Homology by BLASTX


BLASTX 2.2.4 [Aug-26-2002]
Query= C05C10_2
         (4662 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|17531513|ref|NP_496141.1| regulator of nonsense transcripts f...  3073   0.0
gi|17531515|ref|NP_496142.1| regulator of nonsense transcripts f...  3063   0.0
gi|39589213|emb|CAE57946.1| Hypothetical protein CBG01003 [Caeno...  1215   0.0
gi|39579679|emb|CAE56511.1| Hypothetical protein CBG24231 [Caeno...   791   0.0
gi|39579473|emb|CAE56882.1| Hypothetical protein CBG24721 [Caeno...   729   0.0
gi|39582377|emb|CAE74761.1| Hypothetical protein CBG22588 [Caeno...   716   0.0
gi|34555849|emb|CAA99786.2| Hypothetical protein C44H9.4 [Caenor...   683   0.0
gi|17558612|ref|NP_506213.1| regulator of nonsense transcripts f...   680   0.0
gi|39585742|emb|CAE59944.1| Hypothetical protein CBG03431 [Caeno...   556   e-156
gi|17558610|ref|NP_506212.1| predicted CDS, putative cytoplasmic...   496   e-138
gi|17541326|ref|NP_500503.1| predicted CDS, putative cytoplasmic...   162   7e-38
gi|39579637|emb|CAE56861.1| Hypothetical protein CBG24691 [Caeno...   157   2e-36
gi|17535407|ref|NP_496354.1| putative nuclear protein family mem...   127   2e-27
gi|32405938|ref|XP_323582.1| hypothetical protein ( (AL451022) p...   119   7e-25
gi|39583772|emb|CAE74845.1| Hypothetical protein CBG22691 [Caeno...   118   2e-24
gi|50746881|ref|XP_426326.1| PREDICTED: similar to prematurely t...   117   2e-24
gi|23507861|ref|NP_700531.1| regulator of nonsense transcripts, ...   117   3e-24
gi|50303751|ref|XP_451821.1| unnamed protein product [Kluyveromy...   116   6e-24
gi|17380277|sp|O76512|RNT1_CAEEL Regulator of nonsense transcrip...   115   8e-24
gi|17510163|ref|NP_490829.1| suppressor with Morphological effec...   115   1e-23
gi|46136829|ref|XP_390106.1| RNT1_NEUCR Regulator of nonsense tr...   114   2e-23
gi|38016158|ref|NP_619643.2| prematurely terminated mRNA decay f...   114   3e-23
gi|39582603|emb|CAE63922.1| Hypothetical protein CBG08494 [Caeno...   114   3e-23
gi|49085300|ref|XP_404783.1| hypothetical protein AN0646.2 [Aspe...   113   5e-23
gi|26338079|dbj|BAC32725.1| unnamed protein product [Mus musculus]    112   6e-23
gi|50422551|ref|XP_459847.1| unnamed protein product [Debaryomyc...   112   8e-23
gi|19577367|emb|CAD28448.1| possible regulator of nonsense trans...   110   3e-22
gi|42820708|emb|CAF32021.1| regulator of nonsense transcripts, p...   110   3e-22
gi|50286349|ref|XP_445603.1| unnamed protein product [Candida gl...   110   3e-22
gi|38102483|gb|EAA49318.1| hypothetical protein MG00976.4 [Magna...   110   4e-22
gi|50259177|gb|EAL21852.1| hypothetical protein CNBC4250 [Crypto...   110   4e-22
gi|50551471|ref|XP_503209.1| hypothetical protein [Yarrowia lipo...   110   4e-22
gi|23485801|gb|EAA20580.1| nonsense mRNA reducing factor 1-relat...   109   7e-22
gi|6323726|ref|NP_013797.1| Component of the nonsense-mediated m...   108   2e-21
gi|49067124|ref|XP_397852.1| hypothetical protein UM00237.1 [Ust...   107   3e-21
gi|15220521|ref|NP_172037.1| RNA helicase SDE3 (SDE3) [Arabidops...   107   3e-21
gi|13811296|gb|AAK40099.1| RNA helicase SDE3 [Arabidopsis thaliana]   107   3e-21
gi|46438461|gb|EAK97791.1| hypothetical protein CaO19.939 [Candi...   107   3e-21
gi|25406843|pir||C86189 protein T25N20.11 [imported] - Arabidops...   107   3e-21
gi|34859985|ref|XP_227717.2| similar to hypothetical protein FLJ...   105   8e-21
gi|1885356|gb|AAC51140.1| type 1 RNA helicase pNORF1                  104   2e-20
gi|17380291|sp|Q92900|RNT1_HUMAN Regulator of nonsense transcrip...   103   5e-20
gi|18375673|ref|NP_002902.2| regulator of nonsense transcripts 1...   103   5e-20
gi|47087327|ref|NP_998639.1| regulator of nonsense transcripts 1...   103   5e-20
gi|49116641|gb|AAH73441.1| Unknown (protein for MGC:80941) [Xeno...   103   5e-20
gi|40788920|dbj|BAA19664.2| KIAA0221 [Homo sapiens]                   103   5e-20
gi|50761112|ref|XP_418237.1| PREDICTED: similar to regulator of ...   103   5e-20
gi|47216421|emb|CAG01972.1| unnamed protein product [Tetraodon n...   103   5e-20
gi|15221015|ref|NP_172361.1| DNA replication helicase, putative ...   102   9e-20
gi|18859757|ref|NP_572767.1| CG1559-PA [Drosophila melanogaster]...   102   1e-19
gi|2130283|pir||S62476 hypothetical protein SPAC16C9.06c - fissi...   102   1e-19
gi|19113992|ref|NP_593080.1| putative regulator of nonsense tran...   102   1e-19
gi|45185251|ref|NP_982968.1| ABR022Cp [Eremothecium gossypii] >g...   101   1e-19
gi|33989570|gb|AAH56442.1| Rent1 protein [Mus musculus]               101   1e-19
gi|38089666|ref|XP_356130.1| similar to regulator of nonsense tr...   101   1e-19
gi|13507601|ref|NP_109605.1| regulator of nonsense transcripts 1...   101   1e-19
gi|11359050|pir||T51292 Dna2p - fission yeast (Schizosaccharomyc...   101   2e-19
gi|19569060|gb|AAL92018.1| UPF1 [Arabidopsis thaliana]                101   2e-19
gi|30695086|ref|NP_199512.2| RNA helicase, putative [Arabidopsis...   101   2e-19
gi|19113291|ref|NP_596499.1| dna replication helicase [Schizosac...   101   2e-19
gi|18202906|sp|Q9FJR0|RNT1_ARATH Regulator of nonsense transcrip...   101   2e-19
gi|11359934|pir||T46441 hypothetical protein DKFZp434C0927.1 - h...   100   3e-19
gi|49071376|ref|XP_399977.1| hypothetical protein UM02362.1 [Ust...   100   4e-19
gi|1575536|gb|AAC50771.1| regulator of nonsense transcript stabi...   100   6e-19
gi|31243165|ref|XP_322028.1| ENSANGP00000004153 [Anopheles gambi...    99   7e-19
gi|48727634|gb|AAT46119.1| RENT1 [Mus musculus]                        99   7e-19
gi|18202669|sp|Q98TR3|RNT1_FUGRU Putative regulator of nonsense ...    99   7e-19
gi|21410895|gb|AAH30916.1| Rent1 protein [Mus musculus]                99   1e-18
gi|50256219|gb|EAL18946.1| hypothetical protein CNBI2070 [Crypto...    99   1e-18
gi|20987322|gb|AAH30185.1| 4930422G04Rik protein [Mus musculus]        97   3e-18
gi|28573498|ref|NP_611185.2| CG6967-PA [Drosophila melanogaster]...    97   5e-18
gi|28573499|ref|NP_725650.2| CG6967-PB [Drosophila melanogaster]...    97   5e-18
gi|48132934|ref|XP_393330.1| similar to ENSANGP00000004153 [Apis...    96   8e-18
gi|47217411|emb|CAG00771.1| unnamed protein product [Tetraodon n...    95   1e-17
gi|50509972|dbj|BAD30435.1| putative type 1 RNA helicase [Oryza ...    93   5e-17
gi|34901794|ref|NP_912243.1| putaitive UPF1 [Oryza sativa (japon...    93   5e-17
gi|50293955|ref|XP_449389.1| unnamed protein product [Candida gl...    92   9e-17
gi|50603852|gb|AAH78166.1| Unknown (protein for IMAGE:6178156) [...    92   1e-16
gi|17402235|emb|CAD13341.1| bA479K20.2 (KIAA0625 protein) [Homo ...    92   1e-16
gi|37572251|gb|AAH32622.1| KIAA0625 protein [Homo sapiens]             92   1e-16
gi|34327966|dbj|BAA31600.2| KIAA0625 protein [Homo sapiens]            92   1e-16
gi|38195410|gb|AAR13367.1| ataxia/oculomotor apraxia protein 2 [...    92   1e-16
gi|37620159|ref|NP_055861.2| KIAA0625 protein [Homo sapiens] >gn...    92   1e-16
gi|7022724|dbj|BAA91701.1| unnamed protein product [Homo sapiens...    92   1e-16
gi|17533987|ref|NP_496516.1| yeast DNA helicase/endonuclease fam...    92   2e-16
gi|17533985|ref|NP_496515.1| yeast DNA helicase/endonuclease fam...    92   2e-16
gi|50254922|gb|EAL17662.1| hypothetical protein CNBL1770 [Crypto...    91   2e-16
gi|34896974|ref|NP_909833.1| putative component of a tRNA splici...    91   3e-16
gi|15607027|ref|NP_214409.1| DNA helicase [Aquifex aeolicus VF5]...    91   3e-16
gi|50749284|ref|XP_421569.1| PREDICTED: similar to DNA2-like hom...    90   5e-16
gi|19704777|ref|NP_604339.1| DNA helicase [Fusobacterium nucleat...    89   8e-16
gi|11498984|ref|NP_070217.1| DNA helicase, putative [Archaeoglob...    89   8e-16
gi|37536462|ref|NP_922533.1| putative helicase [Oryza sativa (ja...    89   1e-15
gi|37574140|ref|NP_932150.1| expressed sequence AW060766 [Mus mu...    89   1e-15
gi|42475934|tpg|DAA01946.1| TPA: senataxin; DEAxQ-box helicase; ...    89   1e-15
gi|28386070|gb|AAH46382.1| AW060766 protein [Mus musculus]             89   1e-15
gi|39597465|emb|CAE59695.1| Hypothetical protein CBG03123 [Caeno...    88   2e-15
gi|24660647|ref|NP_648177.1| CG7504-PA [Drosophila melanogaster]...    87   3e-15
gi|45359144|ref|NP_988701.1| putative DNA helicase [Methanococcu...    87   3e-15
gi|34853159|ref|XP_342401.1| similar to hypothetical protein [Ra...    87   4e-15
gi|29247037|gb|EAA38613.1| GLP_226_38825_42739 [Giardia lamblia ...    87   5e-15
gi|29248662|gb|EAA40191.1| GLP_393_59373_57169 [Giardia lamblia ...    87   5e-15
gi|18845092|gb|AAL79550.1| helicase [Xenopus laevis]                   86   1e-14
gi|6321024|ref|NP_011103.1| DNA dependent ATPase/DNA helicase be...    86   1e-14
gi|15642780|ref|NP_227821.1| DNA helicase, putative [Thermotoga ...    85   1e-14
gi|50554637|ref|XP_504727.1| hypothetical protein [Yarrowia lipo...    84   2e-14
gi|19115031|ref|NP_594119.1| DNA2-NAM7 helicase family protein [...    84   3e-14
gi|32487796|emb|CAE05419.1| OSJNBa0035I04.7 [Oryza sativa (japon...    84   4e-14
gi|19112847|ref|NP_596055.1| tRNA-splicing endonuclease positive...    83   7e-14
gi|39589605|emb|CAE66840.1| Hypothetical protein CBG12210 [Caeno...    83   7e-14
gi|50757261|ref|XP_415453.1| PREDICTED: similar to KIAA0625 prot...    82   9e-14
gi|50289833|ref|XP_447348.1| unnamed protein product [Candida gl...    82   1e-13
gi|34852480|ref|XP_241671.2| similar to DNA2-like homolog (DNA r...    82   1e-13
gi|21711689|gb|AAM75035.1| LD17208p [Drosophila melanogaster]          82   2e-13
gi|6322835|ref|NP_012908.1| Hexameric DNA polymerase alpha-assoc...    82   2e-13
gi|38346797|emb|CAD41365.2| OSJNBa0088A01.4 [Oryza sativa (japon...    82   2e-13
gi|50302599|ref|XP_451235.1| unnamed protein product [Kluyveromy...    82   2e-13
gi|45550425|ref|NP_610920.2| CG6701-PA [Drosophila melanogaster]...    82   2e-13
gi|42566850|ref|NP_193292.3| tRNA-splicing endonuclease positive...    81   2e-13
gi|45201204|ref|NP_986774.1| AGR108Cp [Eremothecium gossypii] >g...    81   2e-13
gi|7485995|pir||T00740 hypothetical protein F22O13.35 - Arabidop...    81   3e-13
gi|2340994|gb|AAB67523.1| Sen1p [Saccharomyces cerevisiae]             80   4e-13
gi|172574|gb|AAB63976.1| SEN1 [Saccharomyces cerevisiae]               80   4e-13
gi|6323462|ref|NP_013534.1| Nuclear protein, putative helicase r...    80   4e-13
gi|50303681|ref|XP_451783.1| unnamed protein product [Kluyveromy...    80   5e-13
gi|19483918|gb|AAH25182.1| Unknown (protein for IMAGE:5035239) [...    80   5e-13
gi|32414403|ref|XP_327681.1| hypothetical protein [Neurospora cr...    80   6e-13
gi|15219364|ref|NP_173124.1| tRNA-splicing endonuclease positive...    80   6e-13
gi|25518059|pir||D86303 F17F16.1 protein - Arabidopsis thaliana ...    80   6e-13
gi|42734059|gb|AAS38931.1| similar to Rattus norvegicus (Rat). A...    80   6e-13
gi|37359766|dbj|BAC97861.1| mKIAA0083 protein [Mus musculus]           79   8e-13
gi|46849783|ref|NP_796346.1| RIKEN cDNA E130315B21 gene [Mus mus...    79   8e-13
gi|20380180|gb|AAH28188.1| Unknown (protein for IMAGE:4385301) [...    79   8e-13
gi|38090494|ref|XP_125654.4| RIKEN cDNA E130315B21 gene [Mus mus...    79   8e-13
gi|37530612|ref|NP_919608.1| putative DNA2-NAM7 helicase family ...    79   8e-13
gi|10177999|dbj|BAB11372.1| unnamed protein product [Arabidopsis...    79   8e-13
gi|15240128|ref|NP_198531.1| tRNA-splicing endonuclease positive...    79   1e-12
gi|31657176|gb|AAH53574.1| DNA2L protein [Homo sapiens]                79   1e-12
gi|34783461|gb|AAH41115.1| DNA2L protein [Homo sapiens]                79   1e-12
gi|41149313|ref|XP_166103.3| DNA2 DNA replication helicase 2-lik...    79   1e-12
gi|2506893|sp|P51530|DN2L_HUMAN DNA2-like homolog (DNA replicati...    79   1e-12
gi|50413921|ref|XP_457339.1| unnamed protein product [Debaryomyc...    79   1e-12
gi|49072214|ref|XP_400396.1| hypothetical protein UM02781.1 [Ust...    79   1e-12
gi|20093510|ref|NP_613357.1| Superfamily I DNA/RNA helicase [Met...    78   2e-12
gi|47218708|emb|CAG05680.1| unnamed protein product [Tetraodon n...    77   3e-12
gi|15242273|ref|NP_200022.1| tRNA-splicing endonuclease positive...    77   4e-12
gi|9758526|dbj|BAB08973.1| unnamed protein product [Arabidopsis ...    77   4e-12
gi|50546118|ref|XP_500586.1| hypothetical protein [Yarrowia lipo...    77   4e-12
gi|15239483|ref|NP_198519.1| tRNA-splicing endonuclease positive...    77   4e-12
gi|15645075|ref|NP_207245.1| conserved hypothetical protein [Hel...    77   5e-12
gi|50404879|ref|YP_053971.1| TRNA-splicing endonuclease positive...    77   5e-12
gi|46135987|ref|XP_389685.1| hypothetical protein FG09509.1 [Gib...    77   5e-12
gi|27660592|ref|XP_227549.1| similar to Potentail helicase MOV-1...    76   7e-12
gi|32471647|ref|NP_864640.1| DNA-binding protein SMUBP-2 [Pirell...    76   7e-12
gi|45190389|ref|NP_984643.1| AEL218Wp [Eremothecium gossypii] >g...    76   7e-12
gi|17510845|ref|NP_492670.1| putative protein of ancient origin ...    76   7e-12
gi|15218807|ref|NP_176757.1| tRNA-splicing endonuclease positive...    76   9e-12
