Homology by BLASTX


BLASTX 2.2.4 [Aug-26-2002]
Query= C01A2_5
         (663 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|17505400|ref|NP_493358.1| putative endoplasmic reticulum prot...   451   e-126
gi|39582546|emb|CAE63865.1| Hypothetical protein CBG08428 [Caeno...   432   e-120
gi|14043042|ref|NP_112477.1| chemokine (C-C motif) receptor 9 is...    35   1.0
gi|14043044|ref|NP_006632.2| chemokine (C-C motif) receptor 9 is...    35   1.0
gi|15829162|ref|NP_326522.1| unknown; predicted coding region [M...    35   1.3
gi|21223602|ref|NP_629381.1| putative sugar transporter integral...    35   1.7
gi|27764293|emb|CAD60573.1| unnamed protein product [Podospora a...    34   2.9
gi|10178920|emb|CAC08458.1| 1-D-desoxyxylulose 5-phosphate synth...    33   3.8
gi|15234309|ref|NP_192917.1| calcineurin-like phosphoesterase fa...    33   5.0
gi|18921325|gb|AAL82530.1| putative cellulose synthase [Oryza sa...    33   6.6


>gi|17505400|ref|NP_493358.1| putative endoplasmic reticulum
           protein, with at least 3 transmembrane domains (25.3 kD)
           (1N989) [Caenorhabditis elegans]
 gi|7495046|pir||T18792 hypothetical protein C01A2.2 -
           Caenorhabditis elegans
 gi|3873833|emb|CAB02696.1| Hypothetical protein C01A2.2
           [Caenorhabditis elegans]
          Length = 220

 Score =  451 bits (1160), Expect = e-126
 Identities = 220/220 (100%), Positives = 220/220 (100%)
 Frame = +1

Query: 1   MSSWRSKIPTVTQVQHFLRGIVYEQEVDYSRFETKLDGSEVITFRENDKAFRLFGTNVHV 180
           MSSWRSKIPTVTQVQHFLRGIVYEQEVDYSRFETKLDGSEVITFRENDKAFRLFGTNVHV
Sbjct: 1   MSSWRSKIPTVTQVQHFLRGIVYEQEVDYSRFETKLDGSEVITFRENDKAFRLFGTNVHV 60

Query: 181 KVGSYIACAIGFAVTIAFCVSYSLFHSRGQGRNPFIDHLEIIDLIFAFLVGLPCHILLFY 360
           KVGSYIACAIGFAVTIAFCVSYSLFHSRGQGRNPFIDHLEIIDLIFAFLVGLPCHILLFY
Sbjct: 61  KVGSYIACAIGFAVTIAFCVSYSLFHSRGQGRNPFIDHLEIIDLIFAFLVGLPCHILLFY 120

Query: 361 GLQKSKKVFFSPFLVFYMTNFILNCIFTILTLGAFAMDVHRRVFGNIRFDLGWTAFQICF 540
           GLQKSKKVFFSPFLVFYMTNFILNCIFTILTLGAFAMDVHRRVFGNIRFDLGWTAFQICF
Sbjct: 121 GLQKSKKVFFSPFLVFYMTNFILNCIFTILTLGAFAMDVHRRVFGNIRFDLGWTAFQICF 180

Query: 541 TAAQGLAIYVVMRGRKYVAAKSFWMNKYNQRTGPDDIIDA 660
           TAAQGLAIYVVMRGRKYVAAKSFWMNKYNQRTGPDDIIDA
Sbjct: 181 TAAQGLAIYVVMRGRKYVAAKSFWMNKYNQRTGPDDIIDA 220




[DB home][top]