Homology by BLASTX


BLASTX 2.2.4 [Aug-26-2002]
Query= C04G2_6
         (3090 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|17538438|ref|NP_501835.1| mitotic control protein dis3 (116.7...  1977   0.0
gi|39587884|emb|CAE67902.1| Hypothetical protein CBG13499 [Caeno...  1641   0.0
gi|31210245|ref|XP_314089.1| ENSANGP00000003705 [Anopheles gambi...   619   e-175
gi|33440520|gb|AAH56143.1| KIAA1008 [Homo sapiens]                    574   e-162
gi|19923416|ref|NP_055768.2| KIAA1008; mitotic control protein d...   573   e-162
gi|24649634|ref|NP_651246.2| CG6413-PA [Drosophila melanogaster]...   565   e-159
gi|50730733|ref|XP_417016.1| PREDICTED: similar to KIAA1008; mit...   564   e-159
gi|15292611|gb|AAK93574.1| SD10981p [Drosophila melanogaster]         564   e-159
gi|7451876|pir||JE0110 mitotic control protein dis3 homolog - human   557   e-157
gi|13446610|emb|CAC35051.1| putative exoribonuclease DIS3 [Droso...   545   e-153
gi|46437964|gb|EAK97302.1| hypothetical protein CaO19.5229 [Cand...   533   e-149
gi|48142866|ref|XP_397381.1| similar to SD10981p [Apis mellifera]     531   e-149
gi|50426721|ref|XP_461958.1| unnamed protein product [Debaryomyc...   528   e-148
gi|7674415|sp|Q9Y2L1|RR44_HUMAN Exosome complex exonuclease RRP4...   526   e-148
gi|40789019|dbj|BAA76852.2| KIAA1008 protein [Homo sapiens]           526   e-148
gi|34874568|ref|XP_224449.2| similar to mitotic control protein ...   526   e-147
gi|50289115|ref|XP_446987.1| unnamed protein product [Candida gl...   519   e-145
gi|50303069|ref|XP_451472.1| unnamed protein product [Kluyveromy...   519   e-145
gi|6324552|ref|NP_014621.1| Nucleolar exosome component, involve...   516   e-144
gi|49074354|ref|XP_401317.1| hypothetical protein UM03702.1 [Ust...   503   e-141
gi|46108604|ref|XP_381360.1| conserved hypothetical protein [Gib...   500   e-140
gi|19113445|ref|NP_596653.1| mitotic control protein dis3 [Schiz...   496   e-138
gi|38101593|gb|EAA48535.1| hypothetical protein MG00193.4 [Magna...   493   e-138
gi|32420115|ref|XP_330501.1| hypothetical protein [Neurospora cr...   491   e-137
gi|50552065|ref|XP_503507.1| hypothetical protein [Yarrowia lipo...   479   e-133
gi|18398450|ref|NP_565418.1| ribonuclease II family protein [Ara...   471   e-131
gi|49092666|ref|XP_407794.1| hypothetical protein AN3657.2 [Aspe...   470   e-130
gi|25332397|pir||A84553 probable mitotic control protein dis3 [i...   468   e-130
gi|26327903|dbj|BAC27692.1| unnamed protein product [Mus musculus]    461   e-128
gi|45190576|ref|NP_984830.1| AEL031Cp [Eremothecium gossypii] >g...   454   e-126
gi|5262619|emb|CAB45749.1| hypothetical protein [Homo sapiens]        449   e-124
gi|6063541|dbj|BAA85401.1| EST AU068209(C12438) corresponds to a...   444   e-123
gi|50258254|gb|EAL20945.1| hypothetical protein CNBD5470 [Crypto...   419   e-115
gi|23306125|gb|AAN17392.1| Putative mitotic control protein dis3...   397   e-108
gi|39930443|ref|NP_082591.1| RIKEN cDNA 2810028N01 [Mus musculus...   393   e-107
gi|14250908|emb|CAC39259.1| Rrp44p homologue [Trypanosoma brucei]     362   3e-98
gi|37360182|dbj|BAC98069.1| mKIAA1008 protein [Mus musculus]          359   3e-97
gi|50753236|ref|XP_413917.1| PREDICTED: similar to hypothetical ...   336   2e-90
gi|47213260|emb|CAF92921.1| unnamed protein product [Tetraodon n...   321   8e-86
gi|34864185|ref|XP_343409.1| similar to expressed sequence AV340...   310   2e-82
gi|50511205|dbj|BAD32588.1| mKIAA1955 protein [Mus musculus]          304   7e-81
gi|49119586|gb|AAH73711.1| Unknown (protein for MGC:83653) [Xeno...   298   5e-79
gi|27369724|ref|NP_766107.1| expressed sequence AV340375 [Mus mu...   295   6e-78
gi|19115966|ref|NP_588616.1| hypothetical protein MGC4562 [Homo ...   291   7e-77
gi|18916779|dbj|BAB85541.1| KIAA1955 protein [Homo sapiens]           285   5e-75
gi|21754656|dbj|BAC04542.1| unnamed protein product [Homo sapiens]    276   3e-72
gi|23619510|ref|NP_705472.1| mitotic control protein dis3 homolo...   268   8e-70
gi|19173030|ref|NP_597581.1| similarity to DIS3 PROTEIN (RNASE I...   253   3e-65
gi|47218167|emb|CAG10087.1| unnamed protein product [Tetraodon n...   248   8e-64
gi|24233556|ref|NP_705758.1| RIKEN cDNA 4930429A22 [Mus musculus...   225   6e-57
gi|26327097|dbj|BAC27292.1| unnamed protein product [Mus musculus]    225   6e-57
gi|49069092|ref|XP_398835.1| hypothetical protein UM01220.1 [Ust...   218   9e-55
gi|19115422|ref|NP_594510.1| ribonuclease II RNB family protein;...   215   6e-54
gi|26325590|dbj|BAC26549.1| unnamed protein product [Mus musculus]    214   1e-53
gi|50256896|gb|EAL19614.1| hypothetical protein CNBG2420 [Crypto...   209   4e-52
gi|17553506|ref|NP_498160.1| ribonuclease II (3G535) [Caenorhabd...   208   6e-52
gi|40225951|gb|AAH14124.2| MGC4562 protein [Homo sapiens]             196   3e-48
gi|23483136|gb|EAA18906.1| probable mitotic control protein dis3...   195   6e-48
gi|21673344|ref|NP_661409.1| ribonuclease II family protein [Chl...   187   1e-45
gi|46805940|dbj|BAD17234.1| putative Ribosomal RNA processing pr...   181   7e-44
gi|25406521|pir||E96806 hypothetical protein T32E8.1 [imported] ...   177   2e-42
gi|15220899|ref|NP_177891.1| ribonuclease II family protein [Ara...   177   2e-42
gi|34541350|ref|NP_905829.1| ribonuclease R [Porphyromonas gingi...   174   2e-41
gi|48855896|ref|ZP_00310054.1| COG0557: Exoribonuclease R [Cytop...   172   6e-41
gi|29247168|gb|EAA38740.1| GLP_436_41516_39297 [Giardia lamblia ...   171   1e-40
gi|29348486|ref|NP_811989.1| ribonuclease R [Bacteroides thetaio...   170   2e-40
gi|31198979|ref|XP_308437.1| ENSANGP00000018470 [Anopheles gambi...   170   2e-40
gi|47156994|gb|AAT12366.1| DIS3 protein-like protein [Antonospor...   161   1e-37
gi|46125263|ref|XP_387185.1| conserved hypothetical protein [Gib...   160   2e-37
gi|19922976|ref|NP_612012.1| CG16940-PA [Drosophila melanogaster...   159   5e-37
gi|24654592|ref|NP_728490.1| CG16940-PC [Drosophila melanogaster...   159   5e-37
gi|41581219|emb|CAE47868.1| protein phosphatase ssd1 homologue, ...   157   2e-36
gi|32412420|ref|XP_326690.1| hypothetical protein [Neurospora cr...   154   1e-35
gi|14250916|emb|CAC39263.1| putative ribonuclease II-like protei...   152   4e-35
gi|49086508|ref|XP_405295.1| hypothetical protein AN1158.2 [Aspe...   152   4e-35
gi|46198862|ref|YP_004529.1| exoribonuclease II [Thermus thermop...   150   2e-34
gi|34877752|ref|XP_346070.1| similar to RIKEN cDNA 4930429A22 [R...   148   7e-34
gi|32964832|ref|NP_689596.2| hypothetical protein MGC42174 [Homo...   145   4e-33