gi|50511033|dbj|BAD32502.1| mKIAA1631 protein [Mus musculus]           76   9e-12
gi|6678920|ref|NP_032645.1| Moloney leukemia virus 10 [Mus muscu...    76   9e-12
gi|50403726|sp|P23249|MV10_MOUSE Potential helicase MOV-10 (Molo...    76   9e-12
gi|50426495|ref|XP_461844.1| unnamed protein product [Debaryomyc...    76   9e-12
gi|31240439|ref|XP_320633.1| ENSANGP00000021264 [Anopheles gambi...    75   1e-11
gi|13812387|ref|NP_113505.1| sen1 [Guillardia theta] >gnl|BL_ORD...    75   1e-11
gi|11499542|ref|NP_070784.1| DNA helicase, putative [Archaeoglob...    75   1e-11
gi|46433687|gb|EAK93119.1| hypothetical protein CaO19.1192 [Cand...    75   1e-11
gi|46133873|ref|XP_389252.1| hypothetical protein FG09076.1 [Gib...    75   2e-11
gi|38100409|gb|EAA47541.1| hypothetical protein MG02784.4 [Magna...    75   2e-11
gi|32266524|ref|NP_860556.1| conserved hypothetical protein [Hel...    75   2e-11
gi|32488773|emb|CAE04326.1| OSJNBb0016D16.17 [Oryza sativa (japo...    75   2e-11
gi|45190721|ref|NP_984975.1| AER115Wp [Eremothecium gossypii] >g...    74   3e-11
gi|10178000|dbj|BAB11373.1| unnamed protein product [Arabidopsis...    74   3e-11
gi|15240130|ref|NP_198532.1| tRNA-splicing endonuclease positive...    74   3e-11
gi|24214798|ref|NP_712279.1| putative helicase [Leptospira inter...    74   4e-11
gi|31199739|ref|XP_308817.1| ENSANGP00000021787 [Anopheles gambi...    74   4e-11
gi|50728098|ref|XP_415982.1| PREDICTED: similar to MOV10-like 1;...    74   4e-11
gi|50251911|dbj|BAD27849.1| tRNA-splicing endonuclease positive ...    73   6e-11
gi|18976944|ref|NP_578301.1| dna2-nam7 helicase family protein [...    73   6e-11
gi|10177997|dbj|BAB11370.1| unnamed protein product [Arabidopsis...    73   6e-11
gi|38075259|ref|XP_130703.4| expressed sequence AI481105 [Mus mu...    73   6e-11
gi|14520327|ref|NP_125802.1| dna helicase related protein [Pyroc...    73   6e-11
gi|15668275|ref|NP_247068.1| DNA-binding protein, probably DNA h...    73   7e-11
gi|15679629|ref|NP_276746.1| transcriptional control factor (enh...    73   7e-11
gi|45657684|ref|YP_001770.1| conserved hypothetical protein [Lep...    73   7e-11
gi|23612667|ref|NP_704228.1| regulator of nonsense transcripts 1...    73   7e-11
gi|19074775|ref|NP_586281.1| INVOLVED IN mRNA DECAY CONTROL (DNA...    73   7e-11
gi|23612437|ref|NP_703998.1| erythrocyte membrane-associated ant...    73   7e-11
gi|14590762|ref|NP_142832.1| DNA-binding protein [Pyrococcus hor...    72   1e-10
gi|23126434|ref|ZP_00108330.1| COG1112: Superfamily I DNA and RN...    72   1e-10
gi|29347483|ref|NP_810986.1| putative helicase [Bacteroides thet...    72   1e-10
gi|14521437|ref|NP_126913.1| DNA helicase, putative [Pyrococcus ...    72   1e-10
gi|23481586|gb|EAA17820.1| nam7 protein [Plasmodium yoelii yoelii]     72   2e-10
gi|15790495|ref|NP_280319.1| DNA helicase; Hel [Halobacterium sp...    72   2e-10
gi|50758737|ref|XP_417395.1| PREDICTED: similar to Protein KIAA1...    71   2e-10
gi|25407348|pir||F85069 hypothetical protein AT4g05540 [imported...    71   2e-10
gi|24649577|ref|NP_651229.2| CG6204-PA [Drosophila melanogaster]...    71   2e-10
gi|46445015|gb|EAL04286.1| hypothetical protein CaO19.13359 [Can...    71   2e-10
gi|42566323|ref|NP_567301.2| tRNA-splicing endonuclease positive...    71   2e-10
gi|23509024|ref|NP_701692.1| hypothetical protein [Plasmodium fa...    71   2e-10
gi|49092658|ref|XP_407790.1| hypothetical protein AN3653.2 [Aspe...    71   2e-10
gi|34860727|ref|XP_230878.2| similar to Ab1-133 [Rattus norvegicus]    71   3e-10
gi|33086460|gb|AAP92542.1| Ab1-133 [Rattus norvegicus]                 71   3e-10
gi|7465203|pir||D64588 probable DNA helicase - Helicobacter pylo...    71   3e-10
gi|39645033|gb|AAH04499.2| MOV10 protein [Homo sapiens]                71   3e-10
gi|14211540|ref|NP_066014.1| Mov10, Moloney leukemia virus 10, h...    71   3e-10
gi|10047339|dbj|BAB13457.1| KIAA1631 protein [Homo sapiens]            71   3e-10
gi|46433099|gb|EAK92553.1| hypothetical protein CaO19.702 [Candi...    71   3e-10
gi|50293567|ref|XP_449195.1| unnamed protein product [Candida gl...    71   3e-10
gi|16183177|gb|AAL13650.1| GH20028p [Drosophila melanogaster]          70   4e-10
gi|38638833|gb|AAC48142.2| Hypothetical protein C41D11.7 [Caenor...    70   5e-10
gi|15240114|ref|NP_198530.1| tRNA-splicing endonuclease positive...    70   5e-10
gi|17505965|ref|NP_491374.1| DEAD/DEAH box helicase (1F20) [Caen...    70   5e-10
gi|14590057|ref|NP_142121.1| hypothetical protein PH0109 [Pyroco...    70   5e-10
gi|50309513|ref|XP_454766.1| unnamed protein product [Kluyveromy...    70   5e-10
gi|15827541|ref|NP_301804.1| conserved hypothetical protein [Myc...    70   5e-10
gi|49127739|ref|XP_412808.1| hypothetical protein AN8671.2 [Aspe...    70   6e-10
gi|50399951|gb|AAT76339.1| putative DNA helicase [Oryza sativa (...    70   6e-10
gi|16329815|ref|NP_440543.1| unknown protein [Synechocystis sp. ...    70   6e-10
gi|38346803|emb|CAD41371.2| OSJNBa0088A01.10 [Oryza sativa (japo...    70   6e-10
gi|18395518|ref|NP_565299.1| DNA-binding protein, putative [Arab...    69   8e-10
gi|7446669|pir||T02699 probable helicase At2g03270 [imported] - ...    69   8e-10
gi|11191231|emb|CAC16347.1| putative helicase [Arabidopsis thali...    69   8e-10
gi|28626521|ref|NP_066363.1| KIAA1404 protein [Homo sapiens] >gn...    69   8e-10
gi|7243189|dbj|BAA92642.1| KIAA1404 protein [Homo sapiens]             69   8e-10
gi|10435893|dbj|BAB14696.1| unnamed protein product [Homo sapiens]     69   8e-10
gi|38108498|gb|EAA54506.1| hypothetical protein MG02491.4 [Magna...    69   1e-09
gi|50256678|gb|EAL19401.1| hypothetical protein CNBH0940 [Crypto...    69   1e-09
gi|47209162|emb|CAF90337.1| unnamed protein product [Tetraodon n...    69   1e-09
gi|50760387|ref|XP_417999.1| PREDICTED: similar to Potentail hel...    69   1e-09
gi|28828549|gb|AAO51157.1| similar to Neurospora crassa. Related...    69   1e-09
gi|46128545|ref|XP_388826.1| hypothetical protein FG08650.1 [Gib...    69   1e-09
gi|50425695|ref|XP_461444.1| unnamed protein product [Debaryomyc...    68   2e-09
gi|25404948|pir||C96682 protein F1E22.16 [imported] - Arabidopsi...    68   2e-09
gi|25466295|pir||T52521 related to SEN1 protein [imported] - Neu...    67   3e-09
gi|32417496|ref|XP_329226.1| related to SEN1 protein [MIPS] [Neu...    67   4e-09
gi|29349512|ref|NP_813015.1| DNA helicase [Bacteroides thetaiota...    67   4e-09
gi|908917|gb|AAA70430.1| DNA helicase [Homo sapiens]                   67   5e-09
gi|15608391|ref|NP_215767.1| hypothetical protein Rv1251c [Mycob...    67   5e-09
gi|15840697|ref|NP_335734.1| hypothetical protein [Mycobacterium...    67   5e-09
gi|2498040|sp|Q60560|SMB2_MESAU DNA-binding protein SMUBP-2 (Imm...    67   5e-09
gi|19075869|ref|NP_588369.1| putative dna-binding protein [Schiz...    67   5e-09
gi|15224719|ref|NP_179502.1| tRNA-splicing endonuclease positive...    67   5e-09
gi|39595360|emb|CAE60397.1| Hypothetical protein CBG03999 [Caeno...    66   7e-09
gi|50423331|ref|XP_460248.1| unnamed protein product [Debaryomyc...    66   7e-09
gi|39594138|emb|CAE70248.1| Hypothetical protein CBG16740 [Caeno...    66   7e-09
gi|46440489|gb|EAK99794.1| hypothetical protein CaO19.13579 [Can...    66   9e-09
gi|46110813|ref|XP_382464.1| hypothetical protein FG02288.1 [Gib...    66   9e-09
gi|20270921|gb|AAM18477.1| VHSV-induced protein [Oncorhynchus my...    65   1e-08
gi|45509666|ref|ZP_00161999.1| COG1112: Superfamily I DNA and RN...    65   1e-08
gi|41408631|ref|NP_961467.1| hypothetical protein MAP2533 [Mycob...    65   1e-08
gi|48891775|ref|ZP_00325241.1| COG1112: Superfamily I DNA and RN...    65   1e-08
gi|15790999|ref|NP_280823.1| DNA binding protein eukaryotic-like...    65   2e-08
gi|15234617|ref|NP_194739.1| tRNA-splicing endonuclease positive...    65   2e-08
gi|13928794|ref|NP_113774.1| immunoglobulin mu binding protein 2...    65   2e-08
gi|49111123|ref|XP_411789.1| hypothetical protein AN7652.2 [Aspe...    65   2e-08
gi|4504623|ref|NP_002171.1| immunoglobulin mu binding protein 2;...    65   2e-08
gi|1082534|pir||A47500 Ig mu chain switch region binding protein...    65   2e-08
gi|45185590|ref|NP_983306.1| ACL098Cp [Eremothecium gossypii] >g...    64   3e-08
gi|46913207|emb|CAG19995.1| hypothetical protein [Photobacterium...    64   3e-08
gi|47222854|emb|CAF96521.1| unnamed protein product [Tetraodon n...    64   5e-08
gi|31979229|gb|AAP60176.1| cardiac specific isoform of Mov10 lik...    64   5e-08
gi|13994127|ref|NP_112550.1| Moloney leukemia virus 10-like 1 [M...    64   5e-08
gi|26351285|dbj|BAC39279.1| unnamed protein product [Mus musculus]     64   5e-08
gi|15004351|gb|AAK77049.1| cardiac-specific RNA helicase [Mus mu...    64   5e-08
gi|23508274|ref|NP_700943.1| hypothetical protein [Plasmodium fa...    63   6e-08
gi|48834207|ref|ZP_00291222.1| COG1112: Superfamily I DNA and RN...    63   8e-08
gi|49077606|ref|XP_402643.1| hypothetical protein UM05028.1 [Ust...    63   8e-08
gi|15218803|ref|NP_176754.1| tRNA-splicing endonuclease positive...    62   1e-07
gi|25404947|pir||B96682 protein F1E22.14 [imported] - Arabidopsi...    62   1e-07
gi|34557480|ref|NP_907295.1| ATP-BINDING PROTEIN [Wolinella succ...    62   1e-07
gi|6321958|ref|NP_012034.1| Essential tripartite DNA replication...    62   2e-07
gi|38101942|gb|EAA48840.1| hypothetical protein MG00498.4 [Magna...    62   2e-07
gi|48831471|ref|ZP_00288534.1| COG1112: Superfamily I DNA and RN...    61   2e-07
gi|48853892|ref|ZP_00308057.1| COG1112: Superfamily I DNA and RN...    61   2e-07
gi|34877805|ref|XP_224732.2| similar to regulator of nonsense tr...    61   3e-07
gi|39589134|emb|CAE57867.1| Hypothetical protein CBG00906 [Caeno...    60   4e-07
gi|50293759|ref|XP_449291.1| unnamed protein product [Candida gl...    60   4e-07
gi|32492200|emb|CAE03468.1| OSJNBa0083N12.5 [Oryza sativa (japon...    60   5e-07
gi|23482362|gb|EAA18365.1| hypothetical protein [Plasmodium yoel...    60   5e-07
gi|28830027|gb|AAO52517.1| similar to Homo sapiens (Human). Prot...    60   5e-07
gi|32407005|ref|XP_324106.1| hypothetical protein [Neurospora cr...    60   7e-07
gi|40882306|emb|CAF06129.1| related to DNA helicase [Neurospora ...    60   7e-07
gi|42490896|gb|AAH66215.1| Ighmbp2 protein [Mus musculus]              59   9e-07
gi|33592453|ref|NP_880097.1| conserved hypothetical protein [Bor...    59   9e-07
gi|41053136|dbj|BAD08079.1| putative DNA helicase [Oryza sativa ...    59   9e-07
gi|31215066|ref|XP_315956.1| ENSANGP00000013515 [Anopheles gambi...    59   1e-06
gi|33601805|ref|NP_889365.1| conserved hypothetical protein [Bor...    59   1e-06
gi|19173651|ref|NP_597454.1| similarity to HYPOTHETICAL ZINC FIN...    59   1e-06
gi|46124979|ref|XP_387043.1| hypothetical protein FG06867.1 [Gib...    59   1e-06
gi|33597255|ref|NP_884898.1| conserved hypothetical protein [Bor...    59   1e-06
gi|50758833|ref|XP_417438.1| PREDICTED: similar to PPAR-alpha in...    58   2e-06
gi|47156225|gb|AAT12000.1| armitage [Drosophila melanogaster]          58   2e-06
gi|50400310|sp|Q6J5K9|ARMI_DROME Probable RNA helicase armi (Arm...    58   2e-06
gi|50257775|gb|EAL20476.1| hypothetical protein CNBE3970 [Crypto...    58   2e-06
gi|6678029|ref|NP_033238.1| immunoglobulin mu binding protein 2;...    58   2e-06
gi|24656854|ref|NP_647816.1| CG11513-PA [Drosophila melanogaster...    58   2e-06
gi|19075911|ref|NP_588411.1| hypothetical protein [Schizosacchar...    57   3e-06
gi|34861034|ref|XP_230961.2| similar to Peroxisomal proliferator...    57   3e-06
gi|22972152|ref|ZP_00019048.1| hypothetical protein [Chloroflexu...    57   4e-06
gi|48835984|ref|ZP_00292982.1| COG1112: Superfamily I DNA and RN...    57   4e-06
gi|13904994|gb|AAH06779.1| BC006779 protein [Mus musculus]             57   4e-06
gi|46913216|emb|CAG20004.1| hypothetical protein [Photobacterium...    57   6e-06
gi|1177024|sp|P42694|HELZ_HUMAN Potential helicase with zinc-fin...    56   7e-06
gi|42661228|ref|XP_375485.1| helicase with zinc finger domain [H...    56   7e-06
gi|40789061|dbj|BAA06147.2| KIAA0054 [Homo sapiens]                    56   7e-06
gi|50747618|ref|XP_420931.1| PREDICTED: similar to DNA helicase ...    56   9e-06
gi|20804231|emb|CAD31257.1| PUTATIVE HELICASE PROTEIN ATP-BINDIN...    56   9e-06
gi|26006099|dbj|BAC41393.1| mKIAA0054 protein [Mus musculus]           55   1e-05
gi|50355943|ref|NP_938040.1| helicase with zinc finger domain [M...    55   1e-05
gi|50757855|ref|XP_415679.1| PREDICTED: similar to Potential hel...    55   1e-05
gi|34874109|ref|XP_237808.2| similar to mKIAA0054 protein [Rattu...    55   1e-05
gi|15644163|ref|NP_229212.1| helicase-related protein [Thermotog...    55   1e-05
gi|23015891|ref|ZP_00055655.1| COG1112: Superfamily I DNA and RN...    55   2e-05
gi|46111837|ref|XP_382976.1| hypothetical protein FG02800.1 [Gib...    55   2e-05
gi|46227554|gb|EAK88489.1| sen1p/ NAM7 like superfamily I RNA he...    55   2e-05
gi|49068896|ref|XP_398737.1| hypothetical protein UM01122.1 [Ust...    55   2e-05
gi|24640930|ref|NP_572597.1| CG2990-PA [Drosophila melanogaster]...    55   2e-05
