Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= C27C12_7
(1160 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|17550664|ref|NP_510467.1| putative protein family member (XP4... 739 0.0
gi|17567411|ref|NP_510468.1| predicted CDS, putative protein fam... 368 e-100
gi|17567415|ref|NP_510470.1| putative protein family member (XP4... 346 7e-94
gi|17567413|ref|NP_510469.1| putative nuclear protein family mem... 277 3e-73
gi|39590712|emb|CAE65082.1| Hypothetical protein CBG09940 [Caeno... 87 7e-16
gi|17508581|ref|NP_492051.1| yeast BUB homolog (112.0 kD) (bub-1... 85 4e-15
gi|6321451|ref|NP_011528.1| Protein that functions as an osmosen... 39 0.18
gi|46443810|gb|EAL03089.1| hypothetical protein CaO19.3959 [Cand... 37 0.67
gi|7493807|pir||T30524 protein phosphatase Ssd1 homolog - yeast ... 37 0.67
gi|46443975|gb|EAL03253.1| hypothetical protein CaO19.11441 [Can... 37 0.67
gi|1809290|gb|AAB41671.1| adenomatous polyposis coli [Xenopus la... 36 1.5
gi|26324620|dbj|BAC26064.1| unnamed protein product [Mus musculus] 36 2.0
gi|8393186|ref|NP_058768.1| carbamoyl-phosphate synthetase 1; Ca... 36 2.0
gi|46445020|gb|EAL04291.1| hypothetical protein CaO19.13364 [Can... 36 2.0
gi|38049603|ref|XP_129769.4| similar to Carbamoyl-phosphate synt... 36 2.0
gi|45595694|gb|AAH67211.1| Cps1 protein [Mus musculus] 36 2.0
gi|21361331|ref|NP_001866.2| carbamoyl-phosphate synthetase 1, m... 35 2.5
gi|87018|pir||JQ1348 carbamoyl-phosphate synthase (ammonia) (EC ... 35 2.5
gi|34364603|emb|CAE45707.1| hypothetical protein [Homo sapiens] 35 2.5
gi|32481925|gb|AAP84318.1| CPS1 isoform [Homo sapiens] 35 2.5
gi|5921957|sp|Q91293|CPSM_RANCA Carbamoyl-phosphate synthase [am... 35 3.3
gi|48097430|ref|XP_393782.1| similar to ENSANGP00000004546 [Apis... 35 3.3
gi|20093292|ref|NP_619367.1| DNA helicase RecQ [Methanosarcina a... 35 3.3
gi|33358327|gb|AAQ16635.1| vitellogenin [Rivulus marmoratus] 35 4.3
gi|19114339|ref|NP_593427.1| putative RNA-binding protein [Schiz... 35 4.3
gi|16264678|ref|NP_437470.1| putative glucuronate isomerase (uro... 35 4.3
gi|26000382|gb|AAN75473.1| dentin matrix protein 1 [Mormoops meg... 34 5.7
gi|27469167|ref|NP_765804.1| streptococcal hemagglutinin protein... 34 5.7
gi|3676338|gb|AAC61897.1| myristoylated alanine-rich C kinase su... 34 7.4
gi|17560816|ref|NP_506530.1| predicted CDS, sushi domain/SCR dom... 33 9.7
gi|48474649|sp|Q9HDY9|YK02_SCHPO Hypothetical serine/threonine-r... 33 9.7
>gi|17550664|ref|NP_510467.1| putative protein family member (XP482)
[Caenorhabditis elegans]
gi|7496589|pir||T19517 hypothetical protein C27C12.3 - Caenorhabditis
elegans
gi|3892137|emb|CAA93745.1| Hypothetical protein C27C12.3
[Caenorhabditis elegans]
gi|3892146|emb|CAA93753.1| Hypothetical protein C27C12.3
[Caenorhabditis elegans]
Length = 400
Score = 739 bits (1908), Expect = 0.0
Identities = 374/385 (97%), Positives = 374/385 (97%)
Frame = -3
Query: 1158 VVTPIEQSFQHLANAPTSFNLIRFTMEMSKLAKELPFEEAKAGLIKSMTNILHDEKFEKI 979
VVTPIEQSFQHLANAPTSFNLIRFTMEMSKLAKELPFEEAKAGLIKSMTNILHDEKFEKI
Sbjct: 16 VVTPIEQSFQHLANAPTSFNLIRFTMEMSKLAKELPFEEAKAGLIKSMTNILHDEKFEKI 75
Query: 978 RGDXXXXXXXXXXXKCSTKIGGTEVYNQAYGIGLFNKYKEFYFQWAHECGKMKAVSEFRT 799
RGD KCSTKIGGTEVYNQAYGIGLFNKYKEFYFQWAHECGKMKAVSEFRT
Sbjct: 76 RGDEAMLKLLELLAKCSTKIGGTEVYNQAYGIGLFNKYKEFYFQWAHECGKMKAVSEFRT 135
Query: 798 VFHLARSQLYFQMPPTSIESDFEKIFQQYFGKLSMHHCLERTETLNKLFAGCSIEEIASA 619
VFHLARSQLYFQMPPTSIESDFEKIFQQYFGKLSMHHCLERTETLNKLFAGCSIEEIASA
Sbjct: 136 VFHLARSQLYFQMPPTSIESDFEKIFQQYFGKLSMHHCLERTETLNKLFAGCSIEEIASA 195
Query: 618 ENNMSFGNSRKLSGKSVNVRSNHRVLEVARETMNSSDISPNKNTSSVLLDGSPSTIWPPS 439
ENNMSFGNSRKLSGKSVNVRSNHRVLEVARETMNSSDISPNKNTSSVLLDGSPSTIWPPS
Sbjct: 196 ENNMSFGNSRKLSGKSVNVRSNHRVLEVARETMNSSDISPNKNTSSVLLDGSPSTIWPPS 255
Query: 438 DSLELPRSIQMRKCERESVKADTFSMSGQSFDDRSFAKSKGMIAQNLAISTTVGSQKDIL 259
DSLELPRSIQMRKCERESVKADTFSMSGQSFDDRSFAKSKGMIAQNLAISTTVGSQKDIL
Sbjct: 256 DSLELPRSIQMRKCERESVKADTFSMSGQSFDDRSFAKSKGMIAQNLAISTTVGSQKDIL 315
Query: 258 HREPVKGNSVLEASTCSTPKKDTSIVDFGTYIKNQVHQTSSTMRNSRRRKLAATVTSTES 79
HREPVKGNSVLEASTCSTPKKDTSIVDFGTYIKNQVHQTSSTMRNSRRRKLAATVTSTES
Sbjct: 316 HREPVKGNSVLEASTCSTPKKDTSIVDFGTYIKNQVHQTSSTMRNSRRRKLAATVTSTES 375
Query: 78 PMKQPRMTTGIFSDRASTIFGGTKH 4
PMKQPRMTTGIFSDRASTIFGGTKH
Sbjct: 376 PMKQPRMTTGIFSDRASTIFGGTKH 400