Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= B0303_9
(1224 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|17551816|ref|NP_498922.1| putative nuclear protein, with a co... 674 0.0
gi|39581391|emb|CAE69288.1| Hypothetical protein CBG15343 [Caeno... 361 2e-98
gi|39584966|emb|CAE64390.1| Hypothetical protein CBG09080 [Caeno... 348 2e-94
gi|39584940|emb|CAE64364.1| Hypothetical protein CBG09051 [Caeno... 313 4e-84
gi|39584976|emb|CAE64400.1| Hypothetical protein CBG09091 [Caeno... 305 1e-81
gi|8163724|gb|AAF73826.1| surface protein PcpC [Streptococcus pn... 46 0.002
gi|8163718|gb|AAF73821.1| surface protein PspC [Streptococcus pn... 46 0.002
gi|8163649|gb|AAF73782.1| surface protein PspC [Streptococcus pn... 45 0.003
gi|29349227|ref|NP_812730.1| conserved hypothetical protein [Bac... 44 0.006
gi|49069760|ref|XP_399169.1| hypothetical protein UM01554.1 [Ust... 43 0.017
gi|38111683|gb|EAA57223.1| hypothetical protein MG08192.4 [Magna... 42 0.023
gi|26991657|ref|NP_747082.1| ATP-dependent RNA helicase, DEAD bo... 42 0.029
gi|15642032|ref|NP_231664.1| ribonuclease E [Vibrio cholerae O1 ... 42 0.038
gi|33591687|ref|NP_879331.1| ribonuclease E [Bordetella pertussi... 42 0.038
gi|16769850|gb|AAL29144.1| SD04745p [Drosophila melanogaster] 40 0.086
gi|33597842|ref|NP_885485.1| ribonuclease E [Bordetella parapert... 40 0.086
gi|33602744|ref|NP_890304.1| ribonuclease E [Bordetella bronchis... 40 0.086
gi|20066260|gb|AAM09367.1| similar to Dictyostelium discoideum (... 40 0.11
gi|9971154|dbj|BAB12429.1| mkpA [Dictyostelium discoideum] 40 0.15
gi|38085863|ref|XP_133185.3| similar to hypothetical protein FLJ... 39 0.19
gi|41059833|gb|AAR99384.1| surface protein BVH-11 [Streptococcus... 39 0.19
gi|23483514|gb|EAA19159.1| hypothetical protein [Plasmodium yoel... 39 0.25
gi|24580684|ref|NP_608540.1| CG2839-PA [Drosophila melanogaster]... 39 0.25
gi|17535725|ref|NP_494559.1| suppressor of Mec and Unc defects S... 39 0.33
gi|6110357|gb|AAF03786.1| Traf2 and NCK interacting kinase, spli... 38 0.43
gi|39589507|emb|CAE74536.1| Hypothetical protein CBG22293 [Caeno... 38 0.43
gi|38077770|ref|XP_130797.3| Traf2 and NCK interacting kinase-li... 38 0.43
gi|6110350|gb|AAF03783.1| Traf2 and NCK interacting kinase, spli... 38 0.43
gi|6110360|gb|AAF03787.1| Traf2 and NCK interacting kinase, spli... 38 0.43
gi|6110365|gb|AAF03789.1| Traf2 and NCK interacting kinase, spli... 38 0.43
gi|31209543|ref|XP_313738.1| ENSANGP00000016897 [Anopheles gambi... 38 0.56
gi|49119345|gb|AAH73454.1| Unknown (protein for MGC:80961) [Xeno... 38 0.56
gi|42733860|gb|AAS38778.1| similar to exonuclease ii [Schizosacc... 38 0.56
gi|13447094|gb|AAK26629.1| PhpA [Streptococcus pneumoniae] 37 0.73
gi|15903104|ref|NP_358654.1| Histidine Motif-Containing protein ... 37 0.73
gi|24585169|ref|NP_724173.1| CG31797-PA [Drosophila melanogaster... 37 0.73
gi|28828976|gb|AAO51556.1| similar to Plasmodium falciparum. Pro... 37 0.73
gi|15679883|ref|NP_277001.1| unknown [Methanothermobacter therma... 37 0.73
gi|37958000|gb|AAP37270.1| surface protein BVH-11 [Streptococcus... 37 0.73
