Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= 331a11
(376 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|11466199|ref|NP_066522.1| ribosomal protein S3 [Naegleria gru... 35 0.46
gi|23613134|ref|NP_703456.1| stearoyl-CoA desaturase (acyl-CoA d... 33 1.7
gi|11466594|ref|NP_066484.1| SecY-independent transporter protei... 32 3.0
gi|23613407|ref|NP_703251.1| hypothetical protein [Plasmodium fa... 32 3.9
gi|33860890|ref|NP_892451.1| possible Rhomboid family [Prochloro... 31 5.1
gi|23480244|gb|EAA16858.1| ribosomal protein var1, putative [Pla... 31 6.6
gi|18309106|ref|NP_561040.1| hypothetical protein CPE0124 [Clost... 31 6.6
>gi|11466199|ref|NP_066522.1| ribosomal protein S3 [Naegleria
gruberi]
gi|10444234|gb|AAG17800.1| ribosomal protein S3 [Naegleria gruberi]
Length = 523
Score = 34.7 bits (78), Expect = 0.46
Identities = 30/80 (37%), Positives = 42/80 (52%), Gaps = 10/80 (12%)
Frame = +2
Query: 53 CFILKIIFIRVDMSTFVITVFI--FILENYILYNYF---RKFK--I*SVLNLCFTTFS*F 211
CF +K+ V + F I + F ++ Y+LYN+F RKFK I S + F S F
Sbjct: 66 CFYIKV---NVYLYKFQIKKYFLSFFIDQYLLYNFFLKKRKFKHIISSSFSNTFYISSIF 122
Query: 212 YL---SLIFNLIKFY*INNL 262
YL +L FN FY +N+L
Sbjct: 123 YLNANNLFFNFFSFY-LNSL 141