Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= B0491_4
(1365 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|17531363|ref|NP_496423.1| neurotransmitter-gated ion-channel ... 892 0.0
gi|39597299|emb|CAE59527.1| Hypothetical protein CBG02922 [Caeno... 764 0.0
gi|25149188|ref|NP_740977.1| nicotinic receptor family member (4... 167 7e-40
gi|39587826|emb|CAE67844.1| Hypothetical protein CBG13431 [Caeno... 163 8e-39
gi|25149186|ref|NP_740978.1| nicotinic receptor family member (4... 162 2e-38
gi|39596424|emb|CAE63043.1| Hypothetical protein CBG07310 [Caeno... 104 4e-21
gi|17550782|ref|NP_510341.1| nicotinic acetylcholine receptor be... 100 6e-20
gi|39587553|emb|CAE58491.1| Hypothetical protein CBG01635 [Caeno... 65 3e-09
gi|17539852|ref|NP_500538.1| acetylcholine receptor family membe... 63 2e-08
gi|39752854|gb|AAB92062.2| Hypothetical protein F15E6.2 [Caenorh... 56 2e-06
gi|1351852|sp|P49579|ACHB_XENLA Acetylcholine receptor protein, ... 52 4e-05
gi|17566040|ref|NP_503167.1| acetylcholine receptor family membe... 44 0.012
gi|27806249|ref|NP_776941.1| cholinergic receptor, nicotinic, be... 44 0.012
gi|21397152|gb|AAM51823.1| neuronal nicotinic acetylcholine rece... 43 0.020
gi|49899072|gb|AAH76789.1| Unknown (protein for MGC:83706) [Xeno... 42 0.026
gi|2764509|emb|CAA04053.1| nicotinic acetylcholine receptor, alp... 42 0.034
gi|17548195|ref|NP_510285.1| acetylcholine receptor, one of nine... 42 0.034
gi|50507725|emb|CAA94206.2| Hypothetical protein C40C9.2 [Caenor... 42 0.034
gi|33589827|ref|NP_000736.2| cholinergic receptor, nicotinic, al... 42 0.044
gi|1458116|gb|AAB40112.1| nicotinic acetylcholine receptor alpha... 42 0.044
gi|18699596|gb|AAL78648.1| nicotinic acetylcholine receptor alph... 41 0.058
gi|39653653|gb|AAR29365.1| acetylcholine receptor beta subunit [... 41 0.058
gi|17738173|ref|NP_524482.1| CG6844-PA [Drosophila melanogaster]... 41 0.075
gi|6978657|ref|NP_036660.1| cholinergic receptor, nicotinic, bet... 41 0.075
gi|31205939|ref|XP_311921.1| ENSANGP00000000239 [Anopheles gambi... 41 0.075
gi|4191494|gb|AAD09808.1| nicotinic acetylcholine receptor alpha... 40 0.099
gi|48096050|ref|XP_394591.1| similar to nicotinic acetylcholine ... 40 0.099
gi|21450163|ref|NP_659052.1| cholinergic receptor, nicotinic, al... 40 0.13
gi|104800|pir||B39218 nicotinic acetylcholine receptor alpha-5 c... 40 0.13
gi|223613|prf||0903243A acetylcholine receptor beta 40 0.13
gi|113084|sp|P02712|ACHB_TORCA Acetylcholine receptor protein, b... 40 0.13
gi|19173792|ref|NP_596911.1| cholinergic receptor, nicotinic, al... 40 0.13