gi|3089522|gb|AAC38407.1| gas vesicle protein GvpT [Bacillus meg... 37 0.95
gi|32565351|ref|NP_499576.2| carboxylesterase, type B (3N192) [C... 37 0.95
gi|37534740|ref|NP_921672.1| putative splicing factor-like prote... 37 0.95
gi|39580390|emb|CAE70949.1| Hypothetical protein CBG17759 [Caeno... 37 0.95
gi|23956062|ref|NP_035377.1| retinoblastoma binding protein 6 [M... 37 0.95
gi|28828998|gb|AAO51573.1| similar to Dictyostelium discoideum (... 37 0.95
gi|48780895|ref|ZP_00277558.1| COG1530: Ribonucleases G and E [B... 37 1.2
gi|23612979|ref|NP_704518.1| hypothetical protein [Plasmodium fa... 37 1.2
gi|24584968|ref|NP_609877.2| CG12750-PA [Drosophila melanogaster... 37 1.2
gi|18411393|ref|NP_565151.1| chromatin protein family [Arabidops... 37 1.2
gi|34392270|emb|CAE46396.1| Dd-STATb protein [Dictyostelium disc... 36 1.6
gi|23619351|ref|NP_705313.1| 40S ribosomal subunit protein S6, p... 36 1.6
gi|34868438|ref|XP_232942.2| similar to RIKEN cDNA 2610207I16 [R... 36 1.6
gi|7512711|pir||T12483 hypothetical protein DKFZp564B0769.1 - hu... 36 1.6
gi|140247|sp|Q00436|YB3_XENLA B BOX BINDING PROTEIN (YB3 PROTEIN... 36 1.6
gi|18642528|gb|AAL76164.1| SR rich protein [Homo sapiens] 36 1.6
gi|27503841|gb|AAH42217.1| Nsep1-prov protein [Xenopus laevis] 36 1.6
gi|23612443|ref|NP_704004.1| hypothetical protein [Plasmodium fa... 36 1.6
gi|18699724|ref|NP_116259.1| chromosome 6 open reading frame 111... 36 1.6
gi|48060202|gb|AAT39977.1| Hypothetical protein Y39G10AR.18a [Ca... 36 2.1
gi|26347809|dbj|BAC37553.1| unnamed protein product [Mus musculus] 36 2.1
gi|39596341|emb|CAE69979.1| Hypothetical protein CBG16377 [Caeno... 36 2.1
gi|25143613|ref|NP_740808.1| dot1l Histone Methyltransferase (1C... 36 2.1
gi|28828526|gb|AAO51134.1| similar to Dictyostelium discoideum (... 36 2.1
gi|3641609|gb|AAC36483.1| nucleolar basal body binding protein B... 36 2.1
gi|1546779|gb|AAB49620.1| PACT 36 2.1
gi|21358245|ref|NP_648724.1| CG13472-PA [Drosophila melanogaster... 36 2.1
gi|50286145|ref|XP_445501.1| unnamed protein product [Candida gl... 36 2.1
gi|334871|gb|AAA47795.1| gag protein [Simian foamy virus type 3] 36 2.1
gi|254751|gb|AAB23118.1| precursor [Chironomus tentans] 36 2.1
gi|30851332|gb|AAH52528.1| Rbbp6 protein [Mus musculus] 36 2.1
gi|120881|sp|P27400|GAG_SFV3L GAG POLYPROTEIN (CORE POLYPROTEIN)... 36 2.1
gi|3641611|gb|AAC36484.1| nucleolar basal body binding protein B... 36 2.1
gi|26988635|ref|NP_744060.1| ribonuclease E [Pseudomonas putida ... 36 2.1
gi|2230824|emb|CAA73551.1| STATa protein [Dictyostelium discoideum] 35 2.8
gi|28828777|gb|AAO51372.1| similar to Dictyostelium discoideum (... 35 2.8
gi|140245|sp|P21573|YB1_XENLA Nuclease sensitive element binding... 35 2.8
gi|32471674|ref|NP_864667.1| hypothetical protein-signal peptide... 35 2.8
gi|42522727|ref|NP_968107.1| conserved hypothetical protein [Bde... 35 2.8
gi|7489897|pir||T14577 protein kinase YakA (EC 2.7.1.-) - slime ... 35 2.8
gi|25009727|gb|AAN71038.1| AT07931p [Drosophila melanogaster] 35 2.8
gi|45521102|ref|ZP_00172624.1| COG1530: Ribonucleases G and E [M... 35 2.8
