Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= C04F5_9
(2331 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|25154290|ref|NP_504372.2| systemic RNA Interference Defective... 1509 0.0
gi|39583988|emb|CAE64078.1| Hypothetical protein CBG08682 [Caeno... 906 0.0
gi|7495369|pir||T33773 hypothetical protein C04F5.1 - Caenorhabd... 792 0.0
gi|39586638|emb|CAE69358.1| Hypothetical protein CBG15447 [Caeno... 171 9e-41
gi|48101601|ref|XP_395167.1| similar to hypothetical protein FLJ... 169 4e-40
gi|7506274|pir||T28870 hypothetical protein R04E5.6 - Caenorhabd... 167 8e-40
gi|17570717|ref|NP_509489.1| i-40 protein (87.0 kD) (XJ413) [Cae... 167 8e-40
gi|28493956|ref|XP_148505.2| similar to hypothetical protein FLJ... 164 1e-38
gi|8923171|ref|NP_060169.1| hypothetical protein FLJ20174 [Homo ... 160 1e-37
gi|46310239|gb|AAS87380.1| Msid2 [Rattus norvegicus] 159 3e-37
gi|37574151|ref|NP_932151.1| RIKEN cDNA B830021E24 gene [Mus mus... 158 5e-37
gi|29835230|gb|AAH51101.1| BC023957 protein [Mus musculus] 157 1e-36
gi|26986551|ref|NP_758461.1| cDNA sequence BC023957 [Mus musculu... 157 1e-36
gi|37182008|gb|AAQ88807.1| multi-transmembrane domain immunoglob... 157 1e-36
gi|22761032|dbj|BAC11427.1| unnamed protein product [Homo sapiens] 157 1e-36
gi|13905162|gb|AAH06873.1| BC023957 protein [Mus musculus] 157 1e-36
gi|46310237|gb|AAS87379.1| Msid2 [Mus musculus] 156 2e-36
gi|50729516|ref|XP_416544.1| PREDICTED: similar to hypothetical ... 155 5e-36
gi|47205001|emb|CAF95818.1| unnamed protein product [Tetraodon n... 151 6e-35
gi|34869150|ref|XP_221455.2| similar to hypothetical protein FLJ... 150 2e-34
gi|47224890|emb|CAG06460.1| unnamed protein product [Tetraodon n... 150 2e-34
gi|34863318|ref|XP_236205.2| hypothetical protein XP_236205 [Rat... 146 2e-33
gi|7705757|ref|NP_057080.1| CGI-40 protein [Homo sapiens] >gnl|B... 146 2e-33
gi|46310235|gb|AAS87378.1| Msid1 [Mus musculus] 137 2e-30
gi|38080819|ref|XP_358844.1| similar to hypothetical protein FLJ... 135 4e-30
gi|26329887|dbj|BAC28682.1| unnamed protein product [Mus musculus] 119 3e-25
