Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= C05C10_3
(4656 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|17531515|ref|NP_496142.1| regulator of nonsense transcripts f... 3068 0.0
gi|17531513|ref|NP_496141.1| regulator of nonsense transcripts f... 3063 0.0
gi|39589213|emb|CAE57946.1| Hypothetical protein CBG01003 [Caeno... 1215 0.0
gi|39579679|emb|CAE56511.1| Hypothetical protein CBG24231 [Caeno... 791 0.0
gi|39579473|emb|CAE56882.1| Hypothetical protein CBG24721 [Caeno... 729 0.0
gi|39582377|emb|CAE74761.1| Hypothetical protein CBG22588 [Caeno... 716 0.0
gi|34555849|emb|CAA99786.2| Hypothetical protein C44H9.4 [Caenor... 683 0.0
gi|17558612|ref|NP_506213.1| regulator of nonsense transcripts f... 680 0.0
gi|39585742|emb|CAE59944.1| Hypothetical protein CBG03431 [Caeno... 556 e-156
gi|17558610|ref|NP_506212.1| predicted CDS, putative cytoplasmic... 496 e-138
gi|17541326|ref|NP_500503.1| predicted CDS, putative cytoplasmic... 162 7e-38
gi|39579637|emb|CAE56861.1| Hypothetical protein CBG24691 [Caeno... 157 2e-36
gi|17535407|ref|NP_496354.1| putative nuclear protein family mem... 127 2e-27
gi|32405938|ref|XP_323582.1| hypothetical protein ( (AL451022) p... 119 7e-25
gi|39583772|emb|CAE74845.1| Hypothetical protein CBG22691 [Caeno... 118 2e-24
gi|50746881|ref|XP_426326.1| PREDICTED: similar to prematurely t... 117 2e-24
gi|23507861|ref|NP_700531.1| regulator of nonsense transcripts, ... 117 3e-24
gi|17380277|sp|O76512|RNT1_CAEEL Regulator of nonsense transcrip... 115 8e-24
gi|50303751|ref|XP_451821.1| unnamed protein product [Kluyveromy... 115 1e-23
gi|17510163|ref|NP_490829.1| suppressor with Morphological effec... 115 1e-23
gi|46136829|ref|XP_390106.1| RNT1_NEUCR Regulator of nonsense tr... 115 1e-23
gi|39582603|emb|CAE63922.1| Hypothetical protein CBG08494 [Caeno... 114 3e-23
gi|38016158|ref|NP_619643.2| prematurely terminated mRNA decay f... 114 3e-23
gi|49085300|ref|XP_404783.1| hypothetical protein AN0646.2 [Aspe... 113 5e-23
gi|26338079|dbj|BAC32725.1| unnamed protein product [Mus musculus] 112 6e-23
gi|50422551|ref|XP_459847.1| unnamed protein product [Debaryomyc... 112 1e-22
gi|50551471|ref|XP_503209.1| hypothetical protein [Yarrowia lipo... 111 2e-22
gi|19577367|emb|CAD28448.1| possible regulator of nonsense trans... 110 3e-22
gi|42820708|emb|CAF32021.1| regulator of nonsense transcripts, p... 110 3e-22
gi|50286349|ref|XP_445603.1| unnamed protein product [Candida gl... 110 3e-22
gi|38102483|gb|EAA49318.1| hypothetical protein MG00976.4 [Magna... 110 4e-22
gi|50259177|gb|EAL21852.1| hypothetical protein CNBC4250 [Crypto... 110 4e-22
gi|23485801|gb|EAA20580.1| nonsense mRNA reducing factor 1-relat... 109 7e-22
gi|6323726|ref|NP_013797.1| Component of the nonsense-mediated m... 108 2e-21
gi|49067124|ref|XP_397852.1| hypothetical protein UM00237.1 [Ust... 107 3e-21
gi|15220521|ref|NP_172037.1| RNA helicase SDE3 (SDE3) [Arabidops... 107 3e-21
gi|13811296|gb|AAK40099.1| RNA helicase SDE3 [Arabidopsis thaliana] 107 3e-21
gi|25406843|pir||C86189 protein T25N20.11 [imported] - Arabidops... 107 3e-21
gi|46438461|gb|EAK97791.1| hypothetical protein CaO19.939 [Candi... 107 4e-21
gi|34859985|ref|XP_227717.2| similar to hypothetical protein FLJ... 105 8e-21
gi|1885356|gb|AAC51140.1| type 1 RNA helicase pNORF1 104 2e-20
gi|47087327|ref|NP_998639.1| regulator of nonsense transcripts 1... 103 5e-20
gi|17380291|sp|Q92900|RNT1_HUMAN Regulator of nonsense transcrip... 103 5e-20
gi|50761112|ref|XP_418237.1| PREDICTED: similar to regulator of ... 103 5e-20
gi|47216421|emb|CAG01972.1| unnamed protein product [Tetraodon n... 103 5e-20
gi|18375673|ref|NP_002902.2| regulator of nonsense transcripts 1... 103 5e-20
gi|49116641|gb|AAH73441.1| Unknown (protein for MGC:80941) [Xeno... 103 5e-20
gi|40788920|dbj|BAA19664.2| KIAA0221 [Homo sapiens] 103 5e-20
gi|15221015|ref|NP_172361.1| DNA replication helicase, putative ... 102 9e-20
gi|18859757|ref|NP_572767.1| CG1559-PA [Drosophila melanogaster]... 102 1e-19
gi|2130283|pir||S62476 hypothetical protein SPAC16C9.06c - fissi... 102 1e-19
gi|19113992|ref|NP_593080.1| putative regulator of nonsense tran... 102 1e-19
gi|33989570|gb|AAH56442.1| Rent1 protein [Mus musculus] 101 1e-19
gi|45185251|ref|NP_982968.1| ABR022Cp [Eremothecium gossypii] >g... 101 1e-19
gi|38089666|ref|XP_356130.1| similar to regulator of nonsense tr... 101 1e-19
gi|13507601|ref|NP_109605.1| regulator of nonsense transcripts 1... 101 1e-19
gi|11359050|pir||T51292 Dna2p - fission yeast (Schizosaccharomyc... 101 2e-19
gi|18202906|sp|Q9FJR0|RNT1_ARATH Regulator of nonsense transcrip... 101 2e-19
gi|19569060|gb|AAL92018.1| UPF1 [Arabidopsis thaliana] 101 2e-19
gi|30695086|ref|NP_199512.2| RNA helicase, putative [Arabidopsis... 101 2e-19
gi|19113291|ref|NP_596499.1| dna replication helicase [Schizosac... 101 2e-19
gi|11359934|pir||T46441 hypothetical protein DKFZp434C0927.1 - h... 100 3e-19
gi|49071376|ref|XP_399977.1| hypothetical protein UM02362.1 [Ust... 100 4e-19
gi|1575536|gb|AAC50771.1| regulator of nonsense transcript stabi... 100 6e-19
gi|31243165|ref|XP_322028.1| ENSANGP00000004153 [Anopheles gambi... 99 7e-19
gi|18202669|sp|Q98TR3|RNT1_FUGRU Putative regulator of nonsense ... 99 7e-19
gi|48727634|gb|AAT46119.1| RENT1 [Mus musculus] 99 7e-19
gi|21410895|gb|AAH30916.1| Rent1 protein [Mus musculus] 99 1e-18
gi|50256219|gb|EAL18946.1| hypothetical protein CNBI2070 [Crypto... 99 1e-18
gi|20987322|gb|AAH30185.1| 4930422G04Rik protein [Mus musculus] 97 3e-18
gi|28573499|ref|NP_725650.2| CG6967-PB [Drosophila melanogaster]... 97 5e-18
gi|28573498|ref|NP_611185.2| CG6967-PA [Drosophila melanogaster]... 97 5e-18
gi|48132934|ref|XP_393330.1| similar to ENSANGP00000004153 [Apis... 96 8e-18
gi|47217411|emb|CAG00771.1| unnamed protein product [Tetraodon n... 95 1e-17
gi|34901794|ref|NP_912243.1| putaitive UPF1 [Oryza sativa (japon... 93 5e-17
gi|50509972|dbj|BAD30435.1| putative type 1 RNA helicase [Oryza ... 93 5e-17
gi|50293955|ref|XP_449389.1| unnamed protein product [Candida gl... 92 9e-17
gi|37572251|gb|AAH32622.1| KIAA0625 protein [Homo sapiens] 92 1e-16
gi|7022724|dbj|BAA91701.1| unnamed protein product [Homo sapiens... 92 1e-16
gi|50603852|gb|AAH78166.1| Unknown (protein for IMAGE:6178156) [... 92 1e-16
gi|17402235|emb|CAD13341.1| bA479K20.2 (KIAA0625 protein) [Homo ... 92 1e-16
gi|34327966|dbj|BAA31600.2| KIAA0625 protein [Homo sapiens] 92 1e-16
gi|38195410|gb|AAR13367.1| ataxia/oculomotor apraxia protein 2 [... 92 1e-16
gi|37620159|ref|NP_055861.2| KIAA0625 protein [Homo sapiens] >gn... 92 1e-16
gi|17533987|ref|NP_496516.1| yeast DNA helicase/endonuclease fam... 92 2e-16
gi|17533985|ref|NP_496515.1| yeast DNA helicase/endonuclease fam... 92 2e-16
gi|50254922|gb|EAL17662.1| hypothetical protein CNBL1770 [Crypto... 91 2e-16
gi|34896974|ref|NP_909833.1| putative component of a tRNA splici... 91 3e-16
gi|15607027|ref|NP_214409.1| DNA helicase [Aquifex aeolicus VF5]... 91 3e-16
gi|50749284|ref|XP_421569.1| PREDICTED: similar to DNA2-like hom... 90 4e-16
gi|11498984|ref|NP_070217.1| DNA helicase, putative [Archaeoglob... 89 8e-16
gi|19704777|ref|NP_604339.1| DNA helicase [Fusobacterium nucleat... 89 8e-16
gi|37536462|ref|NP_922533.1| putative helicase [Oryza sativa (ja... 89 1e-15
gi|28386070|gb|AAH46382.1| AW060766 protein [Mus musculus] 89 1e-15
gi|37574140|ref|NP_932150.1| expressed sequence AW060766 [Mus mu... 89 1e-15
gi|42475934|tpg|DAA01946.1| TPA: senataxin; DEAxQ-box helicase; ... 89 1e-15
gi|39597465|emb|CAE59695.1| Hypothetical protein CBG03123 [Caeno... 88 2e-15
gi|24660647|ref|NP_648177.1| CG7504-PA [Drosophila melanogaster]... 87 3e-15
gi|45359144|ref|NP_988701.1| putative DNA helicase [Methanococcu... 87 3e-15
gi|34853159|ref|XP_342401.1| similar to hypothetical protein [Ra... 87 4e-15
gi|29248662|gb|EAA40191.1| GLP_393_59373_57169 [Giardia lamblia ... 87 5e-15
gi|29247037|gb|EAA38613.1| GLP_226_38825_42739 [Giardia lamblia ... 87 5e-15
gi|6321024|ref|NP_011103.1| DNA dependent ATPase/DNA helicase be... 86 1e-14
gi|18845092|gb|AAL79550.1| helicase [Xenopus laevis] 86 1e-14
gi|15642780|ref|NP_227821.1| DNA helicase, putative [Thermotoga ... 85 1e-14
gi|50554637|ref|XP_504727.1| hypothetical protein [Yarrowia lipo... 84 2e-14
gi|19115031|ref|NP_594119.1| DNA2-NAM7 helicase family protein [... 84 3e-14
gi|32487796|emb|CAE05419.1| OSJNBa0035I04.7 [Oryza sativa (japon... 84 4e-14
gi|19112847|ref|NP_596055.1| tRNA-splicing endonuclease positive... 83 7e-14
gi|39589605|emb|CAE66840.1| Hypothetical protein CBG12210 [Caeno... 83 7e-14
gi|50757261|ref|XP_415453.1| PREDICTED: similar to KIAA0625 prot... 82 9e-14
gi|50289833|ref|XP_447348.1| unnamed protein product [Candida gl... 82 1e-13
gi|34852480|ref|XP_241671.2| similar to DNA2-like homolog (DNA r... 82 1e-13
gi|38346797|emb|CAD41365.2| OSJNBa0088A01.4 [Oryza sativa (japon... 82 2e-13
gi|50302599|ref|XP_451235.1| unnamed protein product [Kluyveromy... 82 2e-13
gi|21711689|gb|AAM75035.1| LD17208p [Drosophila melanogaster] 82 2e-13
gi|45550425|ref|NP_610920.2| CG6701-PA [Drosophila melanogaster]... 82 2e-13
gi|6322835|ref|NP_012908.1| Hexameric DNA polymerase alpha-assoc... 82 2e-13
gi|42566850|ref|NP_193292.3| tRNA-splicing endonuclease positive... 81 2e-13
gi|45201204|ref|NP_986774.1| AGR108Cp [Eremothecium gossypii] >g... 81 2e-13
gi|7485995|pir||T00740 hypothetical protein F22O13.35 - Arabidop... 81 3e-13
gi|2340994|gb|AAB67523.1| Sen1p [Saccharomyces cerevisiae] 80 4e-13
gi|172574|gb|AAB63976.1| SEN1 [Saccharomyces cerevisiae] 80 4e-13
gi|6323462|ref|NP_013534.1| Nuclear protein, putative helicase r... 80 4e-13
gi|50303681|ref|XP_451783.1| unnamed protein product [Kluyveromy... 80 5e-13
