Homology by BLASTX


BLASTX 2.2.4 [Aug-26-2002]
Query= C04F5_9
         (2331 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|25154290|ref|NP_504372.2| systemic RNA Interference Defective...  1509   0.0
gi|39583988|emb|CAE64078.1| Hypothetical protein CBG08682 [Caeno...   906   0.0
gi|7495369|pir||T33773 hypothetical protein C04F5.1 - Caenorhabd...   792   0.0
gi|39586638|emb|CAE69358.1| Hypothetical protein CBG15447 [Caeno...   171   9e-41
gi|48101601|ref|XP_395167.1| similar to hypothetical protein FLJ...   169   4e-40
gi|7506274|pir||T28870 hypothetical protein R04E5.6 - Caenorhabd...   167   8e-40
gi|17570717|ref|NP_509489.1| i-40 protein (87.0 kD) (XJ413) [Cae...   167   8e-40
gi|28493956|ref|XP_148505.2| similar to hypothetical protein FLJ...   164   1e-38
gi|8923171|ref|NP_060169.1| hypothetical protein FLJ20174 [Homo ...   160   1e-37
gi|46310239|gb|AAS87380.1| Msid2 [Rattus norvegicus]                  159   3e-37
gi|37574151|ref|NP_932151.1| RIKEN cDNA B830021E24 gene [Mus mus...   158   5e-37
gi|29835230|gb|AAH51101.1| BC023957 protein [Mus musculus]            157   1e-36
gi|26986551|ref|NP_758461.1| cDNA sequence BC023957 [Mus musculu...   157   1e-36
gi|37182008|gb|AAQ88807.1| multi-transmembrane domain immunoglob...   157   1e-36
gi|22761032|dbj|BAC11427.1| unnamed protein product [Homo sapiens]    157   1e-36
gi|13905162|gb|AAH06873.1| BC023957 protein [Mus musculus]            157   1e-36
gi|46310237|gb|AAS87379.1| Msid2 [Mus musculus]                       156   2e-36
gi|50729516|ref|XP_416544.1| PREDICTED: similar to hypothetical ...   155   5e-36
gi|47205001|emb|CAF95818.1| unnamed protein product [Tetraodon n...   151   6e-35
gi|34869150|ref|XP_221455.2| similar to hypothetical protein FLJ...   150   2e-34
gi|47224890|emb|CAG06460.1| unnamed protein product [Tetraodon n...   150   2e-34
gi|34863318|ref|XP_236205.2| hypothetical protein XP_236205 [Rat...   146   2e-33
gi|7705757|ref|NP_057080.1| CGI-40 protein [Homo sapiens] >gnl|B...   146   2e-33
gi|46310235|gb|AAS87378.1| Msid1 [Mus musculus]                       137   2e-30
gi|38080819|ref|XP_358844.1| similar to hypothetical protein FLJ...   135   4e-30
gi|26329887|dbj|BAC28682.1| unnamed protein product [Mus musculus]    119   3e-25
gi|22761643|dbj|BAC11641.1| unnamed protein product [Homo sapiens]     87   1e-15
gi|50782389|ref|XP_423383.1| PREDICTED: similar to hypothetical ...    45   0.008
gi|28392939|gb|AAO41905.1| putative sodium proton exchanger [Ara...    41   0.11
gi|17565418|ref|NP_507576.1| predicted CDS, i-40 protein like fa...    41   0.11
gi|6437550|gb|AAF08577.1| putative sodium proton exchanger [Arab...    39   0.56
gi|42563547|ref|NP_187288.2| sodium proton exchanger, putative (...    39   0.56
gi|48840092|ref|ZP_00297020.1| COG1287: Uncharacterized membrane...    39   0.73
gi|23612343|ref|NP_703923.1| hypothetical protein [Plasmodium fa...    39   0.73
gi|9628166|ref|NP_042752.1| CD2 homolog [African swine fever vir...    37   2.1
gi|42794746|gb|AAS45771.1| T-lymphocyte CD2 receptor-like protei...    37   2.1
gi|42794742|gb|AAS45768.1| T-lymphocyte CD2 receptor-like protei...    37   2.1
gi|13274366|gb|AAK17912.1| putative glycosyltransferase EcbJ [Pa...    36   3.6
gi|17534827|ref|NP_495749.1| nucleostemin (62.3 kD) (2I572) [Cae...    36   4.7
gi|48103180|ref|XP_395518.1| similar to CG6765-PA [Apis mellifera]     36   4.7
gi|47214918|emb|CAG04112.1| unnamed protein product [Tetraodon n...    35   6.2
gi|22202639|dbj|BAC07316.1| myosin heavy chain kinase C [Dictyos...    35   6.2
gi|48892313|ref|ZP_00325700.1| COG0392: Predicted integral membr...    35   6.2
gi|48870310|ref|ZP_00323035.1| COG0735: Fe2+/Zn2+ uptake regulat...    35   6.2
gi|3420749|gb|AAC31918.1| myosin heavy chain kinase C [Dictyoste...    35   6.2
gi|50422281|ref|XP_459703.1| unnamed protein product [Debaryomyc...    35   6.2
gi|27948863|gb|AAO25547.1| Na+/H+ antiporter [Hordeum brevisubul...    35   6.2
gi|39594355|emb|CAE71933.1| Hypothetical protein CBG18997 [Caeno...    35   8.0