gi|50555954|ref|XP_505385.1| hypothetical protein [Yarrowia lipo...   138   7e-31
gi|21753324|dbj|BAC04324.1| unnamed protein product [Homo sapiens]    137   2e-30
gi|38111550|gb|EAA57115.1| hypothetical protein MG08084.4 [Magna...   137   2e-30
gi|30248367|ref|NP_840437.1| rnr; exoribonuclease RNAse R (vacB ...   135   8e-30
gi|23104563|ref|ZP_00091027.1| COG0557: Exoribonuclease R [Azoto...   132   7e-29
gi|21428414|gb|AAM49867.1| LD08354p [Drosophila melanogaster]         132   7e-29
gi|48732174|ref|ZP_00265917.1| COG0557: Exoribonuclease R [Pseud...   130   3e-28
gi|46914862|emb|CAG21639.1| putative Exoribonuclease R [Photobac...   129   3e-28
gi|48769569|ref|ZP_00273914.1| COG0557: Exoribonuclease R [Ralst...   129   4e-28
gi|16120715|ref|NP_404028.1| ribonuclease R [Yersinia pestis] >g...   129   4e-28
gi|46443975|gb|EAL03253.1| hypothetical protein CaO19.11441 [Can...   128   7e-28
gi|46443810|gb|EAL03089.1| hypothetical protein CaO19.3959 [Cand...   128   7e-28
gi|7493807|pir||T30524 protein phosphatase Ssd1 homolog - yeast ...   128   1e-27
gi|19703943|ref|NP_603505.1| Exoribonuclease II [Fusobacterium n...   128   1e-27
gi|26991559|ref|NP_746984.1| ribonuclease R [Pseudomonas putida ...   128   1e-27
gi|15673187|ref|NP_267361.1| ribonuclease [Lactococcus lactis su...   127   2e-27
gi|22995402|ref|ZP_00039879.1| COG0557: Exoribonuclease R [Xylel...   127   2e-27
gi|46319203|ref|ZP_00219617.1| COG0557: Exoribonuclease R [Burkh...   127   2e-27
gi|15805382|ref|NP_294076.1| ribonuclease [Deinococcus radiodura...   127   2e-27
gi|15838581|ref|NP_299269.1| VacB protein [Xylella fastidiosa 9a...   126   4e-27
gi|17545947|ref|NP_519349.1| PROBABLE EXORIBONUCLEASE RNASE R (V...   125   5e-27
gi|23469911|ref|ZP_00125245.1| COG0557: Exoribonuclease R [Pseud...   125   6e-27
gi|46311973|ref|ZP_00212573.1| COG0557: Exoribonuclease R [Burkh...   125   6e-27
gi|28872049|ref|NP_794668.1| ribonuclease R [Pseudomonas syringa...   125   8e-27
gi|15794292|ref|NP_284114.1| putative ribonuclease [Neisseria me...   124   1e-26
gi|28210140|ref|NP_781084.1| exoribonuclease II [Clostridium tet...   124   1e-26
gi|731093|sp|P21499|RNR_ECOLI Ribonuclease R (RNase R) (VacB pro...   124   1e-26
gi|18310278|ref|NP_562212.1| ribonuclease R [Clostridium perfrin...   124   1e-26
gi|26251071|ref|NP_757111.1| Ribonuclease R [Escherichia coli CF...   124   1e-26
gi|49176467|ref|NP_418600.3| ribonuclease R; RNase R [Escherichi...   124   1e-26
gi|22997599|ref|ZP_00041828.1| COG0557: Exoribonuclease R [Xylel...   124   1e-26
gi|28198725|ref|NP_779039.1| truncated ribonuclease R [Xylella f...   124   1e-26
gi|28377650|ref|NP_784542.1| ribonuclease R [Lactobacillus plant...   124   1e-26
gi|27735249|sp|P30851|RNR_SHIFL Ribonuclease R (RNase R) (VacB p...   124   2e-26
gi|38704239|ref|NP_313182.2| hypothetical protein ECs5155 [Esche...   124   2e-26
gi|24115534|ref|NP_710044.1| putative enzyme [Shigella flexneri ...   124   2e-26
gi|15804768|ref|NP_290809.1| putative enzyme [Escherichia coli O...   124   2e-26
gi|15677073|ref|NP_274225.1| ribonuclease II family protein [Nei...   123   3e-26
gi|46113533|ref|ZP_00182992.2| COG0557: Exoribonuclease R [Exigu...   123   3e-26
gi|39996585|ref|NP_952536.1| ribonuclease R, putative [Geobacter...   122   5e-26
gi|30023166|ref|NP_834797.1| Exoribonuclease II [Bacillus cereus...   121   9e-26
gi|21397569|ref|NP_653554.1| RNB, RNB-like protein [Bacillus ant...   121   9e-26
gi|15894003|ref|NP_347352.1| FUSION ribonuclease and ribosomal p...   121   9e-26
gi|49481126|ref|YP_039117.1| ribonuclease R (RNase R) [Bacillus ...   121   9e-26
gi|15643485|ref|NP_228531.1| vacB protein [Thermotoga maritima M...   121   9e-26
gi|34764100|ref|ZP_00144977.1| Exoribonuclease II [Fusobacterium...   121   9e-26
gi|15600130|ref|NP_253624.1| exoribonuclease RNase R [Pseudomona...   121   9e-26
gi|15616115|ref|NP_244420.1| ribonuclease R; virulence-associate...   121   1e-25
gi|42784278|ref|NP_981525.1| ribonuclease R [Bacillus cereus ATC...   121   1e-25
gi|391901|dbj|BAA01777.1| ORF-2 [Shigella flexneri]                   120   2e-25
gi|47567335|ref|ZP_00238048.1| exoribonuclease, VacB/RNase II fa...   120   2e-25
gi|16801605|ref|NP_471873.1| similar to exoribonuclease RNase-R ...   120   2e-25
gi|16763187|ref|NP_458804.1| ribonuclease R (RNase R) [Salmonell...   120   3e-25
gi|49236282|ref|ZP_00330343.1| COG0557: Exoribonuclease R [Moore...   120   3e-25
gi|48867779|ref|ZP_00321221.1| COG0557: Exoribonuclease R [Haemo...   119   3e-25
gi|50086178|ref|YP_047688.1| exoribonuclease R [Acinetobacter sp...   119   3e-25
gi|15674608|ref|NP_268782.1| putative exoribonuclease R [Strepto...   119   3e-25
gi|50122543|ref|YP_051710.1| ribonuclease R [Erwinia carotovora ...   119   4e-25
gi|19745621|ref|NP_606757.1| putative exoribonuclease R [Strepto...   119   4e-25
gi|34498978|ref|NP_903193.1| probable ribonuclease R [Chromobact...   119   4e-25
gi|21230971|ref|NP_636888.1| RNase R [Xanthomonas campestris pv....   119   4e-25
gi|42522037|ref|NP_967417.1| ribonuclease R [Bdellovibrio bacter...   119   6e-25
gi|21242317|ref|NP_641899.1| RNase R [Xanthomonas axonopodis pv....   119   6e-25
gi|21909888|ref|NP_664156.1| putative exoribonuclease R [Strepto...   119   6e-25
gi|28896413|ref|NP_802763.1| putative exoribonuclease R [Strepto...   119   6e-25
gi|15642594|ref|NP_232227.1| ribonuclease R [Vibrio cholerae O1 ...   118   8e-25
gi|16804487|ref|NP_465972.1| similar to exoribonuclease RNase-R ...   118   1e-24
gi|25011590|ref|NP_735985.1| Unknown [Streptococcus agalactiae N...   118   1e-24
gi|22537625|ref|NP_688476.1| exoribonuclease, VacB/Rnb family [S...   118   1e-24
gi|16080414|ref|NP_391241.1| ribonuclease R [Bacillus subtilis s...   117   1e-24
gi|15603819|ref|NP_246893.1| VacB [Pasteurella multocida Pm70] >...   117   1e-24
gi|37528394|ref|NP_931739.1| ribonuclease R (RNase R) (VacB prot...   117   1e-24
gi|47096836|ref|ZP_00234417.1| ribonuclease R, putative [Listeri...   117   2e-24
gi|46129169|ref|ZP_00155776.2| COG0557: Exoribonuclease R [Haemo...   117   2e-24
gi|29468371|gb|AAO85525.1| Rrp44p-like protein [Trypanosoma cruzi]    116   3e-24
gi|46143701|ref|ZP_00134670.2| COG0557: Exoribonuclease R [Actin...   116   3e-24
gi|37681245|ref|NP_935854.1| exoribonuclease R [Vibrio vulnificu...   116   3e-24
gi|27364704|ref|NP_760232.1| Exoribonuclease R [Vibrio vulnificu...   116   4e-24
gi|15607021|ref|NP_214403.1| VacB protein (ribonuclease II famil...   116   4e-24
gi|24379988|ref|NP_721943.1| putative exoribonuclease R (RNASE R...   115   5e-24