gi|22761643|dbj|BAC11641.1| unnamed protein product [Homo sapiens] 87 1e-15
gi|50782389|ref|XP_423383.1| PREDICTED: similar to hypothetical ... 45 0.008
gi|28392939|gb|AAO41905.1| putative sodium proton exchanger [Ara... 41 0.11
gi|17565418|ref|NP_507576.1| predicted CDS, i-40 protein like fa... 41 0.11
gi|6437550|gb|AAF08577.1| putative sodium proton exchanger [Arab... 39 0.56
gi|42563547|ref|NP_187288.2| sodium proton exchanger, putative (... 39 0.56
gi|48840092|ref|ZP_00297020.1| COG1287: Uncharacterized membrane... 39 0.73
gi|23612343|ref|NP_703923.1| hypothetical protein [Plasmodium fa... 39 0.73
gi|9628166|ref|NP_042752.1| CD2 homolog [African swine fever vir... 37 2.1
gi|42794746|gb|AAS45771.1| T-lymphocyte CD2 receptor-like protei... 37 2.1
gi|42794742|gb|AAS45768.1| T-lymphocyte CD2 receptor-like protei... 37 2.1
gi|13274366|gb|AAK17912.1| putative glycosyltransferase EcbJ [Pa... 36 3.6
gi|17534827|ref|NP_495749.1| nucleostemin (62.3 kD) (2I572) [Cae... 36 4.7
gi|48103180|ref|XP_395518.1| similar to CG6765-PA [Apis mellifera] 36 4.7
gi|47214918|emb|CAG04112.1| unnamed protein product [Tetraodon n... 35 6.2
gi|22202639|dbj|BAC07316.1| myosin heavy chain kinase C [Dictyos... 35 6.2
gi|48892313|ref|ZP_00325700.1| COG0392: Predicted integral membr... 35 6.2
gi|48870310|ref|ZP_00323035.1| COG0735: Fe2+/Zn2+ uptake regulat... 35 6.2
gi|3420749|gb|AAC31918.1| myosin heavy chain kinase C [Dictyoste... 35 6.2
gi|50422281|ref|XP_459703.1| unnamed protein product [Debaryomyc... 35 6.2
gi|27948863|gb|AAO25547.1| Na+/H+ antiporter [Hordeum brevisubul... 35 6.2
gi|39594355|emb|CAE71933.1| Hypothetical protein CBG18997 [Caeno... 35 8.0
>gi|25154290|ref|NP_504372.2| systemic RNA Interference Defective
SID-1, putative transmembrane protein, systemic RNAi
enabling (87.9 kD) (sid-1) [Caenorhabditis elegans]
gi|41018137|sp|Q9GZC8|SID1_CAEEL Systemic RNA interference defective
protein 1 precursor (Systemic RNAi enabling protein)
gi|18699717|gb|AAL78657.1| systemic RNAi enabling protein SID-1
[Caenorhabditis elegans]
gi|20198758|gb|AAF98593.3| Systemic rna interference defective