>gi|25154290|ref|NP_504372.2| systemic RNA Interference Defective
            SID-1, putative transmembrane protein, systemic RNAi
            enabling (87.9 kD) (sid-1) [Caenorhabditis elegans]
 gi|41018137|sp|Q9GZC8|SID1_CAEEL Systemic RNA interference defective
            protein 1 precursor (Systemic RNAi enabling protein)
 gi|18699717|gb|AAL78657.1| systemic RNAi enabling protein SID-1
            [Caenorhabditis elegans]
 gi|20198758|gb|AAF98593.3| Systemic rna interference defective
            protein 1 [Caenorhabditis elegans]
          Length = 776

 Score = 1509 bits (3907), Expect = 0.0
 Identities = 760/776 (97%), Positives = 760/776 (97%)
 Frame = +1

Query: 1    MIRVYLIILMHLVIGLTQXXXXXXXXXXXXXXXXVLVFEISSKMKMIEKKLEANTVHVLR 180
            MIRVYLIILMHLVIGLTQ                VLVFEISSKMKMIEKKLEANTVHVLR
Sbjct: 1    MIRVYLIILMHLVIGLTQNNSTTPSPIITSSNSSVLVFEISSKMKMIEKKLEANTVHVLR 60

Query: 181  LELDQSFILDLTKVAAEIVDSSKYSKEDGVILEVTVSNGRDSFLLKLPTVYPNLKLYTDG 360
            LELDQSFILDLTKVAAEIVDSSKYSKEDGVILEVTVSNGRDSFLLKLPTVYPNLKLYTDG
Sbjct: 61   LELDQSFILDLTKVAAEIVDSSKYSKEDGVILEVTVSNGRDSFLLKLPTVYPNLKLYTDG 120

Query: 361  KLLNPLVEQDFGAHRKRHRIGDPHFHQNLIVTVQSRLNADIDYRLHVTHLDRAQYDFLKF 540
            KLLNPLVEQDFGAHRKRHRIGDPHFHQNLIVTVQSRLNADIDYRLHVTHLDRAQYDFLKF
Sbjct: 121  KLLNPLVEQDFGAHRKRHRIGDPHFHQNLIVTVQSRLNADIDYRLHVTHLDRAQYDFLKF 180

Query: 541  KTGQTTKTLSNQKLTFVKPIGFFLNCSEQNISQFHVTLYSEDDICANLITVPANESIYDR 720
            KTGQTTKTLSNQKLTFVKPIGFFLNCSEQNISQFHVTLYSEDDICANLITVPANESIYDR
Sbjct: 181  KTGQTTKTLSNQKLTFVKPIGFFLNCSEQNISQFHVTLYSEDDICANLITVPANESIYDR 240