gi|19483918|gb|AAH25182.1| Unknown (protein for IMAGE:5035239) [... 80 5e-13
gi|32414403|ref|XP_327681.1| hypothetical protein [Neurospora cr... 80 6e-13
gi|15219364|ref|NP_173124.1| tRNA-splicing endonuclease positive... 80 6e-13
gi|25518059|pir||D86303 F17F16.1 protein - Arabidopsis thaliana ... 80 6e-13
gi|42734059|gb|AAS38931.1| similar to Rattus norvegicus (Rat). A... 80 6e-13
gi|38090494|ref|XP_125654.4| RIKEN cDNA E130315B21 gene [Mus mus... 79 8e-13
gi|37359766|dbj|BAC97861.1| mKIAA0083 protein [Mus musculus] 79 8e-13
gi|46849783|ref|NP_796346.1| RIKEN cDNA E130315B21 gene [Mus mus... 79 8e-13
gi|20380180|gb|AAH28188.1| Unknown (protein for IMAGE:4385301) [... 79 8e-13
gi|10177999|dbj|BAB11372.1| unnamed protein product [Arabidopsis... 79 8e-13
gi|37530612|ref|NP_919608.1| putative DNA2-NAM7 helicase family ... 79 8e-13
gi|15240128|ref|NP_198531.1| tRNA-splicing endonuclease positive... 79 1e-12
gi|41149313|ref|XP_166103.3| DNA2 DNA replication helicase 2-lik... 79 1e-12
gi|2506893|sp|P51530|DN2L_HUMAN DNA2-like homolog (DNA replicati... 79 1e-12
gi|50413921|ref|XP_457339.1| unnamed protein product [Debaryomyc... 79 1e-12
gi|31657176|gb|AAH53574.1| DNA2L protein [Homo sapiens] 79 1e-12
gi|34783461|gb|AAH41115.1| DNA2L protein [Homo sapiens] 79 1e-12
gi|49072214|ref|XP_400396.1| hypothetical protein UM02781.1 [Ust... 79 1e-12
gi|20093510|ref|NP_613357.1| Superfamily I DNA/RNA helicase [Met... 78 2e-12
gi|47218708|emb|CAG05680.1| unnamed protein product [Tetraodon n... 77 3e-12
gi|15242273|ref|NP_200022.1| tRNA-splicing endonuclease positive... 77 4e-12
gi|9758526|dbj|BAB08973.1| unnamed protein product [Arabidopsis ... 77 4e-12
gi|15239483|ref|NP_198519.1| tRNA-splicing endonuclease positive... 77 4e-12
gi|50546118|ref|XP_500586.1| hypothetical protein [Yarrowia lipo... 77 4e-12
gi|50404879|ref|YP_053971.1| TRNA-splicing endonuclease positive... 77 5e-12
gi|15645075|ref|NP_207245.1| conserved hypothetical protein [Hel... 77 5e-12
gi|46135987|ref|XP_389685.1| hypothetical protein FG09509.1 [Gib... 77 5e-12
gi|45190389|ref|NP_984643.1| AEL218Wp [Eremothecium gossypii] >g... 76 7e-12
gi|27660592|ref|XP_227549.1| similar to Potentail helicase MOV-1... 76 7e-12
gi|32471647|ref|NP_864640.1| DNA-binding protein SMUBP-2 [Pirell... 76 7e-12
gi|17510845|ref|NP_492670.1| putative protein of ancient origin ... 76 7e-12
gi|15218807|ref|NP_176757.1| tRNA-splicing endonuclease positive... 76 9e-12
gi|50511033|dbj|BAD32502.1| mKIAA1631 protein [Mus musculus] 76 9e-12
gi|6678920|ref|NP_032645.1| Moloney leukemia virus 10 [Mus muscu... 76 9e-12
gi|50403726|sp|P23249|MV10_MOUSE Potential helicase MOV-10 (Molo... 76 9e-12
gi|50426495|ref|XP_461844.1| unnamed protein product [Debaryomyc... 76 9e-12
gi|13812387|ref|NP_113505.1| sen1 [Guillardia theta] >gnl|BL_ORD... 75 1e-11
gi|31240439|ref|XP_320633.1| ENSANGP00000021264 [Anopheles gambi... 75 1e-11
gi|11499542|ref|NP_070784.1| DNA helicase, putative [Archaeoglob... 75 1e-11
gi|23481586|gb|EAA17820.1| nam7 protein [Plasmodium yoelii yoelii] 75 1e-11
gi|46433687|gb|EAK93119.1| hypothetical protein CaO19.1192 [Cand... 75 1e-11
gi|38100409|gb|EAA47541.1| hypothetical protein MG02784.4 [Magna... 75 2e-11
gi|32266524|ref|NP_860556.1| conserved hypothetical protein [Hel... 75 2e-11
gi|32488773|emb|CAE04326.1| OSJNBb0016D16.17 [Oryza sativa (japo... 75 2e-11
gi|46133873|ref|XP_389252.1| hypothetical protein FG09076.1 [Gib... 75 2e-11
gi|45190721|ref|NP_984975.1| AER115Wp [Eremothecium gossypii] >g... 74 3e-11
gi|10178000|dbj|BAB11373.1| unnamed protein product [Arabidopsis... 74 3e-11
gi|15240130|ref|NP_198532.1| tRNA-splicing endonuclease positive... 74 3e-11
gi|31199739|ref|XP_308817.1| ENSANGP00000021787 [Anopheles gambi... 74 4e-11
gi|50728098|ref|XP_415982.1| PREDICTED: similar to MOV10-like 1;... 74 4e-11
gi|24214798|ref|NP_712279.1| putative helicase [Leptospira inter... 74 4e-11
gi|38075259|ref|XP_130703.4| expressed sequence AI481105 [Mus mu... 73 6e-11
gi|50251911|dbj|BAD27849.1| tRNA-splicing endonuclease positive ... 73 6e-11
gi|18976944|ref|NP_578301.1| dna2-nam7 helicase family protein [... 73 6e-11
gi|14520327|ref|NP_125802.1| dna helicase related protein [Pyroc... 73 6e-11
gi|10177997|dbj|BAB11370.1| unnamed protein product [Arabidopsis... 73 6e-11
gi|15679629|ref|NP_276746.1| transcriptional control factor (enh... 73 7e-11
gi|15668275|ref|NP_247068.1| DNA-binding protein, probably DNA h... 73 7e-11
gi|23612437|ref|NP_703998.1| erythrocyte membrane-associated ant... 73 7e-11
gi|45657684|ref|YP_001770.1| conserved hypothetical protein [Lep... 73 7e-11
gi|23612667|ref|NP_704228.1| regulator of nonsense transcripts 1... 73 7e-11
gi|19074775|ref|NP_586281.1| INVOLVED IN mRNA DECAY CONTROL (DNA... 73 7e-11
gi|14590762|ref|NP_142832.1| DNA-binding protein [Pyrococcus hor... 72 1e-10
gi|23126434|ref|ZP_00108330.1| COG1112: Superfamily I DNA and RN... 72 1e-10
gi|14521437|ref|NP_126913.1| DNA helicase, putative [Pyrococcus ... 72 1e-10
gi|29347483|ref|NP_810986.1| putative helicase [Bacteroides thet... 72 1e-10
gi|15790495|ref|NP_280319.1| DNA helicase; Hel [Halobacterium sp... 72 2e-10
gi|42566323|ref|NP_567301.2| tRNA-splicing endonuclease positive... 71 2e-10
gi|50758737|ref|XP_417395.1| PREDICTED: similar to Protein KIAA1... 71 2e-10
gi|25407348|pir||F85069 hypothetical protein AT4g05540 [imported... 71 2e-10
gi|49092658|ref|XP_407790.1| hypothetical protein AN3653.2 [Aspe... 71 2e-10
gi|24649577|ref|NP_651229.2| CG6204-PA [Drosophila melanogaster]... 71 2e-10
gi|46445015|gb|EAL04286.1| hypothetical protein CaO19.13359 [Can... 71 2e-10
gi|23509024|ref|NP_701692.1| hypothetical protein [Plasmodium fa... 71 2e-10
gi|33086460|gb|AAP92542.1| Ab1-133 [Rattus norvegicus] 71 3e-10
gi|7465203|pir||D64588 probable DNA helicase - Helicobacter pylo... 71 3e-10
gi|46433099|gb|EAK92553.1| hypothetical protein CaO19.702 [Candi... 71 3e-10
gi|50293567|ref|XP_449195.1| unnamed protein product [Candida gl... 71 3e-10
gi|34860727|ref|XP_230878.2| similar to Ab1-133 [Rattus norvegicus] 71 3e-10
gi|39645033|gb|AAH04499.2| MOV10 protein [Homo sapiens] 71 3e-10
gi|14211540|ref|NP_066014.1| Mov10, Moloney leukemia virus 10, h... 71 3e-10
gi|10047339|dbj|BAB13457.1| KIAA1631 protein [Homo sapiens] 71 3e-10
gi|16183177|gb|AAL13650.1| GH20028p [Drosophila melanogaster] 70 4e-10
gi|15240114|ref|NP_198530.1| tRNA-splicing endonuclease positive... 70 5e-10
gi|38638833|gb|AAC48142.2| Hypothetical protein C41D11.7 [Caenor... 70 5e-10
gi|17505965|ref|NP_491374.1| DEAD/DEAH box helicase (1F20) [Caen... 70 5e-10
gi|14590057|ref|NP_142121.1| hypothetical protein PH0109 [Pyroco... 70 5e-10
gi|50309513|ref|XP_454766.1| unnamed protein product [Kluyveromy... 70 5e-10
gi|15827541|ref|NP_301804.1| conserved hypothetical protein [Myc... 70 5e-10
gi|49127739|ref|XP_412808.1| hypothetical protein AN8671.2 [Aspe... 70 6e-10
gi|38346803|emb|CAD41371.2| OSJNBa0088A01.10 [Oryza sativa (japo... 70 6e-10
gi|50399951|gb|AAT76339.1| putative DNA helicase [Oryza sativa (... 70 6e-10
gi|16329815|ref|NP_440543.1| unknown protein [Synechocystis sp. ... 70 6e-10
gi|18395518|ref|NP_565299.1| DNA-binding protein, putative [Arab... 69 8e-10
gi|7446669|pir||T02699 probable helicase At2g03270 [imported] - ... 69 8e-10
gi|11191231|emb|CAC16347.1| putative helicase [Arabidopsis thali... 69 8e-10
gi|28626521|ref|NP_066363.1| KIAA1404 protein [Homo sapiens] >gn... 69 8e-10
gi|10435893|dbj|BAB14696.1| unnamed protein product [Homo sapiens] 69 8e-10
gi|7243189|dbj|BAA92642.1| KIAA1404 protein [Homo sapiens] 69 8e-10
gi|50256678|gb|EAL19401.1| hypothetical protein CNBH0940 [Crypto... 69 1e-09
gi|38108498|gb|EAA54506.1| hypothetical protein MG02491.4 [Magna... 69 1e-09
gi|47209162|emb|CAF90337.1| unnamed protein product [Tetraodon n... 69 1e-09
gi|28828549|gb|AAO51157.1| similar to Neurospora crassa. Related... 69 1e-09
gi|46128545|ref|XP_388826.1| hypothetical protein FG08650.1 [Gib... 69 1e-09
gi|50760387|ref|XP_417999.1| PREDICTED: similar to Potentail hel... 69 1e-09
gi|25404948|pir||C96682 protein F1E22.16 [imported] - Arabidopsi... 68 2e-09
gi|50425695|ref|XP_461444.1| unnamed protein product [Debaryomyc... 68 2e-09
gi|25466295|pir||T52521 related to SEN1 protein [imported] - Neu... 67 3e-09
gi|29349512|ref|NP_813015.1| DNA helicase [Bacteroides thetaiota... 67 4e-09
gi|32417496|ref|XP_329226.1| related to SEN1 protein [MIPS] [Neu... 67 4e-09
gi|15840697|ref|NP_335734.1| hypothetical protein [Mycobacterium... 67 5e-09
gi|19075869|ref|NP_588369.1| putative dna-binding protein [Schiz... 67 5e-09
gi|908917|gb|AAA70430.1| DNA helicase [Homo sapiens] 67 5e-09
gi|15608391|ref|NP_215767.1| hypothetical protein Rv1251c [Mycob... 67 5e-09
gi|15224719|ref|NP_179502.1| tRNA-splicing endonuclease positive... 67 5e-09
gi|2498040|sp|Q60560|SMB2_MESAU DNA-binding protein SMUBP-2 (Imm... 67 5e-09
gi|50423331|ref|XP_460248.1| unnamed protein product [Debaryomyc... 66 7e-09
gi|39595360|emb|CAE60397.1| Hypothetical protein CBG03999 [Caeno... 66 7e-09
gi|39594138|emb|CAE70248.1| Hypothetical protein CBG16740 [Caeno... 66 7e-09
gi|46440489|gb|EAK99794.1| hypothetical protein CaO19.13579 [Can... 66 9e-09
gi|46110813|ref|XP_382464.1| hypothetical protein FG02288.1 [Gib... 66 9e-09
gi|20270921|gb|AAM18477.1| VHSV-induced protein [Oncorhynchus my... 65 1e-08
gi|41408631|ref|NP_961467.1| hypothetical protein MAP2533 [Mycob... 65 1e-08
gi|48891775|ref|ZP_00325241.1| COG1112: Superfamily I DNA and RN... 65 1e-08
gi|45509666|ref|ZP_00161999.1| COG1112: Superfamily I DNA and RN... 65 1e-08
gi|15790999|ref|NP_280823.1| DNA binding protein eukaryotic-like... 65 2e-08