gi|46908622|ref|YP_015011.1| ribonuclease R, putative [Listeria ...   115   5e-24
gi|48788678|ref|ZP_00284657.1| COG0557: Exoribonuclease R [Burkh...   115   6e-24
gi|28899581|ref|NP_799186.1| ribonuclease R [Vibrio parahaemolyt...   115   6e-24
gi|17646566|gb|AAL40978.1| Rnr-like protein [Methylococcus capsu...   115   8e-24
gi|20807463|ref|NP_622634.1| Exoribonucleases [Thermoanaerobacte...   115   8e-24
gi|48846584|ref|ZP_00300845.1| COG0557: Exoribonuclease R [Geoba...   114   2e-23
gi|50876795|emb|CAG36635.1| related to ribonuclease R [Desulfota...   114   2e-23
gi|47228013|emb|CAF97642.1| unnamed protein product [Tetraodon n...   114   2e-23
gi|15902922|ref|NP_358472.1| Exoribonuclease R [Streptococcus pn...   114   2e-23
gi|46133164|ref|ZP_00156716.2| COG0557: Exoribonuclease R [Haemo...   113   2e-23
gi|50590582|ref|ZP_00331949.1| COG0557: Exoribonuclease R [Strep...   113   2e-23
gi|47575409|ref|ZP_00245444.1| COG0557: Exoribonuclease R [Rubri...   113   3e-23
gi|29840007|ref|NP_829113.1| exoribonuclease, VacB/Rnb family [C...   113   3e-23
gi|15900852|ref|NP_345456.1| exoribonuclease, VacB/Rnb family [S...   112   4e-23
gi|33151871|ref|NP_873224.1| ribonuclease r, virulence associate...   112   5e-23
gi|46446682|ref|YP_008047.1| putative ribonuclease R [Parachlamy...   112   5e-23
gi|29654398|ref|NP_820090.1| ribonuclease R [Coxiella burnetii R...   112   5e-23
gi|42518802|ref|NP_964732.1| ribonuclease R [Lactobacillus johns...   111   9e-23
gi|26377813|dbj|BAB28503.2| unnamed protein product [Mus musculus]    111   1e-22
gi|15672924|ref|NP_267098.1| ribonuclease [Lactococcus lactis su...   110   2e-22
gi|29377102|ref|NP_816256.1| ribonuclease R [Enterococcus faecal...   109   4e-22
gi|23467938|ref|ZP_00123514.1| COG0557: Exoribonuclease R [Haemo...   109   5e-22
gi|46156115|ref|ZP_00133381.2| COG0557: Exoribonuclease R [Haemo...   109   5e-22
gi|17989010|ref|NP_541643.1| RIBONUCLEASE R [Brucella melitensis...   109   5e-22
gi|15605122|ref|NP_219907.1| Ribonuclease Family [Chlamydia trac...   108   6e-22
gi|48857230|ref|ZP_00311260.1| COG0557: Exoribonuclease R [Clost...   108   8e-22
gi|22958235|ref|ZP_00005911.1| COG0557: Exoribonuclease R [Rhodo...   108   8e-22
gi|16272801|ref|NP_439021.1| virulence-associated protein [Haemo...   108   1e-21
gi|15618415|ref|NP_224700.1| ribonuclease family [Chlamydophila ...   108   1e-21
gi|48861104|ref|ZP_00315009.1| COG0557: Exoribonuclease R [Micro...   107   1e-21
gi|27467483|ref|NP_764120.1| ribonuclease R [Staphylococcus epid...   107   1e-21
gi|23500349|ref|NP_699789.1| exoribonuclease, VacB/RNase II fami...   107   1e-21
gi|27380223|ref|NP_771752.1| exoribonuclease [Bradyrhizobium jap...   107   2e-21
gi|48865411|ref|ZP_00319271.1| COG0557: Exoribonuclease R [Oenoc...   106   3e-21
gi|13470989|ref|NP_102558.1| ribonuclease R [Mesorhizobium loti ...   106   4e-21
gi|23003758|ref|ZP_00047408.1| COG0557: Exoribonuclease R [Lacto...   106   4e-21
gi|23099883|ref|NP_693349.1| ribonulease R [Oceanobacillus iheye...   105   5e-21
gi|32475350|ref|NP_868344.1| ribonuclease R [Pirellula sp. 1] >g...   105   5e-21
gi|15835291|ref|NP_297050.1| exoribonuclease, VacB/Rnb family [C...   105   7e-21
gi|24375423|ref|NP_719466.1| ribonuclease R [Shewanella oneidens...   103   2e-20
gi|48869738|ref|ZP_00322481.1| COG0557: Exoribonuclease R [Pedio...   103   3e-20
gi|15888628|ref|NP_354309.1| AGR_C_2395p [Agrobacterium tumefaci...   103   3e-20
gi|33600960|ref|NP_888520.1| putative ribonuclease R [Bordetella...   102   4e-20
gi|33594397|ref|NP_882041.1| putative ribonuclease R [Bordetella...   102   4e-20
gi|33597116|ref|NP_884759.1| putative ribonuclease R [Bordetella...   102   4e-20
gi|39580659|emb|CAE61341.1| Hypothetical protein CBG05180 [Caeno...   102   6e-20
gi|6473411|dbj|BAA87129.1| Hypothetical protein [Schizosaccharom...   102   7e-20
gi|48848831|ref|ZP_00303076.1| COG0557: Exoribonuclease R [Novos...   101   1e-19
gi|45915559|ref|ZP_00197128.1| COG0557: Exoribonuclease R [Mesor...   101   1e-19
gi|23024105|ref|ZP_00063328.1| COG0557: Exoribonuclease R [Leuco...   101   1e-19
gi|19075419|ref|NP_587919.1| sts5p, target of the inhibitor stau...   101   1e-19
gi|28898664|ref|NP_798269.1| putative virulence-associated prote...   101   1e-19
gi|13357613|ref|NP_077887.1| virulence associated protein - Exor...   100   2e-19
gi|31544662|ref|NP_853240.1| VacB [Mycoplasma gallisepticum R] >...   100   2e-19
gi|50427627|ref|XP_462426.1| unnamed protein product [Debaryomyc...   100   2e-19
gi|34558170|ref|NP_907985.1| RIBONUCLEASE [Wolinella succinogene...   100   3e-19
gi|21282471|ref|NP_645559.1| ribonuclease R [Staphylococcus aure...   100   3e-19
gi|11359056|pir||T45283 growth polarity maintenance protein sts5...   100   4e-19
gi|39936188|ref|NP_948464.1| ribonuclease R [Rhodopseudomonas pa...   100   4e-19
gi|49483038|ref|YP_040262.1| putative ribonuclease R [Staphyloco...    99   5e-19
gi|16126692|ref|NP_421256.1| exoribonuclease, VacB and RNase II ...    99   6e-19
gi|50876577|emb|CAG36417.1| related to ribonuclease R [Desulfota...    99   8e-19
gi|48824476|ref|ZP_00285850.1| COG0557: Exoribonuclease R [Enter...    99   8e-19
gi|15923770|ref|NP_371304.1| conserved hypothetical protein [Sta...    98   1e-18
gi|15926457|ref|NP_373990.1| ribonuclease R [Staphylococcus aure...    98   1e-18
gi|23490681|gb|EAA22399.1| hypothetical protein [Plasmodium yoel...    97   2e-18
gi|45547405|ref|ZP_00187455.1| COG0557: Exoribonuclease R [Rubro...    97   2e-18
gi|24212740|ref|NP_710221.1| VacB protein [Leptospira interrogan...    96   4e-18
gi|45655949|ref|YP_000035.1| ribonuclease R [Leptospira interrog...    96   5e-18
gi|34861034|ref|XP_230961.2| similar to Peroxisomal proliferator...    95   9e-18
gi|21672806|ref|NP_660873.1| ribonuclease R [Buchnera aphidicola...    95   1e-17
gi|23016311|ref|ZP_00056068.1| COG0557: Exoribonuclease R [Magne...    93   3e-17
gi|23474058|ref|ZP_00129353.1| COG0557: Exoribonuclease R [Desul...    93   4e-17
gi|32266033|ref|NP_860065.1| conserved hypothetical protein [Hel...    91   1e-16
gi|46915527|emb|CAG22299.1| putative exoribonuclease II [Photoba...    91   2e-16
gi|50752335|ref|XP_422741.1| PREDICTED: similar to hypothetical ...    90   3e-16
gi|49475580|ref|YP_033621.1| Exoribonuclease, VacB and RNase II ...    89   5e-16
gi|15965052|ref|NP_385405.1| PUTATIVE EXORIBONUCLEASE II PROTEIN...    89   6e-16
gi|50511103|dbj|BAD32537.1| mKIAA1769 protein [Mus musculus]           89   8e-16
gi|12044956|ref|NP_072766.1| virulence-associated protein homolo...    88   1e-15