gi|47196036|emb|CAF89197.1| unnamed protein product [Tetraodon n...    55   2e-05
gi|24640932|ref|NP_727386.1| CG2990-PB [Drosophila melanogaster]...    55   2e-05
gi|49235000|ref|ZP_00329078.1| COG1112: Superfamily I DNA and RN...    55   2e-05
gi|11359044|pir||T47242 DNA helicase homolog - fission yeast (Sc...    54   3e-05
gi|26328823|dbj|BAC28150.1| unnamed protein product [Mus musculus]     54   3e-05
gi|50252651|dbj|BAD28821.1| DNA helicase-like [Oryza sativa (jap...    54   3e-05
gi|30089668|gb|AAP20828.1| LD18775p [Drosophila melanogaster]          54   4e-05
gi|16550383|dbj|BAB70969.1| unnamed protein product [Homo sapiens]     54   5e-05
gi|21668026|gb|AAM74197.1| peroxisomal proliferator-activated re...    54   5e-05
gi|34335260|ref|NP_208384.2| PPAR-alpha interacting complex prot...    54   5e-05
gi|18676690|dbj|BAB84997.1| FLJ00244 protein [Homo sapiens]            54   5e-05
gi|30316116|sp|Q9BYK8|P285_HUMAN Peroxisomal proliferator-activa...    54   5e-05
gi|49105976|ref|XP_411383.1| hypothetical protein AN7246.2 [Aspe...    54   5e-05
gi|14133261|dbj|BAB21860.2| KIAA1769 protein [Homo sapiens]            54   5e-05
gi|33086800|gb|AAP92673.1| replicase polyprotein 1ab [Avian infe...    54   5e-05
gi|17505963|ref|NP_491376.1| putative cytoplasmic protein family...    53   6e-05
gi|47223949|emb|CAG06126.1| unnamed protein product [Tetraodon n...    53   6e-05
gi|47086099|ref|NP_998431.1| zgc:77407 [Danio rerio] >gnl|BL_ORD...    53   6e-05
gi|28829358|gb|AAO51900.1| similar to hypothetical protein; prot...    53   6e-05
gi|50543164|ref|XP_499748.1| hypothetical protein [Yarrowia lipo...    53   8e-05
gi|33240057|ref|NP_874999.1| Superfamily I DNA/RNA helicase [Pro...    52   1e-04
gi|41324069|gb|AAS00078.1| 1ab [Avian infectious bronchitis virus]     52   1e-04
gi|17538027|ref|NP_495964.1| NF-X1 type zinc finger containing p...    52   1e-04
gi|31216799|ref|XP_316302.1| ENSANGP00000020616 [Anopheles gambi...    52   1e-04
gi|10434562|dbj|BAB14299.1| unnamed protein product [Homo sapiens]     52   1e-04
gi|29150104|emb|CAD79665.1| conserved hypothetical protein [Neur...    52   1e-04
gi|50082762|gb|AAT70073.1| replicase polyprotein 1ab [Avian infe...    52   1e-04
gi|25121554|ref|NP_740630.1| coronavirus nsp10; metal-binding NT...    52   2e-04
gi|74826|pir||VFIHB2 genome polyprotein - avian infectious bronc...    52   2e-04
gi|38372862|sp|Q91QT2|R1AB_IBVBC Replicase polyprotein 1ab (pp1a...    52   2e-04
gi|14149033|emb|CAC39112.1| replicase polyprotein 1ab [Avian inf...    52   2e-04
gi|10242469|ref|NP_066134.1| ORF1ab polyprotein; frameshift prod...    52   2e-04
gi|458735|emb|CAA83018.1| potential chimeric protein [Avian infe...    52   2e-04
gi|15898288|ref|NP_342893.1| Hypothetical protein SSO1456 [Sulfo...    51   2e-04
gi|33569221|gb|AAQ21583.1| 1ab polyprotein [Avian infectious bro...    51   2e-04
gi|38346801|emb|CAD41369.2| OSJNBa0088A01.8 [Oryza sativa (japon...    51   3e-04
gi|37360018|dbj|BAC97987.1| mKIAA0625 protein [Mus musculus]           51   3e-04
gi|48108660|ref|XP_396207.1| similar to ENSANGP00000013515 [Apis...    50   4e-04
gi|50235230|gb|AAT70770.1| replicase polyprotein 1ab [Avian infe...    50   4e-04
gi|33440452|gb|AAQ19138.1| putative UvrD/REP helicase-like prote...    50   5e-04
gi|37522518|ref|NP_925895.1| hypothetical protein glr2949 [Gloeo...    50   5e-04
gi|30851520|gb|AAH52532.1| BC006779 protein [Mus musculus]             50   7e-04
gi|23482739|gb|EAA18631.1| hypothetical protein [Plasmodium yoel...    50   7e-04
gi|18976457|ref|NP_577814.1| putative DNA helicase [Pyrococcus f...    50   7e-04
gi|39793966|gb|AAH63664.1| DNA2L protein [Homo sapiens]                50   7e-04
gi|183250|gb|AAA58611.1| glial factor-1                                49   9e-04
gi|48096078|ref|XP_394597.1| similar to CG9425-PB [Apis mellifera]     49   9e-04
gi|30692868|ref|NP_198446.3| DNA-binding protein, putative [Arab...    49   0.002
gi|9758800|dbj|BAB09253.1| DNA helicase-like [Arabidopsis thaliana]    49   0.002
gi|32422215|ref|XP_331551.1| hypothetical protein [Neurospora cr...    48   0.003
gi|8843991|gb|AAF80211.1| Cag-omega [Helicobacter pylori]              48   0.003
gi|31196635|ref|XP_307265.1| ENSANGP00000002028 [Anopheles gambi...    48   0.003
gi|15800723|ref|NP_286737.1| Z1202 gene product [Escherichia col...    48   0.003
gi|15830638|ref|NP_309411.1| hypothetical protein ECs1384 [Esche...    48   0.003
gi|4680603|gb|AAD27693.1| urease-enhancing factor helB [Helicoba...    47   0.003
gi|46128539|ref|XP_388823.1| hypothetical protein FG08647.1 [Gib...    47   0.004
gi|23486176|gb|EAA20740.1| DNA replication helicase DNA2. [Plasm...    47   0.006
gi|24375506|ref|NP_719549.1| hypothetical protein SO4019 [Shewan...    46   0.007
gi|32410471|ref|XP_325716.1| hypothetical protein [Neurospora cr...    46   0.007
gi|46091494|dbj|BAD13936.1| cag pathogenicity island protein [He...    46   0.010
gi|47224394|emb|CAG08644.1| unnamed protein product [Tetraodon n...    45   0.013
gi|28199313|ref|NP_779627.1| DNA helicase [Xylella fastidiosa Te...    45   0.017
gi|38091913|ref|XP_126554.5| RIKEN cDNA 9630002H22 [Mus musculus]      45   0.022
gi|46110497|ref|XP_382306.1| hypothetical protein FG02130.1 [Gib...    45   0.022
gi|32412003|ref|XP_326482.1| hypothetical protein [Neurospora cr...    44   0.028
gi|19173301|ref|NP_597104.1| DNA REPLICATION HELICASE [Encephali...    44   0.028
gi|31202035|ref|XP_309965.1| ENSANGP00000015391 [Anopheles gambi...    44   0.028
gi|23619280|ref|NP_705242.1| hypothetical protein [Plasmodium fa...    44   0.048
gi|23954221|emb|CAD42018.1| hypothetical protein [Escherichia coli]    43   0.063
gi|15839000|ref|NP_299688.1| conserved hypothetical protein [Xyl...    43   0.063
gi|46562170|ref|YP_009125.1| conserved hypothetical protein [Des...    43   0.082
gi|23478836|gb|EAA15816.1| Sen1p [Plasmodium yoelii yoelii]            43   0.082
gi|23490633|gb|EAA22364.1| SEN1-related [Plasmodium yoelii yoelii]     43   0.082
gi|22996680|ref|ZP_00040927.1| COG1112: Superfamily I DNA and RN...    42   0.11
gi|16767733|ref|NP_463348.1| putative DNA helicases [Salmonella ...    42   0.14
gi|21232563|ref|NP_638480.1| DNA helicase related protein [Xanth...    42   0.18
gi|25121570|ref|NP_740617.1| coronavirus nsp10 (MB, NTPase/HEL) ...    42   0.18
gi|26007546|ref|NP_068668.2| ORF1ab polyprotein [Murine hepatiti...    42   0.18
gi|45553113|ref|NP_996084.1| CG9425-PB [Drosophila melanogaster]...    42   0.18
gi|2641128|gb|AAB86818.1| RNA-directed RNA polymerase [murine he...    42   0.18
gi|18676696|dbj|BAB85000.1| FLJ00247 protein [Homo sapiens]            41   0.24
gi|37999877|sp|P16342|R1AB_CVMA5 Replicase polyprotein 1ab (pp1a...    41   0.24
gi|93916|pir||S15760 genome polyprotein - murine hepatitis virus...    41   0.24
gi|4377413|emb|CAA36202.1| unnamed protein product [Murine hepat...    41   0.24
gi|7769353|gb|AAF69342.1| RNA-directed RNA polymerase [murine he...    41   0.24
gi|12643206|gb|AAK00458.1| unknown [Shigella flexneri 2a]              40   0.41
gi|32566895|ref|NP_507684.2| putative protein, with 2 coiled coi...    40   0.41
gi|24114229|ref|NP_708739.1| putative superfamily I DNA helicase...    40   0.41
gi|50470808|emb|CAB60444.3| Hypothetical protein Y80D3A.2 [Caeno...    40   0.41
gi|49103428|ref|XP_411151.1| hypothetical protein AN7014.2 [Aspe...    40   0.41
gi|30027619|gb|AAP13440.1| nonstructural polyprotein [SARS coron...    40   0.53
gi|38346802|emb|CAD41370.2| OSJNBa0088A01.9 [Oryza sativa (japon...    40   0.53
gi|29837505|ref|NP_828870.1| nsp13-pp1ab (ZD, NTPase/HEL) [SARS ...    40   0.53
gi|40457449|gb|AAR86774.1| orf1ab [SARS coronavirus ShanghaiQXC2]      40   0.53
gi|40548922|gb|AAR87543.1| putative polyprotein [SARS coronaviru...    40   0.53
gi|40548970|gb|AAR87587.1| putative polyprotein [SARS coronaviru...    40   0.53
gi|30124074|ref|NP_828849.2| orf1ab polyprotein (pp1ab) [SARS co...    40   0.53
gi|38231938|gb|AAR14810.1| putative orf1ab polyprotein [SARS cor...    40   0.53
gi|40557708|gb|AAP82978.2| orf1ab [SARS coronavirus ShanghaiQXC1]      40   0.53
gi|40548910|gb|AAR87532.1| putative polyprotein [SARS coronaviru...    40   0.53
gi|30027621|gb|AAP13442.1| nonstructural polyprotein pp1ab [SARS...    40   0.53
gi|38505492|gb|AAR23251.1| orf1ab polyprotein [SARS coronavirus ...    40   0.53
gi|50365701|gb|AAT76146.1| replicase 1ab [SARS coronavirus TJF]        40   0.53
gi|40795745|gb|AAR91584.1| nonstructural polyprotein [SARS coron...    40   0.53
gi|30023953|gb|AAP13566.1| putative orf1ab polyprotein [SARS cor...    40   0.53
gi|40548982|gb|AAR87598.1| putative polyprotein [SARS coronaviru...    40   0.53
gi|38231928|gb|AAR14802.1| putative orf1ab polyprotein [SARS cor...    40   0.53
gi|30795144|gb|AAP41036.1| replicase 1AB [SARS coronavirus Tor2]       40   0.53
gi|41323720|gb|AAS00002.1| nonstructural polyprotein [SARS coron...    40   0.53
gi|30275667|gb|AAP30028.1| orf1ab [SARS coronavirus BJ01]              40   0.53
gi|40548886|gb|AAR87510.1| putative polyprotein [SARS coronaviru...    40   0.53
gi|31581504|gb|AAP33696.1| polyprotein 1ab [SARS coronavirus Fra...    40   0.53
gi|33114215|gb|AAP94757.1| putative orf1ab polyprotein [SARS cor...    40   0.53
gi|38505483|gb|AAR23243.1| orf1ab polyprotein [SARS coronavirus ...    40   0.53
gi|31416293|gb|AAP51225.1| orf1ab [SARS coronavirus GD01]              40   0.53
gi|7769342|gb|AAF69332.1| RNA-directed RNA polymerase [murine he...    40   0.70
gi|38372857|sp|Q66198|R1AB_CVBM Replicase polyprotein 1ab (pp1ab...    40   0.70
gi|49522892|gb|AAH75105.1| Unknown (protein for MGC:79646) [Xeno...    40   0.70
gi|17529672|gb|AAL40397.1| RNA polymerase 1b [bovine coronavirus]      40   0.70
gi|37999876|sp|Q9PYA3|R1AB_CVM2 Replicase polyprotein 1ab (pp1ab...    40   0.70
gi|48832193|ref|ZP_00289234.1| COG1112: Superfamily I DNA and RN...    40   0.70
gi|6625761|gb|AAF19384.1| RNA-directed RNA polymerase [murine he...    40   0.70
gi|2558947|gb|AAB81615.1| ParC [Bacillus subtilis]                     40   0.70
gi|16078871|ref|NP_389692.1| subunit of DNA topoisomerase IV [Ba...    40   0.70
gi|38372858|sp|Q8V6W7|R1AB_CVBQ Replicase polyprotein 1ab (pp1ab...    40   0.70
gi|16132129|ref|NP_418728.1| putative frameshift suppressor; KpL...    39   0.91
gi|42741329|gb|AAS44814.1| replicase 1B [SARS coronavirus TW-HP1...    39   0.91
gi|29247445|gb|EAA39007.1| GLP_542_32520_28105 [Giardia lamblia ...    39   0.91
gi|39587400|emb|CAE75054.1| Hypothetical protein CBG22968 [Caeno...    39   1.2
gi|48765582|ref|ZP_00270132.1| COG1112: Superfamily I DNA and RN...    39   1.2
gi|23619449|ref|NP_705411.1| hypothetical protein, conserved [Pl...    39   1.2
gi|26008091|ref|NP_742139.1| coronavirus nsp10 (MB, NTPase/HEL);...    39   1.6
gi|18033972|gb|AAL57305.1| replicase [bovine coronavirus]              39   1.6
gi|38372859|sp|Q8V439|R1AB_CVBLU Replicase polyprotein 1ab (pp1a...    39   1.6
gi|15077820|gb|AAK83365.1| replicase [bovine coronavirus]              39   1.6
gi|26008080|ref|NP_150073.2| orf1ab polyprotein [Bovine coronavi...    39   1.6
gi|21674440|ref|NP_662505.1| DNA helicase, putative [Chlorobium ...    39   1.6
gi|48854113|ref|ZP_00308277.1| COG1112: Superfamily I DNA and RN...    39   1.6
gi|41352890|gb|AAS01059.1| orf1ab polyprotein [SARS coronavirus ...    39   1.6
gi|38018023|ref|NP_937947.1| replicase polyprotein [Human corona...    39   1.6
gi|32423223|ref|XP_332049.1| hypothetical protein [Neurospora cr...    38   2.0
gi|50549477|ref|XP_502209.1| hypothetical protein [Yarrowia lipo...    38   2.7
gi|23485591|gb|EAA20484.1| hypothetical protein [Plasmodium yoel...    38   2.7
gi|24372169|ref|NP_716211.1| PhoH family protein [Shewanella one...    38   2.7
gi|24664327|ref|NP_648725.1| CG9425-PA [Drosophila melanogaster]...    37   3.5
gi|23612159|ref|NP_703739.1| hypothetical protein [Plasmodium fa...    37   3.5
gi|42560748|ref|NP_975199.1| hypothetical protein MSC_0196 [Myco...    37   3.5
gi|34762953|ref|ZP_00143932.1| Superfamily I DNA helicase [Fusob...    37   3.5
gi|38324306|gb|AAP49011.4| orf1ab polyprotein [SARS coronavirus ...    37   3.5
gi|47221715|emb|CAG10187.1| unnamed protein product [Tetraodon n...    37   4.5
gi|5748807|gb|AAA85160.2| syringomycin biosynthesis enzyme 1 [Ps...    37   5.9
gi|23468399|ref|ZP_00123734.1| COG1020: Non-ribosomal peptide sy...    37   5.9
gi|23488577|gb|EAA21354.1| hypothetical protein [Plasmodium yoel...    37   5.9
gi|46912047|emb|CAG18842.1| conserved hypothetical protein [Phot...    37   5.9
gi|28377747|ref|NP_784639.1| unknown [Lactobacillus plantarum WC...    37   5.9
gi|15896287|ref|NP_349636.1| Superfamily I DNA helicase [Clostri...    36   7.7
gi|23618962|ref|NP_704924.1| hypothetical protein [Plasmodium fa...    36   7.7
gi|15669714|ref|NP_248527.1| exodeoxyribonuclease V (recD) [Meth...    36   7.7
gi|38110748|gb|EAA56424.1| hypothetical protein MG06395.4 [Magna...    36   7.7
gi|50406558|ref|XP_456644.1| unnamed protein product [Debaryomyc...    31   7.8