gi|112053|pir||A40110 nicotinic acetylcholine receptor alpha-2 c... 40 0.13
gi|17543742|ref|NP_502777.1| nicotinic acetylcholine receptor Da... 40 0.17
gi|27806245|ref|NP_776939.1| cholinergic receptor, nicotinic, al... 40 0.17
gi|31872128|gb|AAP59877.1| nicotinic acetylcholine receptor beta... 40 0.17
gi|47212225|emb|CAF91943.1| unnamed protein product [Tetraodon n... 40 0.17
gi|283973|pir||A38223 nicotinic acetylcholine receptor alpha-5 c... 39 0.22
gi|31790119|gb|AAP58385.1| nicotinic acetylcholine receptor alph... 39 0.22
gi|113085|sp|P04759|ACHD_BOVIN Acetylcholine receptor protein, d... 39 0.29
gi|31981912|ref|NP_033731.2| cholinergic receptor, nicotinic, be... 39 0.29
gi|113082|sp|P09690|ACHB_MOUSE Acetylcholine receptor protein, b... 39 0.29
gi|50752779|ref|XP_413741.1| PREDICTED: cholinergic receptor, ni... 39 0.37
gi|4502833|ref|NP_000739.1| cholinergic receptor, nicotinic, bet... 39 0.37
gi|17569201|ref|NP_510359.1| acetylcholine receptor family membe... 39 0.37
gi|39596486|emb|CAE63105.1| Hypothetical protein CBG07400 [Caeno... 39 0.37
gi|18490288|gb|AAH22488.1| GABRA2 protein [Homo sapiens] 39 0.37
gi|3766451|emb|CAA05108.1| CHRNB2 [Homo sapiens] 39 0.37
gi|45382227|ref|NP_990144.1| beta-2 subunit, nicotinic acetylcho... 38 0.49
gi|630499|pir||S44741 C02C2.3 protein - Caenorhabditis elegans 38 0.49
gi|8393126|ref|NP_058774.1| cholinergic receptor, nicotinic, alp... 38 0.49
gi|46371165|gb|AAS90351.1| neuronal nicotinic acetylcholine rece... 38 0.49
gi|46559780|ref|NP_789814.2| cholinergic receptor, nicotinic, al... 38 0.49
gi|25149303|ref|NP_498710.2| receptor nicotinic family member (4... 38 0.49
gi|88265|pir||S04607 nicotinic acetylcholine receptor beta-1 cha... 38 0.49
gi|9790622|gb|AAB37533.2| 5-hydroxytryptamine type 3AS receptor ... 38 0.49
gi|6625911|gb|AAF19423.1| nicotinic acetylcholine receptor alpha... 38 0.49
gi|113103|sp|P19370|ACHN_CARAU Neuronal acetylcholine receptor p... 38 0.49
gi|50507834|emb|CAH04731.1| Hypothetical protein Y57G11C.49 [Cae... 38 0.64
gi|47213021|emb|CAF93508.1| unnamed protein product [Tetraodon n... 38 0.64
gi|31790081|gb|AAP58377.1| nicotinic acetylcholine receptor alph... 38 0.64
gi|1333852|emb|CAA27443.1| acetylcholine receptor gamma [Mus mus... 37 0.83
gi|226135|prf||1411303A GABA receptor alpha2 37 0.83
gi|50747025|ref|XP_420725.1| PREDICTED: similar to gamma-aminobu... 37 0.83
gi|1168296|sp|P26152|ACH5_CHICK Neuronal acetylcholine receptor ... 37 0.83
gi|6679901|ref|NP_032092.1| gamma-aminobutyric acid (GABA-A) rec... 37 0.83