Query: 721  SVISDKTHNRRVLSFTKRADIFFTETEISMFKSFRIFVFIAPDDSGCSTNTSRKSFNEKK 900
            SVISDKTHNRRVLSFTKRADIFFTETEISMFKSFRIFVFIAPDDSGCSTNTSRKSFNEKK
Sbjct: 241  SVISDKTHNRRVLSFTKRADIFFTETEISMFKSFRIFVFIAPDDSGCSTNTSRKSFNEKK 300

Query: 901  KISFEFKKLENQSYAVPTALMMIFLTTPCLLFLPIVINIIKNSRKLAPSQSNLISFSPVP 1080
            KISFEFKKLENQSYAVPTALMMIFLTTPCLLFLPIVINIIKNSRKLAPSQSNLISFSPVP
Sbjct: 301  KISFEFKKLENQSYAVPTALMMIFLTTPCLLFLPIVINIIKNSRKLAPSQSNLISFSPVP 360

Query: 1081 SEQRDMDLSHDEQQNTSSELENNGEIPAAENQIVEEITAENQETSVEEGNREIQVKIPLK 1260
            SEQRDMDLSHDEQQNTSSELENNGEIPAAENQIVEEITAENQETSVEEGNREIQVKIPLK
Sbjct: 361  SEQRDMDLSHDEQQNTSSELENNGEIPAAENQIVEEITAENQETSVEEGNREIQVKIPLK 420

Query: 1261 QDSLSLHGQMLQYPVAIILPVLMHTAIEFHKWTTSTMANRDEMCFHNHACARPLGELRAW 1440
            QDSLSLHGQMLQYPVAIILPVLMHTAIEFHKWTTSTMANRDEMCFHNHACARPLGELRAW
Sbjct: 421  QDSLSLHGQMLQYPVAIILPVLMHTAIEFHKWTTSTMANRDEMCFHNHACARPLGELRAW 480

Query: 1441 NNIITNIGYTLYGAIFIVLSICRRGRHEYSHVFGTYECTLLDVTIGVFMVLQSIASATYH 1620
            NNIITNIGYTLYGAIFIVLSICRRGRHEYSHVFGTYECTLLDVTIGVFMVLQSIASATYH
Sbjct: 481  NNIITNIGYTLYGAIFIVLSICRRGRHEYSHVFGTYECTLLDVTIGVFMVLQSIASATYH 540

Query: 1621 ICPSDVAFQFDTPCIQVICGLLMVRQWFVRHESPSPAYTNILLVGVVSLNFLISAFSKTS 1800
            ICPSDVAFQFDTPCIQVICGLLMVRQWFVRHESPSPAYTNILLVGVVSLNFLISAFSKTS
Sbjct: 541  ICPSDVAFQFDTPCIQVICGLLMVRQWFVRHESPSPAYTNILLVGVVSLNFLISAFSKTS 600

Query: 1801 YVRFIIAVIHVIVVGSICLAKERSLGSEKLKTRFFIMAFSMGNFAAIVMYLTLSAFHLNQ 1980
            YVRFIIAVIHVIVVGSICLAKERSLGSEKLKTRFFIMAFSMGNFAAIVMYLTLSAFHLNQ
Sbjct: 601  YVRFIIAVIHVIVVGSICLAKERSLGSEKLKTRFFIMAFSMGNFAAIVMYLTLSAFHLNQ 660

Query: 1981 IATYCFIINCIMYLMYYGCMKVLHSERITSKAKLCGALSLLAWAVAGFFFFQDDTDWTRS 2160
            IATYCFIINCIMYLMYYGCMKVLHSERITSKAKLCGALSLLAWAVAGFFFFQDDTDWTRS
Sbjct: 661  IATYCFIINCIMYLMYYGCMKVLHSERITSKAKLCGALSLLAWAVAGFFFFQDDTDWTRS 720

