [Ust... 166 3e-40
gi|28630293|gb|AAN73373.1| ribosomal protein L13 [Myxine glutinosa] 162 4e-39
gi|50546693|ref|XP_500816.1| hypothetical protein [Yarrowia lipo... 160 1e-38
gi|32409857|ref|XP_325409.1| hypothetical protein [Neurospora cr... 160 2e-38
gi|27705136|ref|XP_228088.1| similar to 60S RIBOSOMAL PROTEIN L1... 157 2e-37
gi|38103015|gb|EAA49778.1| hypothetical protein MG09769.4 [Magna... 155 5e-37
gi|15229059|ref|NP_190465.1| 60S ribosomal protein L13 (RPL13C) ... 154 2e-36
gi|46127915|ref|XP_388511.1| hypothetical protein FG08335.1 [Gib... 152 4e-36
gi|49103308|ref|XP_411140.1| hypothetical protein AN7003.2 [Aspe... 152 4e-36
gi|45188130|ref|NP_984353.1| ADR257Cp [Eremothecium gossypii] >g... 152 4e-36
gi|1350664|sp|P49627|RL13_TOBAC 60S RIBOSOMAL PROTEIN L13 (CLONE... 152 5e-36
gi|50293329|ref|XP_449076.1| unnamed protein product [Candida gl... 151 9e-36
gi|50309867|ref|XP_454947.1| unnamed protein product [Kluyveromy... 150 1e-35
gi|28564077|gb|AAO32417.1| RPL13 [Saccharomyces bayanus] 149 3e-35
gi|6323791|ref|NP_013862.1| Protein component of the large (60S)... 148 7e-35
gi|28564988|gb|AAO32577.1| RPL13 [Saccharomyces kluyveri] 147 1e-34
gi|6320121|ref|NP_010201.1| Protein component of the large (60S)... 147 2e-34
gi|27679772|ref|XP_219309.1| similar to 60S RIBOSOMAL PROTEIN L1... 146 4e-34
gi|28564075|gb|AAO32416.1| RPL13 [Saccharomyces bayanus] 146 4e-34
gi|28564864|gb|AAO32516.1| RPL13 [Saccharomyces castellii] 145 8e-34
gi|28564866|gb|AAO32517.1| RPL13 [Saccharomyces castellii] 144 1e-33
gi|50420591|ref|XP_458832.1| unnamed protein product [Debaryomyc... 142 4e-33
gi|6094005|sp|O59931|RL13_CANAL 60S ribosomal protein L13 >gnl|B... 142 5e-33
gi|34582395|sp|Q876B2|RL13_SACEX 60S ribosomal protein L13 >gnl|... 141 9e-33
gi|28564161|gb|AAO32459.1| RPL13 [Saccharomyces servazzii] 140 2e-32
gi|34863308|ref|XP_233969.2| similar to ribosomal protein L13 [R... 117 1e-25
gi|34932129|ref|XP_344691.1| similar to 60S ribosomal protein L1... 117 2e-25
gi|23482814|gb|EAA18687.1| Ribosomal protein L13e [Plasmodium yo... 115 9e-25
gi|27714695|ref|XP_233045.1| similar to 60S RIBOSOMAL PROTEIN L1... 112 4e-24
gi|34880598|ref|XP_346307.1| similar to 60S RIBOSOMAL PROTEIN L1... 111 1e-23
gi|16923265|dbj|BAB71993.1| BBC1-like protein [Oryza sativa (jap... 110 2e-23
gi|31241649|ref|XP_321255.1| ENSANGP00000018501 [Anopheles gambi... 109 5e-23
gi|23612876|ref|NP_704415.1| 60S ribosomal protein L13, putative... 106 3e-22
gi|19698566|gb|AAL93210.1| BBC1-like protein [Triticum aestivum] 105 9e-22
gi|2350972|dbj|BAA22012.1| ribosomal protein L13 [Entamoeba hist... 104 1e-21
gi|34877854|ref|XP_344502.1| similar to ribosomal protein L13 [R... 102 8e-21
gi|34881839|ref|XP_346373.1| similar to FMR2 protein [Rattus nor... 100 4e-20
gi|6103731|gb|AAF03752.1| breast basic conserved protein 1 [Ovis... 97 3e-19
gi|38076520|ref|XP_355403.1| similar to 60S ribosomal protein L1... 92 1e-17
gi|19172993|ref|NP_597544.1| 60S RIBOSOMAL PROTEIN L13 [Encephal... 87 2e-16
gi|38076321|ref|XP_354819.1| similar to 60S ribosomal protein L1... 87 3e-16
gi|38087596|ref|XP_355959.1| similar to ribosomal protein L13 [M... 87 3e-16
gi|34861644|ref|XP_345318.1| similar to BBC1 [Rattus norvegicus] 85 1e-15
gi|38084872|ref|XP_355149.1| similar to 60S RIBOSOMAL PROTEIN L1... 82 6e-15
gi|34879070|ref|XP_341253.1| similar to ribosomal protein L13 [R... 80 2e-14
gi|34878041|ref|XP_341223.1| similar to ribosomal protein L13 [R... 79 9e-14