gi|49111123|ref|XP_411789.1| hypothetical protein AN7652.2 [Aspe... 65 2e-08
gi|4504623|ref|NP_002171.1| immunoglobulin mu binding protein 2;... 65 2e-08
gi|1082534|pir||A47500 Ig mu chain switch region binding protein... 65 2e-08
gi|15234617|ref|NP_194739.1| tRNA-splicing endonuclease positive... 65 2e-08
gi|46913207|emb|CAG19995.1| hypothetical protein [Photobacterium... 64 3e-08
gi|45185590|ref|NP_983306.1| ACL098Cp [Eremothecium gossypii] >g... 64 3e-08
gi|13928794|ref|NP_113774.1| immunoglobulin mu binding protein 2... 64 3e-08
gi|47222854|emb|CAF96521.1| unnamed protein product [Tetraodon n... 64 5e-08
gi|31979229|gb|AAP60176.1| cardiac specific isoform of Mov10 lik... 64 5e-08
gi|13994127|ref|NP_112550.1| Moloney leukemia virus 10-like 1 [M... 64 5e-08
gi|26351285|dbj|BAC39279.1| unnamed protein product [Mus musculus] 64 5e-08
gi|15004351|gb|AAK77049.1| cardiac-specific RNA helicase [Mus mu... 64 5e-08
gi|23508274|ref|NP_700943.1| hypothetical protein [Plasmodium fa... 63 6e-08
gi|49077606|ref|XP_402643.1| hypothetical protein UM05028.1 [Ust... 63 8e-08
gi|48834207|ref|ZP_00291222.1| COG1112: Superfamily I DNA and RN... 63 8e-08
gi|15218803|ref|NP_176754.1| tRNA-splicing endonuclease positive... 62 1e-07
gi|25404947|pir||B96682 protein F1E22.14 [imported] - Arabidopsi... 62 1e-07
gi|34557480|ref|NP_907295.1| ATP-BINDING PROTEIN [Wolinella succ... 62 1e-07
gi|6321958|ref|NP_012034.1| Essential tripartite DNA replication... 62 2e-07
gi|38101942|gb|EAA48840.1| hypothetical protein MG00498.4 [Magna... 62 2e-07
gi|48831471|ref|ZP_00288534.1| COG1112: Superfamily I DNA and RN... 61 2e-07
gi|48853892|ref|ZP_00308057.1| COG1112: Superfamily I DNA and RN... 61 2e-07
gi|34877805|ref|XP_224732.2| similar to regulator of nonsense tr... 61 3e-07
gi|39589134|emb|CAE57867.1| Hypothetical protein CBG00906 [Caeno... 60 4e-07
gi|50293759|ref|XP_449291.1| unnamed protein product [Candida gl... 60 4e-07
gi|32492200|emb|CAE03468.1| OSJNBa0083N12.5 [Oryza sativa (japon... 60 5e-07
gi|28830027|gb|AAO52517.1| similar to Homo sapiens (Human). Prot... 60 5e-07
gi|23482362|gb|EAA18365.1| hypothetical protein [Plasmodium yoel... 60 5e-07
gi|32407005|ref|XP_324106.1| hypothetical protein [Neurospora cr... 60 7e-07
gi|40882306|emb|CAF06129.1| related to DNA helicase [Neurospora ... 60 7e-07
gi|42490896|gb|AAH66215.1| Ighmbp2 protein [Mus musculus] 59 8e-07
gi|41053136|dbj|BAD08079.1| putative DNA helicase [Oryza sativa ... 59 8e-07
gi|33592453|ref|NP_880097.1| conserved hypothetical protein [Bor... 59 8e-07
gi|31215066|ref|XP_315956.1| ENSANGP00000013515 [Anopheles gambi... 59 1e-06
gi|33601805|ref|NP_889365.1| conserved hypothetical protein [Bor... 59 1e-06
gi|19173651|ref|NP_597454.1| similarity to HYPOTHETICAL ZINC FIN... 59 1e-06
gi|46124979|ref|XP_387043.1| hypothetical protein FG06867.1 [Gib... 59 1e-06
gi|33597255|ref|NP_884898.1| conserved hypothetical protein [Bor... 59 1e-06
gi|50758833|ref|XP_417438.1| PREDICTED: similar to PPAR-alpha in... 58 2e-06
gi|47156225|gb|AAT12000.1| armitage [Drosophila melanogaster] 58 2e-06
gi|50400310|sp|Q6J5K9|ARMI_DROME Probable RNA helicase armi (Arm... 58 2e-06
gi|50257775|gb|EAL20476.1| hypothetical protein CNBE3970 [Crypto... 58 2e-06
gi|6678029|ref|NP_033238.1| immunoglobulin mu binding protein 2;... 58 2e-06
gi|24656854|ref|NP_647816.1| CG11513-PA [Drosophila melanogaster... 58 2e-06
gi|19075911|ref|NP_588411.1| hypothetical protein [Schizosacchar... 57 3e-06
gi|34861034|ref|XP_230961.2| similar to Peroxisomal proliferator... 57 3e-06
gi|48835984|ref|ZP_00292982.1| COG1112: Superfamily I DNA and RN... 57 4e-06
gi|22972152|ref|ZP_00019048.1| hypothetical protein [Chloroflexu... 57 4e-06
gi|13904994|gb|AAH06779.1| BC006779 protein [Mus musculus] 57 4e-06
gi|46913216|emb|CAG20004.1| hypothetical protein [Photobacterium... 57 6e-06
gi|1177024|sp|P42694|HELZ_HUMAN Potential helicase with zinc-fin... 56 7e-06
gi|42661228|ref|XP_375485.1| helicase with zinc finger domain [H... 56 7e-06
gi|40789061|dbj|BAA06147.2| KIAA0054 [Homo sapiens] 56 7e-06
gi|50747618|ref|XP_420931.1| PREDICTED: similar to DNA helicase ... 56 9e-06
gi|20804231|emb|CAD31257.1| PUTATIVE HELICASE PROTEIN ATP-BINDIN... 56 9e-06
gi|50355943|ref|NP_938040.1| helicase with zinc finger domain [M... 55 1e-05
gi|50757855|ref|XP_415679.1| PREDICTED: similar to Potential hel... 55 1e-05
gi|34874109|ref|XP_237808.2| similar to mKIAA0054 protein [Rattu... 55 1e-05
gi|15644163|ref|NP_229212.1| helicase-related protein [Thermotog... 55 1e-05
gi|26006099|dbj|BAC41393.1| mKIAA0054 protein [Mus musculus] 55 1e-05
gi|49068896|ref|XP_398737.1| hypothetical protein UM01122.1 [Ust... 55 2e-05
gi|46111837|ref|XP_382976.1| hypothetical protein FG02800.1 [Gib... 55 2e-05
gi|23015891|ref|ZP_00055655.1| COG1112: Superfamily I DNA and RN... 55 2e-05
gi|46227554|gb|EAK88489.1| sen1p/ NAM7 like superfamily I RNA he... 55 2e-05
gi|24640930|ref|NP_572597.1| CG2990-PA [Drosophila melanogaster]... 55 2e-05
gi|47196036|emb|CAF89197.1| unnamed protein product [Tetraodon n... 55 2e-05
gi|24640932|ref|NP_727386.1| CG2990-PB [Drosophila melanogaster]... 55 2e-05
gi|49235000|ref|ZP_00329078.1| COG1112: Superfamily I DNA and RN... 55 2e-05
gi|11359044|pir||T47242 DNA helicase homolog - fission yeast (Sc... 54 3e-05
gi|26328823|dbj|BAC28150.1| unnamed protein product [Mus musculus] 54 3e-05
gi|50252651|dbj|BAD28821.1| DNA helicase-like [Oryza sativa (jap... 54 3e-05
gi|30089668|gb|AAP20828.1| LD18775p [Drosophila melanogaster] 54 4e-05
gi|18676690|dbj|BAB84997.1| FLJ00244 protein [Homo sapiens] 54 5e-05
gi|30316116|sp|Q9BYK8|P285_HUMAN Peroxisomal proliferator-activa... 54 5e-05
gi|33086800|gb|AAP92673.1| replicase polyprotein 1ab [Avian infe... 54 5e-05
gi|49105976|ref|XP_411383.1| hypothetical protein AN7246.2 [Aspe... 54 5e-05
gi|14133261|dbj|BAB21860.2| KIAA1769 protein [Homo sapiens] 54 5e-05
gi|16550383|dbj|BAB70969.1| unnamed protein product [Homo sapiens] 54 5e-05
gi|21668026|gb|AAM74197.1| peroxisomal proliferator-activated re... 54 5e-05
gi|34335260|ref|NP_208384.2| PPAR-alpha interacting complex prot... 54 5e-05
gi|17505963|ref|NP_491376.1| putative cytoplasmic protein family... 53 6e-05
gi|47086099|ref|NP_998431.1| zgc:77407 [Danio rerio] >gnl|BL_ORD... 53 6e-05
gi|47223949|emb|CAG06126.1| unnamed protein product [Tetraodon n... 53 6e-05
gi|28829358|gb|AAO51900.1| similar to hypothetical protein; prot... 53 6e-05
gi|50543164|ref|XP_499748.1| hypothetical protein [Yarrowia lipo... 53 8e-05
gi|17538027|ref|NP_495964.1| NF-X1 type zinc finger containing p... 52 1e-04
gi|31216799|ref|XP_316302.1| ENSANGP00000020616 [Anopheles gambi... 52 1e-04
gi|10434562|dbj|BAB14299.1| unnamed protein product [Homo sapiens] 52 1e-04
gi|33240057|ref|NP_874999.1| Superfamily I DNA/RNA helicase [Pro... 52 1e-04
gi|41324069|gb|AAS00078.1| 1ab [Avian infectious bronchitis virus] 52 1e-04
gi|29150104|emb|CAD79665.1| conserved hypothetical protein [Neur... 52 1e-04
gi|50082762|gb|AAT70073.1| replicase polyprotein 1ab [Avian infe... 52 1e-04
gi|74826|pir||VFIHB2 genome polyprotein - avian infectious bronc... 52 2e-04
gi|38372862|sp|Q91QT2|R1AB_IBVBC Replicase polyprotein 1ab (pp1a... 52 2e-04
gi|14149033|emb|CAC39112.1| replicase polyprotein 1ab [Avian inf... 52 2e-04
gi|10242469|ref|NP_066134.1| ORF1ab polyprotein; frameshift prod... 52 2e-04
gi|458735|emb|CAA83018.1| potential chimeric protein [Avian infe... 52 2e-04
gi|25121554|ref|NP_740630.1| coronavirus nsp10; metal-binding NT... 52 2e-04
gi|33569221|gb|AAQ21583.1| 1ab polyprotein [Avian infectious bro... 51 2e-04
gi|15898288|ref|NP_342893.1| Hypothetical protein SSO1456 [Sulfo... 51 2e-04
gi|37360018|dbj|BAC97987.1| mKIAA0625 protein [Mus musculus] 51 3e-04
gi|38346801|emb|CAD41369.2| OSJNBa0088A01.8 [Oryza sativa (japon... 51 3e-04
gi|48108660|ref|XP_396207.1| similar to ENSANGP00000013515 [Apis... 50 4e-04
gi|50235230|gb|AAT70770.1| replicase polyprotein 1ab [Avian infe... 50 4e-04
gi|37522518|ref|NP_925895.1| hypothetical protein glr2949 [Gloeo... 50 5e-04
gi|33440452|gb|AAQ19138.1| putative UvrD/REP helicase-like prote... 50 5e-04
gi|30851520|gb|AAH52532.1| BC006779 protein [Mus musculus] 50 7e-04
gi|23482739|gb|EAA18631.1| hypothetical protein [Plasmodium yoel... 50 7e-04
gi|18976457|ref|NP_577814.1| putative DNA helicase [Pyrococcus f... 50 7e-04
gi|39793966|gb|AAH63664.1| DNA2L protein [Homo sapiens] 50 7e-04
gi|48096078|ref|XP_394597.1| similar to CG9425-PB [Apis mellifera] 49 9e-04
gi|183250|gb|AAA58611.1| glial factor-1 49 9e-04
gi|30692868|ref|NP_198446.3| DNA-binding protein, putative [Arab... 49 0.001
gi|9758800|dbj|BAB09253.1| DNA helicase-like [Arabidopsis thaliana] 49 0.001
gi|31196635|ref|XP_307265.1| ENSANGP00000002028 [Anopheles gambi... 48 0.003
gi|15800723|ref|NP_286737.1| Z1202 gene product [Escherichia col... 48 0.003
gi|15830638|ref|NP_309411.1| hypothetical protein ECs1384 [Esche... 48 0.003
gi|32422215|ref|XP_331551.1| hypothetical protein [Neurospora cr... 48 0.003
gi|8843991|gb|AAF80211.1| Cag-omega [Helicobacter pylori] 48 0.003
gi|4680603|gb|AAD27693.1| urease-enhancing factor helB [Helicoba... 47 0.003
gi|46128539|ref|XP_388823.1| hypothetical protein FG08647.1 [Gib... 47 0.004
gi|23486176|gb|EAA20740.1| DNA replication helicase DNA2. [Plasm... 47 0.006
gi|24375506|ref|NP_719549.1| hypothetical protein SO4019 [Shewan... 46 0.007
gi|32410471|ref|XP_325716.1| hypothetical protein [Neurospora cr... 46 0.007
gi|46091494|dbj|BAD13936.1| cag pathogenicity island protein [He... 46 0.010
gi|47224394|emb|CAG08644.1| unnamed protein product [Tetraodon n... 45 0.013