protein 1 [Caenorhabditis elegans]
Length = 776
Score = 1509 bits (3907), Expect = 0.0
Identities = 760/776 (97%), Positives = 760/776 (97%)
Frame = +1
Query: 1 MIRVYLIILMHLVIGLTQXXXXXXXXXXXXXXXXVLVFEISSKMKMIEKKLEANTVHVLR 180
MIRVYLIILMHLVIGLTQ VLVFEISSKMKMIEKKLEANTVHVLR
Sbjct: 1 MIRVYLIILMHLVIGLTQNNSTTPSPIITSSNSSVLVFEISSKMKMIEKKLEANTVHVLR 60
Query: 181 LELDQSFILDLTKVAAEIVDSSKYSKEDGVILEVTVSNGRDSFLLKLPTVYPNLKLYTDG 360
LELDQSFILDLTKVAAEIVDSSKYSKEDGVILEVTVSNGRDSFLLKLPTVYPNLKLYTDG
Sbjct: 61 LELDQSFILDLTKVAAEIVDSSKYSKEDGVILEVTVSNGRDSFLLKLPTVYPNLKLYTDG 120
Query: 361 KLLNPLVEQDFGAHRKRHRIGDPHFHQNLIVTVQSRLNADIDYRLHVTHLDRAQYDFLKF 540
KLLNPLVEQDFGAHRKRHRIGDPHFHQNLIVTVQSRLNADIDYRLHVTHLDRAQYDFLKF
Sbjct: 121 KLLNPLVEQDFGAHRKRHRIGDPHFHQNLIVTVQSRLNADIDYRLHVTHLDRAQYDFLKF 180
Query: 541 KTGQTTKTLSNQKLTFVKPIGFFLNCSEQNISQFHVTLYSEDDICANLITVPANESIYDR 720
KTGQTTKTLSNQKLTFVKPIGFFLNCSEQNISQFHVTLYSEDDICANLITVPANESIYDR
Sbjct: 181 KTGQTTKTLSNQKLTFVKPIGFFLNCSEQNISQFHVTLYSEDDICANLITVPANESIYDR 240
Query: 721 SVISDKTHNRRVLSFTKRADIFFTETEISMFKSFRIFVFIAPDDSGCSTNTSRKSFNEKK 900
SVISDKTHNRRVLSFTKRADIFFTETEISMFKSFRIFVFIAPDDSGCSTNTSRKSFNEKK
Sbjct: 241 SVISDKTHNRRVLSFTKRADIFFTETEISMFKSFRIFVFIAPDDSGCSTNTSRKSFNEKK 300
Query: 901 KISFEFKKLENQSYAVPTALMMIFLTTPCLLFLPIVINIIKNSRKLAPSQSNLISFSPVP 1080
KISFEFKKLENQSYAVPTALMMIFLTTPCLLFLPIVINIIKNSRKLAPSQSNLISFSPVP
Sbjct: 301 KISFEFKKLENQSYAVPTALMMIFLTTPCLLFLPIVINIIKNSRKLAPSQSNLISFSPVP 360
Query: 1081 SEQRDMDLSHDEQQNTSSELENNGEIPAAENQIVEEITAENQETSVEEGNREIQVKIPLK 1260
SEQRDMDLSHDEQQNTSSELENNGEIPAAENQIVEEITAENQETSVEEGNREIQVKIPLK
Sbjct: 361 SEQRDMDLSHDEQQNTSSELENNGEIPAAENQIVEEITAENQETSVEEGNREIQVKIPLK 420
Query: 1261 QDSLSLHGQMLQYPVAIILPVLMHTAIEFHKWTTSTMANRDEMCFHNHACARPLGELRAW 1440
QDSLSLHGQMLQYPVAIILPVLMHTAIEFHKWTTSTMANRDEMCFHNHACARPLGELRAW
Sbjct: 421 QDSLSLHGQMLQYPVAIILPVLMHTAIEFHKWTTSTMANRDEMCFHNHACARPLGELRAW 480
Query: 1441 NNIITNIGYTLYGAIFIVLSICRRGRHEYSHVFGTYECTLLDVTIGVFMVLQSIASATYH 1620
NNIITNIGYTLYGAIFIVLSICRRGRHEYSHVFGTYECTLLDVTIGVFMVLQSIASATYH
Sbjct: 481 NNIITNIGYTLYGAIFIVLSICRRGRHEYSHVFGTYECTLLDVTIGVFMVLQSIASATYH 540
Query: 1621 ICPSDVAFQFDTPCIQVICGLLMVRQWFVRHESPSPAYTNILLVGVVSLNFLISAFSKTS 1800
