Homology by BLASTX


BLASTX 2.2.4 [Aug-26-2002]
Query= 309h6
         (360 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|17532697|ref|NP_494306.1| putative membrane protein, with a c...    45   3e-04
gi|29246860|gb|EAA38441.1| GLP_191_17152_14510 [Giardia lamblia ...    34   0.80
gi|15723144|emb|CAA23015.1| topoisomerase I alpha [Takifugu rubr...    33   1.0
gi|39592266|emb|CAE75487.1| Hypothetical protein CBG23491 [Caeno...    33   1.4
gi|32475211|ref|NP_868205.1| hypothetical protein RB8132 [Pirell...    32   3.0
gi|7494317|pir||E71606 hypothetical protein PFB0765w - malaria p...    31   5.2
gi|23593319|ref|NP_703169.1| hypothetical protein [Plasmodium fa...    31   5.2
gi|12018294|ref|NP_072137.1| DNA topoisomerase I [Rattus norvegi...    30   8.8
gi|45187924|ref|NP_984147.1| ADR051Cp [Eremothecium gossypii] >g...    30   8.8
gi|17540760|ref|NP_500434.1| predicted CDS, putative endoplasmic...    30   8.8


>gi|17532697|ref|NP_494306.1| putative membrane protein, with a
           coiled coil-4 domain (2C903) [Caenorhabditis elegans]
 gi|7498223|pir||T31979 hypothetical protein D2062.7 -
           Caenorhabditis elegans
 gi|2315606|gb|AAB66068.1| Hypothetical protein D2062.7
           [Caenorhabditis elegans]
          Length = 134

 Score = 45.4 bits (106), Expect = 3e-04
 Identities = 27/77 (35%), Positives = 43/77 (55%)
 Frame = +2

Query: 29  MDEEFDKKVAKMNNDHDKKVAKNNEAYDKAVAEQKSMWDKFLAYGTAXXXXXXXXPILIS 208
           M++ F+KK A+M  + ++ +AK  +  +K     K ++ K LAYG A         +  S
Sbjct: 46  MEDAFNKKKAEMVKNSEEDMAKMEKEREK----NKGIFAKILAYGLATVIVTFVVCVGAS 101

Query: 209 IAASVITCILVRRCNRN 259
            AA++IT + VRR NRN
Sbjct: 102 AAATIITIVCVRRHNRN 118




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