gi|46580871|ref|YP_011679.1| ribonuclease R [Desulfovibrio vulga...    88   1e-15
gi|29249201|gb|EAA40718.1| GLP_56_56502_53413 [Giardia lamblia A...    87   2e-15
gi|48894056|ref|ZP_00327254.1| COG0557: Exoribonuclease R [Trich...    87   3e-15
gi|7674486|sp|P54084|RNR_THIFE RIBONUCLEASE R (RNASE R) (VACB PR...    87   3e-15
gi|48766244|ref|ZP_00270794.1| COG0557: Exoribonuclease R [Rhodo...    87   3e-15
gi|6687039|emb|CAB64789.1| VacB protein [Burkholderia sp.]             87   3e-15
gi|49474248|ref|YP_032290.1| Exoribonuclease, VacB and RNase II ...    86   4e-15
gi|6320499|ref|NP_010579.1| Protein with a role in maintenance o...    86   5e-15
gi|15617156|ref|NP_240369.1| VacB protein; ribonuclease R [Buchn...    86   7e-15
gi|25108920|sp|P57628|RNR_BUCAI Ribonuclease R (RNase R) (VacB p...    86   7e-15
gi|15791991|ref|NP_281814.1| putative ribonuclease [Campylobacte...    85   9e-15
gi|50365025|ref|YP_053450.1| virulence associated protein, ribon...    85   1e-14
gi|47459100|ref|YP_015962.1| vacb-like ribonuclease II [Mycoplas...    83   4e-14
gi|15828822|ref|NP_326182.1| VACB-LIKE (Shigella flexneri) RIBON...    83   5e-14
gi|21672536|ref|NP_660603.1| exoribonuclease II [Buchnera aphidi...    82   8e-14
gi|14572619|emb|CAC15528.3| dJ697K14.6 (Novel protein, KIAA1769)...    80   2e-13
gi|30316116|sp|Q9BYK8|P285_HUMAN Peroxisomal proliferator-activa...    80   2e-13
gi|97389|pir||S23260 hypothetical protein 1 - Thiobacillus ferro...    80   2e-13
gi|21668026|gb|AAM74197.1| peroxisomal proliferator-activated re...    80   2e-13
gi|34335260|ref|NP_208384.2| PPAR-alpha interacting complex prot...    80   2e-13
gi|14133261|dbj|BAB21860.2| KIAA1769 protein [Homo sapiens]            80   2e-13
gi|15791376|ref|NP_281200.1| ribonuclease II family protein; Vac...    80   4e-13
gi|42561375|ref|NP_975826.1| Ribonulease R [Mycoplasma mycoides ...    79   7e-13
gi|46118712|ref|ZP_00175501.2| COG0557: Exoribonuclease R [Croco...    77   3e-12
gi|15645862|ref|NP_208040.1| virulence associated protein homolo...    77   3e-12
gi|19113103|ref|NP_596311.1| hypothetical protein; ribonuclease ...    77   3e-12
gi|50288849|ref|XP_446854.1| unnamed protein product [Candida gl...    77   3e-12
gi|13507982|ref|NP_109931.1| 3'-5' exoribonuclease, RNase R [Myc...    76   4e-12
gi|26553786|ref|NP_757720.1| 3'-5' exoribonuclease RNase R [Myco...    75   7e-12
gi|28900462|ref|NP_800117.1| exoribonuclease II [Vibrio parahaem...    74   2e-11
gi|507740|gb|AAA62192.1| VacB                                          74   2e-11
gi|37676316|ref|NP_936712.1| exoribonuclease II [Vibrio vulnific...    74   3e-11
gi|41017533|sp|Q7MEL4|RNB_VIBVY Exoribonuclease II (Ribonuclease...    74   3e-11
gi|5823274|gb|AAD53087.1| virulence-associated protein [Brucella...    74   3e-11
gi|27366602|ref|NP_762129.1| Exoribonuclease II [Vibrio vulnific...    73   4e-11
gi|50120891|ref|YP_050058.1| exoribonuclease II [Erwinia carotov...    73   5e-11
gi|17228735|ref|NP_485283.1| Zam protein [Nostoc sp. PCC 7120] >...    72   6e-11
gi|24112685|ref|NP_707195.1| RNase II, mRNA degradation [Shigell...    72   6e-11
gi|50305423|ref|XP_452671.1| unnamed protein product [Kluyveromy...    72   1e-10
gi|15801890|ref|NP_287910.1| RNase II, mRNA degradation [Escheri...    72   1e-10
gi|559438|emb|CAA48112.1| ribonuclease II [Escherichia coli] >gn...    72   1e-10
gi|16129247|ref|NP_415802.1| RNase II, mRNA degradation [Escheri...    72   1e-10
gi|15831113|ref|NP_309886.1| RNase II [Escherichia coli O157:H7]...    72   1e-10
gi|47228014|emb|CAF97643.1| unnamed protein product [Tetraodon n...    71   2e-10
gi|29832423|ref|NP_827057.1| putative ribonuclease [Streptomyces...    70   2e-10
gi|23006731|ref|ZP_00048917.1| COG0557: Exoribonuclease R [Magne...    70   2e-10
gi|15612234|ref|NP_223887.1| RIBONUCLEASE II FAMILY PROTEIN [Hel...    70   3e-10
gi|37526285|ref|NP_929629.1| Exoribonuclease II (ribonuclease II...    70   4e-10
gi|23126702|ref|ZP_00108591.1| COG0557: Exoribonuclease R [Nosto...    70   4e-10
gi|47209162|emb|CAF90337.1| unnamed protein product [Tetraodon n...    69   5e-10
gi|26247621|ref|NP_753661.1| Exoribonuclease II [Escherichia col...    69   7e-10
gi|16329873|ref|NP_440601.1| protein conferring resistance to ac...    68   1e-09
gi|16760178|ref|NP_455795.1| exoribonuclease II [Salmonella ente...    68   1e-09
gi|15616877|ref|NP_240090.1| exoribonuclease II [Buchnera aphidi...    68   2e-09
gi|15805061|ref|NP_293746.1| ribonuclease II family protein [Dei...    67   2e-09
gi|45184752|ref|NP_982470.1| AAL072Cp [Eremothecium gossypii] >g...    67   3e-09
gi|42567593|ref|NP_195845.2| ribonuclease II family protein [Ara...    67   3e-09
gi|16765046|ref|NP_460661.1| RNase II [Salmonella typhimurium LT...    67   3e-09
gi|21748526|dbj|BAC03400.1| FLJ00327 protein [Homo sapiens]            67   3e-09
gi|2500546|sp|Q46363|ZAM_SYNY3 Acetazolamide conferring resistan...    66   4e-09
gi|21673828|ref|NP_661893.1| ribonuclease II family protein [Chl...    66   6e-09
gi|33240419|ref|NP_875361.1| Exoribonuclease R/ribonuclease II [...    65   8e-09
gi|15601560|ref|NP_233191.1| exoribonuclease II [Vibrio cholerae...    65   8e-09
gi|25028688|ref|NP_738742.1| putative ribonuclease R [Corynebact...    65   8e-09
gi|17231942|ref|NP_488490.1| ribonuclease II [Nostoc sp. PCC 712...    65   8e-09
gi|46206114|ref|ZP_00047689.2| COG0557: Exoribonuclease R [Magne...    64   2e-08
gi|45512675|ref|ZP_00164241.1| COG0557: Exoribonuclease R [Synec...    64   2e-08
gi|45524645|ref|ZP_00175917.1| COG0557: Exoribonuclease R [Croco...    64   2e-08
gi|23613581|ref|NP_704602.1| hypothetical protein [Plasmodium fa...    63   5e-08
gi|42526879|ref|NP_971977.1| RNB-like family protein [Treponema ...    63   5e-08
gi|46199473|ref|YP_005140.1| putative ribonuclease [Thermus ther...    63   5e-08
gi|41326414|emb|CAF20576.1| PUTATIVE EXORIBONUCLEASE [Corynebact...    62   6e-08
gi|19553435|ref|NP_601437.1| exoribonucleases [Corynebacterium g...    62   6e-08
gi|45506147|ref|ZP_00158507.1| COG0557: Exoribonuclease R [Anaba...    62   8e-08
gi|50758833|ref|XP_417438.1| PREDICTED: similar to PPAR-alpha in...    62   1e-07
gi|48860867|ref|ZP_00314775.1| COG4776: Exoribonuclease II [Micr...    61   1e-07
gi|33863013|ref|NP_894573.1| probable ribonuclease II [Prochloro...    61   2e-07
gi|33152350|ref|NP_873703.1| ribonuclease II [Haemophilus ducrey...    59   5e-07
gi|16122464|ref|NP_405777.1| exoribonuclease II [Yersinia pestis...    59   5e-07
gi|27904743|ref|NP_777869.1| exoribonuclease II [Buchnera aphidi...    59   7e-07
