Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= 232d4
(377 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|17508509|ref|NP_493176.1| DNA PRImase homolog (58.3 kD) (pri-... 146 3e-38
gi|39580725|emb|CAE64111.1| Hypothetical protein CBG08720 [Caeno... 107 2e-24
gi|34874606|ref|XP_217375.2| similar to DNA polymerase alpha sub... 53 2e-06
gi|34395744|sp|O89044|PRI2_RAT DNA primase large subunit (DNA pr... 53 2e-06
gi|47550859|ref|NP_999947.1| primase, polypeptide 2A, 58kDa [Dan... 52 2e-06
gi|442472|dbj|BAA04203.1| DNA primase large subunit p58 [Mus mus... 52 2e-06
gi|6679461|ref|NP_032948.1| DNA primase, p58 subunit [Mus muscul... 52 2e-06
gi|13358936|dbj|BAB33081.1| hypothetical protein [Macaca fascicu... 52 2e-06
gi|1346793|sp|P49643|PRI2_HUMAN DNA primase large subunit (DNA p... 51 6e-06
gi|41349495|ref|NP_000938.2| DNA primase large subunit, 58kDa; D... 51 6e-06
gi|47228918|emb|CAG09433.1| unnamed protein product [Tetraodon n... 49 2e-05
gi|50744830|ref|XP_419895.1| PREDICTED: similar to DNA primase l... 47 9e-05
gi|31217416|ref|XP_316421.1| ENSANGP00000004257 [Anopheles gambi... 41 0.006
gi|49074702|ref|XP_401467.1| hypothetical protein UM03852.1 [Ust... 40 0.014
gi|50292827|ref|XP_448846.1| unnamed protein product [Candida gl... 39 0.024
gi|50255800|gb|EAL18532.1| hypothetical protein CNBJ1740 [Crypto... 39 0.024
gi|50310557|ref|XP_455298.1| unnamed protein product [Kluyveromy... 36 0.16
gi|50510201|dbj|BAD31369.1| putative DNA primase large subunit [... 35 0.27
gi|50510202|dbj|BAD31370.1| putative DNA primase large subunit [... 35 0.27
gi|6322806|ref|NP_012879.1| Subunit of DNA primase, which is req... 35 0.46
gi|42563014|ref|NP_564893.2| DNA primase, large subunit family [... 34 0.60
gi|27808614|gb|AAO24587.1| At1g67320 [Arabidopsis thaliana] 34 0.60
gi|34395762|sp|Q84WJ2|PRI2_ARATH Probable DNA primase large subu... 34 0.60
gi|25404955|pir||G96696 protein F1N21.14 [imported] - Arabidopsi... 34 0.60
gi|25336973|pir||G87948 protein W02D9.1 [imported] - Caenorhabdi... 33 1.0
gi|23483206|gb|EAA18951.1| DNA primase large subunit [Plasmodium... 33 1.3
gi|5679048|gb|AAD46835.1| GM13640p [Drosophila melanogaster] 33 1.3
gi|24667411|ref|NP_652001.2| CG5553-PA [Drosophila melanogaster]... 33 1.3
gi|23613628|ref|NP_704649.1| DNA primase, large subunit, putativ... 33 1.3
gi|50412320|ref|XP_457125.1| unnamed protein product [Debaryomyc... 32 2.3
gi|49084390|ref|XP_404397.1| hypothetical protein AN0260.2 [Aspe... 32 2.3
gi|23014343|ref|ZP_00054164.1| COG0404: Glycine cleavage system ... 32 3.0
gi|38049615|ref|XP_136686.3| similar to chromosome 20 open readi... 31 5.1
gi|50255525|gb|EAL18260.1| hypothetical protein CNBK2780 [Crypto... 31 6.6
gi|39580046|emb|CAE71572.1| Hypothetical protein CBG18524 [Caeno... 31 6.6
gi|47825406|ref|NP_001001478.1| complement related-long precurso... 30 8.6
>gi|17508509|ref|NP_493176.1| DNA PRImase homolog (58.3 kD) (pri-2)
[Caenorhabditis elegans]
gi|14917028|sp|O02334|PRI2_CAEEL Probable DNA primase large subunit
gi|7508838|pir||T26114 hypothetical protein W02D9.1 -
Caenorhabditis elegans
gi|5824647|emb|CAB03469.2| C. elegans PRI-2 protein (corresponding
sequence W02D9.1) [Caenorhabditis elegans]
Length = 503
Score = 146 bits (368), Expect(2) = 3e-38
Identities = 71/72 (98%), Positives = 72/72 (99%)
Frame = -1
Query: 242 QIAELAELNQYDKACTRYFEFMHNLEEGGLGQLITHPNQFYEESQKIVAERIAAKQESQE 63
+IAELAELNQYDKACTRYFEFMHNLEEGGLGQLITHPNQFYEESQKIVAERIAAKQESQE
Sbjct: 432 RIAELAELNQYDKACTRYFEFMHNLEEGGLGQLITHPNQFYEESQKIVAERIAAKQESQE 491
Query: 62 APAPKIEKMDTE 27
APAPKIEKMDTE
Sbjct: 492 APAPKIEKMDTE 503
Score = 33.1 bits (74), Expect(2) = 3e-38
Identities = 15/16 (93%), Positives = 16/16 (99%)
Frame = -3
Query: 375 KLGSDAILKKEQIERV 328
KLGSDAILKKEQIER+
Sbjct: 418 KLGSDAILKKEQIERI 433