gi|28199313|ref|NP_779627.1| DNA helicase [Xylella fastidiosa Te... 45 0.017
gi|46110497|ref|XP_382306.1| hypothetical protein FG02130.1 [Gib... 45 0.022
gi|38091913|ref|XP_126554.5| RIKEN cDNA 9630002H22 [Mus musculus] 45 0.022
gi|32412003|ref|XP_326482.1| hypothetical protein [Neurospora cr... 44 0.028
gi|31202035|ref|XP_309965.1| ENSANGP00000015391 [Anopheles gambi... 44 0.028
gi|19173301|ref|NP_597104.1| DNA REPLICATION HELICASE [Encephali... 44 0.028
gi|23619280|ref|NP_705242.1| hypothetical protein [Plasmodium fa... 44 0.048
gi|23954221|emb|CAD42018.1| hypothetical protein [Escherichia coli] 43 0.063
gi|15839000|ref|NP_299688.1| conserved hypothetical protein [Xyl... 43 0.063
gi|46562170|ref|YP_009125.1| conserved hypothetical protein [Des... 43 0.082
gi|23478836|gb|EAA15816.1| Sen1p [Plasmodium yoelii yoelii] 43 0.082
gi|23490633|gb|EAA22364.1| SEN1-related [Plasmodium yoelii yoelii] 43 0.082
gi|22996680|ref|ZP_00040927.1| COG1112: Superfamily I DNA and RN... 42 0.11
gi|16767733|ref|NP_463348.1| putative DNA helicases [Salmonella ... 42 0.14
gi|45553113|ref|NP_996084.1| CG9425-PB [Drosophila melanogaster]... 42 0.18
gi|2641128|gb|AAB86818.1| RNA-directed RNA polymerase [murine he... 42 0.18
gi|21232563|ref|NP_638480.1| DNA helicase related protein [Xanth... 42 0.18
gi|25121570|ref|NP_740617.1| coronavirus nsp10 (MB, NTPase/HEL) ... 42 0.18
gi|26007546|ref|NP_068668.2| ORF1ab polyprotein [Murine hepatiti... 42 0.18
gi|37999877|sp|P16342|R1AB_CVMA5 Replicase polyprotein 1ab (pp1a... 41 0.24
gi|93916|pir||S15760 genome polyprotein - murine hepatitis virus... 41 0.24
gi|4377413|emb|CAA36202.1| unnamed protein product [Murine hepat... 41 0.24
gi|7769353|gb|AAF69342.1| RNA-directed RNA polymerase [murine he... 41 0.24
gi|18676696|dbj|BAB85000.1| FLJ00247 protein [Homo sapiens] 41 0.24
gi|24114229|ref|NP_708739.1| putative superfamily I DNA helicase... 40 0.41
gi|50470808|emb|CAB60444.3| Hypothetical protein Y80D3A.2 [Caeno... 40 0.41
gi|49103428|ref|XP_411151.1| hypothetical protein AN7014.2 [Aspe... 40 0.41
gi|12643206|gb|AAK00458.1| unknown [Shigella flexneri 2a] 40 0.41
gi|32566895|ref|NP_507684.2| putative protein, with 2 coiled coi... 40 0.41
gi|38346802|emb|CAD41370.2| OSJNBa0088A01.9 [Oryza sativa (japon... 40 0.53
gi|29837505|ref|NP_828870.1| nsp13-pp1ab (ZD, NTPase/HEL) [SARS ... 40 0.53
gi|40457449|gb|AAR86774.1| orf1ab [SARS coronavirus ShanghaiQXC2] 40 0.53
gi|40548922|gb|AAR87543.1| putative polyprotein [SARS coronaviru... 40 0.53
gi|40548970|gb|AAR87587.1| putative polyprotein [SARS coronaviru... 40 0.53
gi|30124074|ref|NP_828849.2| orf1ab polyprotein (pp1ab) [SARS co... 40 0.53
gi|38231938|gb|AAR14810.1| putative orf1ab polyprotein [SARS cor... 40 0.53
gi|40557708|gb|AAP82978.2| orf1ab [SARS coronavirus ShanghaiQXC1] 40 0.53
gi|40548910|gb|AAR87532.1| putative polyprotein [SARS coronaviru... 40 0.53
gi|30027621|gb|AAP13442.1| nonstructural polyprotein pp1ab [SARS... 40 0.53
gi|38505492|gb|AAR23251.1| orf1ab polyprotein [SARS coronavirus ... 40 0.53
gi|50365701|gb|AAT76146.1| replicase 1ab [SARS coronavirus TJF] 40 0.53
gi|40795745|gb|AAR91584.1| nonstructural polyprotein [SARS coron... 40 0.53
gi|30023953|gb|AAP13566.1| putative orf1ab polyprotein [SARS cor... 40 0.53
gi|40548982|gb|AAR87598.1| putative polyprotein [SARS coronaviru... 40 0.53
gi|38231928|gb|AAR14802.1| putative orf1ab polyprotein [SARS cor... 40 0.53
gi|30795144|gb|AAP41036.1| replicase 1AB [SARS coronavirus Tor2] 40 0.53
gi|41323720|gb|AAS00002.1| nonstructural polyprotein [SARS coron... 40 0.53
gi|30275667|gb|AAP30028.1| orf1ab [SARS coronavirus BJ01] 40 0.53
gi|40548886|gb|AAR87510.1| putative polyprotein [SARS coronaviru... 40 0.53
gi|31581504|gb|AAP33696.1| polyprotein 1ab [SARS coronavirus Fra... 40 0.53
gi|33114215|gb|AAP94757.1| putative orf1ab polyprotein [SARS cor... 40 0.53
gi|38505483|gb|AAR23243.1| orf1ab polyprotein [SARS coronavirus ... 40 0.53
gi|31416293|gb|AAP51225.1| orf1ab [SARS coronavirus GD01] 40 0.53
gi|30027619|gb|AAP13440.1| nonstructural polyprotein [SARS coron... 40 0.53
gi|7769342|gb|AAF69332.1| RNA-directed RNA polymerase [murine he... 40 0.70
gi|49522892|gb|AAH75105.1| Unknown (protein for MGC:79646) [Xeno... 40 0.70
gi|17529672|gb|AAL40397.1| RNA polymerase 1b [bovine coronavirus] 40 0.70
gi|37999876|sp|Q9PYA3|R1AB_CVM2 Replicase polyprotein 1ab (pp1ab... 40 0.70
gi|48832193|ref|ZP_00289234.1| COG1112: Superfamily I DNA and RN... 40 0.70
gi|6625761|gb|AAF19384.1| RNA-directed RNA polymerase [murine he... 40 0.70
gi|2558947|gb|AAB81615.1| ParC [Bacillus subtilis] 40 0.70
gi|16078871|ref|NP_389692.1| subunit of DNA topoisomerase IV [Ba... 40 0.70
gi|38372858|sp|Q8V6W7|R1AB_CVBQ Replicase polyprotein 1ab (pp1ab... 40 0.70
gi|38372857|sp|Q66198|R1AB_CVBM Replicase polyprotein 1ab (pp1ab... 40 0.70
gi|29247445|gb|EAA39007.1| GLP_542_32520_28105 [Giardia lamblia ... 39 0.91
gi|16132129|ref|NP_418728.1| putative frameshift suppressor; KpL... 39 0.91
gi|42741329|gb|AAS44814.1| replicase 1B [SARS coronavirus TW-HP1... 39 0.91
gi|48765582|ref|ZP_00270132.1| COG1112: Superfamily I DNA and RN... 39 1.2
gi|23619449|ref|NP_705411.1| hypothetical protein, conserved [Pl... 39 1.2
gi|39587400|emb|CAE75054.1| Hypothetical protein CBG22968 [Caeno... 39 1.2
gi|26008091|ref|NP_742139.1| coronavirus nsp10 (MB, NTPase/HEL);... 39 1.6
gi|21674440|ref|NP_662505.1| DNA helicase, putative [Chlorobium ... 39 1.6
gi|48854113|ref|ZP_00308277.1| COG1112: Superfamily I DNA and RN... 39 1.6
gi|41352890|gb|AAS01059.1| orf1ab polyprotein [SARS coronavirus ... 39 1.6
gi|38018023|ref|NP_937947.1| replicase polyprotein [Human corona... 39 1.6
gi|18033972|gb|AAL57305.1| replicase [bovine coronavirus] 39 1.6
gi|38372859|sp|Q8V439|R1AB_CVBLU Replicase polyprotein 1ab (pp1a... 39 1.6
gi|15077820|gb|AAK83365.1| replicase [bovine coronavirus] 39 1.6
gi|26008080|ref|NP_150073.2| orf1ab polyprotein [Bovine coronavi... 39 1.6
gi|32423223|ref|XP_332049.1| hypothetical protein [Neurospora cr... 38 2.0
gi|23485591|gb|EAA20484.1| hypothetical protein [Plasmodium yoel... 38 2.6
gi|24372169|ref|NP_716211.1| PhoH family protein [Shewanella one... 38 2.6
gi|50549477|ref|XP_502209.1| hypothetical protein [Yarrowia lipo... 38 2.6
gi|42560748|ref|NP_975199.1| hypothetical protein MSC_0196 [Myco... 37 3.5
gi|34762953|ref|ZP_00143932.1| Superfamily I DNA helicase [Fusob... 37 3.5
gi|38324306|gb|AAP49011.4| orf1ab polyprotein [SARS coronavirus ... 37 3.5
gi|24664327|ref|NP_648725.1| CG9425-PA [Drosophila melanogaster]... 37 3.5
gi|47221715|emb|CAG10187.1| unnamed protein product [Tetraodon n... 37 4.5
gi|5748807|gb|AAA85160.2| syringomycin biosynthesis enzyme 1 [Ps... 37 5.9
gi|23468399|ref|ZP_00123734.1| COG1020: Non-ribosomal peptide sy... 37 5.9
gi|23488577|gb|EAA21354.1| hypothetical protein [Plasmodium yoel... 37 5.9
gi|46912047|emb|CAG18842.1| conserved hypothetical protein [Phot... 37 5.9
gi|28377747|ref|NP_784639.1| unknown [Lactobacillus plantarum WC... 37 5.9
gi|15896287|ref|NP_349636.1| Superfamily I DNA helicase [Clostri... 36 7.7
gi|23618962|ref|NP_704924.1| hypothetical protein [Plasmodium fa... 36 7.7
gi|23509939|ref|NP_702606.1| hypothetical protein [Plasmodium fa... 36 7.7
gi|15669714|ref|NP_248527.1| exodeoxyribonuclease V (recD) [Meth... 36 7.7
gi|38110748|gb|EAA56424.1| hypothetical protein MG06395.4 [Magna... 36 7.7
gi|50406558|ref|XP_456644.1| unnamed protein product [Debaryomyc... 31 7.8
>gi|17531515|ref|NP_496142.1| regulator of nonsense transcripts family
member (2K219) [Caenorhabditis elegans]
gi|2498041|sp|Q09449|YQ12_CAEEL HYPOTHETICAL 175.7 KD PROTEIN
C05C10.2 IN CHROMOSOME II
gi|7495408|pir||T18941 hypothetical protein C05C10.2 - Caenorhabditis
elegans
gi|3874068|emb|CAA88201.1| Hypothetical protein C05C10.2a
[Caenorhabditis elegans]
Length = 1551
Score = 3068 bits (7955), Expect = 0.0
Identities = 1518/1551 (97%), Positives = 1518/1551 (97%)
Frame = +1
Query: 1 MRKIGEFLKYVQFFSSAKFSRNNLLKPENSFPPTHFDTWERLSDYQKPSSSTTDDAYGKP 180
MRKIGEFLKYVQFFSSAKFSRNNLLKPENSFPPTHFDTWERLSDYQKPSSSTTDDAYGKP
Sbjct: 1 MRKIGEFLKYVQFFSSAKFSRNNLLKPENSFPPTHFDTWERLSDYQKPSSSTTDDAYGKP 60
Query: 181 VAKISPTASIDERETGIIGSTLRQXXXXXXXXXXXNMNPYDRLDKEVISKKNAHTNSYRN 360
VAKISPTASIDERETGIIGSTLRQ NMNPYDRLDKEVISKKNAHTNSYRN
Sbjct: 61 VAKISPTASIDERETGIIGSTLRQDSTDSDSTGSSNMNPYDRLDKEVISKKNAHTNSYRN 120
Query: 361 DVDELEGSLRTLGLQKVNAPTIXXXXXXXXXXXXXXXXXXXXXXKIVKAEIKAPQQPMSL 540
DVDELEGSLRTLGLQKVNAPTI KIVKAEIKAPQQPMSL
Sbjct: 121 DVDELEGSLRTLGLQKVNAPTISSFSAWKSQSSALPAPSSSETSKIVKAEIKAPQQPMSL 180
Query: 541 VYPESEYSILVFVFQNPNYFDVMREMEKSMNIFTKLFRGSQIRNKNDLPSGRHLVNYRQN 720
VYPESEYSILVFVFQNPNYFDVMREMEKSMNIFTKLFRGSQIRNKNDLPSGRHLVNYRQN
Sbjct: 181 VYPESEYSILVFVFQNPNYFDVMREMEKSMNIFTKLFRGSQIRNKNDLPSGRHLVNYRQN 240
Query: 721 HAFDFAAMSHIWKENKMENLPKLPHRANLVMTLPSSRVRNSKICAFYRVLEKKEDKYILV 900
HAFDFAAMSHIWKENKMENLPKLPHRANLVMTLPSSRVRNSKICAFYRVLEKKEDKYILV
Sbjct: 241 HAFDFAAMSHIWKENKMENLPKLPHRANLVMTLPSSRVRNSKICAFYRVLEKKEDKYILV 300
Query: 901 ACHVNIHGFHRGDLRFVEVNNRTVLKGFERSSVIGHLFLGDILTVTELTRCNETVSNVAS 1080
ACHVNIHGFHRGDLRFVEVNNRTVLKGFERSSVIGHLFLGDILTVTELTRCNETVSNVAS
Sbjct: 301 ACHVNIHGFHRGDLRFVEVNNRTVLKGFERSSVIGHLFLGDILTVTELTRCNETVSNVAS 360
Query: 1081 SVEDASPDAPCQWMASKVVLFPRHEPVNVQFKFTCNGMASVVSTNEPMSVILNNLTEAKT 1260
SVEDASPDAPCQWMASKVVLFPRHEPVNVQFKFTCNGMASVVSTNEPMSVILNNLTEAKT
Sbjct: 361 SVEDASPDAPCQWMASKVVLFPRHEPVNVQFKFTCNGMASVVSTNEPMSVILNNLTEAKT 420
Query: 1261 NVEYTGIAFKSASYTVHTEDYTKKWYERIQEEISNIMIYPKALSTIYQYEEYTPNFVVEK 1440
NVEYTGIAFKSASYTVHTEDYTKKWYERIQEEISNIMIYPKALSTIYQYEEYTPNFVVEK
Sbjct: 421 NVEYTGIAFKSASYTVHTEDYTKKWYERIQEEISNIMIYPKALSTIYQYEEYTPNFVVEK 480
Query: 1441 QEQEEHPYQQDLEDLDLYRQHEMQTNVFTKFFDIGKSEKRKFGPGKSISNCRHSDAIDFA 1620