gi|21325005|dbj|BAB99627.1| Exoribonucleases [Corynebacterium gl...    59   9e-07
gi|15021874|dbj|BAB62212.1| hypothetical protein [Macaca fascicu...    59   9e-07
gi|23467751|ref|ZP_00123330.1| COG4776: Exoribonuclease II [Haem...    58   1e-06
gi|33150886|gb|AAP97321.1| hypothetical protein [Homo sapiens]         58   2e-06
gi|46156162|ref|ZP_00133292.2| COG4776: Exoribonuclease II [Haem...    57   2e-06
gi|33865758|ref|NP_897317.1| probable ribonuclease II [Synechoco...    57   2e-06
gi|45520435|ref|ZP_00171966.1| COG0557: Exoribonuclease R [Methy...    57   3e-06
gi|15602046|ref|NP_245118.1| Rnb [Pasteurella multocida Pm70] >g...    57   4e-06
gi|34877562|ref|XP_237349.2| similar to RIKEN cDNA 4930429A22 [R...    56   5e-06
gi|50305043|ref|XP_452479.1| unnamed protein product [Kluyveromy...    56   6e-06
gi|16329795|ref|NP_440523.1| ribonuclease II [Synechocystis sp. ...    56   6e-06
gi|23480316|gb|EAA16907.1| rhoptry protein [Plasmodium yoelii yo...    56   6e-06
gi|37521185|ref|NP_924562.1| ribonuclease II [Gloeobacter violac...    56   6e-06
gi|48893235|ref|ZP_00326504.1| COG0557: Exoribonuclease R [Trich...    56   6e-06
gi|34908178|ref|NP_915436.1| ribonuclease II-like protein [Oryza...    55   1e-05
gi|23129239|ref|ZP_00111071.1| COG0557: Exoribonuclease R [Nosto...    55   1e-05
gi|11358769|pir||T48246 ribonuclease II-like protein - Arabidops...    54   2e-05
gi|2565138|gb|AAB81900.1| unknown [Lactococcus lactis]                 54   2e-05
gi|23612234|ref|NP_703814.1| ribonuclease, putative [Plasmodium ...    54   2e-05
gi|48850645|ref|ZP_00304887.1| COG0557: Exoribonuclease R [Novos...    54   3e-05
gi|22298194|ref|NP_681441.1| ribonuclease II [Thermosynechococcu...    53   4e-05
gi|6323943|ref|NP_014014.1| RNase, component of the mitochondria...    53   5e-05
gi|557724|gb|AAC49144.1| DSS-1                                         53   5e-05
gi|23478331|gb|EAA15449.1| RNB-like protein, putative [Plasmodiu...    52   9e-05
gi|13470330|ref|NP_101927.1| ribonuclease [Mesorhizobium loti MA...    51   2e-04
gi|14021100|dbj|BAB47713.1| ribonuclease [Mesorhizobium loti]          51   2e-04
gi|47573046|ref|ZP_00243086.1| COG0557: Exoribonuclease R [Rubri...    50   3e-04
gi|16273617|ref|NP_439875.1| exoribonuclease II [Haemophilus inf...    50   3e-04
gi|48867032|ref|ZP_00320670.1| COG4776: Exoribonuclease II [Haem...    50   3e-04
gi|21226646|ref|NP_632568.1| Exoribonuclease II [Methanosarcina ...    50   3e-04
gi|46133631|ref|ZP_00157495.2| COG4776: Exoribonuclease II [Haem...    50   4e-04
gi|41723866|ref|ZP_00150756.1| COG0557: Exoribonuclease R [Dechl...    49   6e-04
gi|48767650|ref|ZP_00272004.1| COG0557: Exoribonuclease R [Ralst...    48   0.001
gi|15639792|ref|NP_219242.1| exoribonuclease II (rnb) [Treponema...    48   0.002
gi|23475683|ref|ZP_00130965.1| COG0557: Exoribonuclease R [Desul...    47   0.003
gi|46447205|ref|YP_008570.1| putative ribonuclease R [Parachlamy...    47   0.003
gi|32034113|ref|ZP_00134345.1| COG4776: Exoribonuclease II [Acti...    47   0.003
gi|17547498|ref|NP_520900.1| HYPOTHETICAL PROTEIN RS00068 [Ralst...    47   0.004
gi|41689163|ref|ZP_00145698.1| COG0557: Exoribonuclease R [Psych...    46   0.006
gi|45526754|ref|ZP_00177957.1| COG0557: Exoribonuclease R [Croco...    45   0.011
gi|46321072|ref|ZP_00221452.1| COG0557: Exoribonuclease R [Burkh...    45   0.014
gi|33603369|ref|NP_890929.1| conserved hypothetical protein [Bor...    45   0.014
gi|33598429|ref|NP_886072.1| conserved hypothetical protein [Bor...    45   0.014
gi|45507703|ref|ZP_00160046.1| COG0557: Exoribonuclease R [Anaba...    45   0.014
gi|46228767|gb|EAK89637.1| ssd1p/F48E8.6-like RNAseII [Cryptospo...    45   0.014
gi|15795074|ref|NP_284896.1| hypothetical protein [Neisseria men...    44   0.018
gi|30249590|ref|NP_841660.1| Ribonuclease II domain [Nitrosomona...    44   0.018
gi|33593933|ref|NP_881577.1| conserved hypothetical protein [Bor...    44   0.018
gi|15676206|ref|NP_273338.1| ribonuclease II-related protein [Ne...    44   0.031
gi|46316001|ref|ZP_00216581.1| COG0557: Exoribonuclease R [Burkh...    42   0.069
gi|12311868|emb|CAC22684.1| hypothetical protein L2743.03 [Leish...    42   0.069
gi|33861425|ref|NP_892986.1| probable ribonuclease II [Prochloro...    42   0.069
gi|46140810|ref|ZP_00203755.1| COG0557: Exoribonuclease R [Dechl...    42   0.12
gi|50256234|gb|EAL18961.1| hypothetical protein CNBI2220 [Crypto...    42   0.12
gi|48781090|ref|ZP_00277744.1| COG0557: Exoribonuclease R [Burkh...    41   0.15
gi|476840|pir||A45734 hisC 5'-region hypothetical protein - Lact...    41   0.15
gi|37521017|ref|NP_924394.1| Zam protein homolog [Gloeobacter vi...    41   0.15
gi|18676690|dbj|BAB84997.1| FLJ00244 protein [Homo sapiens]            41   0.15
gi|42629077|ref|ZP_00154627.1| COG4776: Exoribonuclease II [Haem...    41   0.20
gi|46120957|ref|ZP_00201869.1| COG0557: Exoribonuclease R [Methy...    41   0.20
gi|34495547|ref|NP_899762.1| probable ribonuclease II [Chromobac...    40   0.26
gi|49135435|ref|XP_413288.1| hypothetical protein AN9151.2 [Aspe...    40   0.34
gi|45525800|ref|ZP_00177021.1| COG0557: Exoribonuclease R [Croco...    40   0.45
gi|7494873|pir||T15335 hypothetical protein B0336.4 - Caenorhabd...    39   0.77
gi|32423163|ref|XP_332019.1| MITOCHONDRIAL PROTEIN CYT-4 [Neuros...    39   0.77
gi|42519261|ref|NP_965191.1| aspartyl-tRNA synthetase [Lactobaci...    39   1.0
gi|29470183|gb|AAO74636.1| exoribonuclease DSS-1 [Trypanosoma br...    39   1.0
gi|23482040|gb|EAA18141.1| hypothetical protein [Plasmodium yoel...    39   1.0
gi|46436034|gb|EAK95404.1| hypothetical protein CaO19.3624 [Cand...    38   1.7
gi|46436090|gb|EAK95459.1| hypothetical protein CaO19.11107 [Can...    38   1.7
gi|21751020|dbj|BAC03887.1| unnamed protein product [Homo sapiens]     38   1.7
gi|39594255|emb|CAE70365.1| Hypothetical protein CBG16924 [Caeno...    37   2.2
gi|22299416|ref|NP_682663.1| protein conferring resistance to ac...    37   2.2
gi|46581609|ref|YP_012417.1| RNB-like family protein [Desulfovib...    37   2.9
gi|14272315|emb|CAC39623.1| bA555G22.1 (KIAA1008 protein) [Homo ...    37   2.9
gi|23509758|ref|NP_702425.1| hypothetical protein [Plasmodium fa...    37   2.9
gi|23482349|gb|EAA18356.1| hypothetical protein [Plasmodium yoel...    37   2.9
gi|23002864|ref|ZP_00046536.1| COG0173: Aspartyl-tRNA synthetase...    36   6.5
gi|46108738|ref|XP_381427.1| hypothetical protein FG01251.1 [Gib...    36   6.5
gi|49075072|ref|XP_401626.1| hypothetical protein UM04011.1 [Ust...    35   8.5