gi|4557601|ref|NP_000798.1| gamma-aminobutyric acid A receptor, ... 37 0.83
gi|27806981|ref|NP_776966.1| gamma-aminobutyric acid (GABA) A re... 37 0.83
gi|2119577|pir||I56566 nicotinic acetylcholine receptor gamma ch... 37 0.83
gi|31982815|ref|NP_033734.2| cholinergic receptor, nicotinic, ga... 37 0.83
gi|113099|sp|P04760|ACHG_MOUSE Acetylcholine receptor protein, g... 37 0.83
gi|39587708|emb|CAE58646.1| Hypothetical protein CBG01814 [Caeno... 37 0.83
gi|50760131|ref|XP_425806.1| PREDICTED: similar to serotonin rec... 37 0.83
gi|204204|gb|AAC42030.1| GABA-A receptor alpha-2 subunit [Rattus... 37 0.83
gi|92551|pir||JH0174 nicotinic acetylcholine receptor beta-2 cha... 37 1.1
gi|4927273|gb|AAD33069.1| neuronal nicotinic acetylcholine recep... 37 1.1
gi|10803055|gb|AAG23697.1| neuronal nicotinic acetylcholine rece... 37 1.1
gi|31542397|ref|NP_033732.2| cholinergic receptor, nicotinic, be... 37 1.1
gi|6435835|gb|AAD44476.2| neuronal nicotinic acetylcholine recep... 37 1.1
gi|9506485|ref|NP_062170.1| cholinergic receptor, nicotinic, bet... 37 1.1
gi|113058|sp|P18845|ACH3_CARAU Neuronal acetylcholine receptor p... 37 1.4
gi|21654710|gb|AAK72491.1| nicotinic acetylcholine receptor alph... 37 1.4
gi|18699598|gb|AAL78649.1| nicotinic acetylcholine receptor alph... 37 1.4
gi|47519841|ref|NP_998786.1| 5-hydroxytryptamine (serotonin) rec... 37 1.4
gi|4502823|ref|NP_000733.1| cholinergic receptor, nicotinic, alp... 37 1.4
gi|34877318|ref|XP_223378.2| similar to Gamma-aminobutyric-acid ... 37 1.4
gi|50507833|emb|CAB16504.2| Hypothetical protein Y57G11C.2 [Caen... 37 1.4
gi|120758|sp|P23576|GAA2_RAT Gamma-aminobutyric-acid receptor al... 37 1.4
gi|1586341|prf||2203408A serotonin 3AS receptor 37 1.4
gi|4504543|ref|NP_000860.1| 5-hydroxytryptamine (serotonin) rece... 37 1.4
gi|30585371|gb|AAP36958.1| Homo sapiens 5-hydroxytryptamine (ser... 37 1.4
gi|31872126|gb|AAP59876.1| nicotinic acetylcholine receptor beta... 37 1.4
gi|30583247|gb|AAP35868.1| 5-hydroxytryptamine (serotonin) recep... 37 1.4
gi|17541476|ref|NP_502534.1| LEVamisole resistant LEV-1, acetylc... 36 1.9
gi|9506489|ref|NP_062018.1| cholinergic receptor, nicotinic, gam... 36 1.9
gi|7498743|pir||T22910 hypothetical protein F09E8.7 - Caenorhabd... 36 1.9
gi|8247752|dbj|BAA96417.1| ferret 5-HT3A receptor [Mustela putor... 36 2.4
gi|39596249|emb|CAE69887.1| Hypothetical protein CBG16227 [Caeno... 36 2.4
gi|47220244|emb|CAG03278.1| unnamed protein product [Tetraodon n... 36 2.4
gi|41327726|ref|NP_000738.2| nicotinic acetylcholine receptor be... 36 2.4