Query: 2161 AAASRALNKPCLLLGFFGSHDLWHIFGALAGLFTFIFVSFVDDDLINTRKTSINIF 2328
            AAASRALNKPCLLLGFFGSHDLWHIFGALAGLFTFIFVSFVDDDLINTRKTSINIF
Sbjct: 721  AAASRALNKPCLLLGFFGSHDLWHIFGALAGLFTFIFVSFVDDDLINTRKTSINIF 776


>gi|39583988|emb|CAE64078.1| Hypothetical protein CBG08682
            [Caenorhabditis briggsae]
          Length = 747

 Score =  906 bits (2342), Expect = 0.0
 Identities = 454/745 (60%), Positives = 578/745 (76%), Gaps = 3/745 (0%)
 Frame = +1

Query: 103  VLVFEISSKMKMIEKKLEANTVHVLRLELDQSFILDLTKVAAEIVDSSKYSKEDGVILEV 282
            + V E  ++ + I   L ANTVHV  L+LD++FILDLT+++A++ + + + KE   ILEV
Sbjct: 32   ISVREFPARRRQINDTLVANTVHVYYLKLDETFILDLTRISADVSEPALFRKEVDTILEV 91

Query: 283  TVSNGRDSFLLKLPTVYPNLKLYTDGKLLNPLVEQDFGAHRKRHRIGDPH--FHQNLIVT 456
            TVSNGRD+F+LKLP +YP+L LY+ GKLLNPL ++DFG  R +  I   +    QNL++T
Sbjct: 92   TVSNGRDNFILKLPMIYPDLTLYSYGKLLNPLRKEDFGPKRSKKNIPSENSTLSQNLVIT 151

Query: 457  VQSRLNADIDYRLHVTHLDRAQYDFLKFKTGQTTKTLSNQKLTFVKPIGFFLNCSEQNIS 636
            VQSRL  DIDY+LH+T LDR+QY+ L FK GQ+TKTL+NQKLTFVKPIGFFL+  EQ +
Sbjct: 152  VQSRLRVDIDYQLHLTRLDRSQYN-LSFKEGQSTKTLNNQKLTFVKPIGFFLDTEEQIVK 210

Query: 637  QFHVTLYSEDDICANLITVPANESIYDRSVISDKTHNRRVLSFTKRADIFFTETEISMFK 816
             FH+TL S DDICAN+IT PANESIY+R V SD+  NRRVL+FT+RADIFF+ETEI +FK
Sbjct: 211  SFHITLTSADDICANVITAPANESIYERPVDSDRADNRRVLTFTRRADIFFSETEIQLFK 270

Query: 817  SFRIFVFIAPDDSGCSTNTSRKSFNEKKKISFEFKKLENQSYAVPTALMMIFLTTPCLLF 996
            +FRIFVFI+P ++ CS NTSRK++NE KKI+F+F +LE  SY VPT  M++F  +PCL+F
Sbjct: 271  TFRIFVFISPVNAPCSGNTSRKNYNEIKKITFDFTRLEPNSYFVPTLAMLVFFASPCLIF 330

Query: 997  L-PIVINIIKNSRKLAPSQSNLISFSPVPSEQRDMDLSHDEQQNTSSELENNGEIPAAEN 1173
            +  + +N+I+N   L    ++LISF            S D+  NTS+  ENN     A N
Sbjct: 331  IASLTVNVIRNRSDLV---ADLISF------------SSDQSANTSAIAENN----MAHN 371

Query: 1174 QIVEEITAENQETSVEEGNREIQVKIPLKQDSLSLHGQMLQYPVAIILPVLMHTAIEFHK 1353
            +I   +  E +   V+E        IP+KQDSLSLHGQM +YPVA+ILPVLMHT +EFH
Sbjct: 372  EIA--VIPEEENLQVQEIE-----PIPIKQDSLSLHGQMFKYPVALILPVLMHTGVEFHN 424