>gi|17538438|ref|NP_501835.1| mitotic control protein dis3 (116.7 kD)
            (4K869) [Caenorhabditis elegans]
 gi|2500548|sp|Q17632|RR44_CAEEL Probable exosome complex exonuclease
            RRP44 (Ribosomal RNA processing protein 44) (DIS3 protein
            homolog)
 gi|7495386|pir||T18925 hypothetical protein C04G2.6 - Caenorhabditis
            elegans
 gi|3873904|emb|CAA94677.1| Hypothetical protein C04G2.6
            [Caenorhabditis elegans]
          Length = 1029

 Score = 1977 bits (5123), Expect = 0.0
 Identities = 990/1029 (96%), Positives = 990/1029 (96%)
 Frame = +1

Query: 1    MDLNVKQSGIHSVALHTTYFQNRSGKVYKRAEERYLRNDLSCGLAQCGTCKDFGTNPLLK 180
            MDLNVKQSGIHSVALHTTYFQNRSGKVYKRAEERYLRNDLSCGLAQCGTCKDFGTNPLLK
Sbjct: 1    MDLNVKQSGIHSVALHTTYFQNRSGKVYKRAEERYLRNDLSCGLAQCGTCKDFGTNPLLK 60

Query: 181  IENPVRNAKVGRHALIVDSTSLIRFYDLFDSSLLRDLIVTQTVWEGVKAKAVPAYKKMNS 360
            IENPVRNAKVGRHALIVDSTSLIRFYDLFDSSLLRDLIVTQTVWEGVKAKAVPAYKKMNS
Sbjct: 61   IENPVRNAKVGRHALIVDSTSLIRFYDLFDSSLLRDLIVTQTVWEGVKAKAVPAYKKMNS 120

Query: 361  LCYEDAKDRFHVFMNEFHCETFSESSKFEDLSRGEELLLSTALYLKTHWQKHNVAPVVLV 540
            LCYEDAKDRFHVFMNEFHCETFSESSKFEDLSRGEELLLSTALYLKTHWQKHNVAPVVLV
Sbjct: 121  LCYEDAKDRFHVFMNEFHCETFSESSKFEDLSRGEELLLSTALYLKTHWQKHNVAPVVLV 180