>gi|17531513|ref|NP_496141.1| regulator of nonsense transcripts family
            member (2K219) [Caenorhabditis elegans]
 gi|14530347|emb|CAC42246.1| Hypothetical protein C05C10.2b
            [Caenorhabditis elegans]
          Length = 1553

 Score = 3073 bits (7966), Expect = 0.0
 Identities = 1520/1553 (97%), Positives = 1520/1553 (97%)
 Frame = +1

Query: 1    MRKIGEFLKYVQFFSSAKFSRNNLLKPENSFPPTHFDTWERLSDYQKPSSSTTDDAYGKP 180
            MRKIGEFLKYVQFFSSAKFSRNNLLKPENSFPPTHFDTWERLSDYQKPSSSTTDDAYGKP
Sbjct: 1    MRKIGEFLKYVQFFSSAKFSRNNLLKPENSFPPTHFDTWERLSDYQKPSSSTTDDAYGKP 60

Query: 181  VAKISPTASIDERETGIIGSTLRQXXXXXXXXXXXNMNPYDRLDKEVISKKNAHTNSYRN 360
            VAKISPTASIDERETGIIGSTLRQ           NMNPYDRLDKEVISKKNAHTNSYRN
Sbjct: 61   VAKISPTASIDERETGIIGSTLRQDSTDSDSTGSSNMNPYDRLDKEVISKKNAHTNSYRN 120

Query: 361  DVDELEGSLRTLGLQKVNAPTIXXXXXXXXXXXXXXXXXXXXXXKIVKAEIKAPQQPMSL 540
            DVDELEGSLRTLGLQKVNAPTI                      KIVKAEIKAPQQPMSL
Sbjct: 121  DVDELEGSLRTLGLQKVNAPTISSFSAWKSQSSALPAPSSSETSKIVKAEIKAPQQPMSL 180

Query: 541  VYPESEYSILVFVFQNPNYFDVMREMEKSMNIFTKLFRGSQIRNKNDLPSGRHLVNYRQN 720
            VYPESEYSILVFVFQNPNYFDVMREMEKSMNIFTKLFRGSQIRNKNDLPSGRHLVNYRQN
Sbjct: 181  VYPESEYSILVFVFQNPNYFDVMREMEKSMNIFTKLFRGSQIRNKNDLPSGRHLVNYRQN 240

Query: 721  HAFDFAAMSHIWKENKMENLPKLPHRANLVMTLPSSRVRNSKICAFYRVLEKKEDKYILV 900
            HAFDFAAMSHIWKENKMENLPKLPHRANLVMTLPSSRVRNSKICAFYRVLEKKEDKYILV
Sbjct: 241  HAFDFAAMSHIWKENKMENLPKLPHRANLVMTLPSSRVRNSKICAFYRVLEKKEDKYILV 300

Query: 901  ACHVNIHGFHRGDLRFVEVNNRTVLKGFERSSVIGHLFLGDILTVTELTRCNETVSNVAS 1080
            ACHVNIHGFHRGDLRFVEVNNRTVLKGFERSSVIGHLFLGDILTVTELTRCNETVSNVAS
Sbjct: 301  ACHVNIHGFHRGDLRFVEVNNRTVLKGFERSSVIGHLFLGDILTVTELTRCNETVSNVAS 360

Query: 1081 SVEDASPDAPCQWMASKVVLFPRHEPVNVQFKFTCNGMASVVSTNEPMSVILNNLTEAKT 1260
            SVEDASPDAPCQWMASKVVLFPRHEPVNVQFKFTCNGMASVVSTNEPMSVILNNLTEAKT
Sbjct: 361  SVEDASPDAPCQWMASKVVLFPRHEPVNVQFKFTCNGMASVVSTNEPMSVILNNLTEAKT 420

Query: 1261 NVEYTGIAFKSASYTVHTEDYTKKWYERIQEEISNIMIYPKALSTIYQYEEYTPNFVVEK 1440
            NVEYTGIAFKSASYTVHTEDYTKKWYERIQEEISNIMIYPKALSTIYQYEEYTPNFVVEK
Sbjct: 421  NVEYTGIAFKSASYTVHTEDYTKKWYERIQEEISNIMIYPKALSTIYQYEEYTPNFVVEK 480

Query: 1441 QEQEEHPYQQDLEDLDLYRQHEMQTNVFTKFFDIGKSEKRKFGPGKSISNCRHSDAIDFA 1620
            QEQEEHPYQQDLEDLDLYRQHEMQTNVFTKFFDIGKSEKRKFGPGKSISNCRHSDAIDFA
Sbjct: 481  QEQEEHPYQQDLEDLDLYRQHEMQTNVFTKFFDIGKSEKRKFGPGKSISNCRHSDAIDFA 540

Query: 1621 AMSYIWKNIRQQHLPKLPKLPNMVLPLPTSMPLDSEICAFYRVLVENKSKYILIACHMNV 1800
            AMSYIWKNIRQQHLPKLPKLPNMVLPLPTSMPLDSEICAFYRVLVENKSKYILIACHMNV
Sbjct: 541  AMSYIWKNIRQQHLPKLPKLPNMVLPLPTSMPLDSEICAFYRVLVENKSKYILIACHMNV 600

Query: 1801 HGYHRGDLRFLEINESTKLYGFEGRSVIGQLFLGDIVAVTELARCNGHGSDAFKIPFDVS 1980
            HGYHRGDLRFLEINESTKLYGFEGRSVIGQLFLGDIVAVTELARCNGHGSDAFKIPFDVS
Sbjct: 601  HGYHRGDLRFLEINESTKLYGFEGRSVIGQLFLGDIVAVTELARCNGHGSDAFKIPFDVS 660

Query: 1981 MSSQNTCTWMASKITLPSRPPPASVLFSFMKNRMAVVKGCDEPMNVEVKSIQNVEPDLIY 2160
            MSSQNTCTWMASKITLPSRPPPASVLFSFMKNRMAVVKGCDEPMNVEVKSIQNVEPDLIY
Sbjct: 661  MSSQNTCTWMASKITLPSRPPPASVLFSFMKNRMAVVKGCDEPMNVEVKSIQNVEPDLIY 720

Query: 2161 KGTAFKPEKPELNFTEGFIKKKRHQIGSITLRIASYPNSFGTIYNFQESDIDNEHYKIGI 2340
            KGTAFKPEKPELNFTEGFIKKKRHQIGSITLRIASYPNSFGTIYNFQESDIDNEHYKIGI
Sbjct: 721  KGTAFKPEKPELNFTEGFIKKKRHQIGSITLRIASYPNSFGTIYNFQESDIDNEHYKIGI 780

Query: 2341 NAFSEEKFTEISLDEREKIVETCSLMGFSAANTIFNGRFDCRAFKMEEIKKNGMTVMFCI 2520
            NAFSEEKFTEISLDEREKIVETCSLMGFSAANTIFNGRFDCRAFKMEEIKKNGMTVMFCI
Sbjct: 781  NAFSEEKFTEISLDEREKIVETCSLMGFSAANTIFNGRFDCRAFKMEEIKKNGMTVMFCI 840

Query: 2521 ENPTSQPTLGLWCAGNRIVIGGPNGDVNGAIETVIDDPDIGYLRIAARLSRDIPKKFSFK 2700
            ENPTSQPTLGLWCAGNRIVIGGPNGDVNGAIETVIDDPDIGYLRIAARLSRDIPKKFSFK
Sbjct: 841  ENPTSQPTLGLWCAGNRIVIGGPNGDVNGAIETVIDDPDIGYLRIAARLSRDIPKKFSFK 900

Query: 2701 GDGEFFVSQREVFENEILDDGYFKTLDPGCNGRRIIETLYGGKPLERVVVDKRDSSIERM 2880
            GDGEFFVSQREVFENEILDDGYFKTLDPGCNGRRIIETLYGGKPLERVVVDKRDSSIERM
Sbjct: 901  GDGEFFVSQREVFENEILDDGYFKTLDPGCNGRRIIETLYGGKPLERVVVDKRDSSIERM 960

Query: 2881 MSQLFGVGSGISEHKTSGKKSEDTPTQFYFPSTPEPLALNKYQCEYVQMLLDGNPLIIGS 3060
            MSQLFGVGSGISEHKTSGKKSEDTPTQFYFPSTPEPLALNKYQCEYVQMLLDGNPLIIGS
Sbjct: 961  MSQLFGVGSGISEHKTSGKKSEDTPTQFYFPSTPEPLALNKYQCEYVQMLLDGNPLIIGS 1020

Query: 3061 SPFGCGKSMTIITAALELYKLKKNRKQLLITQSNYASVNLIDIAQRVCLSGDDDLKDLKF 3240
            SPFGCGKSMTIITAALELYKLKKNRKQLLITQSNYASVNLIDIAQRVCLSGDDDLKDLKF
Sbjct: 1021 SPFGCGKSMTIITAALELYKLKKNRKQLLITQSNYASVNLIDIAQRVCLSGDDDLKDLKF 1080

Query: 3241 VRFVSEKNWNELPSNCRTDSDMPYLMNKLFKDWAMGRIDLTNLTCLKTHHYVQMVSHIIK 3420
            VRFVSEKNWNELPSNCRTDSDMPYLMNKLFKDWAMGRIDLTNLTCLKTHHYVQMVSHIIK
Sbjct: 1081 VRFVSEKNWNELPSNCRTDSDMPYLMNKLFKDWAMGRIDLTNLTCLKTHHYVQMVSHIIK 1140

Query: 3421 NDLVNPMLFGDHIAQIYDKLSADFSRAPHAQTLVEAFFMIYKPDLVMVTADSAKGLLNIL 3600
            NDLVNPMLFGDHIAQIYDKLSADFSRAPHAQTLVEAFFMIYKPDLVMVTADSAKGLLNIL
Sbjct: 1141 NDLVNPMLFGDHIAQIYDKLSADFSRAPHAQTLVEAFFMIYKPDLVMVTADSAKGLLNIL 1200

Query: 3601 RDVCAVQIDEASQLAECTLLGLLKSFNNASFGLIGDIHQLPPYCEEGLEGKLKDFGIGNT 3780
            RDVCAVQIDEASQLAECTLLGLLKSFNNASFGLIGDIHQLPPYCEEGLEGKLKDFGIGNT
Sbjct: 1201 RDVCAVQIDEASQLAECTLLGLLKSFNNASFGLIGDIHQLPPYCEEGLEGKLKDFGIGNT 1260

Query: 3781 MERAIKEKMFPVCTLRNVYRCHPKTTELLSELFYDGALVSGVSELARSDFMTKRDDFWPN 3960
            MERAIKEKMFPVCTLRNVYRCHPKTTELLSELFYDGALVSGVSELARSDFMTKRDDFWPN
Sbjct: 1261 MERAIKEKMFPVCTLRNVYRCHPKTTELLSELFYDGALVSGVSELARSDFMTKRDDFWPN 1320

Query: 3961 PKFPMMFVNNTGASTKMGTSTSNSSEKSIVGEIVQNLINDPRNPVNPSDIGVISFYSAQT 4140
            PKFPMMFVNNTGASTKMGTSTSNSSEKSIVGEIVQNLINDPRNPVNPSDIGVISFYSAQT
Sbjct: 1321 PKFPMMFVNNTGASTKMGTSTSNSSEKSIVGEIVQNLINDPRNPVNPSDIGVISFYSAQT 1380

Query: 4141 SILTEHLRGSGVKCGTVDAFQGSEKEIIIMCSTNERISDFMQLSNRLNVAMSRAKQVTII 4320
            SILTEHLRGSGVKCGTVDAFQGSEKEIIIMCSTNERISDFMQLSNRLNVAMSRAKQVTII
Sbjct: 1381 SILTEHLRGSGVKCGTVDAFQGSEKEIIIMCSTNERISDFMQLSNRLNVAMSRAKQVTII 1440

Query: 4321 IGHLDGLRRANYWSTIVNKIEQNGNLVNANDWYQNQRRNKVSLSSYPLISTSRQSKQQRA 4500
            IGHLDGLRRANYWSTIVNKIEQNGNLVNANDWYQNQRRNKVSLSSYPLISTSRQSKQQRA
Sbjct: 1441 IGHLDGLRRANYWSTIVNKIEQNGNLVNANDWYQNQRRNKVSLSSYPLISTSRQSKQQRA 1500

Query: 4501 NEYNSQHKHVKRQSNNDYGSQRSVTNSLNPEFVGFQKWDDETYGDWPTIQKST 4659
            NEYNSQHKHVKRQSNNDYGSQRSVTNSLNPEFVGFQKWDDETYGDWPTIQKST
Sbjct: 1501 NEYNSQHKHVKRQSNNDYGSQRSVTNSLNPEFVGFQKWDDETYGDWPTIQKST 1553


>gi|17531515|ref|NP_496142.1| regulator of nonsense transcripts family
            member (2K219) [Caenorhabditis elegans]
 gi|2498041|sp|Q09449|YQ12_CAEEL HYPOTHETICAL 175.7 KD PROTEIN
            C05C10.2 IN CHROMOSOME II
 gi|7495408|pir||T18941 hypothetical protein C05C10.2 - Caenorhabditis
            elegans
 gi|3874068|emb|CAA88201.1| Hypothetical protein C05C10.2a
            [Caenorhabditis elegans]
          Length = 1551

 Score = 3063 bits (7942), Expect = 0.0
 Identities = 1518/1553 (97%), Positives = 1518/1553 (97%)
 Frame = +1

Query: 1    MRKIGEFLKYVQFFSSAKFSRNNLLKPENSFPPTHFDTWERLSDYQKPSSSTTDDAYGKP 180
            MRKIGEFLKYVQFFSSAKFSRNNLLKPENSFPPTHFDTWERLSDYQKPSSSTTDDAYGKP
Sbjct: 1    MRKIGEFLKYVQFFSSAKFSRNNLLKPENSFPPTHFDTWERLSDYQKPSSSTTDDAYGKP 60

Query: 181  VAKISPTASIDERETGIIGSTLRQXXXXXXXXXXXNMNPYDRLDKEVISKKNAHTNSYRN 360
            VAKISPTASIDERETGIIGSTLRQ           NMNPYDRLDKEVISKKNAHTNSYRN
Sbjct: 61   VAKISPTASIDERETGIIGSTLRQDSTDSDSTGSSNMNPYDRLDKEVISKKNAHTNSYRN 120

Query: 361  DVDELEGSLRTLGLQKVNAPTIXXXXXXXXXXXXXXXXXXXXXXKIVKAEIKAPQQPMSL 540
            DVDELEGSLRTLGLQKVNAPTI                      KIVKAEIKAPQQPMSL
Sbjct: 121  DVDELEGSLRTLGLQKVNAPTISSFSAWKSQSSALPAPSSSETSKIVKAEIKAPQQPMSL 180

Query: 541  VYPESEYSILVFVFQNPNYFDVMREMEKSMNIFTKLFRGSQIRNKNDLPSGRHLVNYRQN 720
            VYPESEYSILVFVFQNPNYFDVMREMEKSMNIFTKLFRGSQIRNKNDLPSGRHLVNYRQN
Sbjct: 181  VYPESEYSILVFVFQNPNYFDVMREMEKSMNIFTKLFRGSQIRNKNDLPSGRHLVNYRQN 240

Query: 721  HAFDFAAMSHIWKENKMENLPKLPHRANLVMTLPSSRVRNSKICAFYRVLEKKEDKYILV 900
            HAFDFAAMSHIWKENKMENLPKLPHRANLVMTLPSSRVRNSKICAFYRVLEKKEDKYILV
Sbjct: 241  HAFDFAAMSHIWKENKMENLPKLPHRANLVMTLPSSRVRNSKICAFYRVLEKKEDKYILV 300

Query: 901  ACHVNIHGFHRGDLRFVEVNNRTVLKGFERSSVIGHLFLGDILTVTELTRCNETVSNVAS 1080
            ACHVNIHGFHRGDLRFVEVNNRTVLKGFERSSVIGHLFLGDILTVTELTRCNETVSNVAS
Sbjct: 301  ACHVNIHGFHRGDLRFVEVNNRTVLKGFERSSVIGHLFLGDILTVTELTRCNETVSNVAS 360

Query: 1081 SVEDASPDAPCQWMASKVVLFPRHEPVNVQFKFTCNGMASVVSTNEPMSVILNNLTEAKT 1260
            SVEDASPDAPCQWMASKVVLFPRHEPVNVQFKFTCNGMASVVSTNEPMSVILNNLTEAKT
Sbjct: 361  SVEDASPDAPCQWMASKVVLFPRHEPVNVQFKFTCNGMASVVSTNEPMSVILNNLTEAKT 420

Query: 1261 NVEYTGIAFKSASYTVHTEDYTKKWYERIQEEISNIMIYPKALSTIYQYEEYTPNFVVEK 1440
            NVEYTGIAFKSASYTVHTEDYTKKWYERIQEEISNIMIYPKALSTIYQYEEYTPNFVVEK
Sbjct: 421  NVEYTGIAFKSASYTVHTEDYTKKWYERIQEEISNIMIYPKALSTIYQYEEYTPNFVVEK 480