ICPSDVAFQFDTPCIQVICGLLMVRQWFVRHESPSPAYTNILLVGVVSLNFLISAFSKTS
Sbjct: 541 ICPSDVAFQFDTPCIQVICGLLMVRQWFVRHESPSPAYTNILLVGVVSLNFLISAFSKTS 600
Query: 1801 YVRFIIAVIHVIVVGSICLAKERSLGSEKLKTRFFIMAFSMGNFAAIVMYLTLSAFHLNQ 1980
YVRFIIAVIHVIVVGSICLAKERSLGSEKLKTRFFIMAFSMGNFAAIVMYLTLSAFHLNQ
Sbjct: 601 YVRFIIAVIHVIVVGSICLAKERSLGSEKLKTRFFIMAFSMGNFAAIVMYLTLSAFHLNQ 660
Query: 1981 IATYCFIINCIMYLMYYGCMKVLHSERITSKAKLCGALSLLAWAVAGFFFFQDDTDWTRS 2160
IATYCFIINCIMYLMYYGCMKVLHSERITSKAKLCGALSLLAWAVAGFFFFQDDTDWTRS
Sbjct: 661 IATYCFIINCIMYLMYYGCMKVLHSERITSKAKLCGALSLLAWAVAGFFFFQDDTDWTRS 720
Query: 2161 AAASRALNKPCLLLGFFGSHDLWHIFGALAGLFTFIFVSFVDDDLINTRKTSINIF 2328
AAASRALNKPCLLLGFFGSHDLWHIFGALAGLFTFIFVSFVDDDLINTRKTSINIF
Sbjct: 721 AAASRALNKPCLLLGFFGSHDLWHIFGALAGLFTFIFVSFVDDDLINTRKTSINIF 776
>gi|39583988|emb|CAE64078.1| Hypothetical protein CBG08682
[Caenorhabditis briggsae]
Length = 747
Score = 906 bits (2342), Expect = 0.0
Identities = 454/745 (60%), Positives = 578/745 (76%), Gaps = 3/745 (0%)
Frame = +1
Query: 103 VLVFEISSKMKMIEKKLEANTVHVLRLELDQSFILDLTKVAAEIVDSSKYSKEDGVILEV 282
+ V E ++ + I L ANTVHV L+LD++FILDLT+++A++ + + + KE ILEV
Sbjct: 32 ISVREFPARRRQINDTLVANTVHVYYLKLDETFILDLTRISADVSEPALFRKEVDTILEV 91
Query: 283 TVSNGRDSFLLKLPTVYPNLKLYTDGKLLNPLVEQDFGAHRKRHRIGDPH--FHQNLIVT 456
TVSNGRD+F+LKLP +YP+L LY+ GKLLNPL ++DFG R + I + QNL++T
Sbjct: 92 TVSNGRDNFILKLPMIYPDLTLYSYGKLLNPLRKEDFGPKRSKKNIPSENSTLSQNLVIT 151
Query: 457 VQSRLNADIDYRLHVTHLDRAQYDFLKFKTGQTTKTLSNQKLTFVKPIGFFLNCSEQNIS 636
VQSRL DIDY+LH+T LDR+QY+ L FK GQ+TKTL+NQKLTFVKPIGFFL+ EQ +
Sbjct: 152 VQSRLRVDIDYQLHLTRLDRSQYN-LSFKEGQSTKTLNNQKLTFVKPIGFFLDTEEQIVK 210
Query: 637 QFHVTLYSEDDICANLITVPANESIYDRSVISDKTHNRRVLSFTKRADIFFTETEISMFK 816
FH+TL S DDICAN+IT PANESIY+R V SD+ NRRVL+FT+RADIFF+ETEI +FK
Sbjct: 211 SFHITLTSADDICANVITAPANESIYERPVDSDRADNRRVLTFTRRADIFFSETEIQLFK 270
Query: 817 SFRIFVFIAPDDSGCSTNTSRKSFNEKKKISFEFKKLENQSYAVPTALMMIFLTTPCLLF 996
+FRIFVFI+P ++ CS NTSRK++NE KKI+F+F +LE SY VPT M++F +PCL+F
Sbjct: 271 TFRIFVFISPVNAPCSGNTSRKNYNEIKKITFDFTRLEPNSYFVPTLAMLVFFASPCLIF 330