Query: 541  FDEDSKKRMENHYQHVMYLKEYIQNLEDPGKQALLDQMAAYESSGNGNEKQIFDEYLSHD 720
            FDEDSKKRMENHYQHVMYLKEYIQNLEDPGKQALLDQMAAYESSGNGNEKQIFDEYLSHD
Sbjct: 181  FDEDSKKRMENHYQHVMYLKEYIQNLEDPGKQALLDQMAAYESSGNGNEKQIFDEYLSHD 240

Query: 721  RIMEGIASGTIKRGNFSVSRENYREATVIIDDQLTSWFITGNNCNRAVNGDTVAVQLLPE 900
            RIMEGIASGTIKRGNFSVSRENYREATVIIDDQLTSWFITGNNCNRAVNGDTVAVQLLPE
Sbjct: 241  RIMEGIASGTIKRGNFSVSRENYREATVIIDDQLTSWFITGNNCNRAVNGDTVAVQLLPE 300

Query: 901  DQWTAPEKKIRLRDVEEYVKTADDMGXXXXXXXXXXXXPKAKKSKKMTVSTAKVVGIIKR 1080
            DQWTAPEKKIRLRDVEEYVKTADDMG            PKAKKSKKMTVSTAKVVGIIKR
Sbjct: 301  DQWTAPEKKIRLRDVEEYVKTADDMGNEDEENDDENDEPKAKKSKKMTVSTAKVVGIIKR 360

Query: 1081 NWREYCGMLLPSTVKGARRHLFCPAERLIPRIRIETEQAETLSQQRIVVAIDHWPRDSKY 1260
            NWREYCGMLLPSTVKGARRHLFCPAERLIPRIRIETEQAETLSQQRIVVAIDHWPRDSKY
Sbjct: 361  NWREYCGMLLPSTVKGARRHLFCPAERLIPRIRIETEQAETLSQQRIVVAIDHWPRDSKY 420

Query: 1261 PLGHYVRSIGEMGSRETENEVLLLEHDIPHAPFSESVLDCLPREEWEPDLTENRGPLPRV 1440
            PLGHYVRSIGEMGSRETENEVLLLEHDIPHAPFSESVLDCLPREEWEPDLTENRGPLPRV
Sbjct: 421  PLGHYVRSIGEMGSRETENEVLLLEHDIPHAPFSESVLDCLPREEWEPDLTENRGPLPRV 480

Query: 1441 DLRDLTICSVDPLGCTDIDDALHCKQIGEDLFEVGVHIADVTHFVRPGTAIDDEAALRGT 1620
            DLRDLTICSVDPLGCTDIDDALHCKQIGEDLFEVGVHIADVTHFVRPGTAIDDEAALRGT
Sbjct: 481  DLRDLTICSVDPLGCTDIDDALHCKQIGEDLFEVGVHIADVTHFVRPGTAIDDEAALRGT 540

Query: 1621 TVYLCDRRIDMXXXXXXXXXXXXRGEEERYAFSCIWTMTSSADIQSVKYHKSLIKSKAAL 1800
            TVYLCDRRIDM            RGEEERYAFSCIWTMTSSADIQSVKYHKSLIKSKAAL
Sbjct: 541  TVYLCDRRIDMLPCLLSSNLCSLRGEEERYAFSCIWTMTSSADIQSVKYHKSLIKSKAAL 600

Query: 1801 TYEKAQEIIDDPKEQNDVALGLRGLMKLSKVLNARRTGNGALTLASSEVRFDMDWESRTP 1980
            TYEKAQEIIDDPKEQNDVALGLRGLMKLSKVLNARRTGNGALTLASSEVRFDMDWESRTP
Sbjct: 601  TYEKAQEIIDDPKEQNDVALGLRGLMKLSKVLNARRTGNGALTLASSEVRFDMDWESRTP 660

Query: 1981 KKVMEKQHLDTHSMVEEFMLLANISVAEKILEEYPDCALLRRHPVPLKESYKPLVEAARH 2160
            KKVMEKQHLDTHSMVEEFMLLANISVAEKILEEYPDCALLRRHPVPLKESYKPLVEAARH
Sbjct: 661  KKVMEKQHLDTHSMVEEFMLLANISVAEKILEEYPDCALLRRHPVPLKESYKPLVEAARH 720

Query: 2161 RGFEIIVESGKGLADSLNRCVDKKNPXXXXXXXXXXXXXXXQAVYFSAGKDGFSDIKLEE 2340
            RGFEIIVESGKGLADSLNRCVDKKNP               QAVYFSAGKDGFSDIKLEE
Sbjct: 721  RGFEIIVESGKGLADSLNRCVDKKNPMLNRLLRMLTTRCMTQAVYFSAGKDGFSDIKLEE 780

Query: 2341 KKFFVLKTLNLPYRSCLCDDTETSIHLSRGLNDYFLFKKEKLHMSVGVLFKLFDCLGTVP 2520
            KKFFVLKTLNLPYRSCLCDDTETSIHLSRGLNDYFLFKKEKLHMSVGVLFKLFDCLGTVP
Sbjct: 781  KKFFVLKTLNLPYRSCLCDDTETSIHLSRGLNDYFLFKKEKLHMSVGVLFKLFDCLGTVP 840

Query: 2521 VPQYQHFGLACAIYTHFTSPIRRYADVIVHRLLAAAIGADDIQSGLLNQARCTKICTNIN 2700
            VPQYQHFGLACAIYTHFTSPIRRYADVIVHRLLAAAIGADDIQSGLLNQARCTKICTNIN
Sbjct: 841  VPQYQHFGLACAIYTHFTSPIRRYADVIVHRLLAAAIGADDIQSGLLNQARCTKICTNIN 900

Query: 2701 YRHKQAQYAGRASVQLNVVRYFKGKVETCEGFVMGVRNNGIQVFVPKYGLESIIVLQTSA 2880
            YRHKQAQYAGRASVQLNVVRYFKGKVETCEGFVMGVRNNGIQVFVPKYGLESIIVLQTSA
Sbjct: 901  YRHKQAQYAGRASVQLNVVRYFKGKVETCEGFVMGVRNNGIQVFVPKYGLESIIVLQTSA 960

Query: 2881 ASGTTIDVEEMSVKVNGDVVIKELEPVTVRISVNEKNQQRPRVELQLIKPAIPGLSVDFD 3060
            ASGTTIDVEEMSVKVNGDVVIKELEPVTVRISVNEKNQQRPRVELQLIKPAIPGLSVDFD
Sbjct: 961  ASGTTIDVEEMSVKVNGDVVIKELEPVTVRISVNEKNQQRPRVELQLIKPAIPGLSVDFD 1020

Query: 3061 LSSSEGLGL 3087
            LSSSEGLGL
Sbjct: 1021 LSSSEGLGL 1029


>gi|39587884|emb|CAE67902.1| Hypothetical protein CBG13499
            [Caenorhabditis briggsae]
          Length = 1019

 Score = 1641 bits (4250), Expect = 0.0
 Identities = 834/1034 (80%), Positives = 896/1034 (85%), Gaps = 5/1034 (0%)
 Frame = +1

Query: 1    MDLNVKQSGIHSVALHTTYFQNRSGKVYKRAEERYLRNDLSCGLAQCGTCKDFGTNPLLK 180
            MDLNVKQSGIHS  LHT+YF+NRSGKVYKRA ERYLR DL CGLAQC  CKDFGTN LLK
Sbjct: 1    MDLNVKQSGIHSCVLHTSYFKNRSGKVYKRAAERYLRTDLPCGLAQCEDCKDFGTNSLLK 60