QEQEEHPYQQDLEDLDLYRQHEMQTNVFTKFFDIGKSEKRKFGPGKSISNCRHSDAIDFA
Sbjct: 481 QEQEEHPYQQDLEDLDLYRQHEMQTNVFTKFFDIGKSEKRKFGPGKSISNCRHSDAIDFA 540
Query: 1621 AMSYIWKNIRQQHLPKLPKLPNMVLPLPTSMPLDSEICAFYRVLVENKSKYILIACHMNV 1800
AMSYIWKNIRQQHLPKLPKLPNMVLPLPTSMPLDSEICAFYRVLVENKSKYILIACHMNV
Sbjct: 541 AMSYIWKNIRQQHLPKLPKLPNMVLPLPTSMPLDSEICAFYRVLVENKSKYILIACHMNV 600
Query: 1801 HGYHRGDLRFLEINESTKLYGFEGRSVIGQLFLGDIVAVTELARCNGHGSDAFKIPFDVS 1980
HGYHRGDLRFLEINESTKLYGFEGRSVIGQLFLGDIVAVTELARCNGHGSDAFKIPFDVS
Sbjct: 601 HGYHRGDLRFLEINESTKLYGFEGRSVIGQLFLGDIVAVTELARCNGHGSDAFKIPFDVS 660
Query: 1981 MSSQNTCTWMASKITLPSRPPPASVLFSFMKNRMAVVKGCDEPMNVEVKSIQNVEPDLIY 2160
MSSQNTCTWMASKITLPSRPPPASVLFSFMKNRMAVVKGCDEPMNVEVKSIQNVEPDLIY
Sbjct: 661 MSSQNTCTWMASKITLPSRPPPASVLFSFMKNRMAVVKGCDEPMNVEVKSIQNVEPDLIY 720
Query: 2161 KGTAFKPEKPELNFTEGFIKKKRHQIGSITLRIASYPNSFGTIYNFQESDIDNEHYKIGI 2340
KGTAFKPEKPELNFTEGFIKKKRHQIGSITLRIASYPNSFGTIYNFQESDIDNEHYKIGI
Sbjct: 721 KGTAFKPEKPELNFTEGFIKKKRHQIGSITLRIASYPNSFGTIYNFQESDIDNEHYKIGI 780
Query: 2341 NAFSEEKFTEISLDEREKIVETCSLMGFSAANTIFNGRFDCRAFKMEEIKKNGMTVMFCI 2520
NAFSEEKFTEISLDEREKIVETCSLMGFSAANTIFNGRFDCRAFKMEEIKKNGMTVMFCI
Sbjct: 781 NAFSEEKFTEISLDEREKIVETCSLMGFSAANTIFNGRFDCRAFKMEEIKKNGMTVMFCI 840
Query: 2521 ENPTSQPTLGLWCAGNRIVIGGPNGDVNGAIETVIDDPDIGYLRIAARLSRDIPKKFSFK 2700
ENPTSQPTLGLWCAGNRIVIGGPNGDVNGAIETVIDDPDIGYLRIAARLSRDIPKKFSFK
Sbjct: 841 ENPTSQPTLGLWCAGNRIVIGGPNGDVNGAIETVIDDPDIGYLRIAARLSRDIPKKFSFK 900
Query: 2701 GDGEFFVSQREVFENEILDDGYFKTLDPGCNGRRIIETLYGGKPLERVVVDKRDSSIERM 2880
GDGEFFVSQREVFENEILDDGYFKTLDPGCNGRRIIETLYGGKPLERVVVDKRDSSIERM
Sbjct: 901 GDGEFFVSQREVFENEILDDGYFKTLDPGCNGRRIIETLYGGKPLERVVVDKRDSSIERM 960
Query: 2881 MSQLFGVGSGISEHKTSGKKSEDTPTQFYFPSTPEPLALNKYQCEYVQMLLDGNPLIIGS 3060
MSQLFGVGSGISEHKTSGKKSEDTPTQFYFPSTPEPLALNKYQCEYVQMLLDGNPLIIGS
Sbjct: 961 MSQLFGVGSGISEHKTSGKKSEDTPTQFYFPSTPEPLALNKYQCEYVQMLLDGNPLIIGS 1020
Query: 3061 SPFGCGKSMTIITAALELYKLKKNRKQLLITQSNYASVNLIDIAQRVCLSGDDDLKDLKF 3240
SPFGCGKSMTIITAALELYKLKKNRKQLLITQSNYASVNLIDIAQRVCLSGDDDLKDLKF
Sbjct: 1021 SPFGCGKSMTIITAALELYKLKKNRKQLLITQSNYASVNLIDIAQRVCLSGDDDLKDLKF 1080
Query: 3241 VRFVSEKNWNELPSNCRTDSDMPYLMNKLFKDWAMGRIDLTNLTCLKTHHYVQMVSHIIK 3420
VRFVSEKNWNELPSNCRTDSDMPYLMNKLFKDWAMGRIDLTNLTCLKTHHYVQMVSHIIK
Sbjct: 1081 VRFVSEKNWNELPSNCRTDSDMPYLMNKLFKDWAMGRIDLTNLTCLKTHHYVQMVSHIIK 1140
Query: 3421 NDLVNPMLFGDHIAQIYDKLSADFSRAPHAQTLVEAFFMIYKPDLVMVTADSAKGLLNIL 3600
NDLVNPMLFGDHIAQIYDKLSADFSRAPHAQTLVEAFFMIYKPDLVMVTADSAKGLLNIL
Sbjct: 1141 NDLVNPMLFGDHIAQIYDKLSADFSRAPHAQTLVEAFFMIYKPDLVMVTADSAKGLLNIL 1200
Query: 3601 RDVCAVQIDEASQLAECTLLGLLKSFNNASFGLIGDIHQLPPYCEEGLEGKLKDFGIGNT 3780
RDVCAVQIDEASQLAECTLLGLLKSFNNASFGLIGDIHQLPPYCEEGLEGKLKDFGIGNT
Sbjct: 1201 RDVCAVQIDEASQLAECTLLGLLKSFNNASFGLIGDIHQLPPYCEEGLEGKLKDFGIGNT 1260
Query: 3781 MERAIKEKMFPVCTLRNVYRCHPKTTELLSELFYDGALVSGVSELARSDFMTKRDDFWPN 3960
MERAIKEKMFPVCTLRNVYRCHPKTTELLSELFYDGALVSGVSELARSDFMTKRDDFWPN
Sbjct: 1261 MERAIKEKMFPVCTLRNVYRCHPKTTELLSELFYDGALVSGVSELARSDFMTKRDDFWPN 1320
Query: 3961 PKFPMMFVNNTGASTKMGTSTSNSSEKSIVGEIVQNLINDPRNPVNPSDIGVISFYSAQT 4140
PKFPMMFVNNTGASTKMGTSTSNSSEKSIVGEIVQNLINDPRNPVNPSDIGVISFYSAQT
Sbjct: 1321 PKFPMMFVNNTGASTKMGTSTSNSSEKSIVGEIVQNLINDPRNPVNPSDIGVISFYSAQT 1380
Query: 4141 SILTEHLRGSGVKCGTVDAFQGSEKEIIIMCSTNERISDFMQLSNRLNVAMSRAKQVTII 4320
SILTEHLRGSGVKCGTVDAFQGSEKEIIIMCSTNERISDFMQLSNRLNVAMSRAKQVTII
Sbjct: 1381 SILTEHLRGSGVKCGTVDAFQGSEKEIIIMCSTNERISDFMQLSNRLNVAMSRAKQVTII 1440
Query: 4321 IGHLDGLRRANYWSTIVNKIEQNGNLVNANDWYQNQRRNKVSLSSYPLISTSRQSKQQRA 4500
IGHLDGLRRANYWSTIVNKIEQNGNLVNANDWYQNQRRNKVSLSSYPLISTSRQSKQQRA
Sbjct: 1441 IGHLDGLRRANYWSTIVNKIEQNGNLVNANDWYQNQRRNKVSLSSYPLISTSRQSKQQRA 1500
Query: 4501 NEYNSQHKHVKRQSNNDYGSQRSVTNSLNPEFVGKWDDETYGDWPTIQKST 4653
NEYNSQHKHVKRQSNNDYGSQRSVTNSLNPEFVGKWDDETYGDWPTIQKST
Sbjct: 1501 NEYNSQHKHVKRQSNNDYGSQRSVTNSLNPEFVGKWDDETYGDWPTIQKST 1551
>gi|17531513|ref|NP_496141.1| regulator of nonsense transcripts family
member (2K219) [Caenorhabditis elegans]
gi|14530347|emb|CAC42246.1| Hypothetical protein C05C10.2b
[Caenorhabditis elegans]
Length = 1553
Score = 3063 bits (7942), Expect = 0.0
Identities = 1518/1553 (97%), Positives = 1518/1553 (97%), Gaps = 2/1553 (0%)
Frame = +1
Query: 1 MRKIGEFLKYVQFFSSAKFSRNNLLKPENSFPPTHFDTWERLSDYQKPSSSTTDDAYGKP 180
MRKIGEFLKYVQFFSSAKFSRNNLLKPENSFPPTHFDTWERLSDYQKPSSSTTDDAYGKP
Sbjct: 1 MRKIGEFLKYVQFFSSAKFSRNNLLKPENSFPPTHFDTWERLSDYQKPSSSTTDDAYGKP 60
Query: 181 VAKISPTASIDERETGIIGSTLRQXXXXXXXXXXXNMNPYDRLDKEVISKKNAHTNSYRN 360
VAKISPTASIDERETGIIGSTLRQ NMNPYDRLDKEVISKKNAHTNSYRN
Sbjct: 61 VAKISPTASIDERETGIIGSTLRQDSTDSDSTGSSNMNPYDRLDKEVISKKNAHTNSYRN 120
Query: 361 DVDELEGSLRTLGLQKVNAPTIXXXXXXXXXXXXXXXXXXXXXXKIVKAEIKAPQQPMSL 540
DVDELEGSLRTLGLQKVNAPTI KIVKAEIKAPQQPMSL
Sbjct: 121 DVDELEGSLRTLGLQKVNAPTISSFSAWKSQSSALPAPSSSETSKIVKAEIKAPQQPMSL 180
Query: 541 VYPESEYSILVFVFQNPNYFDVMREMEKSMNIFTKLFRGSQIRNKNDLPSGRHLVNYRQN 720
VYPESEYSILVFVFQNPNYFDVMREMEKSMNIFTKLFRGSQIRNKNDLPSGRHLVNYRQN
Sbjct: 181 VYPESEYSILVFVFQNPNYFDVMREMEKSMNIFTKLFRGSQIRNKNDLPSGRHLVNYRQN 240
Query: 721 HAFDFAAMSHIWKENKMENLPKLPHRANLVMTLPSSRVRNSKICAFYRVLEKKEDKYILV 900
HAFDFAAMSHIWKENKMENLPKLPHRANLVMTLPSSRVRNSKICAFYRVLEKKEDKYILV
Sbjct: 241 HAFDFAAMSHIWKENKMENLPKLPHRANLVMTLPSSRVRNSKICAFYRVLEKKEDKYILV 300
Query: 901 ACHVNIHGFHRGDLRFVEVNNRTVLKGFERSSVIGHLFLGDILTVTELTRCNETVSNVAS 1080
ACHVNIHGFHRGDLRFVEVNNRTVLKGFERSSVIGHLFLGDILTVTELTRCNETVSNVAS
Sbjct: 301 ACHVNIHGFHRGDLRFVEVNNRTVLKGFERSSVIGHLFLGDILTVTELTRCNETVSNVAS 360
Query: 1081 SVEDASPDAPCQWMASKVVLFPRHEPVNVQFKFTCNGMASVVSTNEPMSVILNNLTEAKT 1260
SVEDASPDAPCQWMASKVVLFPRHEPVNVQFKFTCNGMASVVSTNEPMSVILNNLTEAKT
Sbjct: 361 SVEDASPDAPCQWMASKVVLFPRHEPVNVQFKFTCNGMASVVSTNEPMSVILNNLTEAKT 420
Query: 1261 NVEYTGIAFKSASYTVHTEDYTKKWYERIQEEISNIMIYPKALSTIYQYEEYTPNFVVEK 1440
NVEYTGIAFKSASYTVHTEDYTKKWYERIQEEISNIMIYPKALSTIYQYEEYTPNFVVEK
Sbjct: 421 NVEYTGIAFKSASYTVHTEDYTKKWYERIQEEISNIMIYPKALSTIYQYEEYTPNFVVEK 480
Query: 1441 QEQEEHPYQQDLEDLDLYRQHEMQTNVFTKFFDIGKSEKRKFGPGKSISNCRHSDAIDFA 1620
QEQEEHPYQQDLEDLDLYRQHEMQTNVFTKFFDIGKSEKRKFGPGKSISNCRHSDAIDFA
Sbjct: 481 QEQEEHPYQQDLEDLDLYRQHEMQTNVFTKFFDIGKSEKRKFGPGKSISNCRHSDAIDFA 540
Query: 1621 AMSYIWKNIRQQHLPKLPKLPNMVLPLPTSMPLDSEICAFYRVLVENKSKYILIACHMNV 1800
AMSYIWKNIRQQHLPKLPKLPNMVLPLPTSMPLDSEICAFYRVLVENKSKYILIACHMNV
Sbjct: 541 AMSYIWKNIRQQHLPKLPKLPNMVLPLPTSMPLDSEICAFYRVLVENKSKYILIACHMNV 600
Query: 1801 HGYHRGDLRFLEINESTKLYGFEGRSVIGQLFLGDIVAVTELARCNGHGSDAFKIPFDVS 1980
HGYHRGDLRFLEINESTKLYGFEGRSVIGQLFLGDIVAVTELARCNGHGSDAFKIPFDVS
Sbjct: 601 HGYHRGDLRFLEINESTKLYGFEGRSVIGQLFLGDIVAVTELARCNGHGSDAFKIPFDVS 660
Query: 1981 MSSQNTCTWMASKITLPSRPPPASVLFSFMKNRMAVVKGCDEPMNVEVKSIQNVEPDLIY 2160
MSSQNTCTWMASKITLPSRPPPASVLFSFMKNRMAVVKGCDEPMNVEVKSIQNVEPDLIY
Sbjct: 661 MSSQNTCTWMASKITLPSRPPPASVLFSFMKNRMAVVKGCDEPMNVEVKSIQNVEPDLIY 720
Query: 2161 KGTAFKPEKPELNFTEGFIKKKRHQIGSITLRIASYPNSFGTIYNFQESDIDNEHYKIGI 2340
KGTAFKPEKPELNFTEGFIKKKRHQIGSITLRIASYPNSFGTIYNFQESDIDNEHYKIGI
Sbjct: 721 KGTAFKPEKPELNFTEGFIKKKRHQIGSITLRIASYPNSFGTIYNFQESDIDNEHYKIGI 780
Query: 2341 NAFSEEKFTEISLDEREKIVETCSLMGFSAANTIFNGRFDCRAFKMEEIKKNGMTVMFCI 2520
NAFSEEKFTEISLDEREKIVETCSLMGFSAANTIFNGRFDCRAFKMEEIKKNGMTVMFCI
Sbjct: 781 NAFSEEKFTEISLDEREKIVETCSLMGFSAANTIFNGRFDCRAFKMEEIKKNGMTVMFCI 840
Query: 2521 ENPTSQPTLGLWCAGNRIVIGGPNGDVNGAIETVIDDPDIGYLRIAARLSRDIPKKFSFK 2700
ENPTSQPTLGLWCAGNRIVIGGPNGDVNGAIETVIDDPDIGYLRIAARLSRDIPKKFSFK
Sbjct: 841 ENPTSQPTLGLWCAGNRIVIGGPNGDVNGAIETVIDDPDIGYLRIAARLSRDIPKKFSFK 900
Query: 2701 GDGEFFVSQREVFENEILDDGYFKTLDPGCNGRRIIETLYGGKPLERVVVDKRDSSIERM 2880
GDGEFFVSQREVFENEILDDGYFKTLDPGCNGRRIIETLYGGKPLERVVVDKRDSSIERM
Sbjct: 901 GDGEFFVSQREVFENEILDDGYFKTLDPGCNGRRIIETLYGGKPLERVVVDKRDSSIERM 960
Query: 2881 MSQLFGVGSGISEHKTSGKKSEDTPTQFYFPSTPEPLALNKYQCEYVQMLLDGNPLIIGS 3060
MSQLFGVGSGISEHKTSGKKSEDTPTQFYFPSTPEPLALNKYQCEYVQMLLDGNPLIIGS
Sbjct: 961 MSQLFGVGSGISEHKTSGKKSEDTPTQFYFPSTPEPLALNKYQCEYVQMLLDGNPLIIGS 1020
Query: 3061 SPFGCGKSMTIITAALELYKLKKNRKQLLITQSNYASVNLIDIAQRVCLSGDDDLKDLKF 3240
SPFGCGKSMTIITAALELYKLKKNRKQLLITQSNYASVNLIDIAQRVCLSGDDDLKDLKF
Sbjct: 1021 SPFGCGKSMTIITAALELYKLKKNRKQLLITQSNYASVNLIDIAQRVCLSGDDDLKDLKF 1080
Query: 3241 VRFVSEKNWNELPSNCRTDSDMPYLMNKLFKDWAMGRIDLTNLTCLKTHHYVQMVSHIIK 3420
VRFVSEKNWNELPSNCRTDSDMPYLMNKLFKDWAMGRIDLTNLTCLKTHHYVQMVSHIIK
Sbjct: 1081 VRFVSEKNWNELPSNCRTDSDMPYLMNKLFKDWAMGRIDLTNLTCLKTHHYVQMVSHIIK 1140
Query: 3421 NDLVNPMLFGDHIAQIYDKLSADFSRAPHAQTLVEAFFMIYKPDLVMVTADSAKGLLNIL 3600
NDLVNPMLFGDHIAQIYDKLSADFSRAPHAQTLVEAFFMIYKPDLVMVTADSAKGLLNIL
Sbjct: 1141 NDLVNPMLFGDHIAQIYDKLSADFSRAPHAQTLVEAFFMIYKPDLVMVTADSAKGLLNIL 1200
Query: 3601 RDVCAVQIDEASQLAECTLLGLLKSFNNASFGLIGDIHQLPPYCEEGLEGKLKDFGIGNT 3780
RDVCAVQIDEASQLAECTLLGLLKSFNNASFGLIGDIHQLPPYCEEGLEGKLKDFGIGNT
Sbjct: 1201 RDVCAVQIDEASQLAECTLLGLLKSFNNASFGLIGDIHQLPPYCEEGLEGKLKDFGIGNT 1260
Query: 3781 MERAIKEKMFPVCTLRNVYRCHPKTTELLSELFYDGALVSGVSELARSDFMTKRDDFWPN 3960
MERAIKEKMFPVCTLRNVYRCHPKTTELLSELFYDGALVSGVSELARSDFMTKRDDFWPN
Sbjct: 1261 MERAIKEKMFPVCTLRNVYRCHPKTTELLSELFYDGALVSGVSELARSDFMTKRDDFWPN 1320
Query: 3961 PKFPMMFVNNTGASTKMGTSTSNSSEKSIVGEIVQNLINDPRNPVNPSDIGVISFYSAQT 4140
PKFPMMFVNNTGASTKMGTSTSNSSEKSIVGEIVQNLINDPRNPVNPSDIGVISFYSAQT
Sbjct: 1321 PKFPMMFVNNTGASTKMGTSTSNSSEKSIVGEIVQNLINDPRNPVNPSDIGVISFYSAQT 1380
Query: 4141 SILTEHLRGSGVKCGTVDAFQGSEKEIIIMCSTNERISDFMQLSNRLNVAMSRAKQVTII 4320
SILTEHLRGSGVKCGTVDAFQGSEKEIIIMCSTNERISDFMQLSNRLNVAMSRAKQVTII
Sbjct: 1381 SILTEHLRGSGVKCGTVDAFQGSEKEIIIMCSTNERISDFMQLSNRLNVAMSRAKQVTII 1440
Query: 4321 IGHLDGLRRANYWSTIVNKIEQNGNLVNANDWYQNQRRNKVSLSSYPLISTSRQSKQQRA 4500
IGHLDGLRRANYWSTIVNKIEQNGNLVNANDWYQNQRRNKVSLSSYPLISTSRQSKQQRA
Sbjct: 1441 IGHLDGLRRANYWSTIVNKIEQNGNLVNANDWYQNQRRNKVSLSSYPLISTSRQSKQQRA 1500
Query: 4501 NEYNSQHKHVKRQSNNDYGSQRSVTNSLNPEFVG--KWDDETYGDWPTIQKST 4653
NEYNSQHKHVKRQSNNDYGSQRSVTNSLNPEFVG KWDDETYGDWPTIQKST