gi|34868155|ref|XP_343329.1| similar to ribosomal protein L13 [R... 78 1e-13
gi|34871643|ref|XP_220610.2| similar to 60S ribosomal protein L1... 77 3e-13
gi|13812298|ref|NP_113416.1| 60S ribosomal protein L13 [Guillard... 74 2e-12
gi|2275278|gb|AAB63864.1| unknown [Schizosaccharomyces pombe] 64 3e-09
gi|38086541|ref|XP_141996.3| similar to 60S ribosomal protein L9... 62 9e-09
gi|20345306|ref|XP_111017.1| similar to 60S ribosomal protein L1... 58 2e-07
gi|398920|emb|CAA80342.1| cold induced protein (BnC24B) [Brassic... 53 4e-06
gi|18312773|ref|NP_559440.1| ribosomal protein L13 [Pyrobaculum ... 44 0.002
gi|15920938|ref|NP_376607.1| 77aa long hypothetical 50S ribosoma... 44 0.003
gi|15899190|ref|NP_343795.1| LSU ribosomal protein L13E (rpl13E)... 44 0.003
gi|42657601|ref|XP_379402.1| hypothetical protein XP_379402 [Hom... 44 0.003
gi|17865551|sp|Q97W05|R13E_SULSO 50S ribosomal protein L13e 44 0.003
gi|17865769|sp|Q9YEN9|R13E_AERPE 50S ribosomal protein L13e 42 0.010
gi|14600790|ref|NP_147311.1| 50S ribosomal protein L13 [Aeropyru... 42 0.010
gi|2895288|gb|AAC38188.1| DotG [Legionella pneumophila] 37 0.40
gi|7465643|pir||T18334 icmE protein - Legionella pneumophila >gn... 37 0.40
gi|15789609|ref|NP_279433.1| chromosome segregation; Smc1 [Halob... 36 0.68
gi|1617569|gb|AAB57888.1| putative transposase [Rhodococcus opacus] 34 2.0
gi|29654917|ref|NP_820609.1| IcmE protein [Coxiella burnetii RSA... 34 2.0
gi|46138571|ref|XP_390976.1| hypothetical protein FG10800.1 [Gib... 34 2.0
gi|17506851|ref|NP_492136.1| lipopolysaccharide specific protein... 33 3.4
gi|31203147|ref|XP_310522.1| ENSANGP00000022750 [Anopheles gambi... 33 4.4
gi|31203145|ref|XP_310521.1| ENSANGP00000017309 [Anopheles gambi... 33 4.4
gi|34867177|ref|XP_232785.2| similar to RAD54B homolog isoform 1... 33 4.4
gi|48731480|ref|ZP_00265225.1| COG0845: Membrane-fusion protein ... 33 4.4
gi|47211279|emb|CAF90397.1| unnamed protein product [Tetraodon n... 33 5.8
gi|48788736|ref|ZP_00284715.1| COG4783: Putative Zn-dependent pr... 32 7.6
gi|15898703|ref|NP_343308.1| Amino acid transporter related prot... 32 9.9
gi|20093524|ref|NP_613371.1| Fe-S-cluster-containing hydrogenase... 32 9.9
gi|39936914|ref|NP_949190.1| hypothetical protein RPA3853 [Rhodo... 32 9.9
>gi|17505793|ref|NP_491220.1| ribosomal protein L13, Ribosomal
Protein, Large subunit (23.8 kD) (rpl-13)
[Caenorhabditis elegans]
gi|6094004|sp|P91128|RL13_CAEEL 60S ribosomal protein L13
gi|7496848|pir||T25599 hypothetical protein C32E8.2 -
Caenorhabditis elegans
gi|1825726|gb|AAB42322.1| Ribosomal protein, large subunit protein
13, isoform a [Caenorhabditis elegans]
Length = 207
Score = 372 bits (955), Expect = e-102
Identities = 188/188 (100%), Positives = 188/188 (100%)
Frame = +1
Query: 1 MAPRGNQMLGNAHFRKHWHKRIKTWFDQPARKLRRRQNRQAKAVEIAPRPVAGLLRSVVR 180
MAPRGNQMLGNAHFRKHWHKRIKTWFDQPARKLRRRQNRQAKAVEIAPRPVAGLLRSVVR
Sbjct: 1 MAPRGNQMLGNAHFRKHWHKRIKTWFDQPARKLRRRQNRQAKAVEIAPRPVAGLLRSVVR 60
Query: 181 CPQKRYNTKTRLGRGFSLQELKAAGISQAQARTIGIAVDVRRTNKTAEGLKANADRLKEY 360
CPQKRYNTKTRLGRGFSLQELKAAGISQAQARTIGIAVDVRRTNKTAEGLKANADRLKEY
Sbjct: 61 CPQKRYNTKTRLGRGFSLQELKAAGISQAQARTIGIAVDVRRTNKTAEGLKANADRLKEY 120
Query: 361 KAKLILFPKKASAPKKGDSSAEELKVAAQLRGDVLPLSHTITFDEPRQVTDAERKVEIFR 540
KAKLILFPKKASAPKKGDSSAEELKVAAQLRGDVLPLSHTITFDEPRQVTDAERKVEIFR
Sbjct: 121 KAKLILFPKKASAPKKGDSSAEELKVAAQLRGDVLPLSHTITFDEPRQVTDAERKVEIFR 180
Query: 541 LLRKERAD 564
LLRKERAD
Sbjct: 181 LLRKERAD 188