Query: 1441 QEQEEHPYQQDLEDLDLYRQHEMQTNVFTKFFDIGKSEKRKFGPGKSISNCRHSDAIDFA 1620
            QEQEEHPYQQDLEDLDLYRQHEMQTNVFTKFFDIGKSEKRKFGPGKSISNCRHSDAIDFA
Sbjct: 481  QEQEEHPYQQDLEDLDLYRQHEMQTNVFTKFFDIGKSEKRKFGPGKSISNCRHSDAIDFA 540

Query: 1621 AMSYIWKNIRQQHLPKLPKLPNMVLPLPTSMPLDSEICAFYRVLVENKSKYILIACHMNV 1800
            AMSYIWKNIRQQHLPKLPKLPNMVLPLPTSMPLDSEICAFYRVLVENKSKYILIACHMNV
Sbjct: 541  AMSYIWKNIRQQHLPKLPKLPNMVLPLPTSMPLDSEICAFYRVLVENKSKYILIACHMNV 600

Query: 1801 HGYHRGDLRFLEINESTKLYGFEGRSVIGQLFLGDIVAVTELARCNGHGSDAFKIPFDVS 1980
            HGYHRGDLRFLEINESTKLYGFEGRSVIGQLFLGDIVAVTELARCNGHGSDAFKIPFDVS
Sbjct: 601  HGYHRGDLRFLEINESTKLYGFEGRSVIGQLFLGDIVAVTELARCNGHGSDAFKIPFDVS 660

Query: 1981 MSSQNTCTWMASKITLPSRPPPASVLFSFMKNRMAVVKGCDEPMNVEVKSIQNVEPDLIY 2160
            MSSQNTCTWMASKITLPSRPPPASVLFSFMKNRMAVVKGCDEPMNVEVKSIQNVEPDLIY
Sbjct: 661  MSSQNTCTWMASKITLPSRPPPASVLFSFMKNRMAVVKGCDEPMNVEVKSIQNVEPDLIY 720

Query: 2161 KGTAFKPEKPELNFTEGFIKKKRHQIGSITLRIASYPNSFGTIYNFQESDIDNEHYKIGI 2340
            KGTAFKPEKPELNFTEGFIKKKRHQIGSITLRIASYPNSFGTIYNFQESDIDNEHYKIGI
Sbjct: 721  KGTAFKPEKPELNFTEGFIKKKRHQIGSITLRIASYPNSFGTIYNFQESDIDNEHYKIGI 780

Query: 2341 NAFSEEKFTEISLDEREKIVETCSLMGFSAANTIFNGRFDCRAFKMEEIKKNGMTVMFCI 2520
            NAFSEEKFTEISLDEREKIVETCSLMGFSAANTIFNGRFDCRAFKMEEIKKNGMTVMFCI
Sbjct: 781  NAFSEEKFTEISLDEREKIVETCSLMGFSAANTIFNGRFDCRAFKMEEIKKNGMTVMFCI 840

Query: 2521 ENPTSQPTLGLWCAGNRIVIGGPNGDVNGAIETVIDDPDIGYLRIAARLSRDIPKKFSFK 2700
            ENPTSQPTLGLWCAGNRIVIGGPNGDVNGAIETVIDDPDIGYLRIAARLSRDIPKKFSFK
Sbjct: 841  ENPTSQPTLGLWCAGNRIVIGGPNGDVNGAIETVIDDPDIGYLRIAARLSRDIPKKFSFK 900

Query: 2701 GDGEFFVSQREVFENEILDDGYFKTLDPGCNGRRIIETLYGGKPLERVVVDKRDSSIERM 2880
            GDGEFFVSQREVFENEILDDGYFKTLDPGCNGRRIIETLYGGKPLERVVVDKRDSSIERM
Sbjct: 901  GDGEFFVSQREVFENEILDDGYFKTLDPGCNGRRIIETLYGGKPLERVVVDKRDSSIERM 960

Query: 2881 MSQLFGVGSGISEHKTSGKKSEDTPTQFYFPSTPEPLALNKYQCEYVQMLLDGNPLIIGS 3060
            MSQLFGVGSGISEHKTSGKKSEDTPTQFYFPSTPEPLALNKYQCEYVQMLLDGNPLIIGS
Sbjct: 961  MSQLFGVGSGISEHKTSGKKSEDTPTQFYFPSTPEPLALNKYQCEYVQMLLDGNPLIIGS 1020

Query: 3061 SPFGCGKSMTIITAALELYKLKKNRKQLLITQSNYASVNLIDIAQRVCLSGDDDLKDLKF 3240
            SPFGCGKSMTIITAALELYKLKKNRKQLLITQSNYASVNLIDIAQRVCLSGDDDLKDLKF
Sbjct: 1021 SPFGCGKSMTIITAALELYKLKKNRKQLLITQSNYASVNLIDIAQRVCLSGDDDLKDLKF 1080

Query: 3241 VRFVSEKNWNELPSNCRTDSDMPYLMNKLFKDWAMGRIDLTNLTCLKTHHYVQMVSHIIK 3420
            VRFVSEKNWNELPSNCRTDSDMPYLMNKLFKDWAMGRIDLTNLTCLKTHHYVQMVSHIIK
Sbjct: 1081 VRFVSEKNWNELPSNCRTDSDMPYLMNKLFKDWAMGRIDLTNLTCLKTHHYVQMVSHIIK 1140

Query: 3421 NDLVNPMLFGDHIAQIYDKLSADFSRAPHAQTLVEAFFMIYKPDLVMVTADSAKGLLNIL 3600
            NDLVNPMLFGDHIAQIYDKLSADFSRAPHAQTLVEAFFMIYKPDLVMVTADSAKGLLNIL
Sbjct: 1141 NDLVNPMLFGDHIAQIYDKLSADFSRAPHAQTLVEAFFMIYKPDLVMVTADSAKGLLNIL 1200

Query: 3601 RDVCAVQIDEASQLAECTLLGLLKSFNNASFGLIGDIHQLPPYCEEGLEGKLKDFGIGNT 3780
            RDVCAVQIDEASQLAECTLLGLLKSFNNASFGLIGDIHQLPPYCEEGLEGKLKDFGIGNT
Sbjct: 1201 RDVCAVQIDEASQLAECTLLGLLKSFNNASFGLIGDIHQLPPYCEEGLEGKLKDFGIGNT 1260

Query: 3781 MERAIKEKMFPVCTLRNVYRCHPKTTELLSELFYDGALVSGVSELARSDFMTKRDDFWPN 3960
            MERAIKEKMFPVCTLRNVYRCHPKTTELLSELFYDGALVSGVSELARSDFMTKRDDFWPN
Sbjct: 1261 MERAIKEKMFPVCTLRNVYRCHPKTTELLSELFYDGALVSGVSELARSDFMTKRDDFWPN 1320

Query: 3961 PKFPMMFVNNTGASTKMGTSTSNSSEKSIVGEIVQNLINDPRNPVNPSDIGVISFYSAQT 4140
            PKFPMMFVNNTGASTKMGTSTSNSSEKSIVGEIVQNLINDPRNPVNPSDIGVISFYSAQT
Sbjct: 1321 PKFPMMFVNNTGASTKMGTSTSNSSEKSIVGEIVQNLINDPRNPVNPSDIGVISFYSAQT 1380

Query: 4141 SILTEHLRGSGVKCGTVDAFQGSEKEIIIMCSTNERISDFMQLSNRLNVAMSRAKQVTII 4320
            SILTEHLRGSGVKCGTVDAFQGSEKEIIIMCSTNERISDFMQLSNRLNVAMSRAKQVTII
Sbjct: 1381 SILTEHLRGSGVKCGTVDAFQGSEKEIIIMCSTNERISDFMQLSNRLNVAMSRAKQVTII 1440

Query: 4321 IGHLDGLRRANYWSTIVNKIEQNGNLVNANDWYQNQRRNKVSLSSYPLISTSRQSKQQRA 4500
            IGHLDGLRRANYWSTIVNKIEQNGNLVNANDWYQNQRRNKVSLSSYPLISTSRQSKQQRA
Sbjct: 1441 IGHLDGLRRANYWSTIVNKIEQNGNLVNANDWYQNQRRNKVSLSSYPLISTSRQSKQQRA 1500

Query: 4501 NEYNSQHKHVKRQSNNDYGSQRSVTNSLNPEFVGFQKWDDETYGDWPTIQKST 4659
            NEYNSQHKHVKRQSNNDYGSQRSVTNSLNPEFVG  KWDDETYGDWPTIQKST
Sbjct: 1501 NEYNSQHKHVKRQSNNDYGSQRSVTNSLNPEFVG--KWDDETYGDWPTIQKST 1551


>gi|39589213|emb|CAE57946.1| Hypothetical protein CBG01003
            [Caenorhabditis briggsae]
          Length = 1239

 Score = 1215 bits (3143), Expect = 0.0
 Identities = 643/1285 (50%), Positives = 852/1285 (66%), Gaps = 21/1285 (1%)
 Frame = +1

Query: 607  MREMEKSMNIFTKLFRGSQIRNKNDLPSGRHLVNYRQNHAFDFAAMSHIWKENKMENLPK 786
            +  +E   N+F++ +     R     P  R + N++ +   +FAA S+ W  N   +LP+
Sbjct: 1    LHALETEKNVFSQFYAKKWPRQLRK-PKNREISNFKHSEGAEFAAKSYFWDNNWDFDLPE 59

Query: 787  LPHRANLVMTLPSSRVRNSKICAFYRVLEKKEDKYILVACHVNIHGFHRGDLRFVEVNNR 966
            LP    ++M LP+S        AFYRVL +KEDKYILVACH N+HGFHRGDLRF+E+N+R
Sbjct: 60   LPKPEQMIMPLPTSTPDVYDDFAFYRVLMEKEDKYILVACHANVHGFHRGDLRFLEINSR 119

Query: 967  TVLKGFERSSVIGHLFLGDILTVTELTRCNETVSNVAS-SVEDASPDAPCQWMASKVVLF 1143
            + L   E  SVIG LFLGDI+ VTEL R +E +S V    V   +PD  C W+ SK++L+
Sbjct: 120  SRLNRLEGQSVIGSLFLGDIVAVTELARNSEAISPVRDVDVSLVTPDTSCYWIVSKMILY 179

Query: 1144 PRHEPVNVQFKFTC-NGMASVVSTNEPMSVILNNLTEAKTNVEYTGIAFKSASYTVH-TE 1317
            PR+        F+  N MA++   NEPM++ ++N      +  YTG+ F+  +   H ++
Sbjct: 180  PRNVDKKSPVLFSIVNRMAAIKGENEPMNLNVDNWDMMHADSIYTGLTFRPETLEYHFSK 239

Query: 1318 DYTKKWYERIQEEISNIMIYPKALSTIYQYEE--YTPNFVVEKQEQEEHPYQQDLEDLDL 1491
            DY KK    +      I  YP    TI++++E  +   F   K+E   + Y  + ++L
Sbjct: 240  DYQKKKINELVVSARTIRSYPGIYGTIFKFKEGDHREEF---KKEMHLNTYTDESKELKR 296

Query: 1492 YRQHEMQTNVFTKFFDIGKSEKRKFGPG-KSISNCRHSDAIDFAAMSYIWKNIRQQHLPK 1668
              + E + NVF++++      +R+   G K  S+C+H +AI+FAA S +W N   + LP
Sbjct: 297  LAELEHEKNVFSQYYQKKSGNRRENHRGRKKPSSCKHHEAIEFAAKSNLWDNNWDKDLPM 356

Query: 1669 LPKLPNMVLPLPTSMPLDSEICAFYRVLVENKSKYILIACHMNVHGYHRGDLRFLEINES 1848
            LP+   +++PLP S P  +E+C  YRVL+E   KYILIACH+NVHGYHRGDLRFLE+N
Sbjct: 357  LPRSQEIIMPLPASAPAQTEVCGLYRVLMEKNDKYILIACHVNVHGYHRGDLRFLEVNSR 416

Query: 1849 TKLYGFEGRSVIGQLFLGDIVAVTELARCNGHGSDAFKIPFDVSMSSQNTCTWMASKITL 2028
            ++L G   +SVIG LFLGDIVAVTELAR N +   + +     S++ +  C W+ S + L
Sbjct: 417  SRLKGLSEQSVIGSLFLGDIVAVTELAR-NSNAQSSVRDVKVSSVTQETRCYWIVSNMIL 475

Query: 2029 PSRPPPASVLFSFMKNRMAVVKGCDEPMNVEVKSIQNVEPDLIYKGTAFKPEKPELNFTE 2208
              R     V FSF+KNRMAVVKG DEPM V     + V PDLIY G AF P K + NF++
Sbjct: 476  YPRILKPDVTFSFLKNRMAVVKGEDEPMRVNCDDWKTVAPDLIYTGMAFSPIKLDDNFSD 535

Query: 2209 GFIKKKRHQIGSITLRIASYPNSFGTIYNFQESDIDNEHYKIGINAFSEEKFTEISLDER 2388
             F +K ++ + S  L+I+SYPN+FG IY+++E    NE +KIG  A+S+    EI   +R
Sbjct: 536  DFQRKSKNLLISNVLKISSYPNAFGIIYSYEECSEQNEEFKIGTKAYSDT--LEIHKYKR 593

Query: 2389 EKIVETCSLMGFSAANTIFNGRFDCRAFKMEEIKKNGMTVMFCIENPTSQPTLGLWCAGN 2568
            E+IVETCSLMGFSAANTIFNGRFDCRAF M ++ K G TV F IENP ++PTLGLW  GN
Sbjct: 594  ERIVETCSLMGFSAANTIFNGRFDCRAFHMYDVSKEGPTVRFRIENPRNRPTLGLWNNGN 653

Query: 2569 RIVIGGPNGDVNGAIETVI-DDPDIGYLRIAARLSRDIPKKFSFKGDGEFFVSQREVFEN 2745
            +I+IGGP GD NG IETV+ +   +G+L+IAARL+R+ PK F F GD   FVSQRE  ++
Sbjct: 654  KILIGGPTGDTNGTIETVMCNSSHMGWLKIAARLTRECPKDFRFNGD--LFVSQREPKDH 711

Query: 2746 EILDDGYFKTLDPGCNGRRIIETLYGGKPLERVVVDKRDSSIERMMSQLFGVGSGISEHK 2925
              L DGYF+ + P  NGR+IIETLYGGKPLE
Sbjct: 712  YYLYDGYFQDMAPESNGRKIIETLYGGKPLE----------------------------- 742

Query: 2926 TSGKKSEDTPTQFYFPSTPEPLALNKYQCEYVQMLLDGNPLIIGSSPFGCGKSMTIITAA 3105
                ++ D   +++FPSTPEP+ LN +Q EYVQMLLDGNPL+IGSSPFGCGKSMTIITAA
Sbjct: 743  ---LRTGDVGGEYFFPSTPEPIRLNVFQKEYVQMLLDGNPLVIGSSPFGCGKSMTIITAA 799

Query: 3106 LELYKLKKNRK------QLLITQSNYASVNLIDIAQRVCLSGDDDLKDLKFVRFVSEKNW 3267
            LE+YK    R       QLLITQSN+ASVNLI+IA++ C SGD+ L+++KF+RF+++KNW
Sbjct: 800  LEIYKRNAERNLVGKTHQLLITQSNFASVNLIEIARKTCNSGDEKLRNMKFMRFITDKNW 859

Query: 3268 NELPSNCRTDSDMPYLMNKLFKDWAMGRIDLTNLTCLKTHHYVQMVSHIIKNDLVNPMLF 3447
            NE P + RT  DMP+LMNK+FK WA+G +D      L THH   M++HII+N  V
Sbjct: 860  NEQPDHGRTKFDMPFLMNKVFKQWAIGELDGNE---LMTHHTKSMIAHIIRNGTVTVDEL 916

Query: 3448 GDHIAQIYDKLSADFSRAPHAQTLVEAFFMIYKPDLVMVTADSAKGLLNIL--------R 3603
                 +++DK      + P +  L EAFF++Y+PDL+M TADS+K +  +L
Sbjct: 917  CSAARRVFDKYGD--CKIPFSGHLTEAFFILYEPDLIMTTADSSKSVCTLLDKKYETNKN 974

Query: 3604 DVCAVQIDEASQLAECTLLGLLKSFNNASFGLIGDIHQLPPYCEEGLEGKLKDFGIGNTM 3783
            +   VQIDEASQL E TLLGLLK++N A+FGLIGDIHQLPP+C E LEG+LK+FGIGNTM
Sbjct: 975  ECTTVQIDEASQLPEYTLLGLLKTYNKANFGLIGDIHQLPPFCMEELEGRLKEFGIGNTM 1034

Query: 3784 ERAIKEKMFPVCTLRNVYRCHPKTTELLSELFYDGALVSGVSELARSDFMTKRDDFWPNP 3963
            ERAI+ K+FP+  LR VYRCHP+TT LLSELFYDG L+SGV+E  R++FM KR DFWPNP
Sbjct: 1035 ERAIQNKLFPISNLRYVYRCHPQTTALLSELFYDGKLISGVTESQRNEFMIKRKDFWPNP 1094