Sbjct: 1501 NEYNSQHKHVKRQSNNDYGSQRSVTNSLNPEFVGFQKWDDETYGDWPTIQKST 1553
>gi|39589213|emb|CAE57946.1| Hypothetical protein CBG01003
[Caenorhabditis briggsae]
Length = 1239
Score = 1215 bits (3143), Expect = 0.0
Identities = 643/1285 (50%), Positives = 852/1285 (66%), Gaps = 21/1285 (1%)
Frame = +1
Query: 607 MREMEKSMNIFTKLFRGSQIRNKNDLPSGRHLVNYRQNHAFDFAAMSHIWKENKMENLPK 786
+ +E N+F++ + R P R + N++ + +FAA S+ W N +LP+
Sbjct: 1 LHALETEKNVFSQFYAKKWPRQLRK-PKNREISNFKHSEGAEFAAKSYFWDNNWDFDLPE 59
Query: 787 LPHRANLVMTLPSSRVRNSKICAFYRVLEKKEDKYILVACHVNIHGFHRGDLRFVEVNNR 966
LP ++M LP+S AFYRVL +KEDKYILVACH N+HGFHRGDLRF+E+N+R
Sbjct: 60 LPKPEQMIMPLPTSTPDVYDDFAFYRVLMEKEDKYILVACHANVHGFHRGDLRFLEINSR 119
Query: 967 TVLKGFERSSVIGHLFLGDILTVTELTRCNETVSNVAS-SVEDASPDAPCQWMASKVVLF 1143
+ L E SVIG LFLGDI+ VTEL R +E +S V V +PD C W+ SK++L+
Sbjct: 120 SRLNRLEGQSVIGSLFLGDIVAVTELARNSEAISPVRDVDVSLVTPDTSCYWIVSKMILY 179
Query: 1144 PRHEPVNVQFKFTC-NGMASVVSTNEPMSVILNNLTEAKTNVEYTGIAFKSASYTVH-TE 1317
PR+ F+ N MA++ NEPM++ ++N + YTG+ F+ + H ++
Sbjct: 180 PRNVDKKSPVLFSIVNRMAAIKGENEPMNLNVDNWDMMHADSIYTGLTFRPETLEYHFSK 239
Query: 1318 DYTKKWYERIQEEISNIMIYPKALSTIYQYEE--YTPNFVVEKQEQEEHPYQQDLEDLDL 1491
DY KK + I YP TI++++E + F K+E + Y + ++L
Sbjct: 240 DYQKKKINELVVSARTIRSYPGIYGTIFKFKEGDHREEF---KKEMHLNTYTDESKELKR 296
Query: 1492 YRQHEMQTNVFTKFFDIGKSEKRKFGPG-KSISNCRHSDAIDFAAMSYIWKNIRQQHLPK 1668
+ E + NVF++++ +R+ G K S+C+H +AI+FAA S +W N + LP
Sbjct: 297 LAELEHEKNVFSQYYQKKSGNRRENHRGRKKPSSCKHHEAIEFAAKSNLWDNNWDKDLPM 356
Query: 1669 LPKLPNMVLPLPTSMPLDSEICAFYRVLVENKSKYILIACHMNVHGYHRGDLRFLEINES 1848
LP+ +++PLP S P +E+C YRVL+E KYILIACH+NVHGYHRGDLRFLE+N
Sbjct: 357 LPRSQEIIMPLPASAPAQTEVCGLYRVLMEKNDKYILIACHVNVHGYHRGDLRFLEVNSR 416
Query: 1849 TKLYGFEGRSVIGQLFLGDIVAVTELARCNGHGSDAFKIPFDVSMSSQNTCTWMASKITL 2028
++L G +SVIG LFLGDIVAVTELAR N + + + S++ + C W+ S + L
Sbjct: 417 SRLKGLSEQSVIGSLFLGDIVAVTELAR-NSNAQSSVRDVKVSSVTQETRCYWIVSNMIL 475
Query: 2029 PSRPPPASVLFSFMKNRMAVVKGCDEPMNVEVKSIQNVEPDLIYKGTAFKPEKPELNFTE 2208
R V FSF+KNRMAVVKG DEPM V + V PDLIY G AF P K + NF++
Sbjct: 476 YPRILKPDVTFSFLKNRMAVVKGEDEPMRVNCDDWKTVAPDLIYTGMAFSPIKLDDNFSD 535
Query: 2209 GFIKKKRHQIGSITLRIASYPNSFGTIYNFQESDIDNEHYKIGINAFSEEKFTEISLDER 2388
F +K ++ + S L+I+SYPN+FG IY+++E NE +KIG A+S+ EI +R
Sbjct: 536 DFQRKSKNLLISNVLKISSYPNAFGIIYSYEECSEQNEEFKIGTKAYSDT--LEIHKYKR 593
Query: 2389 EKIVETCSLMGFSAANTIFNGRFDCRAFKMEEIKKNGMTVMFCIENPTSQPTLGLWCAGN 2568
E+IVETCSLMGFSAANTIFNGRFDCRAF M ++ K G TV F IENP ++PTLGLW GN
Sbjct: 594 ERIVETCSLMGFSAANTIFNGRFDCRAFHMYDVSKEGPTVRFRIENPRNRPTLGLWNNGN 653
Query: 2569 RIVIGGPNGDVNGAIETVI-DDPDIGYLRIAARLSRDIPKKFSFKGDGEFFVSQREVFEN 2745
+I+IGGP GD NG IETV+ + +G+L+IAARL+R+ PK F F GD FVSQRE ++
Sbjct: 654 KILIGGPTGDTNGTIETVMCNSSHMGWLKIAARLTRECPKDFRFNGD--LFVSQREPKDH 711
Query: 2746 EILDDGYFKTLDPGCNGRRIIETLYGGKPLERVVVDKRDSSIERMMSQLFGVGSGISEHK 2925
L DGYF+ + P NGR+IIETLYGGKPLE
Sbjct: 712 YYLYDGYFQDMAPESNGRKIIETLYGGKPLE----------------------------- 742
Query: 2926 TSGKKSEDTPTQFYFPSTPEPLALNKYQCEYVQMLLDGNPLIIGSSPFGCGKSMTIITAA 3105
++ D +++FPSTPEP+ LN +Q EYVQMLLDGNPL+IGSSPFGCGKSMTIITAA
Sbjct: 743 ---LRTGDVGGEYFFPSTPEPIRLNVFQKEYVQMLLDGNPLVIGSSPFGCGKSMTIITAA 799
Query: 3106 LELYKLKKNRK------QLLITQSNYASVNLIDIAQRVCLSGDDDLKDLKFVRFVSEKNW 3267
LE+YK R QLLITQSN+ASVNLI+IA++ C SGD+ L+++KF+RF+++KNW
Sbjct: 800 LEIYKRNAERNLVGKTHQLLITQSNFASVNLIEIARKTCNSGDEKLRNMKFMRFITDKNW 859
Query: 3268 NELPSNCRTDSDMPYLMNKLFKDWAMGRIDLTNLTCLKTHHYVQMVSHIIKNDLVNPMLF 3447
NE P + RT DMP+LMNK+FK WA+G +D L THH M++HII+N V
Sbjct: 860 NEQPDHGRTKFDMPFLMNKVFKQWAIGELDGNE---LMTHHTKSMIAHIIRNGTVTVDEL 916
Query: 3448 GDHIAQIYDKLSADFSRAPHAQTLVEAFFMIYKPDLVMVTADSAKGLLNIL--------R 3603
+++DK + P + L EAFF++Y+PDL+M TADS+K + +L
Sbjct: 917 CSAARRVFDKYGD--CKIPFSGHLTEAFFILYEPDLIMTTADSSKSVCTLLDKKYETNKN 974
Query: 3604 DVCAVQIDEASQLAECTLLGLLKSFNNASFGLIGDIHQLPPYCEEGLEGKLKDFGIGNTM 3783
+ VQIDEASQL E TLLGLLK++N A+FGLIGDIHQLPP+C E LEG+LK+FGIGNTM
Sbjct: 975 ECTTVQIDEASQLPEYTLLGLLKTYNKANFGLIGDIHQLPPFCMEELEGRLKEFGIGNTM 1034
Query: 3784 ERAIKEKMFPVCTLRNVYRCHPKTTELLSELFYDGALVSGVSELARSDFMTKRDDFWPNP 3963
ERAI+ K+FP+ LR VYRCHP+TT LLSELFYDG L+SGV+E R++FM KR DFWPNP
Sbjct: 1035 ERAIQNKLFPISNLRYVYRCHPQTTALLSELFYDGKLISGVTESQRNEFMIKRKDFWPNP 1094
Query: 3964 KFPMMFVNNTGASTKMGTSTSNSSEKSIVGEIVQNLINDPRNPVNPSDIGVISFYSAQTS 4143
+P+M +N+ G +MGTS N SEK +V +VQNL++ + + P DIGVISFY+AQTS
Sbjct: 1095 SYPVMIINHMGTCQRMGTSAQNHSEKDLVSYMVQNLLDQRKYTLKPQDIGVISFYAAQTS 1154
Query: 4144 ILTEHLRGSGVKCGTVDAFQGSEKEIIIMCSTNERISDFMQLSNRLNVAMSRAKQVTIII 4323
+LTE LR SGVKCGTVDAFQGSEKE+II+C TNE ++FMQ RLNVA+SRAKQ T+I+
Sbjct: 1155 LLTEQLRRSGVKCGTVDAFQGSEKEVIILCCTNEHATEFMQCKFRLNVALSRAKQATVIV 1214
Query: 4324 GHLDGLRRANYWSTIVNKIEQNGNL 4398
G+L LR+A YW+ IV ++E GNL
Sbjct: 1215 GNLGYLRKAKYWNAIVKRVEAYGNL 1239
>gi|39579679|emb|CAE56511.1| Hypothetical protein CBG24231
[Caenorhabditis briggsae]
Length = 1034
Score = 791 bits (2044), Expect = 0.0
Identities = 466/1041 (44%), Positives = 638/1041 (60%), Gaps = 25/1041 (2%)
Frame = +1
Query: 1498 QHEMQTNVFTKFFDIG---KSEKRKFGPGK---SISNCRHSDAIDFAAMSY-IWKNIRQQ 1656
Q E NVFT+F+ K K+K + ++ + +H A++FA S IWK
Sbjct: 9 QEERNKNVFTQFYTPSYQSKQAKKKEVINEVQQALRDYKHKYALNFACTSLLIWKKFVFL 68
Query: 1657 HLPKLPKLPNMVLPLPTSMPLDSEICAFYRVLVENKSKYILIACHMNVHGYHRGDLRFLE 1836
P+L + + + +P + A+YRV+ E KY+L ACH+NVHGYHRGDLRF+E
Sbjct: 69 DFPELKRSSSQPV---CQIPPTDKAFAYYRVVSEFSDKYLLTACHVNVHGYHRGDLRFIE 125
Query: 1837 INESTKLYGF-EGRSVIGQLFLGDIVAVTELARCNGHGSDAFKIPFDVSMSSQNTCTWMA 2013
IN T G EG +G+LF+GDIVAVT +A + + I FD++ S CTWMA
Sbjct: 126 INNRTVTRGIPEGEHCLGRLFIGDIVAVTGMAIRKKF--EEYTI-FDITKDSD--CTWMA 180
Query: 2014 SKITLPSRPPPASVLFSFMKNRMAVVKGCDEPMNVEVKSIQNVEPDLIYKGTAFKPEKPE 2193
+ IT+ R FS +KN AVVK E MNV+ S + ++ ++Y G+AF PEK
Sbjct: 181 TNITVLPRSSKKDATFSTLKNGTAVVKEHSEVMNVD--SPKPLKIGILYTGSAFLPEKMA 238
Query: 2194 LNFTEGFIKKKRHQIGSITLRIASYPNSFGTIYNFQESDIDNEHYKIGINAFSEEKFTEI 2373
N+ F +++++ + +I YPN+ GTI+ FQE + ++IG +AF +EI
Sbjct: 239 NNYCMDFQPDRKNELIYTSSKIHQYPNALGTIFKFQEDPELTKMFEIGTDAFLCSSASEI 298
Query: 2374 SLDEREKIVETCSLMGFSAANTIFNGRFDCRAFKMEEIKKNGMTVMFCIENPTSQPTLGL 2553
+ETC LMG++AAN+I NGRFD R+F ME I + G V F I+NP PT G
Sbjct: 299 --------LETCVLMGYAAANSITNGRFDSRSFPMENIDRKGPIVKFQIDNPADNPTEGK 350
Query: 2554 WCAGNRIVIGGPNGDVNGAIETVIDDPDIGYLRIAARLSRDIPKKFSFKGDGEFFVSQRE 2733
W +RI I GP G+ N IETVI + L I +RLSRD+P + F+ +G F V QRE
Sbjct: 351 WTINSRIKISGPTGECNAIIETVILQKN--RLSITSRLSRDVPHREKFQ-EGLFIVYQRE 407
Query: 2734 VFENEILDDGYFKTLDPGCNGRRIIETLYGGKPLERVVVDKRDSSIERMMSQLFGVGSGI 2913
E++IL G+F+ + NGR+I+E LYG PLE + ++ +I
Sbjct: 408 APESQILRTGFFEKVPSRSNGRKILEVLYGADPLE----NPKNQAI-------------- 449
Query: 2914 SEHKTSGKKSEDTPTQFYFPSTPEPLALNKYQCEYVQMLLDGN-PLIIGSSPFGCGKSMT 3090
Q++FP L LN YQCEYV MLL+ P+++GSSPFGCGKSMT
Sbjct: 450 --------------FQYFFPGKEGKLKLNYYQCEYVSMLLNPEIPIVVGSSPFGCGKSMT 495
Query: 3091 IITAALELYK--------LKKNRKQLLITQSNYASVNLIDIAQRVCLSGD-DDLKDLKFV 3243
I+TAALE++K K ++QLL+TQSNYASVNL+DI+ ++ L ++ K LKFV
Sbjct: 496 IVTAALEIFKEIDSMKKKKDKKKRQLLVTQSNYASVNLVDISGKIYLEDQQEEDKKLKFV 555
Query: 3244 RFVSEKNWNELPSNCRTDSDMPYLMNKLFKDWA-MGRIDLTNLTCLKTHHYVQMVSHIIK 3420
RFVSEKNW ELP C TD D+P LM ++F DWA + R D + L+ H MV + K
Sbjct: 556 RFVSEKNWKELPLECLTDYDLPMLMEQVFLDWATVERSD--DPVELEDRHKRDMVLFLTK 613
Query: 3421 NDLVNPMLFGDHIAQIYDKLSADFSRAPHAQTLVEAFFMIYKPDLVMVTADSAKGLLNIL 3600
V+ F + Y ++ + P TL+EAFF++Y PD++M TADS + LL+
Sbjct: 614 EKKVDHSRFNSQALRFYSQVQQE---DPWRSTLLEAFFLLYNPDIIMTTADSLQTLLSSR 670
Query: 3601 ----RDVCAVQIDEASQLAECTLLGLLKSFNNASFGLIGDIHQLPPYCEEGLEGKLKDFG 3768
DV +QIDEASQ+ E T + LL F A+FGLIGDI QLPPYCE GL+GKLKD+G
Sbjct: 671 VLTPEDVYTIQIDEASQVPEYTFISLLTQFPKATFGLIGDIQQLPPYCETGLDGKLKDYG 730
Query: 3769 IGNTMERAIKEKMFPVCTLRNVYRCHPKTTELLSELFYDGALVSGVSELARSDFMTKRDD 3948
IGNTMER ++E++FP LR VYRCHPK T LLS+LFY G L+SGV+E R+ FM R D
Sbjct: 731 IGNTMERCVEEELFPQAMLREVYRCHPKITGLLSDLFYKGKLISGVTEAMRNTFMENRTD 790
Query: 3949 FWPNPKFPMMFVNNTGASTKMGTSTSNSSEKSIVGEIVQNLINDPRN--PVNPSDIGVIS 4122
FWP+ +P++ +NN + KMGTS N+SEK IV +++ +L+ P N + P+ IGVIS
Sbjct: 791 FWPSSNYPVLLINNNESGYKMGTSCGNTSEKLIVQKLL-DLLCKPNNGYKLEPTQIGVIS 849
Query: 4123 FYSAQTSILTEHLRGSGVKCGTVDAFQGSEKEIIIMCSTNERISDFMQLSNRLNVAMSRA 4302
FYSAQTS+LTE LRG VKCGTVDAFQG+E+++I++C TNE+IS+FMQ+SNR+NVAMSRA
Sbjct: 850 FYSAQTSVLTEALRGRQVKCGTVDAFQGTERDVIVLCCTNEKISEFMQMSNRINVAMSRA 909
Query: 4303 KQVTIIIGHLDGLRRANYWSTIVNKIEQNGNLVNANDWYQNQRRNKVSLSSYPLISTSRQ 4482
KQVTII+G+L+GL++ANYW IV K ++N ++ A R+ ++ S P R+
Sbjct: 910 KQVTIIVGNLNGLKKANYWREIVKKAQENRCVIEA--------RSILNTSGPP---AGRR 958
Query: 4483 SKQQRANEYNSQHKHVKRQSN 4545
+ +R N+ N K V N
Sbjct: 959 QRNRRNNKENFAQKKVNFNEN 979
Score = 136 bits (343), Expect = 4e-30
Identities = 91/274 (33%), Positives = 144/274 (52%), Gaps = 9/274 (3%)
Frame = +1
Query: 619 EKSMNIFTKLFRGS----QIRNKNDLPSGRH-LVNYRQNHAFDFAAMSH-IWKENKMENL 780
E++ N+FT+ + S Q + K + + L +Y+ +A +FA S IWK+ +
Sbjct: 11 ERNKNVFTQFYTPSYQSKQAKKKEVINEVQQALRDYKHKYALNFACTSLLIWKKFVFLDF 70
Query: 781 PKLPHRANL-VMTLPSSRVRNSKICAFYRVLEKKEDKYILVACHVNIHGFHRGDLRFVEV 957
P+L ++ V +P + K A+YRV+ + DKY+L ACHVN+HG+HRGDLRF+E+
Sbjct: 71 PELKRSSSQPVCQIPPT----DKAFAYYRVVSEFSDKYLLTACHVNVHGYHRGDLRFIEI 126
Query: 958 NNRTVLKGF-ERSSVIGHLFLGDILTVTELTRCNETVSNVASSVEDASPDAPCQWMASKV 1134
NNRTV +G E +G LF+GDI+ VT + + ++ D + D+ C WMA+ +
Sbjct: 127 NNRTVTRGIPEGEHCLGRLFIGDIVAVTGMAIRKKFEE---YTIFDITKDSDCTWMATNI 183
Query: 1135 VLFPRHEPVNVQFKFTCNGMASVVSTNEPMSVILNNLTEAKTNVEYTGIAF-KSASYTVH 1311
+ PR + F NG A V +E M+V ++ K + YTG AF +
Sbjct: 184 TVLPRSSKKDATFSTLKNGTAVVKEHSEVMNV--DSPKPLKIGILYTGSAFLPEKMANNY 241
Query: 1312 TEDYTKKWYERIQEEISNIMIYPKALSTIYQYEE 1413
D+ + S I YP AL TI++++E
Sbjct: 242 CMDFQPDRKNELIYTSSKIHQYPNALGTIFKFQE 275
>gi|39579473|emb|CAE56882.1| Hypothetical protein CBG24721
[Caenorhabditis briggsae]
Length = 2174