gi|23272123|gb|AAH23553.1| Nicotinic acetylcholine receptor beta... 36 2.4
gi|113102|sp|P05376|ACHG_XENLA Acetylcholine receptor protein, g... 36 2.4
gi|39597130|emb|CAE59357.1| Hypothetical protein CBG02706 [Caeno... 36 2.4
gi|24211440|sp|O70212|5HT3_CAVPO 5-hydroxytryptamine 3 receptor ... 35 3.2
gi|113096|sp|P02713|ACHG_CHICK Acetylcholine receptor protein, g... 35 3.2
gi|71999|pir||ACCHG1 nicotinic acetylcholine receptor gamma chai... 35 3.2
gi|50752427|ref|XP_426706.1| PREDICTED: similar to Acetylcholine... 35 3.2
gi|560155|emb|CAA32939.1| unnamed protein product [Homo sapiens] 35 3.2
gi|17548201|ref|NP_509270.1| acetylcholine receptor (51.1 kD) (a... 35 3.2
gi|39930467|ref|NP_113921.1| gamma-aminobutyric acid A receptor... 35 3.2
gi|2978508|gb|AAC06137.1| 5-HT3-As receptor precursor [Cavia por... 35 3.2
gi|5706485|emb|CAB52299.1| nicotinic acetylcholine receptor alph... 35 4.1
gi|47215713|emb|CAG04797.1| unnamed protein product [Tetraodon n... 35 4.1
gi|39653645|gb|AAR29361.1| acetylcholine receptor beta subunit [... 35 4.1
gi|31790087|gb|AAP58379.1| nicotinic acetylcholine receptor alph... 35 4.1
gi|31096342|gb|AAP43507.1| nicotinic acetylcholine receptor delt... 35 4.1
gi|34148148|gb|AAQ62632.1| nicotinic acetylcholine receptor beta... 35 5.4
gi|47225390|emb|CAG11873.1| unnamed protein product [Tetraodon n... 35 5.4
gi|31790085|gb|AAP58378.1| nicotinic acetylcholine receptor alph... 35 5.4
gi|45382091|ref|NP_990091.1| neuronal acetylcholine receptor sub... 35 5.4
gi|40317591|gb|AAR84359.1| nicotinic acetylcholine receptor alph... 34 7.1
gi|40317587|gb|AAR84357.1| nicotinic acetylcholine receptor alph... 34 7.1
gi|39589522|emb|CAE66757.1| Hypothetical protein CBG12109 [Caeno... 34 7.1
gi|25152142|ref|NP_509556.2| acetylcholine receptor like protein... 34 7.1
gi|6679905|ref|NP_032094.1| gamma-aminobutyric acid (GABA-A) rec... 34 7.1
gi|7382454|ref|NP_005190.3| cholinergic receptor, nicotinic, gam... 34 7.1
gi|113098|sp|P07510|ACHG_HUMAN Acetylcholine receptor protein, g... 34 7.1
gi|40317595|gb|AAR84361.1| nicotinic acetylcholine receptor alph... 34 7.1
gi|47216178|emb|CAG03166.1| unnamed protein product [Tetraodon n... 34 7.1
gi|38372984|gb|AAR18840.1| NADH dehydrogenase subunit 2 [Diploda... 34 7.1
gi|17548191|ref|NP_509129.1| acetylcholine receptor, non-alpha n... 34 7.1
gi|39586735|emb|CAE65777.1| Hypothetical protein CBG10872 [Caeno... 34 7.1
gi|39581428|emb|CAE74710.1| Hypothetical protein CBG22525 [Caeno... 34 7.1
gi|5813763|gb|AAD52001.1| GABAA receptor alpha 6 subunit [Mus mu... 34 7.1
gi|48429233|sp|P54245|YZN4_CAEEL Hypothetical acetylcholine rece... 34 7.1