Query: 997 L-PIVINIIKNSRKLAPSQSNLISFSPVPSEQRDMDLSHDEQQNTSSELENNGEIPAAEN 1173
+ + +N+I+N L ++LISF S D+ NTS+ ENN A N
Sbjct: 331 IASLTVNVIRNRSDLV---ADLISF------------SSDQSANTSAIAENN----MAHN 371
Query: 1174 QIVEEITAENQETSVEEGNREIQVKIPLKQDSLSLHGQMLQYPVAIILPVLMHTAIEFHK 1353
+I + E + V+E IP+KQDSLSLHGQM +YPVA+ILPVLMHT +EFH
Sbjct: 372 EIA--VIPEEENLQVQEIE-----PIPIKQDSLSLHGQMFKYPVALILPVLMHTGVEFHN 424
Query: 1354 WTTSTMANRDEMCFHNHACARPLGELRAWNNIITNIGYTLYGAIFIVLSICRRGRHEYSH 1533
+TTSTMANRDEMCFHN+ACA+PLGELR+WNN+I+NIGY +YG +FI++++CRR RH +S
Sbjct: 425 FTTSTMANRDEMCFHNNACAKPLGELRSWNNMISNIGYAIYGLVFIMVTMCRRWRH-HSP 483
Query: 1534 VFGTYECTLLDVTIGVFMVLQSIASATYHICPSDVAFQFDTPCIQVICGLLMVRQWFVRH 1713
+ GTYECTLLD+TIG+FM+LQ+IASATYHICPSD+AFQFDTPCIQVICGLL++RQW VR
Sbjct: 484 LVGTYECTLLDITIGLFMILQAIASATYHICPSDIAFQFDTPCIQVICGLLIIRQWLVRQ 543
Query: 1714 ESPSPAYTNILLVGVVSLNFLISAFSKTSYVRFIIAVIHVIVVGSICLAKERSLGSEKLK 1893
ESPSPAYTNILL VVSLNFLISA SK S +R++IA+IH VV ++CLAK ++L S+++
Sbjct: 544 ESPSPAYTNILLFCVVSLNFLISACSKASGIRYLIAIIHFGVVATVCLAKRKTLRSKQV- 602
Query: 1894 TRFFIMAFSMGNFAAIVMYLTLSAFHLNQIATYCFIINCIMYLMYYGCMKVLHSERITSK 2073
+ F+ F++ NF AI +Y+T S HLNQI+TYCFI+NCI+YL YY MK E I K
Sbjct: 603 YKVFVGTFAIFNFFAITIYVTSSYIHLNQISTYCFILNCILYLTYYALMKFASRESIELK 662
Query: 2074 AKLCGALSLLAWAVAGFFFFQDDTDWTRSAAASRALNKPCLLLGFFGSHDLWHIFGALAG 2253
AK+CG ++ W +AGFFFFQDDTDWTR+AA SRALN PCLLL FFGSHDLWH+FGA+AG
Sbjct: 663 AKVCGVSAIFGWLIAGFFFFQDDTDWTRTAAMSRALNTPCLLLDFFGSHDLWHMFGAIAG 722
Query: 2254 LFTFIFVSFVDDDLINTRKTSINIF 2328
LFTF+FVSFVDDDLINT K+SIN++
Sbjct: 723 LFTFLFVSFVDDDLINTPKSSINMY 747
>gi|7495369|pir||T33773 hypothetical protein C04F5.1 - Caenorhabditis
elegans
Length = 647
Score = 792 bits (2046), Expect = 0.0
Identities = 406/423 (95%), Positives = 407/423 (95%)
Frame = +1
Query: 1 MIRVYLIILMHLVIGLTQXXXXXXXXXXXXXXXXVLVFEISSKMKMIEKKLEANTVHVLR 180
MIRVYLIILMHLVIGLTQ VLVFEISSKMKMIEKKLEANTVHVLR
Sbjct: 1 MIRVYLIILMHLVIGLTQNNSTTPSPIITSSNSSVLVFEISSKMKMIEKKLEANTVHVLR 60
Query: 181 LELDQSFILDLTKVAAEIVDSSKYSKEDGVILEVTVSNGRDSFLLKLPTVYPNLKLYTDG 360
LELDQSFILDLTKVAAEIVDSSKYSKEDGVILEVTVSNGRDSFLLKLPTVYPNLKLYTDG