Query: 181  IENPVRNAKVGRHALIVDSTSLIRFYDLFDSSLLRDLIVTQTVWEGVKAKAVPAYKKMNS 360
             ENPV+N+KVGRH LIVDSTSLIRF+DLFDS LLR++IVTQTVWEGVKAKAVPAYKKMNS
Sbjct: 61   TENPVKNSKVGRHVLIVDSTSLIRFHDLFDSELLRNIIVTQTVWEGVKAKAVPAYKKMNS 120

Query: 361  LCYEDAKDRFHVFMNEFHCETFSESSKFEDLSRGEELLLSTALYLKTHWQKHNVAPVVLV 540
            LCYEDAKDRFHVFMNEFHCETFS+ +K+ED+SRGEELLL TA YL +HW+K NV PV++V
Sbjct: 121  LCYEDAKDRFHVFMNEFHCETFSDITKYEDVSRGEELLLCTANYLTSHWEKQNVTPVLMV 180

Query: 541  FDEDSKKRMENHYQHVMYLKEYIQNLEDPGKQALLDQMAAYESSGNGNEKQIFDEYLSHD 720
            FDE+SKKR+E HYQHV+YLKEYIQNLED GKQALLDQMAAYESS N NE+QIF+E+LSHD
Sbjct: 181  FDEESKKRLEKHYQHVLYLKEYIQNLEDSGKQALLDQMAAYESSANNNERQIFEEHLSHD 240

Query: 721  RIMEGIASGTIKRGNFSVSRENYREATVIIDDQLTSWFITGNNCNRAVNGDTVAVQLLPE 900
            +IM+GIA+GTIKRG FSVSRENYREA+VIIDDQL SWFITGN+CNR+VNGD VAVQLLPE
Sbjct: 241  KIMDGIANGTIKRGTFSVSRENYREASVIIDDQLNSWFITGNHCNRSVNGDVVAVQLLPE 300

Query: 901  DQWTAPEKKIRLRDVEEYVKTADDMGXXXXXXXXXXXXPKAKKSKKMTVSTAKVVGIIKR 1080
            DQWT PEKKIRLRDVEEYV  ADDMG            PKAKK+KK +V TAKVVGIIKR
Sbjct: 301  DQWTCPEKKIRLRDVEEYVNNADDMGKVEEDDEDE---PKAKKAKKNSVPTAKVVGIIKR 357

Query: 1081 NWREYCGMLLPSTVKGARRHLFCPAERLIPRIRIETEQAETLSQQRIVVAIDHWPRDSKY 1260
            NWR+YCGMLLPS+VKGARRHLFCPAERLIPRIRIETEQAE LSQQRIVVAIDHWPRDSKY
Sbjct: 358  NWRQYCGMLLPSSVKGARRHLFCPAERLIPRIRIETEQAEILSQQRIVVAIDHWPRDSKY 417

Query: 1261 PLGHYVRSIGEMGSRETENEVLLLEHDIPHAPFSESVLDCLPREEWEPDLTENRGPLPRV 1440
            PLGHYVRSIGEMGSRETENEVLLLEHDIPHAPFS+ V+DCLP+EEWEPDL +NRG LPRV
Sbjct: 418  PLGHYVRSIGEMGSRETENEVLLLEHDIPHAPFSDQVIDCLPKEEWEPDLNDNRGTLPRV 477

Query: 1441 DLRDLTICSVDPLGCTDIDDALHCKQIGEDLFEVGVHIADVTHFVRPGTAIDDEAALRGT 1620
            DLR LTICSVDP GCTDIDDALHCKQIG+DLFEVGVHIADVTHFVRP TAIDDEAALRGT
Sbjct: 478  DLRHLTICSVDPQGCTDIDDALHCKQIGDDLFEVGVHIADVTHFVRPNTAIDDEAALRGT 537

Query: 1621 TVYLCDRRIDMXXXXXXXXXXXXRGEEERYAFSCIWTMTSSADIQSVKYHKSLIKSKAAL 1800
            TVYLCDRRIDM            RG EERYAFS IWTMTS+ADIQSVKYHKSLIKSKAAL
Sbjct: 538  TVYLCDRRIDMLPCLLSSNLCSLRGGEERYAFSVIWTMTSNADIQSVKYHKSLIKSKAAL 597

Query: 1801 TYEKAQEIIDDPKEQNDVALGLRGLMKLSKVLNARRTGNGALTLASSEVRFDMDWESRTP 1980
            TYE+AQEIIDDPKEQ DVA GLR LMKLSKVLN++RT NGALTLASSEVRFDMDWESRTP
Sbjct: 598  TYERAQEIIDDPKEQGDVAQGLRELMKLSKVLNSKRTSNGALTLASSEVRFDMDWESRTP 657

Query: 1981 KKVMEKQHLDTHSMVEEFMLLANISVAEKILEEYPDCALLRRHPVPLKESYKPLVEAARH 2160
            KKVMEKQHLDTHSMVEEFMLLANI VA+KILEEYPDCALLRRHPVPLKESYKPL+EAARH
Sbjct: 658  KKVMEKQHLDTHSMVEEFMLLANIQVAKKILEEYPDCALLRRHPVPLKESYKPLIEAARH 717

Query: 2161 RGFEIIVESGKGLADSLNRCVDKKNPXXXXXXXXXXXXXXXQAVYFSAGKDGFSDIKLEE 2340
            RGFEIIVESGKGLADSLNRCVDKKNP               QAVYFSAGK     I ++
Sbjct: 718  RGFEIIVESGKGLADSLNRCVDKKNPMLNRLLRMLTTRCMTQAVYFSAGK----TINIQ- 772

Query: 2341 KKFFVLKTLNLPYRSCLCDDTETSIHL--SRGLNDYFLFKKEKLHMSVGVLFKLF---DC 2505
                +L  +++P  S   D  +  I    +R        K EK +    +L +
Sbjct: 773  ----ILPWVSVPTASGKNDIVKVKIGFRNTRKRLRRLKHKPEKSNNLANLLIRTLKNQKI 828

Query: 2506 LGTVPVPQYQHFGLACAIYTHFTSPIRRYADVIVHRLLAAAIGADDIQSGLLNQARCTKI 2685
            +GTVPVPQYQHFGLAC+IYTHFTSPIRRYADVIVHRLLAAAI ADDIQSGLL+QARCTK+
Sbjct: 829  IGTVPVPQYQHFGLACSIYTHFTSPIRRYADVIVHRLLAAAINADDIQSGLLSQARCTKV 888

Query: 2686 CTNINYRHKQAQYAGRASVQLNVVRYFKGKVETCEGFVMGVRNNGIQVFVPKYGLESIIV 2865
            C NINYRHKQAQYAGRASVQLNVVRYFKGKVETCEGFVMGVRNNGIQVFVPKYGLESIIV
Sbjct: 889  CGNINYRHKQAQYAGRASVQLNVVRYFKGKVETCEGFVMGVRNNGIQVFVPKYGLESIIV 948

Query: 2866 LQTSAASGTTIDVEEMSVKVNGDVVIKELEPVTVRISVNEKNQQRPRVELQLIKPAIPGL 3045
            LQ    SGTTIDVEEM+VKVNG+ VI+ELEPVTV+ISVNEKNQQRPR ELQLIKPAIPGL
Sbjct: 949  LQ--PGSGTTIDVEEMAVKVNGEAVIRELEPVTVKISVNEKNQQRPR-ELQLIKPAIPGL 1005

Query: 3046 SVDFDLSSSEGLGL 3087
            SVDFDLS+SEGLGL
Sbjct: 1006 SVDFDLSTSEGLGL 1019




[DB home][top]