gi|23481184|gb|EAA17537.1| similar to elaC homolog 1 [Plasmodium... 35 3.6
gi|320937|pir||C44971 histidine-rich knob protein homolog KPRPC ... 35 3.6
gi|27370848|gb|AAH41191.1| MGC52597 protein [Xenopus laevis] 35 3.6
gi|49130367|ref|XP_412967.1| hypothetical protein AN8830.2 [Aspe... 35 3.6
gi|27382606|ref|NP_774135.1| bll7495 [Bradyrhizobium japonicum U... 35 3.6
gi|39585444|emb|CAE70527.1| Hypothetical protein CBG17156 [Caeno... 35 3.6
gi|28829487|gb|AAO52020.1| similar to Plasmodium falciparum. Hyp... 35 3.6
gi|31209367|ref|XP_313650.1| ENSANGP00000003674 [Anopheles gambi... 35 3.6
gi|50257968|gb|EAL20662.1| hypothetical protein CNBE0280 [Crypto... 35 3.6
gi|39588178|emb|CAE68103.1| Hypothetical protein CBG13743 [Caeno... 35 3.6
gi|49482520|ref|YP_039744.1| putative membrane protein [Staphylo... 35 3.6
gi|21281988|ref|NP_645074.1| ORFID:MW0259~hypothetical protein, ... 35 3.6
gi|15923273|ref|NP_370807.1| hypothetical protein SAV0283 [Staph... 35 3.6
gi|28828697|gb|AAO51294.1| similar to Dictyostelium discoideum (... 35 3.6
gi|31340735|ref|NP_852466.1| zinc finger protein 445; zinc finge... 35 3.6
gi|28828350|gb|AAL93017.2| hypothetical protein [Dictyostelium d... 35 4.7
gi|48855738|ref|ZP_00309896.1| COG1774: Uncharacterized homolog ... 35 4.7
gi|48102729|ref|XP_392804.1| similar to CG4266-PA [Apis mellifera] 35 4.7
gi|46125615|ref|XP_387361.1| hypothetical protein FG07185.1 [Gib... 35 4.7
gi|42733819|gb|AAS38737.1| similar to Dictyostelium discoideum (... 35 4.7
gi|49037494|gb|AAT49042.1| splice factor [Toxoplasma gondii] 35 4.7
gi|47229008|emb|CAG09523.1| unnamed protein product [Tetraodon n... 35 4.7
gi|50550401|ref|XP_502673.1| hypothetical protein [Yarrowia lipo... 35 4.7
gi|46228478|gb|EAK89348.1| hypothetical protein with glutamine r... 35 4.7
gi|46442819|gb|EAL02105.1| hypothetical protein CaO19.801 [Candi... 35 4.7
gi|14211584|dbj|BAB56110.1| vasa short form [Oreochromis niloticus] 34 6.1
gi|3913454|sp|P91699|DECA_DROPS Decapentaplegic protein precurso... 34 6.1
gi|23508231|ref|NP_700900.1| hypothetical protein [Plasmodium fa... 34 6.1
gi|27374214|gb|AAO00978.1| Surf6-PA [Drosophila erecta] 34 6.1
gi|40549389|gb|AAR87749.1| stem-loop binding protein [Lytechinus... 34 6.1
gi|114829|sp|P08726|BAR6_CHITE BALBIANI RING PROTEIN 6 (GIANT SE... 34 6.1
gi|15233413|ref|NP_195319.1| expressed protein [Arabidopsis thal... 34 6.1
gi|15598172|ref|NP_251666.1| ribonuclease E [Pseudomonas aerugin... 34 6.1
gi|42761540|gb|AAS45358.1| similar to Dictyostelium discoideum (... 34 6.1
gi|33874158|gb|AAH19000.1| Unknown (protein for IMAGE:3607400) [... 34 6.1
gi|32038047|ref|ZP_00136319.1| COG1530: Ribonucleases G and E [P... 34 6.1
gi|31982941|ref|NP_055885.2| KIAA0853 [Homo sapiens] >gnl|BL_ORD... 34 6.1
gi|45198762|ref|NP_985791.1| AFR244Cp [Eremothecium gossypii] >g... 34 6.1
gi|42522929|ref|NP_968309.1| ATP-dependent RNA helicase [Bdellov... 34 8.0
gi|46205649|ref|ZP_00209964.1| hypothetical protein Magn021176 [... 34 8.0
gi|46109630|ref|XP_381873.1| hypothetical protein FG01697.1 [Gib... 34 8.0