Query: 1354 WTTSTMANRDEMCFHNHACARPLGELRAWNNIITNIGYTLYGAIFIVLSICRRGRHEYSH 1533
            +TTSTMANRDEMCFHN+ACA+PLGELR+WNN+I+NIGY +YG +FI++++CRR RH +S
Sbjct: 425  FTTSTMANRDEMCFHNNACAKPLGELRSWNNMISNIGYAIYGLVFIMVTMCRRWRH-HSP 483

Query: 1534 VFGTYECTLLDVTIGVFMVLQSIASATYHICPSDVAFQFDTPCIQVICGLLMVRQWFVRH 1713
            + GTYECTLLD+TIG+FM+LQ+IASATYHICPSD+AFQFDTPCIQVICGLL++RQW VR
Sbjct: 484  LVGTYECTLLDITIGLFMILQAIASATYHICPSDIAFQFDTPCIQVICGLLIIRQWLVRQ 543

Query: 1714 ESPSPAYTNILLVGVVSLNFLISAFSKTSYVRFIIAVIHVIVVGSICLAKERSLGSEKLK 1893
            ESPSPAYTNILL  VVSLNFLISA SK S +R++IA+IH  VV ++CLAK ++L S+++
Sbjct: 544  ESPSPAYTNILLFCVVSLNFLISACSKASGIRYLIAIIHFGVVATVCLAKRKTLRSKQV- 602

Query: 1894 TRFFIMAFSMGNFAAIVMYLTLSAFHLNQIATYCFIINCIMYLMYYGCMKVLHSERITSK 2073
             + F+  F++ NF AI +Y+T S  HLNQI+TYCFI+NCI+YL YY  MK    E I  K
Sbjct: 603  YKVFVGTFAIFNFFAITIYVTSSYIHLNQISTYCFILNCILYLTYYALMKFASRESIELK 662

Query: 2074 AKLCGALSLLAWAVAGFFFFQDDTDWTRSAAASRALNKPCLLLGFFGSHDLWHIFGALAG 2253
            AK+CG  ++  W +AGFFFFQDDTDWTR+AA SRALN PCLLL FFGSHDLWH+FGA+AG
Sbjct: 663  AKVCGVSAIFGWLIAGFFFFQDDTDWTRTAAMSRALNTPCLLLDFFGSHDLWHMFGAIAG 722

Query: 2254 LFTFIFVSFVDDDLINTRKTSINIF 2328
            LFTF+FVSFVDDDLINT K+SIN++
Sbjct: 723  LFTFLFVSFVDDDLINTPKSSINMY 747


>gi|7495369|pir||T33773 hypothetical protein C04F5.1 - Caenorhabditis
            elegans
          Length = 647

 Score =  792 bits (2046), Expect = 0.0
 Identities = 406/423 (95%), Positives = 407/423 (95%)
 Frame = +1

Query: 1    MIRVYLIILMHLVIGLTQXXXXXXXXXXXXXXXXVLVFEISSKMKMIEKKLEANTVHVLR 180
            MIRVYLIILMHLVIGLTQ                VLVFEISSKMKMIEKKLEANTVHVLR
Sbjct: 1    MIRVYLIILMHLVIGLTQNNSTTPSPIITSSNSSVLVFEISSKMKMIEKKLEANTVHVLR 60

Query: 181  LELDQSFILDLTKVAAEIVDSSKYSKEDGVILEVTVSNGRDSFLLKLPTVYPNLKLYTDG 360
            LELDQSFILDLTKVAAEIVDSSKYSKEDGVILEVTVSNGRDSFLLKLPTVYPNLKLYTDG
Sbjct: 61   LELDQSFILDLTKVAAEIVDSSKYSKEDGVILEVTVSNGRDSFLLKLPTVYPNLKLYTDG 120

Query: 361  KLLNPLVEQDFGAHRKRHRIGDPHFHQNLIVTVQSRLNADIDYRLHVTHLDRAQYDFLKF 540
            KLLNPLVEQDFGAHRKRHRIGDPHFHQNLIVTVQSRLNADIDYRLHVTHLDRAQYDFLKF
Sbjct: 121  KLLNPLVEQDFGAHRKRHRIGDPHFHQNLIVTVQSRLNADIDYRLHVTHLDRAQYDFLKF 180