Sbjct: 61 LELDQSFILDLTKVAAEIVDSSKYSKEDGVILEVTVSNGRDSFLLKLPTVYPNLKLYTDG 120
Query: 361 KLLNPLVEQDFGAHRKRHRIGDPHFHQNLIVTVQSRLNADIDYRLHVTHLDRAQYDFLKF 540
KLLNPLVEQDFGAHRKRHRIGDPHFHQNLIVTVQSRLNADIDYRLHVTHLDRAQYDFLKF
Sbjct: 121 KLLNPLVEQDFGAHRKRHRIGDPHFHQNLIVTVQSRLNADIDYRLHVTHLDRAQYDFLKF 180
Query: 541 KTGQTTKTLSNQKLTFVKPIGFFLNCSEQNISQFHVTLYSEDDICANLITVPANESIYDR 720
KTGQTTKTLSNQKLTFVKPIGFFLNCSEQNISQFHVTLYSEDDICANLITVPANESIYDR
Sbjct: 181 KTGQTTKTLSNQKLTFVKPIGFFLNCSEQNISQFHVTLYSEDDICANLITVPANESIYDR 240
Query: 721 SVISDKTHNRRVLSFTKRADIFFTETEISMFKSFRIFVFIAPDDSGCSTNTSRKSFNEKK 900
SVISDKTHNRRVLSFTKRADIFFTETEISMFKSFRIFVFIAPDDSGCSTNTSRKSFNEKK
Sbjct: 241 SVISDKTHNRRVLSFTKRADIFFTETEISMFKSFRIFVFIAPDDSGCSTNTSRKSFNEKK 300
Query: 901 KISFEFKKLENQSYAVPTALMMIFLTTPCLLFLPIVINIIKNSRKLAPSQSNLISFSPVP 1080
KISFEFKKLENQSYAVPTALMMIFLTTPCLLFLPIVINIIKNSRKLAPSQSNLISFSPVP
Sbjct: 301 KISFEFKKLENQSYAVPTALMMIFLTTPCLLFLPIVINIIKNSRKLAPSQSNLISFSPVP 360
Query: 1081 SEQRDMDLSHDEQQNTSSELENNGEIPAAENQIVEEITAENQETSVEEGNREIQVKIPLK 1260
SEQRDMDLSHDEQQNTSSELENNGEIPAAENQIVEEITAENQETSVEEGNREIQVKIPLK
Sbjct: 361 SEQRDMDLSHDEQQNTSSELENNGEIPAAENQIVEEITAENQETSVEEGNREIQVKIPLK 420
Query: 1261 QDS 1269
QD+
Sbjct: 421 QDT 423
Score = 456 bits (1174), Expect = e-127
Identities = 226/226 (100%), Positives = 226/226 (100%)
Frame = +1
Query: 1651 DTPCIQVICGLLMVRQWFVRHESPSPAYTNILLVGVVSLNFLISAFSKTSYVRFIIAVIH 1830
DTPCIQVICGLLMVRQWFVRHESPSPAYTNILLVGVVSLNFLISAFSKTSYVRFIIAVIH
Sbjct: 422 DTPCIQVICGLLMVRQWFVRHESPSPAYTNILLVGVVSLNFLISAFSKTSYVRFIIAVIH 481
Query: 1831 VIVVGSICLAKERSLGSEKLKTRFFIMAFSMGNFAAIVMYLTLSAFHLNQIATYCFIINC 2010
VIVVGSICLAKERSLGSEKLKTRFFIMAFSMGNFAAIVMYLTLSAFHLNQIATYCFIINC
Sbjct: 482 VIVVGSICLAKERSLGSEKLKTRFFIMAFSMGNFAAIVMYLTLSAFHLNQIATYCFIINC 541
Query: 2011 IMYLMYYGCMKVLHSERITSKAKLCGALSLLAWAVAGFFFFQDDTDWTRSAAASRALNKP 2190
IMYLMYYGCMKVLHSERITSKAKLCGALSLLAWAVAGFFFFQDDTDWTRSAAASRALNKP
Sbjct: 542 IMYLMYYGCMKVLHSERITSKAKLCGALSLLAWAVAGFFFFQDDTDWTRSAAASRALNKP 601
Query: 2191 CLLLGFFGSHDLWHIFGALAGLFTFIFVSFVDDDLINTRKTSINIF 2328
CLLLGFFGSHDLWHIFGALAGLFTFIFVSFVDDDLINTRKTSINIF
Sbjct: 602 CLLLGFFGSHDLWHIFGALAGLFTFIFVSFVDDDLINTRKTSINIF 647