gi|13447096|gb|AAK26630.1| PhpA-79 [synthetic construct] 34 8.0
gi|8163662|gb|AAF73789.1| surface protein PspC [Streptococcus pn... 34 8.0
gi|48097882|ref|XP_393913.1| similar to ENSANGP00000017516 [Apis... 34 8.0
gi|42565046|ref|NP_188650.2| kinesin motor family protein [Arabi... 34 8.0
gi|27467863|ref|NP_764500.1| translation initiation factor IF-2 ... 34 8.0
gi|48767201|ref|ZP_00271561.1| COG1530: Ribonucleases G and E [R... 34 8.0
gi|23490242|gb|EAA22067.1| Drosophila melanogaster CG15040 gene ... 34 8.0
gi|15901039|ref|NP_345643.1| conserved domain protein [Streptoco... 34 8.0
gi|12744742|gb|AAK06759.1| pneumococcal histidine triad protein ... 34 8.0
gi|38109087|gb|EAA55009.1| hypothetical protein MG06666.4 [Magna... 34 8.0
gi|1082713|pir||A48133 pre-mRNA splicing SRp75 - human >gnl|BL_O... 34 8.0
gi|21389423|ref|NP_653217.1| hypothetical protein FLJ32416 [Homo... 34 8.0
gi|23613124|ref|NP_703446.1| hypothetical protein [Plasmodium fa... 34 8.0
gi|23479346|gb|EAA16201.1| ERYTHROCYTE MEMBRANE PROTEIN PFEMP3 [... 34 8.0
gi|9293972|dbj|BAB01875.1| unnamed protein product [Arabidopsis ... 34 8.0
gi|47218277|emb|CAF96314.1| unnamed protein product [Tetraodon n... 34 8.0
>gi|17551816|ref|NP_498922.1| putative nuclear protein, with a coiled
coil domain (46.7 kD) (3J804) [Caenorhabditis elegans]
gi|465700|sp|P34263|YKAD_CAEEL Hypothetical protein B0303.14 in
chromosome III
gi|283542|pir||S27794 hypothetical 46.7K protein - Caenorhabditis
elegans
gi|156200|gb|AAA27904.1| Hypothetical protein B0303.14
[Caenorhabditis elegans]
Length = 407
Score = 674 bits (1739), Expect = 0.0
Identities = 347/407 (85%), Positives = 347/407 (85%)
Frame = -1
Query: 1224 MSRLAGRVVFPGEAEPQXXXXXXXXXXXXXXSQETRQQNLANRFKPSNNYRSNRNQVEDG 1045
MSRLAGRVVFPGEAEPQ SQETRQQNLANRFKPSNNYRSNRNQVEDG
Sbjct: 1 MSRLAGRVVFPGEAEPQSSSTNSRAPESSSSSQETRQQNLANRFKPSNNYRSNRNQVEDG 60
Query: 1044 ETTNSNRGKPRGKGPIRYQGNYSDRFVGRQEEAPRAEKSERSERPQRSEKPQDQNQREQV 865
ETTNSNRGKPRGKGPIRYQGNYSDRFVGRQEEAPRAEKSERSERPQRSEKPQDQNQREQV
Sbjct: 61 ETTNSNRGKPRGKGPIRYQGNYSDRFVGRQEEAPRAEKSERSERPQRSEKPQDQNQREQV 120
Query: 864 KPQRKQTKRVENVVAXXXXXXXXXXXXXXXXLNVRNDRSAAQIKRNILGSHDLIDTMDED 685
KPQRKQTKRVENVVA LNVRNDRSAAQIKRNILGSHDLIDTMDED
Sbjct: 121 KPQRKQTKRVENVVASEELLELEDIIDQISDLNVRNDRSAAQIKRNILGSHDLIDTMDED 180
Query: 684 DWQKVCESMIKTALEQGEPEFIADLMVALFSNKLFAAVMSDELMKYVTKYIMEDDEMPIP 505
DWQKVCESMIKTALEQGEPEFIADLMVALFSNKLFAAVMSDELMKYVTKYIMEDDEMPIP
Sbjct: 181 DWQKVCESMIKTALEQGEPEFIADLMVALFSNKLFAAVMSDELMKYVTKYIMEDDEMPIP 240
Query: 504 SLLSAILCAHWPRQLAKAFDNINPILYTIVCLIKGWIEVVREDTXXXXXXXXXXXYQVAR 325
SLLSAILCAHWPRQLAKAFDNINPILYTIVCLIKGWIEVVREDT YQVAR
Sbjct: 241 SLLSAILCAHWPRQLAKAFDNINPILYTIVCLIKGWIEVVREDTERYYKEEKKPKYQVAR 300
Query: 324 EDSFXXXXXXXXXXXXXXXXXXXEMVNRCAVGLSDLCDTAQRQLWVNWMTVTDEIYQCIK 145
EDSF EMVNRCAVGLSDLCDTAQRQLWVNWMTVTDEIYQCIK
Sbjct: 301 EDSFEEPTPEPSKEEEEKIIEEPEMVNRCAVGLSDLCDTAQRQLWVNWMTVTDEIYQCIK 360
Query: 144 PSITHNPNITGSVKGRLLDTFLQMNQWTKNRTASVKHAVTQTVGTSN 4
PSITHNPNITGSVKGRLLDTFLQMNQWTKNRTASVKHAVTQTVGTSN
Sbjct: 361 PSITHNPNITGSVKGRLLDTFLQMNQWTKNRTASVKHAVTQTVGTSN 407