Query: 541  KTGQTTKTLSNQKLTFVKPIGFFLNCSEQNISQFHVTLYSEDDICANLITVPANESIYDR 720
            KTGQTTKTLSNQKLTFVKPIGFFLNCSEQNISQFHVTLYSEDDICANLITVPANESIYDR
Sbjct: 181  KTGQTTKTLSNQKLTFVKPIGFFLNCSEQNISQFHVTLYSEDDICANLITVPANESIYDR 240

Query: 721  SVISDKTHNRRVLSFTKRADIFFTETEISMFKSFRIFVFIAPDDSGCSTNTSRKSFNEKK 900
            SVISDKTHNRRVLSFTKRADIFFTETEISMFKSFRIFVFIAPDDSGCSTNTSRKSFNEKK
Sbjct: 241  SVISDKTHNRRVLSFTKRADIFFTETEISMFKSFRIFVFIAPDDSGCSTNTSRKSFNEKK 300

Query: 901  KISFEFKKLENQSYAVPTALMMIFLTTPCLLFLPIVINIIKNSRKLAPSQSNLISFSPVP 1080
            KISFEFKKLENQSYAVPTALMMIFLTTPCLLFLPIVINIIKNSRKLAPSQSNLISFSPVP
Sbjct: 301  KISFEFKKLENQSYAVPTALMMIFLTTPCLLFLPIVINIIKNSRKLAPSQSNLISFSPVP 360

Query: 1081 SEQRDMDLSHDEQQNTSSELENNGEIPAAENQIVEEITAENQETSVEEGNREIQVKIPLK 1260
            SEQRDMDLSHDEQQNTSSELENNGEIPAAENQIVEEITAENQETSVEEGNREIQVKIPLK
Sbjct: 361  SEQRDMDLSHDEQQNTSSELENNGEIPAAENQIVEEITAENQETSVEEGNREIQVKIPLK 420

Query: 1261 QDS 1269
            QD+
Sbjct: 421  QDT 423



 Score =  456 bits (1174), Expect = e-127
 Identities = 226/226 (100%), Positives = 226/226 (100%)
 Frame = +1

Query: 1651 DTPCIQVICGLLMVRQWFVRHESPSPAYTNILLVGVVSLNFLISAFSKTSYVRFIIAVIH 1830
            DTPCIQVICGLLMVRQWFVRHESPSPAYTNILLVGVVSLNFLISAFSKTSYVRFIIAVIH
Sbjct: 422  DTPCIQVICGLLMVRQWFVRHESPSPAYTNILLVGVVSLNFLISAFSKTSYVRFIIAVIH 481

Query: 1831 VIVVGSICLAKERSLGSEKLKTRFFIMAFSMGNFAAIVMYLTLSAFHLNQIATYCFIINC 2010
            VIVVGSICLAKERSLGSEKLKTRFFIMAFSMGNFAAIVMYLTLSAFHLNQIATYCFIINC
Sbjct: 482  VIVVGSICLAKERSLGSEKLKTRFFIMAFSMGNFAAIVMYLTLSAFHLNQIATYCFIINC 541

Query: 2011 IMYLMYYGCMKVLHSERITSKAKLCGALSLLAWAVAGFFFFQDDTDWTRSAAASRALNKP 2190
            IMYLMYYGCMKVLHSERITSKAKLCGALSLLAWAVAGFFFFQDDTDWTRSAAASRALNKP
Sbjct: 542  IMYLMYYGCMKVLHSERITSKAKLCGALSLLAWAVAGFFFFQDDTDWTRSAAASRALNKP 601

Query: 2191 CLLLGFFGSHDLWHIFGALAGLFTFIFVSFVDDDLINTRKTSINIF 2328
            CLLLGFFGSHDLWHIFGALAGLFTFIFVSFVDDDLINTRKTSINIF
Sbjct: 602  CLLLGFFGSHDLWHIFGALAGLFTFIFVSFVDDDLINTRKTSINIF 647




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