gi|313864|emb|CAA51089.1| 5-hydroxytryptamine3 receptor [Mus mus... 34 9.2
gi|21314591|gb|AAM47014.1| 5-hydroxytryptamine receptor 3A short... 34 9.2
gi|488695|emb|CAA55871.1| 5HT3 receptor [Mus musculus] 34 9.2
gi|47717376|gb|AAT37716.1| serotonin-gated ion channel subunit A... 34 9.2
gi|50507762|emb|CAB02858.2| Hypothetical protein C50B6.11 [Caeno... 34 9.2
gi|44004347|ref|NP_982015.1| hypothetical protein BCEA0008 [Baci... 34 9.2
gi|48095856|ref|XP_394535.1| neuronal nicotinic acetylcholine re... 34 9.2
gi|817940|emb|CAA80453.1| 5HT3 receptor [Mus musculus] 34 9.2
gi|10048422|ref|NP_065234.1| gamma-aminobutyric acid (GABA-A) re... 34 9.2
gi|38372968|gb|AAR18828.1| NADH dehydrogenase subunit 2 [Diploda... 34 9.2
gi|113091|sp|P09628|ACHD_XENLA Acetylcholine receptor protein, d... 34 9.2
gi|39589657|emb|CAE66892.1| Hypothetical protein CBG12273 [Caeno... 34 9.2
gi|7305175|ref|NP_038589.1| 5-hydroxytryptamine (serotonin) rece... 34 9.2
gi|39584047|emb|CAE66453.1| Hypothetical protein CBG11729 [Caeno... 34 9.2
gi|543183|pir||S41757 5-hydroxytryptamine-3 receptor - mouse 34 9.2
gi|488694|emb|CAA55870.1| 5HT3 receptor [Mus musculus] 34 9.2
gi|27545342|ref|NP_775394.1| cholinergic receptor, nicotinic, be... 34 9.2
>gi|17531363|ref|NP_496423.1| neurotransmitter-gated ion-channel with
standard ligand binding domain but atypical transmembrane
region family member (52.6 kD) (2L630) [Caenorhabditis
elegans]
gi|7494965|pir||T18765 hypothetical protein B0491.4 - Caenorhabditis
elegans
gi|3873803|emb|CAA90086.1| Hypothetical protein B0491.4
[Caenorhabditis elegans]
Length = 454
Score = 892 bits (2306), Expect = 0.0
Identities = 443/454 (97%), Positives = 443/454 (97%)
Frame = -1
Query: 1365 MSFLVLFGALLLIQTSEQMVQCRYTKNLTNRADGGDEHCLFYYLLNKEYEKSGSVHSLSA 1186
MSFLVLFGALLLIQTSEQMVQCRYTKNLTNRADGGDEHCLFYYLLNKEYEKSGSVHSLSA
Sbjct: 1 MSFLVLFGALLLIQTSEQMVQCRYTKNLTNRADGGDEHCLFYYLLNKEYEKSGSVHSLSA 60
Query: 1185 YPPNSDEMTITIENVLVKYVELVKGSSYQFNVFGDIYLNWKDERMKWDKKGEFENYEHLY 1006
YPPNSDEMTITIENVLVKYVELVKGSSYQFNVFGDIYLNWKDERMKWDKKGEFENYEHLY
Sbjct: 61 YPPNSDEMTITIENVLVKYVELVKGSSYQFNVFGDIYLNWKDERMKWDKKGEFENYEHLY 120
Query: 1005 IFNSSAIWTPHVIDHTLCSEGGCXXXXXXXXXXXDGTIYARIQFKYLASCTVDYRKFPEE 826
IFNSSAIWTPHVIDHTLCSEGGC DGTIYARIQFKYLASCTVDYRKFPEE
Sbjct: 121 IFNSSAIWTPHVIDHTLCSEGGCSYSVDDVDIYDDGTIYARIQFKYLASCTVDYRKFPEE 180
Query: 825 DDSCCIFFTAFEPNVEQTTLVLEGKEKEKMNRPVYAQKIYEKEKQLSDIVQEHSPWVVVE 646
DDSCCIFFTAFEPNVEQTTLVLEGKEKEKMNRPVYAQKIYEKEKQLSDIVQEHSPWVVVE
Sbjct: 181 DDSCCIFFTAFEPNVEQTTLVLEGKEKEKMNRPVYAQKIYEKEKQLSDIVQEHSPWVVVE 240