Score = 729 bits (1882), Expect = 0.0
Identities = 409/1009 (40%), Positives = 602/1009 (59%), Gaps = 18/1009 (1%)
Frame = +1
Query: 1432 VEKQEQEEHPYQQDLEDLDLYRQHEMQTNVFTKFFDIGKSEKRKF------GPGKSISNC 1593
+E + + Y +E ++ E++ N F++F+ + F ++
Sbjct: 1099 IEHRLTDSKTYLYQMESGKIHFDRELKLNAFSRFYRTAPAPDETFKRTIDSDVQSELNKY 1158
Query: 1594 RHSDAIDFAAMSYIWKNIRQQHLPKLPKLPNMVLPLPTSMPLDSEICAFYRVLVENKSKY 1773
HSDAI FAA S+ W++ + LP+ T I A+YRVL + Y
Sbjct: 1159 THSDAIRFAAKSWTWESNTGEELPRREDKGIQTFRFQTG------IRAYYRVLADKGDSY 1212
Query: 1774 ILIACHMNVHGYHRGDLRFLEINESTKLYGFEGRSVIGQLFLGDIVAVTELARCNGHGSD 1953
+LIACH N+HGYHRGDLRF+E+N++T+ G S+IG+L+ GD+VA+ ELA+ +
Sbjct: 1213 VLIACHANLHGYHRGDLRFVEVNDTTETQGMGKSSIIGKLYPGDVVAIVELAKKK---NV 1269
Query: 1954 AFKIPFDVSMSSQNTCTWMASKITLPSRPPPASVLFSFMKNRMAVVKGCDEPMNVEVKSI 2133
P + + C W +T+ R V F+ +++ AVV+G MNV S+
Sbjct: 1270 PLNPPGVFQVHPEFECFWEVRHMTILMRKQDREVNFAIIEDGTAVVEGFSRSMNVLDDSL 1329
Query: 2134 QN-VEPDLIYKGTAFKPEKPELNFTEGFIKKKRHQIGSITLRIASYPNSFGTIYNFQESD 2310
+E + IY G AF PE+ ++NFTE F +K + + ++ ++ +Y +S GTI+ + S+
Sbjct: 1330 STPLEVNKIYFGYAFIPERVKMNFTEDFDRKYENLLTALYSKLPTYAHSSGTIFTYAPSE 1389
Query: 2311 IDNEHYKIGINAFSEEKFTEISLDEREKIVETCSLMGFSAANTIFNGRFDCRAFKMEEIK 2490
+ +KIG +AF + + + + K+VETC MG +AA TI N RFD R+F ++ ++
Sbjct: 1390 MQTRFFKIGRDAFCKHAY-RLYGSQPNKVVETCVRMGAAAAQTIGNNRFDERSFPIQSVQ 1448
Query: 2491 KNGMTVMFCIENPTSQPTLGLWCAGNRIVIGGPNGDVNGAIETVIDDPDIGYLRIAARLS 2670
++ V F I NP QPT G W RIV+ G N + IETV+ + D+ ++RI+AR+
Sbjct: 1449 QDDRIVSFAIPNPEKQPTEGRWSNNTRIVLSGTNRKICAIIETVVFENDVNFIRISARIP 1508
Query: 2671 RDIPKKFSFKGDGEFFVSQREVFENEILDDGYFKTLDPGCNGRRIIETLYGGKPLERVVV 2850
+D + +F+ D + V Q + E +D G+ L+ NG RII+TLYGG+ +
Sbjct: 1509 KDSSRNINFRED-TWIVHQGKSPEIPRIDRGFLSRLEENSNGSRIIKTLYGGESINL--- 1564
Query: 2851 DKRDSSIERMMSQLFGVGSGISEHKTSGKKSEDTPTQFYFPSTPEPLALNKYQCEYVQML 3030
DSS D + F FPS+P + LN++Q +YV +
Sbjct: 1565 ---DSS------------------------EIDLNSSFCFPSSPV-IVLNEFQNDYVSKI 1596
Query: 3031 LDGNPLIIGSSPFGCGKSMTIITAALELYKLK-------KNRKQLLITQSNYASVNLIDI 3189
L P+++G+SPFGCGKSMTI+TAA+E++K K R+QLL+TQSN A V+L++I
Sbjct: 1597 LANVPIVLGNSPFGCGKSMTIVTAAIEIHKQNGRFNGHGKQRQQLLVTQSNNAGVSLVEI 1656
Query: 3190 AQRVCLSGDDDLKDLKFVRFVSEKNWNELPSNCRTDSDMPYLMNKLFKDWAMGRIDLTNL 3369
A+++ D +KF+R++SE NWN LP + RTD DMP LM +F WA+G ++ T
Sbjct: 1657 ARKI----DSSQVKIKFLRYISENNWNVLPDSSRTDLDMPKLMRDMFVPWAIGTVERTTS 1712
Query: 3370 TCLKTHHYVQMVSHIIKNDLVNPMLFGDHIAQIYDKLSA-DFSRAPHAQTLVEAFFMIYK 3546
T Q + + + + P ++IYD L+ D P +TL EAFF+ Y+
Sbjct: 1713 LNFLTIGMKQAIVRKVAQEYLYPSQLVGEASRIYDTLNEYDKITEPSPRTLREAFFIFYE 1772
Query: 3547 PDLVMVTADSAKGLL--NILRDVCAVQIDEASQLAECTLLGLLKSFNNASFGLIGDIHQL 3720
PD+++ TADS +GLL N+ + ++QIDEASQL E TL+ +L+ F +A +GL+GDI QL
Sbjct: 1773 PDIIVSTADSLQGLLSCNLRLQISSIQIDEASQLPEHTLIYILQRFPHAGYGLVGDIKQL 1832
Query: 3721 PPYCEEGLEGKLKDFGIGNTMERAIKEKMFPVCTLRNVYRCHPKTTELLSELFYDGALVS 3900
PP+CE+ L+G LKD+GIGNTM+RAI E MF L VYRCHP TTELLS++FYDG+L+
Sbjct: 1833 PPHCEKELKGLLKDYGIGNTMQRAINELMFLQSNLLYVYRCHPVTTELLSDMFYDGSLIP 1892
Query: 3901 GVSELARSDFMTKRDDFWPNPKFPMMFVNNTGASTKMGTSTSNSSEKSIVGEIVQNLIND 4080
GVSE R++FM R D WPN +FP++ +N G K+GTS +N EK+ V IV L +
Sbjct: 1893 GVSEFDRNEFMRMRPDIWPNVRFPILVLNQKGEGYKVGTSVANEVEKNYVLRIVSMLTRE 1952
Query: 4081 PRN-PVNPSDIGVISFYSAQTSILTEHLRGSGVKCGTVDAFQGSEKEIIIMCSTNERISD 4257
+ SDIGVISFY AQTS+LTE R + VKCGT+DAFQGSEKE+II+C TN++IS
Sbjct: 1953 VNGYRLKESDIGVISFYRAQTSLLTEAFRSTDVKCGTIDAFQGSEKEVIIVCCTNKKISP 2012
Query: 4258 FMQLSNRLNVAMSRAKQVTIIIGHLDGLRRANYWSTIVNKIEQNGNLVN 4404
FMQL NRLNVA+SR++Q TI+IG++ GLR A YW TIV + ++N L++
Sbjct: 2013 FMQLGNRLNVALSRSRQATILIGNVAGLREAKYWGTIVREAQENQCLID 2061
Score = 132 bits (332), Expect = 8e-29
Identities = 89/295 (30%), Positives = 140/295 (47%), Gaps = 10/295 (3%)
Frame = +1
Query: 613 EMEKSMNIFTKLFRGSQIRNKN-----DLPSGRHLVNYRQNHAFDFAAMSHIWKENKMEN 777
+ E +N F++ +R + ++ D L Y + A FAA S W+ N E
Sbjct: 1121 DRELKLNAFSRFYRTAPAPDETFKRTIDSDVQSELNKYTHSDAIRFAAKSWTWESNTGEE 1180
Query: 778 LPKLPHRANLVMTLPSSRVRNSKICAFYRVLEKKEDKYILVACHVNIHGFHRGDLRFVEV 957
LP+ + + I A+YRVL K D Y+L+ACH N+HG+HRGDLRFVEV
Sbjct: 1181 LPRREDKGIQTFRFQTG------IRAYYRVLADKGDSYVLIACHANLHGYHRGDLRFVEV 1234
Query: 958 NNRTVLKGFERSSVIGHLFLGDILTVTELTRCNETVSNVASSVEDASPDAPCQWMASKVV 1137
N+ T +G +SS+IG L+ GD++ + EL + N V P+ C W +
Sbjct: 1235 NDTTETQGMGKSSIIGKLYPGDVVAIVELAKKKNVPLN-PPGVFQVHPEFECFWEVRHMT 1293
Query: 1138 LFPRHEPVNVQFKFTCNGMASVVSTNEPMSVILNNL-TEAKTNVEYTGIAFKSASYTVH- 1311
+ R + V F +G A V + M+V+ ++L T + N Y G AF ++
Sbjct: 1294 ILMRKQDREVNFAIIEDGTAVVEGFSRSMNVLDDSLSTPLEVNKIYFGYAFIPERVKMNF 1353
Query: 1312 TEDYTKKWYERIQEEISNIMIYPKALSTIYQY---EEYTPNFVVEKQEQEEHPYQ 1467
TED+ +K+ + S + Y + TI+ Y E T F + + +H Y+
Sbjct: 1354 TEDFDRKYENLLTALYSKLPTYAHSSGTIFTYAPSEMQTRFFKIGRDAFCKHAYR 1408
>gi|39582377|emb|CAE74761.1| Hypothetical protein CBG22588
[Caenorhabditis briggsae]
Length = 1187
Score = 716 bits (1847), Expect = 0.0
Identities = 423/997 (42%), Positives = 599/997 (59%), Gaps = 29/997 (2%)
Frame = +1
Query: 1501 HEMQTNVFTKFF--------DIGKS-EKRKFGPGK-SISNCRHSDAIDFAAMSYIW-KNI 1647
+E +N F++F+ D G + E GP + I H AI+FA S W K
Sbjct: 42 NEWDSNAFSRFYFFDVRQRRDTGSNGEAEDLGPQQMEIDKYTHRHAINFAGKSLEWAKET 101
Query: 1648 RQQHLPKLPKLPNMVLPLPTSMPLDS--EICAFYRVLVENKSKYILIACHMNVHGYHRGD 1821
++ P L + P D+ I A+YRV+ E++ KY+L+ACH N+HG+HRGD
Sbjct: 102 SKKRKVLEPTLDAQLAPSRCIFKFDATQSIRAYYRVVSEHEDKYVLMACHTNLHGFHRGD 161
Query: 1822 LRFLEINESTKLYGFEGRSVIGQLFLGDIVAVTELARCNGHGSDAFKIPFDVSMSSQNTC 2001
LRF+E+N T GFE S++G+LFLGDI+AVT+L++ + D P + M+ +T
Sbjct: 162 LRFVEVNARTVTDGFEKFSIVGKLFLGDILAVTKLSKMSKKPLDP---PKALKMNPDSTM 218
Query: 2002 TWMASKITLPSRPPPASVLFSFMKNRMAVVKGCDEPMNVEVKSIQNVEPDLIYKGTAFKP 2181
W +++ + R +F+FMK A+VKG +E V + ++ + +Y G+AF P
Sbjct: 219 IWEVAEMRILERKLVHRTVFAFMKCGSAIVKGKNEAAAVLLNDNSPIDLESLYTGSAFIP 278
Query: 2182 EKPELNFTEGFIKKKRHQIGSITLRIASYPNSFGTIYNFQESDIDNEHYKIGINAFSEEK 2361
K + + K+ + ++ + R +S PN+ TIY ++ S + + I +AF +
Sbjct: 279 TKLASRISYDYKKEVKSKLLEYSSRFSSCPNALATIYKYELSPELTQKFNIRKDAFKQST 338
Query: 2362 FTEISLDEREKIVETCSLMGFSAANTIFNGRFDCRAFKMEEIKKNGMTVMFCIENPTSQP 2541
+ E+I E C+ MG SA T+ +GR D R F M K V F I NP P
Sbjct: 339 -------DSEEITELCTQMGQSAVLTLSDGRADSRMFPMLNPVKEEEGVKFSISNPLKYP 391
Query: 2542 TLGLWCAGNRIVIGGPNGDVNGAIETVIDDPDIGYLRIAARLSRDIPKKFSFKGDGEFFV 2721
T GLW NR+ G G ++ IETVI P+ L+I AR+S++ ++ +F+ +G F V
Sbjct: 392 TEGLWNCSNRVRFEGMCGKIDATIETVI--PEENVLKIYARVSKESLRRLNFR-EGTFVV 448
Query: 2722 SQREVFENEILDDGYFKTLDPGCNGRRIIETLYGGKPLERVVVDKRDSSIERMMSQLFGV 2901
QRE E +L+DGY + L GR+IIE LYGG L KRD SI
Sbjct: 449 YQREAREATMLEDGYLRKLHSSRKGRQIIEALYGGVSL------KRDLSI---------- 492
Query: 2902 GSGISEHKTSGKKSEDTPTQFYFPSTPEPLALNKYQCEYVQMLLDGN-PLIIGSSPFGCG 3078
G + H FPS P P +LN++Q +YV M+ P+++GSSPFGCG
Sbjct: 493 -LGPAPH-------------CIFPSDP-PTSLNEFQNQYVSMMTSSYYPMLLGSSPFGCG 537
Query: 3079 KSMTIITAALELYKLKKNRKQLLITQSNYASVNLIDIAQRVCLSGDDDLKDLKFVRFVSE 3258
KSMTI+ AA+E K ++ +Q LIT+SNYASVNLIDIA++V S +K +R+V+E
Sbjct: 538 KSMTIVMAAIEKCKRHESSQQFLITESNYASVNLIDIARKVKKS------KMKIMRYVTE 591
Query: 3259 KNWNELPSNCRTDSDMPYLMNKLFKDWAMGRIDLTNLTCLKTHHYVQMVSHIIKNDLVNP 3438
NW ELP +CRT+ D+P LM+ +FK A G I T + T + + I K + +
Sbjct: 592 SNWKELPEHCRTEYDLPVLMSAIFKQLAHGEIGNRESTSI-TEKMIILAYLISKKEFMED 650
Query: 3439 MLFGDHIAQIYDKLSADFSRAPHAQTLVEAFFMI---YKPDLVMVTADSAKGLLN--ILR 3603
+L + + +D P + EAF ++ YKP+++++TAD+ + ++N +
Sbjct: 651 LL-SSPLKTFHSNYKSDVEDYPIQRRNREAFEILLRFYKPNVIVITADTLQSMMNCSVYF 709
Query: 3604 DVCAVQIDEASQLAECTLLGLLKSFNNASFGLIGDIHQLPPYCEEGLEGKLKDFGIGNTM 3783
+V +QIDEA QL ECTL+ LL+ F NA++GLIGDI QLPPYCE+ L+GKLK++GIGNTM
Sbjct: 710 NVVMIQIDEACQLPECTLISLLRLFPNANYGLIGDIKQLPPYCEDELKGKLKEYGIGNTM 769
Query: 3784 ERAIKEKMFPVCTLRNVYRCHPKTTELLSELFYDGALVSGVSELARSDFMTKRDDFWPNP 3963
ERAI+EKMFP LR VYRCHPK TELLSELFYDG L+SGV E+ R++FM +R DFWPNP
Sbjct: 770 ERAIEEKMFPEAILRYVYRCHPKITELLSELFYDGNLISGVEEIQRNEFMRRRQDFWPNP 829
Query: 3964 KFPMMFVNNTGASTKMGTSTSNSSEKSIVGEIVQNLINDPRN-PVNPSDIGVISFYSAQT 4140
+P++ V+N + K+GTS N +EK + +IV+ L+ + + PSDIGVISFY+ QT
Sbjct: 830 HYPIIVVHNRDKAYKIGTSCGNRTEKILAKQIVKELLKEENGYQLKPSDIGVISFYAGQT 889
Query: 4141 S---------ILTEHLRGSGVKCGTVDAFQGSEKEIIIMCSTNERISDFMQLSNRLNVAM 4293
S +L++ RG+GV CGTVDAFQGSE+E+II+C TNERIS+FMQLSNRLNVAM
Sbjct: 890 SAETLKFCFPVLSDSFRGTGVNCGTVDAFQGSEREVIILCCTNERISEFMQLSNRLNVAM 949
Query: 4294 SRAKQVTIIIGHLDGLRRANYWSTIVNKIEQNGNLVN 4404
SRA+Q TIIIG+ GL A YWS IV K+E+NG +V+
Sbjct: 950 SRARQATIIIGNSIGLSEAKYWSQIVKKVEENGGVVD 986
Score = 149 bits (376), Expect = 6e-34
Identities = 99/278 (35%), Positives = 144/278 (51%), Gaps = 11/278 (3%)
Frame = +1
Query: 685 PSGRHLVNYRQNHAFDFAAMSHIWKENKMENLPKLPHRANLVMTLPSSRV-----RNSKI 849
P + Y HA +FA S W + + L L L SR I
Sbjct: 74 PQQMEIDKYTHRHAINFAGKSLEWAKETSKKRKVL--EPTLDAQLAPSRCIFKFDATQSI 131
Query: 850 CAFYRVLEKKEDKYILVACHVNIHGFHRGDLRFVEVNNRTVLKGFERSSVIGHLFLGDIL 1029
A+YRV+ + EDKY+L+ACH N+HGFHRGDLRFVEVN RTV GFE+ S++G LFLGDIL
Sbjct: 132 RAYYRVVSEHEDKYVLMACHTNLHGFHRGDLRFVEVNARTVTDGFEKFSIVGKLFLGDIL 191
Query: 1030 TVTELTRCNETVSNVASSVEDASPDAPCQWMASKVVLFPRHEPVNVQFKFTCNGMASVVS 1209
VT+L++ ++ + +++ +PD+ W +++ + R F F G A V
Sbjct: 192 AVTKLSKMSKKPLDPPKALK-MNPDSTMIWEVAEMRILERKLVHRTVFAFMKCGSAIVKG 250
Query: 1210 TNEPMSVILNNLTEAKTNVEYTGIAF---KSASYTVHTEDYTKKWYERIQEEISNIMIYP 1380
NE +V+LN+ + YTG AF K AS + DY K+ ++ E S P
Sbjct: 251 KNEAAAVLLNDNSPIDLESLYTGSAFIPTKLASRISY--DYKKEVKSKLLEYSSRFSSCP 308
Query: 1381 KALSTIYQYE---EYTPNFVVEKQEQEEHPYQQDLEDL 1485
AL+TIY+YE E T F + K ++ +++ +L
Sbjct: 309 NALATIYKYELSPELTQKFNIRKDAFKQSTDSEEITEL 346
>gi|34555849|emb|CAA99786.2| Hypothetical protein C44H9.4
[Caenorhabditis elegans]
Length = 1099
Score = 683 bits (1763), Expect = 0.0
Identities = 428/1125 (38%), Positives = 624/1125 (55%), Gaps = 36/1125 (3%)
Frame = +1
Query: 1321 YTKKWYERIQEEISNIMIYPKALSTIYQYEEYTPNFVVEKQEQEEHPYQQDLEDLDLYRQ 1500