Query: 3964 KFPMMFVNNTGASTKMGTSTSNSSEKSIVGEIVQNLINDPRNPVNPSDIGVISFYSAQTS 4143
             +P+M +N+ G   +MGTS  N SEK +V  +VQNL++  +  + P DIGVISFY+AQTS
Sbjct: 1095 SYPVMIINHMGTCQRMGTSAQNHSEKDLVSYMVQNLLDQRKYTLKPQDIGVISFYAAQTS 1154

Query: 4144 ILTEHLRGSGVKCGTVDAFQGSEKEIIIMCSTNERISDFMQLSNRLNVAMSRAKQVTIII 4323
            +LTE LR SGVKCGTVDAFQGSEKE+II+C TNE  ++FMQ   RLNVA+SRAKQ T+I+
Sbjct: 1155 LLTEQLRRSGVKCGTVDAFQGSEKEVIILCCTNEHATEFMQCKFRLNVALSRAKQATVIV 1214

Query: 4324 GHLDGLRRANYWSTIVNKIEQNGNL 4398
            G+L  LR+A YW+ IV ++E  GNL
Sbjct: 1215 GNLGYLRKAKYWNAIVKRVEAYGNL 1239


>gi|39579679|emb|CAE56511.1| Hypothetical protein CBG24231
            [Caenorhabditis briggsae]
          Length = 1034

 Score =  791 bits (2044), Expect = 0.0
 Identities = 466/1041 (44%), Positives = 638/1041 (60%), Gaps = 25/1041 (2%)
 Frame = +1

Query: 1498 QHEMQTNVFTKFFDIG---KSEKRKFGPGK---SISNCRHSDAIDFAAMSY-IWKNIRQQ 1656
            Q E   NVFT+F+      K  K+K    +   ++ + +H  A++FA  S  IWK
Sbjct: 9    QEERNKNVFTQFYTPSYQSKQAKKKEVINEVQQALRDYKHKYALNFACTSLLIWKKFVFL 68

Query: 1657 HLPKLPKLPNMVLPLPTSMPLDSEICAFYRVLVENKSKYILIACHMNVHGYHRGDLRFLE 1836
              P+L +  +  +     +P   +  A+YRV+ E   KY+L ACH+NVHGYHRGDLRF+E
Sbjct: 69   DFPELKRSSSQPV---CQIPPTDKAFAYYRVVSEFSDKYLLTACHVNVHGYHRGDLRFIE 125

Query: 1837 INESTKLYGF-EGRSVIGQLFLGDIVAVTELARCNGHGSDAFKIPFDVSMSSQNTCTWMA 2013
            IN  T   G  EG   +G+LF+GDIVAVT +A       + + I FD++  S   CTWMA
Sbjct: 126  INNRTVTRGIPEGEHCLGRLFIGDIVAVTGMAIRKKF--EEYTI-FDITKDSD--CTWMA 180

Query: 2014 SKITLPSRPPPASVLFSFMKNRMAVVKGCDEPMNVEVKSIQNVEPDLIYKGTAFKPEKPE 2193
            + IT+  R       FS +KN  AVVK   E MNV+  S + ++  ++Y G+AF PEK
Sbjct: 181  TNITVLPRSSKKDATFSTLKNGTAVVKEHSEVMNVD--SPKPLKIGILYTGSAFLPEKMA 238

Query: 2194 LNFTEGFIKKKRHQIGSITLRIASYPNSFGTIYNFQESDIDNEHYKIGINAFSEEKFTEI 2373
             N+   F   +++++   + +I  YPN+ GTI+ FQE     + ++IG +AF     +EI
Sbjct: 239  NNYCMDFQPDRKNELIYTSSKIHQYPNALGTIFKFQEDPELTKMFEIGTDAFLCSSASEI 298

Query: 2374 SLDEREKIVETCSLMGFSAANTIFNGRFDCRAFKMEEIKKNGMTVMFCIENPTSQPTLGL 2553
                    +ETC LMG++AAN+I NGRFD R+F ME I + G  V F I+NP   PT G
Sbjct: 299  --------LETCVLMGYAAANSITNGRFDSRSFPMENIDRKGPIVKFQIDNPADNPTEGK 350

Query: 2554 WCAGNRIVIGGPNGDVNGAIETVIDDPDIGYLRIAARLSRDIPKKFSFKGDGEFFVSQRE 2733
            W   +RI I GP G+ N  IETVI   +   L I +RLSRD+P +  F+ +G F V QRE
Sbjct: 351  WTINSRIKISGPTGECNAIIETVILQKN--RLSITSRLSRDVPHREKFQ-EGLFIVYQRE 407

Query: 2734 VFENEILDDGYFKTLDPGCNGRRIIETLYGGKPLERVVVDKRDSSIERMMSQLFGVGSGI 2913
              E++IL  G+F+ +    NGR+I+E LYG  PLE    + ++ +I
Sbjct: 408  APESQILRTGFFEKVPSRSNGRKILEVLYGADPLE----NPKNQAI-------------- 449

Query: 2914 SEHKTSGKKSEDTPTQFYFPSTPEPLALNKYQCEYVQMLLDGN-PLIIGSSPFGCGKSMT 3090
                           Q++FP     L LN YQCEYV MLL+   P+++GSSPFGCGKSMT
Sbjct: 450  --------------FQYFFPGKEGKLKLNYYQCEYVSMLLNPEIPIVVGSSPFGCGKSMT 495

Query: 3091 IITAALELYK--------LKKNRKQLLITQSNYASVNLIDIAQRVCLSGD-DDLKDLKFV 3243
            I+TAALE++K          K ++QLL+TQSNYASVNL+DI+ ++ L    ++ K LKFV
Sbjct: 496  IVTAALEIFKEIDSMKKKKDKKKRQLLVTQSNYASVNLVDISGKIYLEDQQEEDKKLKFV 555

Query: 3244 RFVSEKNWNELPSNCRTDSDMPYLMNKLFKDWA-MGRIDLTNLTCLKTHHYVQMVSHIIK 3420
            RFVSEKNW ELP  C TD D+P LM ++F DWA + R D  +   L+  H   MV  + K
Sbjct: 556  RFVSEKNWKELPLECLTDYDLPMLMEQVFLDWATVERSD--DPVELEDRHKRDMVLFLTK 613

Query: 3421 NDLVNPMLFGDHIAQIYDKLSADFSRAPHAQTLVEAFFMIYKPDLVMVTADSAKGLLNIL 3600
               V+   F     + Y ++  +    P   TL+EAFF++Y PD++M TADS + LL+
Sbjct: 614  EKKVDHSRFNSQALRFYSQVQQE---DPWRSTLLEAFFLLYNPDIIMTTADSLQTLLSSR 670

Query: 3601 ----RDVCAVQIDEASQLAECTLLGLLKSFNNASFGLIGDIHQLPPYCEEGLEGKLKDFG 3768
                 DV  +QIDEASQ+ E T + LL  F  A+FGLIGDI QLPPYCE GL+GKLKD+G
Sbjct: 671  VLTPEDVYTIQIDEASQVPEYTFISLLTQFPKATFGLIGDIQQLPPYCETGLDGKLKDYG 730

Query: 3769 IGNTMERAIKEKMFPVCTLRNVYRCHPKTTELLSELFYDGALVSGVSELARSDFMTKRDD 3948
            IGNTMER ++E++FP   LR VYRCHPK T LLS+LFY G L+SGV+E  R+ FM  R D
Sbjct: 731  IGNTMERCVEEELFPQAMLREVYRCHPKITGLLSDLFYKGKLISGVTEAMRNTFMENRTD 790

Query: 3949 FWPNPKFPMMFVNNTGASTKMGTSTSNSSEKSIVGEIVQNLINDPRN--PVNPSDIGVIS 4122
            FWP+  +P++ +NN  +  KMGTS  N+SEK IV +++ +L+  P N   + P+ IGVIS
Sbjct: 791  FWPSSNYPVLLINNNESGYKMGTSCGNTSEKLIVQKLL-DLLCKPNNGYKLEPTQIGVIS 849

Query: 4123 FYSAQTSILTEHLRGSGVKCGTVDAFQGSEKEIIIMCSTNERISDFMQLSNRLNVAMSRA 4302
            FYSAQTS+LTE LRG  VKCGTVDAFQG+E+++I++C TNE+IS+FMQ+SNR+NVAMSRA
Sbjct: 850  FYSAQTSVLTEALRGRQVKCGTVDAFQGTERDVIVLCCTNEKISEFMQMSNRINVAMSRA 909

Query: 4303 KQVTIIIGHLDGLRRANYWSTIVNKIEQNGNLVNANDWYQNQRRNKVSLSSYPLISTSRQ 4482
            KQVTII+G+L+GL++ANYW  IV K ++N  ++ A        R+ ++ S  P     R+
Sbjct: 910  KQVTIIVGNLNGLKKANYWREIVKKAQENRCVIEA--------RSILNTSGPP---AGRR 958

Query: 4483 SKQQRANEYNSQHKHVKRQSN 4545
             + +R N+ N   K V    N
Sbjct: 959  QRNRRNNKENFAQKKVNFNEN 979



 Score =  136 bits (343), Expect = 4e-30
 Identities = 91/274 (33%), Positives = 144/274 (52%), Gaps = 9/274 (3%)
 Frame = +1

Query: 619  EKSMNIFTKLFRGS----QIRNKNDLPSGRH-LVNYRQNHAFDFAAMSH-IWKENKMENL 780
            E++ N+FT+ +  S    Q + K  +   +  L +Y+  +A +FA  S  IWK+    +
Sbjct: 11   ERNKNVFTQFYTPSYQSKQAKKKEVINEVQQALRDYKHKYALNFACTSLLIWKKFVFLDF 70

Query: 781  PKLPHRANL-VMTLPSSRVRNSKICAFYRVLEKKEDKYILVACHVNIHGFHRGDLRFVEV 957
            P+L   ++  V  +P +     K  A+YRV+ +  DKY+L ACHVN+HG+HRGDLRF+E+
Sbjct: 71   PELKRSSSQPVCQIPPT----DKAFAYYRVVSEFSDKYLLTACHVNVHGYHRGDLRFIEI 126

Query: 958  NNRTVLKGF-ERSSVIGHLFLGDILTVTELTRCNETVSNVASSVEDASPDAPCQWMASKV 1134
            NNRTV +G  E    +G LF+GDI+ VT +    +       ++ D + D+ C WMA+ +
Sbjct: 127  NNRTVTRGIPEGEHCLGRLFIGDIVAVTGMAIRKKFEE---YTIFDITKDSDCTWMATNI 183

Query: 1135 VLFPRHEPVNVQFKFTCNGMASVVSTNEPMSVILNNLTEAKTNVEYTGIAF-KSASYTVH 1311
             + PR    +  F    NG A V   +E M+V  ++    K  + YTG AF        +
Sbjct: 184  TVLPRSSKKDATFSTLKNGTAVVKEHSEVMNV--DSPKPLKIGILYTGSAFLPEKMANNY 241

Query: 1312 TEDYTKKWYERIQEEISNIMIYPKALSTIYQYEE 1413
              D+       +    S I  YP AL TI++++E
Sbjct: 242  CMDFQPDRKNELIYTSSKIHQYPNALGTIFKFQE 275


>gi|39579473|emb|CAE56882.1| Hypothetical protein CBG24721
            [Caenorhabditis briggsae]
          Length = 2174

 Score =  729 bits (1882), Expect = 0.0
 Identities = 409/1009 (40%), Positives = 602/1009 (59%), Gaps = 18/1009 (1%)
 Frame = +1

Query: 1432 VEKQEQEEHPYQQDLEDLDLYRQHEMQTNVFTKFFDIGKSEKRKF------GPGKSISNC 1593
            +E +  +   Y   +E   ++   E++ N F++F+    +    F           ++
Sbjct: 1099 IEHRLTDSKTYLYQMESGKIHFDRELKLNAFSRFYRTAPAPDETFKRTIDSDVQSELNKY 1158

Query: 1594 RHSDAIDFAAMSYIWKNIRQQHLPKLPKLPNMVLPLPTSMPLDSEICAFYRVLVENKSKY 1773
             HSDAI FAA S+ W++   + LP+            T       I A+YRVL +    Y
Sbjct: 1159 THSDAIRFAAKSWTWESNTGEELPRREDKGIQTFRFQTG------IRAYYRVLADKGDSY 1212

Query: 1774 ILIACHMNVHGYHRGDLRFLEINESTKLYGFEGRSVIGQLFLGDIVAVTELARCNGHGSD 1953
            +LIACH N+HGYHRGDLRF+E+N++T+  G    S+IG+L+ GD+VA+ ELA+     +
Sbjct: 1213 VLIACHANLHGYHRGDLRFVEVNDTTETQGMGKSSIIGKLYPGDVVAIVELAKKK---NV 1269

Query: 1954 AFKIPFDVSMSSQNTCTWMASKITLPSRPPPASVLFSFMKNRMAVVKGCDEPMNVEVKSI 2133
                P    +  +  C W    +T+  R     V F+ +++  AVV+G    MNV   S+
Sbjct: 1270 PLNPPGVFQVHPEFECFWEVRHMTILMRKQDREVNFAIIEDGTAVVEGFSRSMNVLDDSL 1329

Query: 2134 QN-VEPDLIYKGTAFKPEKPELNFTEGFIKKKRHQIGSITLRIASYPNSFGTIYNFQESD 2310
               +E + IY G AF PE+ ++NFTE F +K  + + ++  ++ +Y +S GTI+ +  S+
Sbjct: 1330 STPLEVNKIYFGYAFIPERVKMNFTEDFDRKYENLLTALYSKLPTYAHSSGTIFTYAPSE 1389

Query: 2311 IDNEHYKIGINAFSEEKFTEISLDEREKIVETCSLMGFSAANTIFNGRFDCRAFKMEEIK 2490
            +    +KIG +AF +  +  +   +  K+VETC  MG +AA TI N RFD R+F ++ ++
Sbjct: 1390 MQTRFFKIGRDAFCKHAY-RLYGSQPNKVVETCVRMGAAAAQTIGNNRFDERSFPIQSVQ 1448

Query: 2491 KNGMTVMFCIENPTSQPTLGLWCAGNRIVIGGPNGDVNGAIETVIDDPDIGYLRIAARLS 2670
            ++   V F I NP  QPT G W    RIV+ G N  +   IETV+ + D+ ++RI+AR+
Sbjct: 1449 QDDRIVSFAIPNPEKQPTEGRWSNNTRIVLSGTNRKICAIIETVVFENDVNFIRISARIP 1508

Query: 2671 RDIPKKFSFKGDGEFFVSQREVFENEILDDGYFKTLDPGCNGRRIIETLYGGKPLERVVV 2850
            +D  +  +F+ D  + V Q +  E   +D G+   L+   NG RII+TLYGG+ +
Sbjct: 1509 KDSSRNINFRED-TWIVHQGKSPEIPRIDRGFLSRLEENSNGSRIIKTLYGGESINL--- 1564

Query: 2851 DKRDSSIERMMSQLFGVGSGISEHKTSGKKSEDTPTQFYFPSTPEPLALNKYQCEYVQML 3030
               DSS                          D  + F FPS+P  + LN++Q +YV  +
Sbjct: 1565 ---DSS------------------------EIDLNSSFCFPSSPV-IVLNEFQNDYVSKI 1596

Query: 3031 LDGNPLIIGSSPFGCGKSMTIITAALELYKLK-------KNRKQLLITQSNYASVNLIDI 3189
            L   P+++G+SPFGCGKSMTI+TAA+E++K         K R+QLL+TQSN A V+L++I
Sbjct: 1597 LANVPIVLGNSPFGCGKSMTIVTAAIEIHKQNGRFNGHGKQRQQLLVTQSNNAGVSLVEI 1656

Query: 3190 AQRVCLSGDDDLKDLKFVRFVSEKNWNELPSNCRTDSDMPYLMNKLFKDWAMGRIDLTNL 3369
            A+++    D     +KF+R++SE NWN LP + RTD DMP LM  +F  WA+G ++ T
Sbjct: 1657 ARKI----DSSQVKIKFLRYISENNWNVLPDSSRTDLDMPKLMRDMFVPWAIGTVERTTS 1712

Query: 3370 TCLKTHHYVQMVSHIIKNDLVNPMLFGDHIAQIYDKLSA-DFSRAPHAQTLVEAFFMIYK 3546
                T    Q +   +  + + P       ++IYD L+  D    P  +TL EAFF+ Y+
Sbjct: 1713 LNFLTIGMKQAIVRKVAQEYLYPSQLVGEASRIYDTLNEYDKITEPSPRTLREAFFIFYE 1772

Query: 3547 PDLVMVTADSAKGLL--NILRDVCAVQIDEASQLAECTLLGLLKSFNNASFGLIGDIHQL 3720
            PD+++ TADS +GLL  N+   + ++QIDEASQL E TL+ +L+ F +A +GL+GDI QL
Sbjct: 1773 PDIIVSTADSLQGLLSCNLRLQISSIQIDEASQLPEHTLIYILQRFPHAGYGLVGDIKQL 1832

