Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= 309h6
(360 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|17532697|ref|NP_494306.1| putative membrane protein, with a c... 45 3e-04
gi|29246860|gb|EAA38441.1| GLP_191_17152_14510 [Giardia lamblia ... 34 0.80
gi|15723144|emb|CAA23015.1| topoisomerase I alpha [Takifugu rubr... 33 1.0
gi|39592266|emb|CAE75487.1| Hypothetical protein CBG23491 [Caeno... 33 1.4
gi|32475211|ref|NP_868205.1| hypothetical protein RB8132 [Pirell... 32 3.0
gi|7494317|pir||E71606 hypothetical protein PFB0765w - malaria p... 31 5.2
gi|23593319|ref|NP_703169.1| hypothetical protein [Plasmodium fa... 31 5.2
gi|12018294|ref|NP_072137.1| DNA topoisomerase I [Rattus norvegi... 30 8.8
gi|45187924|ref|NP_984147.1| ADR051Cp [Eremothecium gossypii] >g... 30 8.8
gi|17540760|ref|NP_500434.1| predicted CDS, putative endoplasmic... 30 8.8
>gi|17532697|ref|NP_494306.1| putative membrane protein, with a
coiled coil-4 domain (2C903) [Caenorhabditis elegans]
gi|7498223|pir||T31979 hypothetical protein D2062.7 -
Caenorhabditis elegans
gi|2315606|gb|AAB66068.1| Hypothetical protein D2062.7
[Caenorhabditis elegans]
Length = 134
Score = 45.4 bits (106), Expect = 3e-04
Identities = 27/77 (35%), Positives = 43/77 (55%)
Frame = +2
Query: 29 MDEEFDKKVAKMNNDHDKKVAKNNEAYDKAVAEQKSMWDKFLAYGTAXXXXXXXXPILIS 208
M++ F+KK A+M + ++ +AK + +K K ++ K LAYG A + S
Sbjct: 46 MEDAFNKKKAEMVKNSEEDMAKMEKEREK----NKGIFAKILAYGLATVIVTFVVCVGAS 101
Query: 209 IAASVITCILVRRCNRN 259
AA++IT + VRR NRN
Sbjct: 102 AAATIITIVCVRRHNRN 118