Query: 645 KTMSTSNLGGLKSLQVMQVCVRAEKQMSTVRVALLFPVTLATYVMLASPLFGDLRTQIYV 466
KTMSTSNLGGLKSLQVMQVCVRAEKQMSTVRVALLFPVTLATYVMLASPLFGDLRTQIYV
Sbjct: 241 KTMSTSNLGGLKSLQVMQVCVRAEKQMSTVRVALLFPVTLATYVMLASPLFGDLRTQIYV 300
Query: 465 KLFSLHIQTLCFLYLCTITPLNGFLGVRPRIYIFYELIFTISFMSILVTLVVMALSRVKR 286
KLFSLHIQTLCFLYLCTITPLNGFLGVRPRIYIFYELIFTISFMSILVTLVVMALSRVKR
Sbjct: 301 KLFSLHIQTLCFLYLCTITPLNGFLGVRPRIYIFYELIFTISFMSILVTLVVMALSRVKR 360
Query: 285 NVPPSHRLFLSAKLINRVVCCIEPERSDAYHRYVEEDTPESRTTSEVSQQQSVIRPGAEL 106
NVPPSHRLFLSAKLINRVVCCIEPERSDAYHRYVEEDTPESRTTSEVSQQQSVIRPGAEL
Sbjct: 361 NVPPSHRLFLSAKLINRVVCCIEPERSDAYHRYVEEDTPESRTTSEVSQQQSVIRPGAEL 420
Query: 105 DYTQDWRHIYLAMNNMFSALMFSVFLFMTFLEFF 4
DYTQDWRHIYLAMNNMFSALMFSVFLFMTFLEFF
Sbjct: 421 DYTQDWRHIYLAMNNMFSALMFSVFLFMTFLEFF 454
>gi|39597299|emb|CAE59527.1| Hypothetical protein CBG02922
[Caenorhabditis briggsae]
Length = 435
Score = 764 bits (1972), Expect = 0.0
Identities = 368/437 (84%), Positives = 405/437 (92%), Gaps = 1/437 (0%)
Frame = -1
Query: 1311 MVQCRYTKNLTNRADGGDEHCLFYYLLNKEYEKSGSVHSLSAYPPNSDEMTITIENVLVK 1132
MVQCRYTKNLTNRADGGDEHCLFYYLLN+E+E SGSVH+LS +PP SDEM ITIENVLVK
Sbjct: 1 MVQCRYTKNLTNRADGGDEHCLFYYLLNREFEDSGSVHTLSTFPPKSDEMKITIENVLVK 60
Query: 1131 YVELVKGSSYQFNVFGDIYLNWKDERMKWDKKGEFENYEHLYIFNSSAIWTPHVIDHTLC 952
YVELVKGSSYQFNVFGDIYLNWKDER+KWDKKGEFENY+HLYIFNSSAIW PHVIDHTLC
Sbjct: 61 YVELVKGSSYQFNVFGDIYLNWKDERLKWDKKGEFENYDHLYIFNSSAIWAPHVIDHTLC 120
Query: 951 SEGGCXXXXXXXXXXXDGTIYARIQFKYLASCTVDYRKFPEEDDSCCIFFTAFEPNVEQT 772
++GGC DGT+YARIQFKY ASC VDYRKFPEEDDSCCIFFTAFEPNV +T
Sbjct: 121 ADGGCSYSVDDIDIYDDGTVYARIQFKYQASCAVDYRKFPEEDDSCCIFFTAFEPNVLKT 180
Query: 771 TLVLEGKEKEKMNRPVYAQKIYEKEKQLSDIVQEHSPWVVVEKTMSTSNLGGLKSLQVMQ 592
+EGK KEK+NRPVYAQK+YEKE++LS++ QEHSPWVVVE+++S S+LGGL++L+V+Q
Sbjct: 181 KFEIEGKAKEKLNRPVYAQKVYEKEERLSEVAQEHSPWVVVERSISVSHLGGLETLEVLQ 240
Query: 591 VCVRAEKQMSTVRVALLFPVTLATYVMLASPLFGDLRTQIYVKLFSLHIQTLCFLYLCTI 412
VCV+AEKQMSTVRVALLFPVTLATYVMLASPLFGDLRTQI+VKLF+LH+QTLCFLYLCTI
Sbjct: 241 VCVKAEKQMSTVRVALLFPVTLATYVMLASPLFGDLRTQIFVKLFTLHVQTLCFLYLCTI 300
Query: 411 TPLNGFLGVRPRIYIFYELIFTISFMSILVTLVVMALSRVKRNVPPSHRLFLSAKLINRV 232
TPLNGFLGVRPRIYIFYE++FTISF SILVTLVVMALSRVKRNVPPSHRLFLSAKLINRV
Sbjct: 301 TPLNGFLGVRPRIYIFYEIVFTISFCSILVTLVVMALSRVKRNVPPSHRLFLSAKLINRV 360
Query: 231 VCCIEPERSDAYHRYVEEDT-PESRTTSEVSQQQSVIRPGAELDYTQDWRHIYLAMNNMF 55
VCCIEPER+DAYHR+VEE+T PE+R TSEV+ SVIR GAELDYTQDWRHIYLA+NNMF
Sbjct: 361 VCCIEPERTDAYHRFVEEETNPEARPTSEVN--DSVIRRGAELDYTQDWRHIYLALNNMF 418
Query: 54 SALMFSVFLFMTFLEFF 4
SALMFSVFLFMTFLEFF
Sbjct: 419 SALMFSVFLFMTFLEFF 435