Query: 3721 PPYCEEGLEGKLKDFGIGNTMERAIKEKMFPVCTLRNVYRCHPKTTELLSELFYDGALVS 3900
            PP+CE+ L+G LKD+GIGNTM+RAI E MF    L  VYRCHP TTELLS++FYDG+L+
Sbjct: 1833 PPHCEKELKGLLKDYGIGNTMQRAINELMFLQSNLLYVYRCHPVTTELLSDMFYDGSLIP 1892

Query: 3901 GVSELARSDFMTKRDDFWPNPKFPMMFVNNTGASTKMGTSTSNSSEKSIVGEIVQNLIND 4080
            GVSE  R++FM  R D WPN +FP++ +N  G   K+GTS +N  EK+ V  IV  L  +
Sbjct: 1893 GVSEFDRNEFMRMRPDIWPNVRFPILVLNQKGEGYKVGTSVANEVEKNYVLRIVSMLTRE 1952

Query: 4081 PRN-PVNPSDIGVISFYSAQTSILTEHLRGSGVKCGTVDAFQGSEKEIIIMCSTNERISD 4257
                 +  SDIGVISFY AQTS+LTE  R + VKCGT+DAFQGSEKE+II+C TN++IS
Sbjct: 1953 VNGYRLKESDIGVISFYRAQTSLLTEAFRSTDVKCGTIDAFQGSEKEVIIVCCTNKKISP 2012

Query: 4258 FMQLSNRLNVAMSRAKQVTIIIGHLDGLRRANYWSTIVNKIEQNGNLVN 4404
            FMQL NRLNVA+SR++Q TI+IG++ GLR A YW TIV + ++N  L++
Sbjct: 2013 FMQLGNRLNVALSRSRQATILIGNVAGLREAKYWGTIVREAQENQCLID 2061



 Score =  132 bits (332), Expect = 8e-29
 Identities = 89/295 (30%), Positives = 140/295 (47%), Gaps = 10/295 (3%)
 Frame = +1

Query: 613  EMEKSMNIFTKLFRGSQIRNKN-----DLPSGRHLVNYRQNHAFDFAAMSHIWKENKMEN 777
            + E  +N F++ +R +   ++      D      L  Y  + A  FAA S  W+ N  E
Sbjct: 1121 DRELKLNAFSRFYRTAPAPDETFKRTIDSDVQSELNKYTHSDAIRFAAKSWTWESNTGEE 1180

Query: 778  LPKLPHRANLVMTLPSSRVRNSKICAFYRVLEKKEDKYILVACHVNIHGFHRGDLRFVEV 957
            LP+   +        +       I A+YRVL  K D Y+L+ACH N+HG+HRGDLRFVEV
Sbjct: 1181 LPRREDKGIQTFRFQTG------IRAYYRVLADKGDSYVLIACHANLHGYHRGDLRFVEV 1234

Query: 958  NNRTVLKGFERSSVIGHLFLGDILTVTELTRCNETVSNVASSVEDASPDAPCQWMASKVV 1137
            N+ T  +G  +SS+IG L+ GD++ + EL +      N    V    P+  C W    +
Sbjct: 1235 NDTTETQGMGKSSIIGKLYPGDVVAIVELAKKKNVPLN-PPGVFQVHPEFECFWEVRHMT 1293

Query: 1138 LFPRHEPVNVQFKFTCNGMASVVSTNEPMSVILNNL-TEAKTNVEYTGIAFKSASYTVH- 1311
            +  R +   V F    +G A V   +  M+V+ ++L T  + N  Y G AF      ++
Sbjct: 1294 ILMRKQDREVNFAIIEDGTAVVEGFSRSMNVLDDSLSTPLEVNKIYFGYAFIPERVKMNF 1353

Query: 1312 TEDYTKKWYERIQEEISNIMIYPKALSTIYQY---EEYTPNFVVEKQEQEEHPYQ 1467
            TED+ +K+   +    S +  Y  +  TI+ Y   E  T  F + +    +H Y+
Sbjct: 1354 TEDFDRKYENLLTALYSKLPTYAHSSGTIFTYAPSEMQTRFFKIGRDAFCKHAYR 1408


>gi|39582377|emb|CAE74761.1| Hypothetical protein CBG22588
            [Caenorhabditis briggsae]
          Length = 1187

 Score =  716 bits (1847), Expect = 0.0
 Identities = 423/997 (42%), Positives = 599/997 (59%), Gaps = 29/997 (2%)
 Frame = +1

Query: 1501 HEMQTNVFTKFF--------DIGKS-EKRKFGPGK-SISNCRHSDAIDFAAMSYIW-KNI 1647
            +E  +N F++F+        D G + E    GP +  I    H  AI+FA  S  W K
Sbjct: 42   NEWDSNAFSRFYFFDVRQRRDTGSNGEAEDLGPQQMEIDKYTHRHAINFAGKSLEWAKET 101

Query: 1648 RQQHLPKLPKLPNMVLPLPTSMPLDS--EICAFYRVLVENKSKYILIACHMNVHGYHRGD 1821
             ++     P L   + P       D+   I A+YRV+ E++ KY+L+ACH N+HG+HRGD
Sbjct: 102  SKKRKVLEPTLDAQLAPSRCIFKFDATQSIRAYYRVVSEHEDKYVLMACHTNLHGFHRGD 161

Query: 1822 LRFLEINESTKLYGFEGRSVIGQLFLGDIVAVTELARCNGHGSDAFKIPFDVSMSSQNTC 2001
            LRF+E+N  T   GFE  S++G+LFLGDI+AVT+L++ +    D    P  + M+  +T
Sbjct: 162  LRFVEVNARTVTDGFEKFSIVGKLFLGDILAVTKLSKMSKKPLDP---PKALKMNPDSTM 218

Query: 2002 TWMASKITLPSRPPPASVLFSFMKNRMAVVKGCDEPMNVEVKSIQNVEPDLIYKGTAFKP 2181
             W  +++ +  R      +F+FMK   A+VKG +E   V +     ++ + +Y G+AF P
Sbjct: 219  IWEVAEMRILERKLVHRTVFAFMKCGSAIVKGKNEAAAVLLNDNSPIDLESLYTGSAFIP 278

Query: 2182 EKPELNFTEGFIKKKRHQIGSITLRIASYPNSFGTIYNFQESDIDNEHYKIGINAFSEEK 2361
             K     +  + K+ + ++   + R +S PN+  TIY ++ S    + + I  +AF +
Sbjct: 279  TKLASRISYDYKKEVKSKLLEYSSRFSSCPNALATIYKYELSPELTQKFNIRKDAFKQST 338

Query: 2362 FTEISLDEREKIVETCSLMGFSAANTIFNGRFDCRAFKMEEIKKNGMTVMFCIENPTSQP 2541
                   + E+I E C+ MG SA  T+ +GR D R F M    K    V F I NP   P
Sbjct: 339  -------DSEEITELCTQMGQSAVLTLSDGRADSRMFPMLNPVKEEEGVKFSISNPLKYP 391

Query: 2542 TLGLWCAGNRIVIGGPNGDVNGAIETVIDDPDIGYLRIAARLSRDIPKKFSFKGDGEFFV 2721
            T GLW   NR+   G  G ++  IETVI  P+   L+I AR+S++  ++ +F+ +G F V
Sbjct: 392  TEGLWNCSNRVRFEGMCGKIDATIETVI--PEENVLKIYARVSKESLRRLNFR-EGTFVV 448

Query: 2722 SQREVFENEILDDGYFKTLDPGCNGRRIIETLYGGKPLERVVVDKRDSSIERMMSQLFGV 2901
             QRE  E  +L+DGY + L     GR+IIE LYGG  L      KRD SI
Sbjct: 449  YQREAREATMLEDGYLRKLHSSRKGRQIIEALYGGVSL------KRDLSI---------- 492

Query: 2902 GSGISEHKTSGKKSEDTPTQFYFPSTPEPLALNKYQCEYVQMLLDGN-PLIIGSSPFGCG 3078
              G + H               FPS P P +LN++Q +YV M+     P+++GSSPFGCG
Sbjct: 493  -LGPAPH-------------CIFPSDP-PTSLNEFQNQYVSMMTSSYYPMLLGSSPFGCG 537

Query: 3079 KSMTIITAALELYKLKKNRKQLLITQSNYASVNLIDIAQRVCLSGDDDLKDLKFVRFVSE 3258
            KSMTI+ AA+E  K  ++ +Q LIT+SNYASVNLIDIA++V  S       +K +R+V+E
Sbjct: 538  KSMTIVMAAIEKCKRHESSQQFLITESNYASVNLIDIARKVKKS------KMKIMRYVTE 591

Query: 3259 KNWNELPSNCRTDSDMPYLMNKLFKDWAMGRIDLTNLTCLKTHHYVQMVSHIIKNDLVNP 3438
             NW ELP +CRT+ D+P LM+ +FK  A G I     T + T   + +   I K + +
Sbjct: 592  SNWKELPEHCRTEYDLPVLMSAIFKQLAHGEIGNRESTSI-TEKMIILAYLISKKEFMED 650

Query: 3439 MLFGDHIAQIYDKLSADFSRAPHAQTLVEAFFMI---YKPDLVMVTADSAKGLLN--ILR 3603
            +L    +   +    +D    P  +   EAF ++   YKP+++++TAD+ + ++N  +
Sbjct: 651  LL-SSPLKTFHSNYKSDVEDYPIQRRNREAFEILLRFYKPNVIVITADTLQSMMNCSVYF 709

Query: 3604 DVCAVQIDEASQLAECTLLGLLKSFNNASFGLIGDIHQLPPYCEEGLEGKLKDFGIGNTM 3783
            +V  +QIDEA QL ECTL+ LL+ F NA++GLIGDI QLPPYCE+ L+GKLK++GIGNTM
Sbjct: 710  NVVMIQIDEACQLPECTLISLLRLFPNANYGLIGDIKQLPPYCEDELKGKLKEYGIGNTM 769

Query: 3784 ERAIKEKMFPVCTLRNVYRCHPKTTELLSELFYDGALVSGVSELARSDFMTKRDDFWPNP 3963
            ERAI+EKMFP   LR VYRCHPK TELLSELFYDG L+SGV E+ R++FM +R DFWPNP
Sbjct: 770  ERAIEEKMFPEAILRYVYRCHPKITELLSELFYDGNLISGVEEIQRNEFMRRRQDFWPNP 829

Query: 3964 KFPMMFVNNTGASTKMGTSTSNSSEKSIVGEIVQNLINDPRN-PVNPSDIGVISFYSAQT 4140
             +P++ V+N   + K+GTS  N +EK +  +IV+ L+ +     + PSDIGVISFY+ QT
Sbjct: 830  HYPIIVVHNRDKAYKIGTSCGNRTEKILAKQIVKELLKEENGYQLKPSDIGVISFYAGQT 889

Query: 4141 S---------ILTEHLRGSGVKCGTVDAFQGSEKEIIIMCSTNERISDFMQLSNRLNVAM 4293
            S         +L++  RG+GV CGTVDAFQGSE+E+II+C TNERIS+FMQLSNRLNVAM
Sbjct: 890  SAETLKFCFPVLSDSFRGTGVNCGTVDAFQGSEREVIILCCTNERISEFMQLSNRLNVAM 949

Query: 4294 SRAKQVTIIIGHLDGLRRANYWSTIVNKIEQNGNLVN 4404
            SRA+Q TIIIG+  GL  A YWS IV K+E+NG +V+
Sbjct: 950  SRARQATIIIGNSIGLSEAKYWSQIVKKVEENGGVVD 986



 Score =  149 bits (376), Expect = 6e-34
 Identities = 99/278 (35%), Positives = 144/278 (51%), Gaps = 11/278 (3%)
 Frame = +1

Query: 685  PSGRHLVNYRQNHAFDFAAMSHIWKENKMENLPKLPHRANLVMTLPSSRV-----RNSKI 849
            P    +  Y   HA +FA  S  W +   +    L     L   L  SR          I
Sbjct: 74   PQQMEIDKYTHRHAINFAGKSLEWAKETSKKRKVL--EPTLDAQLAPSRCIFKFDATQSI 131

Query: 850  CAFYRVLEKKEDKYILVACHVNIHGFHRGDLRFVEVNNRTVLKGFERSSVIGHLFLGDIL 1029
             A+YRV+ + EDKY+L+ACH N+HGFHRGDLRFVEVN RTV  GFE+ S++G LFLGDIL
Sbjct: 132  RAYYRVVSEHEDKYVLMACHTNLHGFHRGDLRFVEVNARTVTDGFEKFSIVGKLFLGDIL 191

Query: 1030 TVTELTRCNETVSNVASSVEDASPDAPCQWMASKVVLFPRHEPVNVQFKFTCNGMASVVS 1209
             VT+L++ ++   +   +++  +PD+   W  +++ +  R       F F   G A V
Sbjct: 192  AVTKLSKMSKKPLDPPKALK-MNPDSTMIWEVAEMRILERKLVHRTVFAFMKCGSAIVKG 250

Query: 1210 TNEPMSVILNNLTEAKTNVEYTGIAF---KSASYTVHTEDYTKKWYERIQEEISNIMIYP 1380
             NE  +V+LN+ +       YTG AF   K AS   +  DY K+   ++ E  S     P
Sbjct: 251  KNEAAAVLLNDNSPIDLESLYTGSAFIPTKLASRISY--DYKKEVKSKLLEYSSRFSSCP 308

Query: 1381 KALSTIYQYE---EYTPNFVVEKQEQEEHPYQQDLEDL 1485
             AL+TIY+YE   E T  F + K   ++    +++ +L
Sbjct: 309  NALATIYKYELSPELTQKFNIRKDAFKQSTDSEEITEL 346


>gi|34555849|emb|CAA99786.2| Hypothetical protein C44H9.4
            [Caenorhabditis elegans]
          Length = 1099

 Score =  683 bits (1763), Expect = 0.0
 Identities = 428/1125 (38%), Positives = 624/1125 (55%), Gaps = 36/1125 (3%)
 Frame = +1

Query: 1321 YTKKWYERIQEEISNIMIYPKALSTIYQYEEYTPNFVVEKQEQEEHPYQQDLEDLDLYRQ 1500
            Y   +Y R  EE  +          + QY  +T +    K  Q        +++  +Y +
Sbjct: 26   YNNSYYRRDYEEEED---------DVQQY--HTSHIASIKSSQTTSYRSSVVQNSSVYSR 74

Query: 1501 --HEMQTNVFTKFF----DIGKSEKRKFG----PGKSISNCRHSDAIDFAAMSYIWKNIR 1650
               E + N F+KF+    +    +K+K        K + + +HSDAI+FAA ++ W
Sbjct: 75   TFSEKEQNAFSKFYVQPPETNSRQKKKTEIESEVEKELKSYKHSDAINFAARTFSWGP-- 132

Query: 1651 QQHLPKLPKLPNMVLPLPTSMPLDSEICAFYRVLVENKSKYILIACHMNVHGYHRGDLRF 1830
              + PK    P  V    ++   +  I A++RVL    +KYILIACH N+HG HRGDLRF
Sbjct: 133  NFNSPK----PRQVFRDISTYSYERGIRAYFRVLSAEDNKYILIACHANLHGLHRGDLRF 188

Query: 1831 LEINESTKLYGFEGRSVIGQLFLGDIVAVTELARCNGHGSDAFKIPFDVSMSSQNTCTWM 2010
            +E+N+ T   G E  SVIG LF GD+VAVTEL++ +   S A   P   ++S  + C W
Sbjct: 189  VEVNDRTITKGSENYSVIGMLFPGDVVAVTELSKKSNAPSIA---PTIKNVSPHDPCIWE 245

Query: 2011 ASKITLPSRPPPASVLFSFMKNRMAVVKGCDEPMNVEVKSIQNVEPDLIYKGTAFKPEKP 2190
             +K+ +  R     V F+ + N  A+V+G  E M+V     + ++ D++Y GTAF PEK
Sbjct: 246  VNKMVVLQRKSIIRVNFAMLNNGAAIVEGHTEAMDVIEIDRKKLKTDMMYYGTAFIPEKS 305

Query: 2191 ELNFTEGFIKKKRHQIGSITLRIASYPNSFGTIYNFQESDIDNEHYKIGINAFSEEKFTE 2370
            ++ F+EGF ++    + ++T ++ SY NS GTIY     +     +KIG++AF+   ++
Sbjct: 306  KVKFSEGFHRQHWEDLMALTSKLPSYSNSLGTIYTHSLCERQTNMFKIGVDAFNSSIYS- 364

Query: 2371 ISLDEREKIVETCSLMGFSAANTIFNGRFDCRAFKMEEIKKNGMTVMFCIENPTSQPTLG 2550
            ++ +    + + C +MG SAA T+ NGRFD R F+M  I +      F I+NP+ QPT G
Sbjct: 365  LNTEASVLVAQKCVIMGSSAAQTVSNGRFDGRNFQMTNIHRKSQNFRFSIDNPSKQPTEG 424

