Homology by BLASTX


BLASTX 2.2.4 [Aug-26-2002]
Query= B0432_10
         (543 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|17531321|ref|NP_493695.1| mitochondrial ribosomal protein L41...   374   e-103
gi|39586903|emb|CAE62838.1| Hypothetical protein CBG07017 [Caeno...   338   5e-92
gi|27706150|ref|XP_216010.1| similar to mitochondrial ribosomal ...    51   1e-05
gi|27720967|ref|XP_236478.1| similar to mitochondrial ribosomal ...    51   1e-05
gi|26328195|dbj|BAC27838.1| unnamed protein product [Mus musculus]     48   1e-04
gi|38074560|ref|XP_355316.1| similar to mitochondrial ribosomal ...    48   1e-04
gi|12833949|dbj|BAB22727.1| unnamed protein product [Mus musculu...    48   1e-04
gi|38086245|ref|XP_357721.1| similar to mitochondrial ribosomal ...    47   2e-04
gi|48735076|gb|AAH72329.1| Unknown (protein for MGC:83146) [Xeno...    47   2e-04
gi|50757492|ref|XP_415536.1| PREDICTED: similar to mitochondrial...    46   4e-04
gi|47206029|emb|CAF90467.1| unnamed protein product [Tetraodon n...    45   6e-04
gi|49670436|gb|AAH75195.1| Unknown (protein for MGC:83404) [Xeno...    45   8e-04
gi|21265093|ref|NP_115866.1| mitochondrial ribosomal protein L41...    44   0.002
gi|31248150|ref|XP_322020.1| ENSANGP00000012155 [Anopheles gambi...    41   0.012
gi|21687222|ref|NP_611022.2| CG12954-PA [Drosophila melanogaster...    41   0.012
gi|21555549|gb|AAM63883.1| unknown [Arabidopsis thaliana]              39   0.044
gi|10177978|dbj|BAB11384.1| unnamed protein product [Arabidopsis...    39   0.044
gi|15242565|ref|NP_198824.1| 60S ribosomal protein-related [Arab...    39   0.044
gi|18421913|ref|NP_568574.1| 60S ribosomal protein-related [Arab...    39   0.044
gi|15828682|ref|NP_326042.1| unknown; predicted coding region [M...    37   0.17
gi|29829439|ref|NP_824073.1| modular polyketide synthase [Strept...    35   1.1
gi|23481218|gb|EAA17561.1| hypothetical protein [Plasmodium yoel...    35   1.1
gi|23612124|ref|NP_703704.1| hypothetical protein [Plasmodium fa...    34   1.4
gi|20094481|ref|NP_614328.1| Uncharacterized protein [Methanopyr...    33   2.4
gi|32414893|ref|XP_327926.1| predicted protein [Neurospora crass...    33   4.2
gi|49617210|gb|AAT67388.1| epithelial adhesin 6 [Candida glabrata]     33   4.2
gi|50285521|ref|XP_445189.1| unnamed protein product [Candida gl...    33   4.2
gi|38102508|gb|EAA49341.1| hypothetical protein MG00999.4 [Magna...    33   4.2
gi|32475346|ref|NP_868340.1| hypothetical protein RB8394 [Pirell...    32   5.4
gi|558753|gb|AAC46496.1| SEC-1 >gnl|BL_ORD_ID|1961201 gi|1093371...    32   5.4
gi|26337901|dbj|BAC32636.1| unnamed protein product [Mus musculus]     32   5.4
gi|38109978|gb|EAA55768.1| hypothetical protein MG01419.4 [Magna...    32   5.4
gi|27808566|gb|AAO24563.1| At5g14140 [Arabidopsis thaliana]            32   7.1
gi|32472062|ref|NP_865056.1| putative deoxyribonuclease yabD [Pi...    32   7.1
gi|15241318|ref|NP_196918.1| zinc finger (C2H2 type) family prot...    32   7.1
gi|46115252|ref|XP_383644.1| hypothetical protein FG03468.1 [Gib...    32   7.1
gi|13095843|ref|NP_076733.1| Orf38 [Bacteriophage bIL309] >gnl|B...    32   9.3
gi|50744808|ref|XP_419884.1| PREDICTED: similar to Regulating sy...    32   9.3


>gi|17531321|ref|NP_493695.1| mitochondrial ribosomal protein L41
           like (20.9 kD) (2A579) [Caenorhabditis elegans]
 gi|7494945|pir||T25460 hypothetical protein B0432.3 -
           Caenorhabditis elegans
 gi|1707148|gb|AAB37899.1| Hypothetical protein B0432.3
           [Caenorhabditis elegans]
          Length = 180

 Score =  374 bits (960), Expect = e-103
 Identities = 180/180 (100%), Positives = 180/180 (100%)
 Frame = +1

Query: 1   MKLVLVSTRGVRSLNSTNFPAPWPFVKKGAFGQRKIGPMNYEKFKWPGQNREFPELSPKF 180
           MKLVLVSTRGVRSLNSTNFPAPWPFVKKGAFGQRKIGPMNYEKFKWPGQNREFPELSPKF
Sbjct: 1   MKLVLVSTRGVRSLNSTNFPAPWPFVKKGAFGQRKIGPMNYEKFKWPGQNREFPELSPKF 60

Query: 181 QKLNPKELHRYTGVQADGFHDEKTGEFVPVKEMRSELVVPNLDGFKLRPYVSYRTDVQIE 360
           QKLNPKELHRYTGVQADGFHDEKTGEFVPVKEMRSELVVPNLDGFKLRPYVSYRTDVQIE
Sbjct: 61  QKLNPKELHRYTGVQADGFHDEKTGEFVPVKEMRSELVVPNLDGFKLRPYVSYRTDVQIE 120

Query: 361 KRRVAYEKKVLEKGSERLADLHTVEDERWPPPKMSAETLFELAYGDTVRSAYKEGKYGNK 540
           KRRVAYEKKVLEKGSERLADLHTVEDERWPPPKMSAETLFELAYGDTVRSAYKEGKYGNK
Sbjct: 121 KRRVAYEKKVLEKGSERLADLHTVEDERWPPPKMSAETLFELAYGDTVRSAYKEGKYGNK 180




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