Y +Y R EE + + QY +T + K Q +++ +Y +
Sbjct: 26 YNNSYYRRDYEEEED---------DVQQY--HTSHIASIKSSQTTSYRSSVVQNSSVYSR 74
Query: 1501 --HEMQTNVFTKFF----DIGKSEKRKFG----PGKSISNCRHSDAIDFAAMSYIWKNIR 1650
E + N F+KF+ + +K+K K + + +HSDAI+FAA ++ W
Sbjct: 75 TFSEKEQNAFSKFYVQPPETNSRQKKKTEIESEVEKELKSYKHSDAINFAARTFSWGP-- 132
Query: 1651 QQHLPKLPKLPNMVLPLPTSMPLDSEICAFYRVLVENKSKYILIACHMNVHGYHRGDLRF 1830
+ PK P V ++ + I A++RVL +KYILIACH N+HG HRGDLRF
Sbjct: 133 NFNSPK----PRQVFRDISTYSYERGIRAYFRVLSAEDNKYILIACHANLHGLHRGDLRF 188
Query: 1831 LEINESTKLYGFEGRSVIGQLFLGDIVAVTELARCNGHGSDAFKIPFDVSMSSQNTCTWM 2010
+E+N+ T G E SVIG LF GD+VAVTEL++ + S A P ++S + C W
Sbjct: 189 VEVNDRTITKGSENYSVIGMLFPGDVVAVTELSKKSNAPSIA---PTIKNVSPHDPCIWE 245
Query: 2011 ASKITLPSRPPPASVLFSFMKNRMAVVKGCDEPMNVEVKSIQNVEPDLIYKGTAFKPEKP 2190
+K+ + R V F+ + N A+V+G E M+V + ++ D++Y GTAF PEK
Sbjct: 246 VNKMVVLQRKSIIRVNFAMLNNGAAIVEGHTEAMDVIEIDRKKLKTDMMYYGTAFIPEKS 305
Query: 2191 ELNFTEGFIKKKRHQIGSITLRIASYPNSFGTIYNFQESDIDNEHYKIGINAFSEEKFTE 2370
++ F+EGF ++ + ++T ++ SY NS GTIY + +KIG++AF+ ++
Sbjct: 306 KVKFSEGFHRQHWEDLMALTSKLPSYSNSLGTIYTHSLCERQTNMFKIGVDAFNSSIYS- 364
Query: 2371 ISLDEREKIVETCSLMGFSAANTIFNGRFDCRAFKMEEIKKNGMTVMFCIENPTSQPTLG 2550
++ + + + C +MG SAA T+ NGRFD R F+M I + F I+NP+ QPT G
Sbjct: 365 LNTEASVLVAQKCVIMGSSAAQTVSNGRFDGRNFQMTNIHRKSQNFRFSIDNPSKQPTEG 424
Query: 2551 LWCAGNRIVIGGPNGDVNGAIETVIDDPDIGYLRIAARLSRDIPKKFSFKGDGEFFVSQR 2730
W +I I G + +IETV+ + L I A + ++ K +F+ G + VSQ
Sbjct: 425 RWNPNQKIEINGQGESLKTSIETVVLGNNRKSLEITATIPKNNNKLLNFQ-TGTWIVSQS 483
Query: 2731 EVFENEILDDGYFKTLDPGCNGRRIIETLYGGKPLERVVVDKRDSSIERMMSQLFGVGSG 2910
+ E LD + + + P NGRRI+ LYGG P+
Sbjct: 484 QFLETPRLDCEFLQKMSPSSNGRRIVTALYGGSPINST--------------------GN 523
Query: 2911 ISEHKTSGKKSEDTPTQFYFPSTPEPLALNKYQCEYVQMLLDGNPLIIGSSPFGCGKSMT 3090
I+ +K QF FPS P+ LN+YQ +YV M+L G PLI+G+SPFGCGKSMT
Sbjct: 524 INWNK-----------QFEFPSKI-PIGLNQYQNQYVSMILSGVPLILGNSPFGCGKSMT 571
Query: 3091 IITAALELYKLKK-----NRKQLLITQSNYASVNLIDIAQRVCLSGDDDLKDLKFVRFVS 3255
I+TAA+EL K N++QLL+TQSN A VNLI+ A ++ ++F+R+VS
Sbjct: 572 IVTAAVELQKKYMRSESFNKQQLLVTQSNNAGVNLIEFALKL-----HKCDHIRFLRYVS 626
Query: 3256 EKNWNELPSNCRTDSDMPYLMNKLFKDWAMG-RIDLTNLTCLKTHHYVQMVSHIIKNDLV 3432
E NWN LP + +T+ DMP LM F +WA I N L +V +
Sbjct: 627 ESNWNSLPDSSKTELDMPILMEDEFFEWATNTEIQKENGENLTREMKKAIVEQSTQKYHC 686
Query: 3433 NPMLFGDHIAQIYDK-LSADFSRAPHAQTLVEAFFMIYKPDLVMVTADSAKGLL--NILR 3603
+L G+ +IY+ L P L EAFF +Y PD+++ TADS LL N+LR
Sbjct: 687 KGILVGE-AKRIYENILKNQREHKPSQAILKEAFFALYAPDIIVSTADSIHNLLENNVLR 745
Query: 3604 DVCAVQIDEASQLAECTLLGLLKSFNNASFGLIGDIHQLPPYCEEGLEGKLKDFGIGNTM 3783
DV +Q DEASQ+ E TL+ LL F NASFGL+GDI+QLP YC++ L+G LKD+GIG TM
Sbjct: 746 DVSNIQFDEASQVPEHTLISLLHKFPNASFGLVGDINQLPAYCDDDLQGLLKDYGIGKTM 805
Query: 3784 ERAIKEKMFPVCTLRNVYRCHPKTTELLSELFYDGALVSGVSELARSDFMTKRDDFWPNP 3963
RA ++KMFP LR VYRCHP TT++LS+LFY+G L+SGV + R +FM R D WPN
Sbjct: 806 ARASRDKMFPQSILRLVYRCHPTTTKILSDLFYNGQLISGVEKNQRDEFMRMRPDIWPNS 865
Query: 3964 KFPMMFVNNTGASTKMGTSTSNSSEKSIVGEIVQNLINDPRN-PVNPSDIGVISFYSAQT 4140
FP++ +N+ +MGTS +N+SEK V IV L + ++ SDIG+ISFY AQT
Sbjct: 866 SFPILVLNHEKDGYRMGTSVANNSEKDQVVRIVSLLTKKVKGYGLSESDIGIISFYKAQT 925
Query: 4141 SILTEHLRGSGVKCGTVDAFQGSEKEIIIMCSTNERISDFMQLSNRLNVAMSRAKQVTII 4320
S+L + L+ + VKCGT+DAFQG+E+E++I+C TN+ S FMQ R+NVAMSRA+Q TII
Sbjct: 926 SLLADALKKTDVKCGTIDAFQGTEREVMIVCCTNKNPSLFMQEGTRVNVAMSRARQATII 985
Query: 4321 IGHLDGLRRANYWSTI-----VNKIEQNGNLVNANDWYQNQ---------RRNKV--SLS 4452
IG++ L++A +W TI +NK + ++ Q Q + NK+ + +
Sbjct: 986 IGNIAKLKKAKHWDTIAQSAQINKCSMEVSTFGGSEQKQPQMVQIKCTAKKSNKIQKNQN 1045
Query: 4453 SYPLISTSRQSKQQRANEYNSQHKHVKRQSNNDYGSQRSVTNSLN 4587
IS S+ K + E +S+ + +R+ N + Q S N
Sbjct: 1046 EGKHISISQTVKTKEDTEQSSKPQQRRRRRNRNNIGQNSTNGRKN 1090
Score = 157 bits (398), Expect = 2e-36
Identities = 98/271 (36%), Positives = 147/271 (54%), Gaps = 8/271 (2%)
Frame = +1
Query: 619 EKSMNIFTKLF-----RGSQIRNKNDLPSG--RHLVNYRQNHAFDFAAMSHIWKENKMEN 777
EK N F+K + S+ + K ++ S + L +Y+ + A +FAA + W N N
Sbjct: 78 EKEQNAFSKFYVQPPETNSRQKKKTEIESEVEKELKSYKHSDAINFAARTFSWGPNF--N 135
Query: 778 LPKLPHRANLVMTLPSSRVRNSKICAFYRVLEKKEDKYILVACHVNIHGFHRGDLRFVEV 957
PK + T R I A++RVL +++KYIL+ACH N+HG HRGDLRFVEV
Sbjct: 136 SPKPRQVFRDISTYSYER----GIRAYFRVLSAEDNKYILIACHANLHGLHRGDLRFVEV 191
Query: 958 NNRTVLKGFERSSVIGHLFLGDILTVTELTRCNETVSNVASSVEDASPDAPCQWMASKVV 1137
N+RT+ KG E SVIG LF GD++ VTEL++ ++A ++++ SP PC W +K+V
Sbjct: 192 NDRTITKGSENYSVIGMLFPGDVVAVTELSK-KSNAPSIAPTIKNVSPHDPCIWEVNKMV 250
Query: 1138 LFPRHEPVNVQFKFTCNGMASVVSTNEPMSVILNNLTEAKTNVEYTGIAF-KSASYTVHT 1314
+ R + V F NG A V E M VI + + KT++ Y G AF S +
Sbjct: 251 VLQRKSIIRVNFAMLNNGAAIVEGHTEAMDVIEIDRKKLKTDMMYYGTAFIPEKSKVKFS 310
Query: 1315 EDYTKKWYERIQEEISNIMIYPKALSTIYQY 1407
E + ++ +E + S + Y +L TIY +
Sbjct: 311 EGFHRQHWEDLMALTSKLPSYSNSLGTIYTH 341
>gi|17558612|ref|NP_506213.1| regulator of nonsense transcripts family
member (5N319) [Caenorhabditis elegans]
gi|7497439|pir||T19948 hypothetical protein C44H9.4 - Caenorhabditis
elegans
Length = 1106
Score = 680 bits (1754), Expect = 0.0
Identities = 412/1043 (39%), Positives = 593/1043 (56%), Gaps = 20/1043 (1%)
Frame = +1
Query: 1321 YTKKWYERIQEEISNIMIYPKALSTIYQYEEYTPNFVVEKQEQEEHPYQQDLEDLDLYRQ 1500
Y +Y R EE + + QY +T + K Q +++ +Y +
Sbjct: 26 YNNSYYRRDYEEEED---------DVQQY--HTSHIASIKSSQTTSYRSSVVQNSSVYSR 74
Query: 1501 --HEMQTNVFTKFF----DIGKSEKRKFG----PGKSISNCRHSDAIDFAAMSYIWKNIR 1650
E + N F+KF+ + +K+K K + + +HSDAI+FAA ++ W
Sbjct: 75 TFSEKEQNAFSKFYVQPPETNSRQKKKTEIESEVEKELKSYKHSDAINFAARTFSWGP-- 132
Query: 1651 QQHLPKLPKLPNMVLPLPTSMPLDSEICAFYRVLVENKSKYILIACHMNVHGYHRGDLRF 1830
+ PK P V ++ + I A++RVL +KYILIACH N+HG HRGDLRF
Sbjct: 133 NFNSPK----PRQVFRDISTYSYERGIRAYFRVLSAEDNKYILIACHANLHGLHRGDLRF 188
Query: 1831 LEINESTKLYGFEGRSVIGQLFLGDIVAVTELARCNGHGSDAFKIPFDVSMSSQNTCTWM 2010
+E+N+ T G E SVIG LF GD+VAVTEL++ + S A P ++S + C W
Sbjct: 189 VEVNDRTITKGSENYSVIGMLFPGDVVAVTELSKKSNAPSIA---PTIKNVSPHDPCIWE 245
Query: 2011 ASKITLPSRPPPASVLFSFMKNRMAVVKGCDEPMNVEVKSIQNVEPDLIYKGTAFKPEKP 2190
+K+ + R V F+ + N A+V+G E M+V + ++ D++Y GTAF PEK
Sbjct: 246 VNKMVVLQRKSIIRVNFAMLNNGAAIVEGHTEAMDVIEIDRKKLKTDMMYYGTAFIPEKS 305
Query: 2191 ELNFTEGFIKKKRHQIGSITLRIASYPNSFGTIYNFQESDIDNEHYKIGINAFSEEKFTE 2370
++ F+EGF ++ + ++T ++ SY NS GTIY + +KIG++AF+ ++
Sbjct: 306 KVKFSEGFHRQHWEDLMALTSKLPSYSNSLGTIYTHSLCERQTNMFKIGVDAFNSSIYS- 364
Query: 2371 ISLDEREKIVETCSLMGFSAANTIFNGRFDCRAFKMEEIKKNGMTVMFCIENPTSQPTLG 2550
++ + + + C +MG SAA T+ NGRFD R F+M I + F I+NP+ QPT G
Sbjct: 365 LNTEASVLVAQKCVIMGSSAAQTVSNGRFDGRNFQMTNIHRKSQNFRFSIDNPSKQPTEG 424
Query: 2551 LWCAGNRIVIGGPNGDVNGAIETVIDDPDIGYLRIAARLSRDIPKKFSFKGDGEFFVSQR 2730
W +I I G + +IETV+ + L I A + ++ K +F+ G + VSQ
Sbjct: 425 RWNPNQKIEINGQGESLKTSIETVVLGNNRKSLEITATIPKNNNKLLNFQ-TGTWIVSQS 483
Query: 2731 EVFENEILDDGYFKTLDPGCNGRRIIETLYGGKPLERVVVDKRDSSIERMMSQLFGVGSG 2910
+ E LD + + + P NGRRI+ LYGG P+
Sbjct: 484 QFLETPRLDCEFLQKMSPSSNGRRIVTALYGGSPINST--------------------GN 523
Query: 2911 ISEHKTSGKKSEDTPTQFYFPSTPEPLALNKYQCEYVQMLLDGNPLIIGSSPFGCGKSMT 3090
I+ +K QF FPS P+ LN+YQ +YV M+L G PLI+G+SPFGCGKSMT
Sbjct: 524 INWNK-----------QFEFPSKI-PIGLNQYQNQYVSMILSGVPLILGNSPFGCGKSMT 571
Query: 3091 IITAALELYKLKK-----NRKQLLITQSNYASVNLIDIAQRVCLSGDDDLKDLKFVRFVS 3255
I+TAA+EL K N++QLL+TQSN A VNLI+ A ++ ++F+R+VS
Sbjct: 572 IVTAAVELQKKYMRSESFNKQQLLVTQSNNAGVNLIEFALKL-----HKCDHIRFLRYVS 626
Query: 3256 EKNWNELPSNCRTDSDMPYLMNKLFKDWAMG-RIDLTNLTCLKTHHYVQMVSHIIKNDLV 3432
E NWN LP + +T+ DMP LM F +WA I N L +V +
Sbjct: 627 ESNWNSLPDSSKTELDMPILMEDEFFEWATNTEIQKENGENLTREMKKAIVEQSTQKYHC 686
Query: 3433 NPMLFGDHIAQIYDK-LSADFSRAPHAQTLVEAFFMIYKPDLVMVTADSAKGLL--NILR 3603
+L G+ +IY+ L P L EAFF +Y PD+++ TADS LL N+LR
Sbjct: 687 KGILVGE-AKRIYENILKNQREHKPSQAILKEAFFALYAPDIIVSTADSIHNLLENNVLR 745
Query: 3604 DVCAVQIDEASQLAECTLLGLLKSFNNASFGLIGDIHQLPPYCEEGLEGKLKDFGIGNTM 3783
DV +Q DEASQ+ E TL+ LL F NASFGL+GDI+QLP YC++ L+G LKD+GIG TM
Sbjct: 746 DVSNIQFDEASQVPEHTLISLLHKFPNASFGLVGDINQLPAYCDDDLQGLLKDYGIGKTM 805
Query: 3784 ERAIKEKMFPVCTLRNVYRCHPKTTELLSELFYDGALVSGVSELARSDFMTKRDDFWPNP 3963
RA ++KMFP LR VYRCHP TT++LS+LFY+G L+SGV + R +FM R D WPN
Sbjct: 806 ARASRDKMFPQSILRLVYRCHPTTTKILSDLFYNGQLISGVEKNQRDEFMRMRPDIWPNS 865
Query: 3964 KFPMMFVNNTGASTKMGTSTSNSSEKSIVGEIVQNLINDPRN-PVNPSDIGVISFYSAQT 4140
FP++ +N+ +MGTS +N+SEK V IV L + ++ SDIG+ISFY AQT
Sbjct: 866 SFPILVLNHEKDGYRMGTSVANNSEKDQVVRIVSLLTKKVKGYGLSESDIGIISFYKAQT 925
Query: 4141 SILTEHLRGSGVKCGTVDAFQGSEKEIIIMCSTNERISDFMQLSNRLNVAMSRAKQVTII 4320
S+L + L+ + VKCGT+DAFQG+E+E++I+C TN+ S FMQ R+NVAMSRA+Q TII
Sbjct: 926 SLLADALKKTDVKCGTIDAFQGTEREVMIVCCTNKNPSLFMQEGTRVNVAMSRARQATII 985
Query: 4321 IGHLDGLRRANYWSTIVNKIEQN 4389
IG++ L++A +W TI + N
Sbjct: 986 IGNIAKLKKAKHWDTIAQSAQIN 1008
Score = 157 bits (398), Expect = 2e-36
Identities = 98/271 (36%), Positives = 147/271 (54%), Gaps = 8/271 (2%)
Frame = +1
Query: 619 EKSMNIFTKLF-----RGSQIRNKNDLPSG--RHLVNYRQNHAFDFAAMSHIWKENKMEN 777
EK N F+K + S+ + K ++ S + L +Y+ + A +FAA + W N N
Sbjct: 78 EKEQNAFSKFYVQPPETNSRQKKKTEIESEVEKELKSYKHSDAINFAARTFSWGPNF--N 135
Query: 778 LPKLPHRANLVMTLPSSRVRNSKICAFYRVLEKKEDKYILVACHVNIHGFHRGDLRFVEV 957
PK + T R I A++RVL +++KYIL+ACH N+HG HRGDLRFVEV
Sbjct: 136 SPKPRQVFRDISTYSYER----GIRAYFRVLSAEDNKYILIACHANLHGLHRGDLRFVEV 191
Query: 958 NNRTVLKGFERSSVIGHLFLGDILTVTELTRCNETVSNVASSVEDASPDAPCQWMASKVV 1137
N+RT+ KG E SVIG LF GD++ VTEL++ ++A ++++ SP PC W +K+V
Sbjct: 192 NDRTITKGSENYSVIGMLFPGDVVAVTELSK-KSNAPSIAPTIKNVSPHDPCIWEVNKMV 250
Query: 1138 LFPRHEPVNVQFKFTCNGMASVVSTNEPMSVILNNLTEAKTNVEYTGIAF-KSASYTVHT 1314
+ R + V F NG A V E M VI + + KT++ Y G AF S +
Sbjct: 251 VLQRKSIIRVNFAMLNNGAAIVEGHTEAMDVIEIDRKKLKTDMMYYGTAFIPEKSKVKFS 310
Query: 1315 EDYTKKWYERIQEEISNIMIYPKALSTIYQY 1407
E + ++ +E + S + Y +L TIY +
Sbjct: 311 EGFHRQHWEDLMALTSKLPSYSNSLGTIYTH 341