Query: 2551 LWCAGNRIVIGGPNGDVNGAIETVIDDPDIGYLRIAARLSRDIPKKFSFKGDGEFFVSQR 2730
             W    +I I G    +  +IETV+   +   L I A + ++  K  +F+  G + VSQ
Sbjct: 425  RWNPNQKIEINGQGESLKTSIETVVLGNNRKSLEITATIPKNNNKLLNFQ-TGTWIVSQS 483

Query: 2731 EVFENEILDDGYFKTLDPGCNGRRIIETLYGGKPLERVVVDKRDSSIERMMSQLFGVGSG 2910
            +  E   LD  + + + P  NGRRI+  LYGG P+
Sbjct: 484  QFLETPRLDCEFLQKMSPSSNGRRIVTALYGGSPINST--------------------GN 523

Query: 2911 ISEHKTSGKKSEDTPTQFYFPSTPEPLALNKYQCEYVQMLLDGNPLIIGSSPFGCGKSMT 3090
            I+ +K           QF FPS   P+ LN+YQ +YV M+L G PLI+G+SPFGCGKSMT
Sbjct: 524  INWNK-----------QFEFPSKI-PIGLNQYQNQYVSMILSGVPLILGNSPFGCGKSMT 571

Query: 3091 IITAALELYKLKK-----NRKQLLITQSNYASVNLIDIAQRVCLSGDDDLKDLKFVRFVS 3255
            I+TAA+EL K        N++QLL+TQSN A VNLI+ A ++          ++F+R+VS
Sbjct: 572  IVTAAVELQKKYMRSESFNKQQLLVTQSNNAGVNLIEFALKL-----HKCDHIRFLRYVS 626

Query: 3256 EKNWNELPSNCRTDSDMPYLMNKLFKDWAMG-RIDLTNLTCLKTHHYVQMVSHIIKNDLV 3432
            E NWN LP + +T+ DMP LM   F +WA    I   N   L       +V    +
Sbjct: 627  ESNWNSLPDSSKTELDMPILMEDEFFEWATNTEIQKENGENLTREMKKAIVEQSTQKYHC 686

Query: 3433 NPMLFGDHIAQIYDK-LSADFSRAPHAQTLVEAFFMIYKPDLVMVTADSAKGLL--NILR 3603
              +L G+   +IY+  L       P    L EAFF +Y PD+++ TADS   LL  N+LR
Sbjct: 687  KGILVGE-AKRIYENILKNQREHKPSQAILKEAFFALYAPDIIVSTADSIHNLLENNVLR 745

Query: 3604 DVCAVQIDEASQLAECTLLGLLKSFNNASFGLIGDIHQLPPYCEEGLEGKLKDFGIGNTM 3783
            DV  +Q DEASQ+ E TL+ LL  F NASFGL+GDI+QLP YC++ L+G LKD+GIG TM
Sbjct: 746  DVSNIQFDEASQVPEHTLISLLHKFPNASFGLVGDINQLPAYCDDDLQGLLKDYGIGKTM 805

Query: 3784 ERAIKEKMFPVCTLRNVYRCHPKTTELLSELFYDGALVSGVSELARSDFMTKRDDFWPNP 3963
             RA ++KMFP   LR VYRCHP TT++LS+LFY+G L+SGV +  R +FM  R D WPN
Sbjct: 806  ARASRDKMFPQSILRLVYRCHPTTTKILSDLFYNGQLISGVEKNQRDEFMRMRPDIWPNS 865

Query: 3964 KFPMMFVNNTGASTKMGTSTSNSSEKSIVGEIVQNLINDPRN-PVNPSDIGVISFYSAQT 4140
             FP++ +N+     +MGTS +N+SEK  V  IV  L    +   ++ SDIG+ISFY AQT
Sbjct: 866  SFPILVLNHEKDGYRMGTSVANNSEKDQVVRIVSLLTKKVKGYGLSESDIGIISFYKAQT 925

Query: 4141 SILTEHLRGSGVKCGTVDAFQGSEKEIIIMCSTNERISDFMQLSNRLNVAMSRAKQVTII 4320
            S+L + L+ + VKCGT+DAFQG+E+E++I+C TN+  S FMQ   R+NVAMSRA+Q TII
Sbjct: 926  SLLADALKKTDVKCGTIDAFQGTEREVMIVCCTNKNPSLFMQEGTRVNVAMSRARQATII 985

Query: 4321 IGHLDGLRRANYWSTI-----VNKIEQNGNLVNANDWYQNQ---------RRNKV--SLS 4452
            IG++  L++A +W TI     +NK     +    ++  Q Q         + NK+  + +
Sbjct: 986  IGNIAKLKKAKHWDTIAQSAQINKCSMEVSTFGGSEQKQPQMVQIKCTAKKSNKIQKNQN 1045

Query: 4453 SYPLISTSRQSKQQRANEYNSQHKHVKRQSNNDYGSQRSVTNSLN 4587
                IS S+  K +   E +S+ +  +R+ N +   Q S     N
Sbjct: 1046 EGKHISISQTVKTKEDTEQSSKPQQRRRRRNRNNIGQNSTNGRKN 1090



 Score =  157 bits (398), Expect = 2e-36
 Identities = 98/271 (36%), Positives = 147/271 (54%), Gaps = 8/271 (2%)
 Frame = +1

Query: 619  EKSMNIFTKLF-----RGSQIRNKNDLPSG--RHLVNYRQNHAFDFAAMSHIWKENKMEN 777
            EK  N F+K +       S+ + K ++ S   + L +Y+ + A +FAA +  W  N   N
Sbjct: 78   EKEQNAFSKFYVQPPETNSRQKKKTEIESEVEKELKSYKHSDAINFAARTFSWGPNF--N 135

Query: 778  LPKLPHRANLVMTLPSSRVRNSKICAFYRVLEKKEDKYILVACHVNIHGFHRGDLRFVEV 957
             PK       + T    R     I A++RVL  +++KYIL+ACH N+HG HRGDLRFVEV
Sbjct: 136  SPKPRQVFRDISTYSYER----GIRAYFRVLSAEDNKYILIACHANLHGLHRGDLRFVEV 191

Query: 958  NNRTVLKGFERSSVIGHLFLGDILTVTELTRCNETVSNVASSVEDASPDAPCQWMASKVV 1137
            N+RT+ KG E  SVIG LF GD++ VTEL++      ++A ++++ SP  PC W  +K+V
Sbjct: 192  NDRTITKGSENYSVIGMLFPGDVVAVTELSK-KSNAPSIAPTIKNVSPHDPCIWEVNKMV 250

Query: 1138 LFPRHEPVNVQFKFTCNGMASVVSTNEPMSVILNNLTEAKTNVEYTGIAF-KSASYTVHT 1314
            +  R   + V F    NG A V    E M VI  +  + KT++ Y G AF    S    +
Sbjct: 251  VLQRKSIIRVNFAMLNNGAAIVEGHTEAMDVIEIDRKKLKTDMMYYGTAFIPEKSKVKFS 310

Query: 1315 EDYTKKWYERIQEEISNIMIYPKALSTIYQY 1407
            E + ++ +E +    S +  Y  +L TIY +
Sbjct: 311  EGFHRQHWEDLMALTSKLPSYSNSLGTIYTH 341


>gi|17558612|ref|NP_506213.1| regulator of nonsense transcripts family
            member (5N319) [Caenorhabditis elegans]
 gi|7497439|pir||T19948 hypothetical protein C44H9.4 - Caenorhabditis
            elegans
          Length = 1106

 Score =  680 bits (1754), Expect = 0.0
 Identities = 412/1043 (39%), Positives = 593/1043 (56%), Gaps = 20/1043 (1%)
 Frame = +1

Query: 1321 YTKKWYERIQEEISNIMIYPKALSTIYQYEEYTPNFVVEKQEQEEHPYQQDLEDLDLYRQ 1500
            Y   +Y R  EE  +          + QY  +T +    K  Q        +++  +Y +
Sbjct: 26   YNNSYYRRDYEEEED---------DVQQY--HTSHIASIKSSQTTSYRSSVVQNSSVYSR 74

Query: 1501 --HEMQTNVFTKFF----DIGKSEKRKFG----PGKSISNCRHSDAIDFAAMSYIWKNIR 1650
               E + N F+KF+    +    +K+K        K + + +HSDAI+FAA ++ W
Sbjct: 75   TFSEKEQNAFSKFYVQPPETNSRQKKKTEIESEVEKELKSYKHSDAINFAARTFSWGP-- 132

Query: 1651 QQHLPKLPKLPNMVLPLPTSMPLDSEICAFYRVLVENKSKYILIACHMNVHGYHRGDLRF 1830
              + PK    P  V    ++   +  I A++RVL    +KYILIACH N+HG HRGDLRF
Sbjct: 133  NFNSPK----PRQVFRDISTYSYERGIRAYFRVLSAEDNKYILIACHANLHGLHRGDLRF 188

Query: 1831 LEINESTKLYGFEGRSVIGQLFLGDIVAVTELARCNGHGSDAFKIPFDVSMSSQNTCTWM 2010
            +E+N+ T   G E  SVIG LF GD+VAVTEL++ +   S A   P   ++S  + C W
Sbjct: 189  VEVNDRTITKGSENYSVIGMLFPGDVVAVTELSKKSNAPSIA---PTIKNVSPHDPCIWE 245

Query: 2011 ASKITLPSRPPPASVLFSFMKNRMAVVKGCDEPMNVEVKSIQNVEPDLIYKGTAFKPEKP 2190
             +K+ +  R     V F+ + N  A+V+G  E M+V     + ++ D++Y GTAF PEK
Sbjct: 246  VNKMVVLQRKSIIRVNFAMLNNGAAIVEGHTEAMDVIEIDRKKLKTDMMYYGTAFIPEKS 305

Query: 2191 ELNFTEGFIKKKRHQIGSITLRIASYPNSFGTIYNFQESDIDNEHYKIGINAFSEEKFTE 2370
            ++ F+EGF ++    + ++T ++ SY NS GTIY     +     +KIG++AF+   ++
Sbjct: 306  KVKFSEGFHRQHWEDLMALTSKLPSYSNSLGTIYTHSLCERQTNMFKIGVDAFNSSIYS- 364

Query: 2371 ISLDEREKIVETCSLMGFSAANTIFNGRFDCRAFKMEEIKKNGMTVMFCIENPTSQPTLG 2550
            ++ +    + + C +MG SAA T+ NGRFD R F+M  I +      F I+NP+ QPT G
Sbjct: 365  LNTEASVLVAQKCVIMGSSAAQTVSNGRFDGRNFQMTNIHRKSQNFRFSIDNPSKQPTEG 424

Query: 2551 LWCAGNRIVIGGPNGDVNGAIETVIDDPDIGYLRIAARLSRDIPKKFSFKGDGEFFVSQR 2730
             W    +I I G    +  +IETV+   +   L I A + ++  K  +F+  G + VSQ
Sbjct: 425  RWNPNQKIEINGQGESLKTSIETVVLGNNRKSLEITATIPKNNNKLLNFQ-TGTWIVSQS 483

Query: 2731 EVFENEILDDGYFKTLDPGCNGRRIIETLYGGKPLERVVVDKRDSSIERMMSQLFGVGSG 2910
            +  E   LD  + + + P  NGRRI+  LYGG P+
Sbjct: 484  QFLETPRLDCEFLQKMSPSSNGRRIVTALYGGSPINST--------------------GN 523

Query: 2911 ISEHKTSGKKSEDTPTQFYFPSTPEPLALNKYQCEYVQMLLDGNPLIIGSSPFGCGKSMT 3090
            I+ +K           QF FPS   P+ LN+YQ +YV M+L G PLI+G+SPFGCGKSMT
Sbjct: 524  INWNK-----------QFEFPSKI-PIGLNQYQNQYVSMILSGVPLILGNSPFGCGKSMT 571

Query: 3091 IITAALELYKLKK-----NRKQLLITQSNYASVNLIDIAQRVCLSGDDDLKDLKFVRFVS 3255
            I+TAA+EL K        N++QLL+TQSN A VNLI+ A ++          ++F+R+VS
Sbjct: 572  IVTAAVELQKKYMRSESFNKQQLLVTQSNNAGVNLIEFALKL-----HKCDHIRFLRYVS 626

Query: 3256 EKNWNELPSNCRTDSDMPYLMNKLFKDWAMG-RIDLTNLTCLKTHHYVQMVSHIIKNDLV 3432
            E NWN LP + +T+ DMP LM   F +WA    I   N   L       +V    +
Sbjct: 627  ESNWNSLPDSSKTELDMPILMEDEFFEWATNTEIQKENGENLTREMKKAIVEQSTQKYHC 686

Query: 3433 NPMLFGDHIAQIYDK-LSADFSRAPHAQTLVEAFFMIYKPDLVMVTADSAKGLL--NILR 3603
              +L G+   +IY+  L       P    L EAFF +Y PD+++ TADS   LL  N+LR
Sbjct: 687  KGILVGE-AKRIYENILKNQREHKPSQAILKEAFFALYAPDIIVSTADSIHNLLENNVLR 745

Query: 3604 DVCAVQIDEASQLAECTLLGLLKSFNNASFGLIGDIHQLPPYCEEGLEGKLKDFGIGNTM 3783
            DV  +Q DEASQ+ E TL+ LL  F NASFGL+GDI+QLP YC++ L+G LKD+GIG TM
Sbjct: 746  DVSNIQFDEASQVPEHTLISLLHKFPNASFGLVGDINQLPAYCDDDLQGLLKDYGIGKTM 805

Query: 3784 ERAIKEKMFPVCTLRNVYRCHPKTTELLSELFYDGALVSGVSELARSDFMTKRDDFWPNP 3963
             RA ++KMFP   LR VYRCHP TT++LS+LFY+G L+SGV +  R +FM  R D WPN
Sbjct: 806  ARASRDKMFPQSILRLVYRCHPTTTKILSDLFYNGQLISGVEKNQRDEFMRMRPDIWPNS 865

Query: 3964 KFPMMFVNNTGASTKMGTSTSNSSEKSIVGEIVQNLINDPRN-PVNPSDIGVISFYSAQT 4140
             FP++ +N+     +MGTS +N+SEK  V  IV  L    +   ++ SDIG+ISFY AQT
Sbjct: 866  SFPILVLNHEKDGYRMGTSVANNSEKDQVVRIVSLLTKKVKGYGLSESDIGIISFYKAQT 925

Query: 4141 SILTEHLRGSGVKCGTVDAFQGSEKEIIIMCSTNERISDFMQLSNRLNVAMSRAKQVTII 4320
            S+L + L+ + VKCGT+DAFQG+E+E++I+C TN+  S FMQ   R+NVAMSRA+Q TII
Sbjct: 926  SLLADALKKTDVKCGTIDAFQGTEREVMIVCCTNKNPSLFMQEGTRVNVAMSRARQATII 985

Query: 4321 IGHLDGLRRANYWSTIVNKIEQN 4389
            IG++  L++A +W TI    + N
Sbjct: 986  IGNIAKLKKAKHWDTIAQSAQIN 1008



 Score =  157 bits (398), Expect = 2e-36
 Identities = 98/271 (36%), Positives = 147/271 (54%), Gaps = 8/271 (2%)
 Frame = +1

Query: 619  EKSMNIFTKLF-----RGSQIRNKNDLPSG--RHLVNYRQNHAFDFAAMSHIWKENKMEN 777
            EK  N F+K +       S+ + K ++ S   + L +Y+ + A +FAA +  W  N   N
Sbjct: 78   EKEQNAFSKFYVQPPETNSRQKKKTEIESEVEKELKSYKHSDAINFAARTFSWGPNF--N 135

Query: 778  LPKLPHRANLVMTLPSSRVRNSKICAFYRVLEKKEDKYILVACHVNIHGFHRGDLRFVEV 957
             PK       + T    R     I A++RVL  +++KYIL+ACH N+HG HRGDLRFVEV
Sbjct: 136  SPKPRQVFRDISTYSYER----GIRAYFRVLSAEDNKYILIACHANLHGLHRGDLRFVEV 191

Query: 958  NNRTVLKGFERSSVIGHLFLGDILTVTELTRCNETVSNVASSVEDASPDAPCQWMASKVV 1137
            N+RT+ KG E  SVIG LF GD++ VTEL++      ++A ++++ SP  PC W  +K+V
Sbjct: 192  NDRTITKGSENYSVIGMLFPGDVVAVTELSK-KSNAPSIAPTIKNVSPHDPCIWEVNKMV 250

Query: 1138 LFPRHEPVNVQFKFTCNGMASVVSTNEPMSVILNNLTEAKTNVEYTGIAF-KSASYTVHT 1314
            +  R   + V F    NG A V    E M VI  +  + KT++ Y G AF    S    +
Sbjct: 251  VLQRKSIIRVNFAMLNNGAAIVEGHTEAMDVIEIDRKKLKTDMMYYGTAFIPEKSKVKFS 310

Query: 1315 EDYTKKWYERIQEEISNIMIYPKALSTIYQY 1407
            E + ++ +E +    S +  Y  +L TIY +
Sbjct: 311  EGFHRQHWEDLMALTSKLPSYSNSLGTIYTH 341




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